RLG00000005023

transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0004415
Physical Location & Seq
Forward (+)
64403460 .. 64407699
4240 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000005023

Sequence Viewer

Length: 1713 bp
ATGGAGCTGCCACAGCCCCGTCCGTTTGGAGGCGAAGGAGGAAGAAAACCAACGCATGACTTTCTGTCGTTGTACACTAGTCATTCAACTGCCCAACAAGATCCAATACCACCTTCTCAAGGAGGTTATCTAGAAACTCATGATTTTCTACAGCCACTTGAACGAATGGGAAAGACCTGTGCCAAAGAAGAAACCTCGGTTGAGATCATATCACCAAGTAGAAGTAGTGTTGAAAAGCCGCCATGTGTGGCGCAACGGCCAACTTCTGTGGAGCACATTCTTCCAGGTGGGATTGGGACTTACAGTATAAGCCACATTTCGTATTTTAATCAAAGGGTTCCAAAACCAGAGGAAAACGTATTCCCGGTTGCTCCTCAAGCAAGTAGTACCCATGAAAGGAATGATGAAAACTCAAACTGCAGTTCTTATGCCGGAAGTGGTTTCACTTTGTGGGACGAATCTGCAGCAATGAAGGGAAAGGCAGGGAAGGAGAATGTGGTGGAAAGACCAGGTTTAAGAGGGCAATGGACATCGTCAGAGAGGCCATCACAGTCATCTTCCACTAACAACCGCAACTGCTTCAGCTCTCAGTCATCTGGGCAGAAGAACCTGAGCTTCATGGAGATGATGAAGTCCGCTGCCAAGGGTTGCACCCAGGAAGAAGAACTTGACAATGAGGAAGAGTTTGCTCTGAAAAAGGAGATGTCAACTACTACTACCACTGCCACTACCCCCAACAACGGAGAATTACGGGTTAAGGTTGATGTTAAGAGCTCTGATCAGAAAGCTAACACGCCACGATCCAAACATTCTGCCACTGAACAGCGAAGGAGGAGTAAAATAAATGACAGATTCCAAATGTTGAGAGAGCTCATTCCTCATAGTGATCAAAAGAGAGACAAGGCATCATTTCTATTAGAGGTTATTGAATACATTCAGTATTTACAGGAAAAAGTAACCAAGTATGAGGGCCCATACCAAGGTTGGAACCATGATCCAGCAAAATTGATGCCTTGGGGAAACAACAAGCTTGGGGAAAGTTACTGTGATCAATCTCGAGGTATGAATGGTGGATCTGGTCCTGCATTAGTGTTTGCTGCTGCAAAATTTGAGGAGAAAACTACTTCAGTGTCTCCTACTATTCCTGGAAGTGCTCAGAACCTGGTAGAATCTGATACGAGTACTGAAACTACATTCGGAGCTAAGGATTACCCCAATGGAATAACAAACAAGGCAAATCCCTTTCCTCTGTCAATGCAGTCGAACTTCTCGACACCTGTCAGAAGTGGTAGTGCAGCACCTCATCTTCCACCTAGATTGCCATCTGATGCAGAGAACACATCATCTCATCCTCGCTCCATGTTATTCCCGACAAAATCATGTACTGCTGATGCTGGTGCCATTAGTGATAAGCTAAAAGAACATGAACTTACAATTGAAGGTGGAAGAATTAACATCTCAAGTGCGTACTCTCAAGGGTTATTAAATACTCTTACACAAGCCCTGCAGAATTCTGGTGTGGATTTGTCACAGGCCAGCATCTCGGTGCAAATCGAGCTTGGGAAGCAAGCGTGTAGTAGAACGGCTATACCCAAATCCATTGTCAAGGAAAATGAGATTCCCTCTATGACTCCAGGGAAAAAGCACCCTAGAATTTCAGTTGGTGAAGACTCAGAACAAGCCCAAAAGAAGCTCAGGACAGGCAGACACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HLH

Protein Analysis

571

Amino Acids

62.43

Weight (kDa)

7.23

Isoelectric Point (pI)

53.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HLH PF00010 267 - 316 2e-16 Helix-loop-helix DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1397
AciI CCGC 3 cut(s) 239, 571, 636
AclWI GGATC 4 cut(s) 95, 795, 989, 1081
AcoI YGGCCR 1 cut(s) 257
AcsI RAATTY 3 cut(s) 1106, 1510, 1653
AcuI CTGAAG 2 cut(s) 565, 1110
AdeI CACNNNGTG 1 cut(s) 450
AfaI GTAC 5 cut(s) 74, 388, 1183, 1384, 1469
AfiI CCNNNNNNNGG 5 cut(s) 29, 119, 396, 740, 980
AgsI TTSAA 5 cut(s) 87, 161, 233, 929, 1439
AhdI GACNNNNNGTC 1 cut(s) 64
AhlI ACTAGT 1 cut(s) 77
AjnI CCWGG 6 cut(s) 283, 508, 654, 1144, 1161, 1633
AjuI GAANNNNNNNTTGG 2 cut(s) 97, 129
Alw21I GWGCWC 4 cut(s) 276, 776, 873, 1156
Alw26I GTCTC 2 cut(s) 891, 1137
AlwI GGATC 4 cut(s) 95, 795, 989, 1081
AlwNI CAGNNNCTG 1 cut(s) 1162
Ama87I CYCGRG 1 cut(s) 1056
AoxI GGCC 4 cut(s) 257, 542, 970, 1533
ApaI GGGCCC 1 cut(s) 974
ApeKI GCWGC 6 cut(s) 7, 464, 638, 1097, 1100, 1295
ApoI RAATTY 3 cut(s) 1106, 1510, 1653
ArsI GACNNNNNNTTYG 2 cut(s) 1587, 1619
Asp700I GAANNNNTTC 1 cut(s) 933
AspLEI GCGC 1 cut(s) 253
AspS9I GGNCC 3 cut(s) 970, 971, 1079
AsuC2I CCSGG 1 cut(s) 365
AsuHPI GGTGA 2 cut(s) 204, 1676
AvaI CYCGRG 1 cut(s) 1056
AvaII GGWCC 1 cut(s) 1079
BaeGI GKGCMC 1 cut(s) 974
BanI GGYRCC 1 cut(s) 1397
BanII GRGCYC 3 cut(s) 776, 873, 974
BbsI GAAGAC 1 cut(s) 1674
Bbv12I GWGCWC 4 cut(s) 276, 776, 873, 1156
BbvI GCAGC 5 cut(s) 476, 625, 1084, 1087, 1307
BccI CCATC 2 cut(s) 553, 1330
BceAI ACGGC 2 cut(s) 272, 1599
BciT130I CCWGG 6 cut(s) 285, 510, 656, 1146, 1163, 1635
BclI TGATCA 3 cut(s) 778, 886, 1048
BcnI CCSGG 1 cut(s) 365
BcoDI GTCTC 2 cut(s) 891, 1137
BcuI ACTAGT 1 cut(s) 77
BfaI CTAG 4 cut(s) 78, 131, 1314, 1650
BfmI CTRYAG 4 cut(s) 149, 418, 462, 1505
BisI GCNGC 7 cut(s) 8, 239, 465, 639, 1098, 1101, 1296
BlsI GCNGC 7 cut(s) 9, 240, 466, 640, 1099, 1102, 1297
BmcAI AGTACT 1 cut(s) 1183
Bme1390I CCNGG 7 cut(s) 285, 365, 510, 656, 1146, 1163, 1635
Bme18I GGWCC 1 cut(s) 1079
BmeRI GACNNNNNGTC 1 cut(s) 64
BmeT110I CYCGRG 1 cut(s) 1056
BmgT120I GGNCC 3 cut(s) 970, 971, 1079
BmiI GGNNCC 4 cut(s) 339, 972, 989, 1399
BmrFI CCNGG 7 cut(s) 285, 365, 510, 656, 1146, 1163, 1635
BmsI GCATC 5 cut(s) 914, 999, 1318, 1381, 1548
BoxI GACNNNNGTC 1 cut(s) 1277
BpiI GAAGAC 1 cut(s) 1674
BplI GAGNNNNNCTC 2 cut(s) 1607, 1639
BpmI CTGGAG 1 cut(s) 1617
Bpu10I CCTNAGC 3 cut(s) 611, 1203, 1694
BpuEI CTTGAG 4 cut(s) 102, 360, 1444, 1458
BpuMI CCSGG 1 cut(s) 365
BsaBI GATNNNNATC 1 cut(s) 1321
BsaJI CCNNGG 6 cut(s) 195, 642, 654, 979, 1013, 1634
Bsc4I CCNNNNNNNGG 5 cut(s) 29, 119, 396, 740, 980
Bse3DI GCAATG 2 cut(s) 474, 530
Bse8I GATNNNNATC 1 cut(s) 1321
BseBI CCWGG 6 cut(s) 285, 510, 656, 1146, 1163, 1635
BseDI CCNNGG 6 cut(s) 195, 642, 654, 979, 1013, 1634
BseGI GGATG 1 cut(s) 1348
BseJI GATNNNNATC 1 cut(s) 1321
BseLI CCNNNNNNNGG 5 cut(s) 29, 119, 396, 740, 980
BseMI GCAATG 2 cut(s) 474, 530
BseMII CTCAG 5 cut(s) 602, 602, 1169, 1686, 1708
BseRI GAGGAG 3 cut(s) 363, 847, 1127
BseSI GKGCMC 1 cut(s) 974
BseXI GCAGC 5 cut(s) 476, 625, 1084, 1087, 1307
BsgI GTGCAG 1 cut(s) 1314
BshFI GGCC 4 cut(s) 259, 544, 972, 1535
BshNI GGYRCC 1 cut(s) 1397
BsiHKAI GWGCWC 4 cut(s) 276, 776, 873, 1156
BsiHKCI CYCGRG 1 cut(s) 1056
BsiSI CCGG 2 cut(s) 365, 432
BslFI GGGAC 2 cut(s) 310, 467
BslI CCNNNNNNNGG 5 cut(s) 29, 119, 396, 740, 980
BsmAI GTCTC 2 cut(s) 891, 1137
BsmFI GGGAC 2 cut(s) 310, 467
BsnI GGCC 4 cut(s) 259, 544, 972, 1535
BsoBI CYCGRG 1 cut(s) 1056
Bsp120I GGGCCC 1 cut(s) 970
Bsp1286I GDGCHC 5 cut(s) 276, 776, 873, 974, 1156
Bsp1407I TGTACA 1 cut(s) 72
Bsp143I GATC 8 cut(s) 100, 204, 778, 800, 886, 994, 1048, 1073
BspACI CCGC 3 cut(s) 239, 571, 636
BspANI GGCC 4 cut(s) 259, 544, 972, 1535
BspCNI CTCAG 5 cut(s) 601, 603, 1168, 1685, 1707
BspHI TCATGA 1 cut(s) 139
BspLI GGNNCC 4 cut(s) 339, 972, 989, 1399
BspMAI CTGCAG 3 cut(s) 422, 466, 1509
BspPI GGATC 4 cut(s) 95, 795, 989, 1081
BspT107I GGYRCC 1 cut(s) 1397
BsrDI GCAATG 2 cut(s) 474, 530
BsrGI TGTACA 1 cut(s) 72
BssECI CCNNGG 6 cut(s) 195, 642, 654, 979, 1013, 1634
BssMI GATC 8 cut(s) 100, 204, 778, 800, 886, 994, 1048, 1073
BssT1I CCWWGG 3 cut(s) 642, 979, 1013
Bst2UI CCWGG 6 cut(s) 285, 510, 656, 1146, 1163, 1635
Bst4CI ACNGT 3 cut(s) 305, 552, 1046
Bst6I CTCTTC 1 cut(s) 675
BstAUI TGTACA 1 cut(s) 72
BstC8I GCNNGC 2 cut(s) 1537, 1569
BstDEI CTNAG 6 cut(s) 588, 611, 1155, 1203, 1672, 1694
BstENI CCTNNNNNAGG 1 cut(s) 117
BstF5I GGATG 1 cut(s) 1348
BstHHI GCGC 1 cut(s) 253
BstKTI GATC 8 cut(s) 103, 207, 781, 803, 889, 997, 1051, 1076
BstMAI GTCTC 2 cut(s) 891, 1137
BstMBI GATC 8 cut(s) 100, 204, 778, 800, 886, 994, 1048, 1073
BstMWI GCNNNNNNNGC 4 cut(s) 13, 377, 1555, 1564
BstNI CCWGG 6 cut(s) 285, 510, 656, 1146, 1163, 1635
BstPAI GACNNNNGTC 1 cut(s) 1277
BstSCI CCNGG 7 cut(s) 283, 363, 508, 654, 1144, 1161, 1633
BstSFI CTRYAG 4 cut(s) 149, 418, 462, 1505
BstSLI GKGCMC 1 cut(s) 974
BstV1I GCAGC 5 cut(s) 476, 625, 1084, 1087, 1307
BstV2I GAAGAC 1 cut(s) 1674
BstX2I RGATCY 2 cut(s) 100, 1073
BstYI RGATCY 2 cut(s) 100, 1073
BsuRI GGCC 4 cut(s) 259, 544, 972, 1535
BtsCI GGATG 1 cut(s) 1348
BtsI GCAGTG 1 cut(s) 720
BtsIMutI CAGTG 3 cut(s) 720, 816, 1134
Cac8I GCNNGC 2 cut(s) 1537, 1569
CaiI CAGNNNCTG 1 cut(s) 1162
CciI TCATGA 1 cut(s) 139
CfoI GCGC 1 cut(s) 253
Cfr13I GGNCC 3 cut(s) 970, 971, 1079
CsiI ACCWGGT 2 cut(s) 508, 1161
Csp6I GTAC 5 cut(s) 73, 387, 1182, 1383, 1468
CspCI CAANNNNNGTGG 4 cut(s) 249, 284, 1299, 1334
CviAII CATG 9 cut(s) 56, 140, 243, 392, 619, 992, 1360, 1380, 1424
CviQI GTAC 5 cut(s) 73, 387, 1182, 1383, 1468
DdeI CTNAG 6 cut(s) 588, 611, 1155, 1203, 1672, 1694
DpnI GATC 8 cut(s) 102, 206, 780, 802, 888, 996, 1050, 1075
DpnII GATC 8 cut(s) 100, 204, 778, 800, 886, 994, 1048, 1073
DraIII CACNNNGTG 1 cut(s) 450
DriI GACNNNNNGTC 1 cut(s) 64
EaeI YGGCCR 1 cut(s) 257
Eam1104I CTCTTC 1 cut(s) 675
Eam1105I GACNNNNNGTC 1 cut(s) 64
EarI CTCTTC 1 cut(s) 675
Ecl136II GAGCTC 2 cut(s) 774, 871
Eco130I CCWWGG 3 cut(s) 642, 979, 1013
Eco24I GRGCYC 3 cut(s) 776, 873, 974
Eco47I GGWCC 1 cut(s) 1079
Eco53kI GAGCTC 2 cut(s) 774, 871
Eco57I CTGAAG 2 cut(s) 565, 1110
Eco88I CYCGRG 1 cut(s) 1056
EcoICRI GAGCTC 2 cut(s) 774, 871
EcoNI CCTNNNNNAGG 1 cut(s) 117
EcoO109I RGGNCCY 1 cut(s) 970
EcoRI GAATTC 1 cut(s) 1510
EcoRII CCWGG 6 cut(s) 283, 508, 654, 1144, 1161, 1633
EcoT14I CCWWGG 3 cut(s) 642, 979, 1013
EcoT38I GRGCYC 3 cut(s) 776, 873, 974
ErhI CCWWGG 3 cut(s) 642, 979, 1013
FaeI CATG 9 cut(s) 59, 143, 246, 395, 622, 995, 1363, 1383, 1427
FalI AAGNNNNNCTT 2 cut(s) 651, 683
FaqI GGGAC 2 cut(s) 310, 467
FatI CATG 9 cut(s) 55, 139, 242, 391, 618, 991, 1359, 1379, 1423
FbaI TGATCA 3 cut(s) 778, 886, 1048
Fnu4HI GCNGC 7 cut(s) 8, 239, 465, 639, 1098, 1101, 1296
FokI GGATG 1 cut(s) 1335
FriOI GRGCYC 3 cut(s) 776, 873, 974
Fsp4HI GCNGC 7 cut(s) 8, 239, 465, 639, 1098, 1101, 1296
FspBI CTAG 4 cut(s) 78, 131, 1314, 1650
GlaI GCGC 1 cut(s) 252
GluI GCNGC 7 cut(s) 8, 239, 465, 639, 1098, 1101, 1296
GsuI CTGGAG 1 cut(s) 1617
HaeIII GGCC 4 cut(s) 259, 544, 972, 1535
HapII CCGG 2 cut(s) 365, 432
HhaI GCGC 1 cut(s) 253
Hin1II CATG 9 cut(s) 59, 143, 246, 395, 622, 995, 1363, 1383, 1427
Hin6I GCGC 1 cut(s) 251
HinP1I GCGC 1 cut(s) 251
HincII GTYRAC 1 cut(s) 708
HindII GTYRAC 1 cut(s) 708
HindIII AAGCTT 1 cut(s) 1028
HinfI GANTC 6 cut(s) 458, 852, 1169, 1618, 1630, 1670
HpaII CCGG 2 cut(s) 365, 432
HphI GGTGA 2 cut(s) 204, 1676
Hpy166II GTNNAC 2 cut(s) 75, 708
Hpy188III TCNNGA 6 cut(s) 131, 140, 1056, 1270, 1369, 1696
Hpy8I GTNNAC 2 cut(s) 75, 708
HpyAV CCTTC 6 cut(s) 29, 123, 466, 481, 822, 1433
HpyCH4III ACNGT 3 cut(s) 305, 552, 1046
HpyCH4IV ACGT 1 cut(s) 357
HpyF10VI GCNNNNNNNGC 4 cut(s) 13, 377, 1555, 1564
HpyF3I CTNAG 6 cut(s) 588, 611, 1155, 1203, 1672, 1694
HpySE526I ACGT 1 cut(s) 357
Hsp92II CATG 9 cut(s) 59, 143, 246, 395, 622, 995, 1363, 1383, 1427
HspAI GCGC 1 cut(s) 251
Ksp22I TGATCA 3 cut(s) 778, 886, 1048
Kzo9I GATC 8 cut(s) 100, 204, 778, 800, 886, 994, 1048, 1073
LmnI GCTCC 5 cut(s) 4, 271, 376, 1199, 1361
Lsp1109I GCAGC 5 cut(s) 476, 625, 1084, 1087, 1307
LweI GCATC 5 cut(s) 914, 999, 1318, 1381, 1548
MabI ACCWGGT 2 cut(s) 508, 1161
MaeI CTAG 4 cut(s) 78, 131, 1314, 1650
MaeII ACGT 1 cut(s) 357
MaeIII GTNAC 3 cut(s) 955, 1040, 1527
MalI GATC 8 cut(s) 102, 206, 780, 802, 888, 996, 1050, 1075
MboI GATC 8 cut(s) 100, 204, 778, 800, 886, 994, 1048, 1073
MfeI CAATTG 1 cut(s) 1434
MflI RGATCY 2 cut(s) 100, 1073
MhlI GDGCHC 5 cut(s) 276, 776, 873, 974, 1156
MluCI AATT 7 cut(s) 746, 1004, 1106, 1434, 1449, 1510, 1653
MlyI GAGTC 2 cut(s) 1624, 1664
MmeI TCCRAC 1 cut(s) 965
MroXI GAANNNNTTC 1 cut(s) 933
MseI TTAA 6 cut(s) 327, 515, 756, 768, 1452, 1484
MslI CAYNNNNRTG 2 cut(s) 623, 1544
MspA1I CMGCKG 1 cut(s) 638
MspI CCGG 2 cut(s) 365, 432
MspR9I CCNGG 7 cut(s) 285, 365, 510, 656, 1146, 1163, 1635
MunI CAATTG 1 cut(s) 1434
MvaI CCWGG 6 cut(s) 285, 510, 656, 1146, 1163, 1635
MwoI GCNNNNNNNGC 4 cut(s) 13, 377, 1555, 1564
NciI CCSGG 1 cut(s) 365
NdeII GATC 8 cut(s) 100, 204, 778, 800, 886, 994, 1048, 1073
NlaIII CATG 9 cut(s) 59, 143, 246, 395, 622, 995, 1363, 1383, 1427
NlaIV GGNNCC 4 cut(s) 339, 972, 989, 1399
NmuCI GTSAC 1 cut(s) 1527
PaeR7I CTCGAG 1 cut(s) 1056
PagI TCATGA 1 cut(s) 139
PcsI WCGNNNNNNNCGW 1 cut(s) 1268
PdmI GAANNNNTTC 1 cut(s) 933
PfeI GAWTC 4 cut(s) 458, 852, 1169, 1618
PflFI GACNNNGTC 1 cut(s) 532
PfoI TCCNGGA 1 cut(s) 1144
PkrI GCNGC 7 cut(s) 9, 240, 466, 640, 1099, 1102, 1297
PleI GAGTC 2 cut(s) 1624, 1664
PpsI GAGTC 2 cut(s) 1624, 1664
PshAI GACNNNNGTC 1 cut(s) 1277
Psp124BI GAGCTC 2 cut(s) 776, 873
Psp6I CCWGG 6 cut(s) 283, 508, 654, 1144, 1161, 1633
PspGI CCWGG 6 cut(s) 283, 508, 654, 1144, 1161, 1633
PspN4I GGNNCC 4 cut(s) 339, 972, 989, 1399
PspOMI GGGCCC 1 cut(s) 970
PspPI GGNCC 3 cut(s) 970, 971, 1079
PstI CTGCAG 3 cut(s) 422, 466, 1509
PstNI CAGNNNCTG 1 cut(s) 1162
PsuI RGATCY 2 cut(s) 100, 1073
PsyI GACNNNGTC 1 cut(s) 532
RsaI GTAC 5 cut(s) 74, 388, 1183, 1384, 1469
RsaNI GTAC 5 cut(s) 73, 387, 1182, 1383, 1468
RseI CAYNNNNRTG 2 cut(s) 623, 1544
SacI GAGCTC 2 cut(s) 776, 873
SaqAI TTAA 6 cut(s) 327, 515, 756, 768, 1452, 1484
SatI GCNGC 7 cut(s) 8, 239, 465, 639, 1098, 1101, 1296
Sau3AI GATC 8 cut(s) 100, 204, 778, 800, 886, 994, 1048, 1073
Sau96I GGNCC 3 cut(s) 970, 971, 1079
ScaI AGTACT 1 cut(s) 1183
SchI GAGTC 2 cut(s) 1624, 1664
ScrFI CCNGG 7 cut(s) 285, 365, 510, 656, 1146, 1163, 1635
SduI GDGCHC 5 cut(s) 276, 776, 873, 974, 1156
SexAI ACCWGGT 2 cut(s) 508, 1161
SfaNI GCATC 5 cut(s) 914, 999, 1318, 1381, 1548
SfcI CTRYAG 4 cut(s) 149, 418, 462, 1505
Sfr274I CTCGAG 1 cut(s) 1056
SinI GGWCC 1 cut(s) 1079
SlaI CTCGAG 1 cut(s) 1056
SmiMI CAYNNNNRTG 2 cut(s) 623, 1544
SmlI CTYRAG 5 cut(s) 117, 375, 1056, 1459, 1473
SmoI CTYRAG 5 cut(s) 117, 375, 1056, 1459, 1473
SpeI ACTAGT 1 cut(s) 77
Sse9I AATT 7 cut(s) 746, 1004, 1106, 1434, 1449, 1510, 1653
SsiI CCGC 3 cut(s) 239, 571, 636
SspMI CTAG 4 cut(s) 78, 131, 1314, 1650
SstI GAGCTC 2 cut(s) 776, 873
StyD4I CCNGG 7 cut(s) 283, 363, 508, 654, 1144, 1161, 1633
StyI CCWWGG 3 cut(s) 642, 979, 1013
TaaI ACNGT 3 cut(s) 305, 552, 1046
TaiI ACGT 1 cut(s) 360
TaqI TCGA 4 cut(s) 1057, 1262, 1271, 1554
TasI AATT 7 cut(s) 746, 1004, 1106, 1434, 1449, 1510, 1653
TatI WGTACW 3 cut(s) 72, 1181, 1382
TauI GCSGC 1 cut(s) 241
TfiI GAWTC 4 cut(s) 458, 852, 1169, 1618
Tru1I TTAA 6 cut(s) 327, 515, 756, 768, 1452, 1484
Tru9I TTAA 6 cut(s) 327, 515, 756, 768, 1452, 1484
TscAI CASTG 3 cut(s) 727, 823, 1134
TseFI GTSAC 1 cut(s) 1527
TseI GCWGC 6 cut(s) 7, 464, 638, 1097, 1100, 1295
Tsp45I GTSAC 1 cut(s) 1527
TspDTI ATGAA 7 cut(s) 408, 420, 485, 607, 644, 1079, 1440
TspGWI ACGGA 2 cut(s) 12, 756
TspRI CASTG 3 cut(s) 727, 823, 1134
Tth111I GACNNNGTC 1 cut(s) 532
VpaK11BI GGWCC 1 cut(s) 1079
XagI CCTNNNNNAGG 1 cut(s) 117
XapI RAATTY 3 cut(s) 1106, 1510, 1653
XbaI TCTAGA 1 cut(s) 130
XcmI CCANNNNNNNNNTGG 1 cut(s) 981
XhoI CTCGAG 1 cut(s) 1056
XmnI GAANNNNTTC 1 cut(s) 933
XspI CTAG 4 cut(s) 78, 131, 1314, 1650
ZrmI AGTACT 1 cut(s) 1183
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.