Rroxscaffold_3G00270210

transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0004415
Physical Location & Seq
Forward (+)
62825112 .. 62830476
5365 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00270210.1

Sequence Viewer

Length: 1734 bp
ATGGAGCTGCCACAGCCCCGTCCGTTTGGAGGCGAAGGAGGAAGAAAACCAACGCATGACTTTCTGTCGTTGTACACTAGTCATTCAACTGCCCAACAAGATCCAATACCACCTTCTCAAGGAGGTTATCTTGAAACTCATGATTTTCTACAACCACTTGAACGAATGGGAAAGACCTGTGCCAAAGAAGAAACCTCGGTTGAGATCATATCACCAAGTAGAAGTAGTGTTGAAAAGCCGCCAAGTGTGGCGCAACGGCCAACTTCTGTGGAGCACATTCTTCCCGGTGGGATTGGGACTTACAGTATAAGCCACATTTCGTATTTTAATCAAAGGGTTCCAAAACCAGAGGAAAACGTATTCCCGGTTGCTCCTCAAGTAAGTAGTACCCATGAAAGGAATGATGAAAACTCAAACTGCAGTTCATATGCCGGAAGTGGTTTCACTTTGTGGGACGAATCTGCAGCAATGAAGGGAAAGACGGGGAAGGAGAATGTGGTGGAAAGACCAGGTTTAACAGGGCAATGGATGTCGTCAGAGAGGCCATCACAGTCATCTTCCACTAACAACCGCAACTGCTTCAGCTCTCAGTCATCTGGGCAGAAGAACCTGAGCTTCATGGAGATGATGAAGTCCGCTGCCAAGGGTTGCACCCAGGAAGAAGAACTTGACGATGAGGAAGAGTTTGCTCTGAAAAAGGAGATGTCCACTACTACTACCACTGCCACTACCCCCTACAACGGAGAATTACGGGTTAAGGTTGATGTTAAGAGCTCTGATCAGAAAGCTAACACGCCACGATCCAAACATTCTGCCACTGAACAGCGAAGGAGGAGTAAAATAAATGACAGGCAAGGATTCTTCCTTCACAAATTCCAAATGTTGAGAGAGCTCATTCCTCATAGTGATCAAAAGAGAGACAAGGCATCATTTTTATTAGAGGTTATCGAATACATTCAGTATTTACAGGAAAAAGTAACCAAGTGTGAGGGTCCATACCAAGGTTGGAACCATGATCCAGCAAAATTGATGCCTTGGGGAAACAACAAGCTTGGGGAAAGTTACTGTGATCAATCTCGAGGTATGAATGGTGGATCTGGTCCTGCATTAGTGTTTGCTGCTGCAAAATTTGAGGAGAAAACTACTTCAGTGTCTCCTACTATTCCTGGAAGTGCTCAGAACCTGGTAGAATCTGATACGAGTACTGAAACTACATTCAGAGCTAAGGATTACCCTAATGGAATAACAAACAAGGCAAATCCCTTTCCTCTGTCAATGCAGTCGAACTTCTCAACACCTGTCAGAAGTGGTAGTGCAGCACCTCATCTTCCACCTAGATTGCCATCTGATGCAGAGAACACATCATCTCATCCTCTCTCCATGTTATTCCCGACAAAATCATGTACTGCTGATGCTGGTGCCATTAGTGATAAGCTAAAAGAACATGAACTTACAATTGAAGGTGGAAGAATTAACATCTCAAGTGCGTACTCTCAAGGGTTATTAAATACTCTTACACAAGCCCTGCAGAATTCTGGTGTGGATTTGTCACAGGCCAGCATCTCGGTGCAAATCGAGCTTGGGAAGCAAGCGTGTAGTAGAACGGCTATACCCAAATCCATTGTCAAGGAAAGTGAGATTCCCTCTATGACTCCTGGGAAAAAGCACCCTAGAATTTCAGTTGGTGAAGACTCGGAACAAGCCCAAAAGAAGATCAGGACAGGCAGACACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HLH

Protein Analysis

577

Amino Acids

63.32

Weight (kDa)

6.96

Isoelectric Point (pI)

55.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HLH PF00010 267 - 323 5.2e-11 Helix-loop-helix DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1418
AciI CCGC 3 cut(s) 239, 571, 636
AclWI GGATC 4 cut(s) 95, 795, 1010, 1102
AcoI YGGCCR 1 cut(s) 257
AcsI RAATTY 4 cut(s) 872, 1127, 1531, 1674
AcuI CTGAAG 2 cut(s) 565, 1131
AdeI CACNNNGTG 1 cut(s) 450
AfaI GTAC 5 cut(s) 74, 388, 1204, 1405, 1490
AfiI CCNNNNNNNGG 5 cut(s) 29, 119, 396, 740, 1001
AgsI TTSAA 5 cut(s) 87, 134, 161, 233, 1460
AhdI GACNNNNNGTC 1 cut(s) 64
AhlI ACTAGT 1 cut(s) 77
AjnI CCWGG 5 cut(s) 508, 654, 1165, 1182, 1654
AjuI GAANNNNNNNTTGG 2 cut(s) 97, 129
Alw21I GWGCWC 4 cut(s) 276, 776, 894, 1177
Alw26I GTCTC 2 cut(s) 912, 1158
AlwI GGATC 4 cut(s) 95, 795, 1010, 1102
AlwNI CAGNNNCTG 1 cut(s) 1183
Ama87I CYCGRG 1 cut(s) 1077
AoxI GGCC 3 cut(s) 257, 542, 1554
ApeKI GCWGC 6 cut(s) 7, 464, 638, 1118, 1121, 1316
ApoI RAATTY 4 cut(s) 872, 1127, 1531, 1674
ArsI GACNNNNNNTTYG 2 cut(s) 1608, 1640
Asp700I GAANNNNTTC 1 cut(s) 954
AspLEI GCGC 1 cut(s) 253
AspS9I GGNCC 2 cut(s) 992, 1100
AsuC2I CCSGG 2 cut(s) 285, 365
AsuHPI GGTGA 2 cut(s) 204, 1697
AvaI CYCGRG 1 cut(s) 1077
AvaII GGWCC 2 cut(s) 992, 1100
BanI GGYRCC 1 cut(s) 1418
BanII GRGCYC 2 cut(s) 776, 894
BbsI GAAGAC 1 cut(s) 1695
Bbv12I GWGCWC 4 cut(s) 276, 776, 894, 1177
BbvI GCAGC 5 cut(s) 476, 625, 1105, 1108, 1328
BccI CCATC 2 cut(s) 553, 1351
BceAI ACGGC 2 cut(s) 272, 1620
BciT130I CCWGG 5 cut(s) 510, 656, 1167, 1184, 1656
BclI TGATCA 3 cut(s) 778, 907, 1069
BcnI CCSGG 2 cut(s) 285, 365
BcoDI GTCTC 2 cut(s) 912, 1158
BcuI ACTAGT 1 cut(s) 77
BfaI CTAG 3 cut(s) 78, 1335, 1671
BfmI CTRYAG 3 cut(s) 418, 462, 1526
BisI GCNGC 7 cut(s) 8, 239, 465, 639, 1119, 1122, 1317
BlsI GCNGC 7 cut(s) 9, 240, 466, 640, 1120, 1123, 1318
BmcAI AGTACT 1 cut(s) 1204
Bme1390I CCNGG 7 cut(s) 285, 365, 510, 656, 1167, 1184, 1656
Bme18I GGWCC 2 cut(s) 992, 1100
BmeRI GACNNNNNGTC 1 cut(s) 64
BmeT110I CYCGRG 1 cut(s) 1077
BmgT120I GGNCC 2 cut(s) 992, 1100
BmiI GGNNCC 4 cut(s) 339, 993, 1010, 1420
BmrFI CCNGG 7 cut(s) 285, 365, 510, 656, 1167, 1184, 1656
BmsI GCATC 5 cut(s) 935, 1020, 1339, 1402, 1569
BpiI GAAGAC 1 cut(s) 1695
BplI GAGNNNNNCTC 2 cut(s) 1628, 1660
Bpu10I CCTNAGC 2 cut(s) 611, 1224
BpuEI CTTGAG 4 cut(s) 102, 360, 1465, 1479
BpuMI CCSGG 2 cut(s) 285, 365
BsaBI GATNNNNATC 1 cut(s) 1342
BsaJI CCNNGG 6 cut(s) 195, 642, 654, 1000, 1034, 1655
Bsc4I CCNNNNNNNGG 5 cut(s) 29, 119, 396, 740, 1001
Bse3DI GCAATG 2 cut(s) 474, 530
Bse8I GATNNNNATC 1 cut(s) 1342
BseBI CCWGG 5 cut(s) 510, 656, 1167, 1184, 1656
BseDI CCNNGG 6 cut(s) 195, 642, 654, 1000, 1034, 1655
BseGI GGATG 2 cut(s) 534, 1369
BseJI GATNNNNATC 1 cut(s) 1342
BseLI CCNNNNNNNGG 5 cut(s) 29, 119, 396, 740, 1001
BseMI GCAATG 2 cut(s) 474, 530
BseMII CTCAG 3 cut(s) 602, 602, 1190
BseRI GAGGAG 3 cut(s) 363, 847, 1148
BseXI GCAGC 5 cut(s) 476, 625, 1105, 1108, 1328
BsgI GTGCAG 1 cut(s) 1335
BshFI GGCC 3 cut(s) 259, 544, 1556
BshNI GGYRCC 1 cut(s) 1418
BsiHKAI GWGCWC 4 cut(s) 276, 776, 894, 1177
BsiHKCI CYCGRG 1 cut(s) 1077
BsiSI CCGG 3 cut(s) 285, 365, 432
BslFI GGGAC 2 cut(s) 310, 467
BslI CCNNNNNNNGG 5 cut(s) 29, 119, 396, 740, 1001
BsmAI GTCTC 2 cut(s) 912, 1158
BsmFI GGGAC 2 cut(s) 310, 467
BsnI GGCC 3 cut(s) 259, 544, 1556
BsoBI CYCGRG 1 cut(s) 1077
Bsp1286I GDGCHC 4 cut(s) 276, 776, 894, 1177
Bsp1407I TGTACA 1 cut(s) 72
Bsp143I GATC 9 cut(s) 100, 204, 778, 800, 907, 1015, 1069, 1094, 1713
BspACI CCGC 3 cut(s) 239, 571, 636
BspANI GGCC 3 cut(s) 259, 544, 1556
BspCNI CTCAG 3 cut(s) 601, 603, 1189
BspHI TCATGA 1 cut(s) 139
BspLI GGNNCC 4 cut(s) 339, 993, 1010, 1420
BspMAI CTGCAG 3 cut(s) 422, 466, 1530
BspPI GGATC 4 cut(s) 95, 795, 1010, 1102
BspT107I GGYRCC 1 cut(s) 1418
BsrDI GCAATG 2 cut(s) 474, 530
BsrGI TGTACA 1 cut(s) 72
BssECI CCNNGG 6 cut(s) 195, 642, 654, 1000, 1034, 1655
BssMI GATC 9 cut(s) 100, 204, 778, 800, 907, 1015, 1069, 1094, 1713
BssT1I CCWWGG 3 cut(s) 642, 1000, 1034
Bst2UI CCWGG 5 cut(s) 510, 656, 1167, 1184, 1656
Bst4CI ACNGT 3 cut(s) 305, 552, 1067
Bst6I CTCTTC 1 cut(s) 675
BstAUI TGTACA 1 cut(s) 72
BstC8I GCNNGC 2 cut(s) 1558, 1590
BstDEI CTNAG 4 cut(s) 588, 611, 1176, 1224
BstENI CCTNNNNNAGG 1 cut(s) 117
BstF5I GGATG 2 cut(s) 534, 1369
BstHHI GCGC 1 cut(s) 253
BstKTI GATC 9 cut(s) 103, 207, 781, 803, 910, 1018, 1072, 1097, 1716
BstMAI GTCTC 2 cut(s) 912, 1158
BstMBI GATC 9 cut(s) 100, 204, 778, 800, 907, 1015, 1069, 1094, 1713
BstMWI GCNNNNNNNGC 3 cut(s) 13, 1576, 1585
BstNI CCWGG 5 cut(s) 510, 656, 1167, 1184, 1656
BstSCI CCNGG 7 cut(s) 283, 363, 508, 654, 1165, 1182, 1654
BstSFI CTRYAG 3 cut(s) 418, 462, 1526
BstV1I GCAGC 5 cut(s) 476, 625, 1105, 1108, 1328
BstV2I GAAGAC 1 cut(s) 1695
BstX2I RGATCY 2 cut(s) 100, 1094
BstYI RGATCY 2 cut(s) 100, 1094
BsuRI GGCC 3 cut(s) 259, 544, 1556
BtsCI GGATG 2 cut(s) 534, 1369
BtsI GCAGTG 1 cut(s) 720
BtsIMutI CAGTG 3 cut(s) 720, 816, 1155
Cac8I GCNNGC 2 cut(s) 1558, 1590
CaiI CAGNNNCTG 1 cut(s) 1183
CciI TCATGA 1 cut(s) 139
CfoI GCGC 1 cut(s) 253
Cfr13I GGNCC 2 cut(s) 992, 1100
CsiI ACCWGGT 2 cut(s) 508, 1182
Csp6I GTAC 5 cut(s) 73, 387, 1203, 1404, 1489
CspCI CAANNNNNGTGG 4 cut(s) 249, 284, 1320, 1355
CviAII CATG 8 cut(s) 56, 140, 392, 619, 1013, 1381, 1401, 1445
CviQI GTAC 5 cut(s) 73, 387, 1203, 1404, 1489
DdeI CTNAG 4 cut(s) 588, 611, 1176, 1224
DpnI GATC 9 cut(s) 102, 206, 780, 802, 909, 1017, 1071, 1096, 1715
DpnII GATC 9 cut(s) 100, 204, 778, 800, 907, 1015, 1069, 1094, 1713
DraIII CACNNNGTG 1 cut(s) 450
DriI GACNNNNNGTC 1 cut(s) 64
EaeI YGGCCR 1 cut(s) 257
Eam1104I CTCTTC 1 cut(s) 675
Eam1105I GACNNNNNGTC 1 cut(s) 64
EarI CTCTTC 1 cut(s) 675
Ecl136II GAGCTC 2 cut(s) 774, 892
Eco130I CCWWGG 3 cut(s) 642, 1000, 1034
Eco24I GRGCYC 2 cut(s) 776, 894
Eco47I GGWCC 2 cut(s) 992, 1100
Eco53kI GAGCTC 2 cut(s) 774, 892
Eco57I CTGAAG 2 cut(s) 565, 1131
Eco88I CYCGRG 1 cut(s) 1077
EcoICRI GAGCTC 2 cut(s) 774, 892
EcoNI CCTNNNNNAGG 1 cut(s) 117
EcoRI GAATTC 1 cut(s) 1531
EcoRII CCWGG 5 cut(s) 508, 654, 1165, 1182, 1654
EcoT14I CCWWGG 3 cut(s) 642, 1000, 1034
EcoT38I GRGCYC 2 cut(s) 776, 894
ErhI CCWWGG 3 cut(s) 642, 1000, 1034
FaeI CATG 8 cut(s) 59, 143, 395, 622, 1016, 1384, 1404, 1448
FalI AAGNNNNNCTT 2 cut(s) 651, 683
FaqI GGGAC 2 cut(s) 310, 467
FatI CATG 8 cut(s) 55, 139, 391, 618, 1012, 1380, 1400, 1444
FauNDI CATATG 1 cut(s) 427
FbaI TGATCA 3 cut(s) 778, 907, 1069
Fnu4HI GCNGC 7 cut(s) 8, 239, 465, 639, 1119, 1122, 1317
FokI GGATG 2 cut(s) 541, 1356
FriOI GRGCYC 2 cut(s) 776, 894
Fsp4HI GCNGC 7 cut(s) 8, 239, 465, 639, 1119, 1122, 1317
FspBI CTAG 3 cut(s) 78, 1335, 1671
GlaI GCGC 1 cut(s) 252
GluI GCNGC 7 cut(s) 8, 239, 465, 639, 1119, 1122, 1317
HaeIII GGCC 3 cut(s) 259, 544, 1556
HapII CCGG 3 cut(s) 285, 365, 432
HhaI GCGC 1 cut(s) 253
Hin1II CATG 8 cut(s) 59, 143, 395, 622, 1016, 1384, 1404, 1448
Hin6I GCGC 1 cut(s) 251
HinP1I GCGC 1 cut(s) 251
HindIII AAGCTT 1 cut(s) 1049
HinfI GANTC 6 cut(s) 458, 858, 1190, 1639, 1651, 1691
HpaII CCGG 3 cut(s) 285, 365, 432
HphI GGTGA 2 cut(s) 204, 1697
Hpy166II GTNNAC 2 cut(s) 75, 708
Hpy188III TCNNGA 5 cut(s) 131, 140, 1077, 1390, 1717
Hpy8I GTNNAC 2 cut(s) 75, 708
HpyAV CCTTC 7 cut(s) 29, 123, 466, 481, 822, 875, 1454
HpyCH4III ACNGT 3 cut(s) 305, 552, 1067
HpyCH4IV ACGT 1 cut(s) 357
HpyF10VI GCNNNNNNNGC 3 cut(s) 13, 1576, 1585
HpyF3I CTNAG 4 cut(s) 588, 611, 1176, 1224
HpySE526I ACGT 1 cut(s) 357
Hsp92II CATG 8 cut(s) 59, 143, 395, 622, 1016, 1384, 1404, 1448
HspAI GCGC 1 cut(s) 251
Ksp22I TGATCA 3 cut(s) 778, 907, 1069
Kzo9I GATC 9 cut(s) 100, 204, 778, 800, 907, 1015, 1069, 1094, 1713
LmnI GCTCC 3 cut(s) 4, 271, 376
Lsp1109I GCAGC 5 cut(s) 476, 625, 1105, 1108, 1328
LweI GCATC 5 cut(s) 935, 1020, 1339, 1402, 1569
MabI ACCWGGT 2 cut(s) 508, 1182
MaeI CTAG 3 cut(s) 78, 1335, 1671
MaeII ACGT 1 cut(s) 357
MaeIII GTNAC 3 cut(s) 976, 1061, 1548
MalI GATC 9 cut(s) 102, 206, 780, 802, 909, 1017, 1071, 1096, 1715
MboI GATC 9 cut(s) 100, 204, 778, 800, 907, 1015, 1069, 1094, 1713
MfeI CAATTG 1 cut(s) 1455
MflI RGATCY 2 cut(s) 100, 1094
MhlI GDGCHC 4 cut(s) 276, 776, 894, 1177
MluCI AATT 8 cut(s) 746, 872, 1025, 1127, 1455, 1470, 1531, 1674
MlyI GAGTC 2 cut(s) 1645, 1685
MmeI TCCRAC 1 cut(s) 986
MroXI GAANNNNTTC 1 cut(s) 954
MseI TTAA 6 cut(s) 327, 515, 756, 768, 1473, 1505
MslI CAYNNNNRTG 2 cut(s) 623, 1565
MspA1I CMGCKG 1 cut(s) 638
MspI CCGG 3 cut(s) 285, 365, 432
MspR9I CCNGG 7 cut(s) 285, 365, 510, 656, 1167, 1184, 1656
MunI CAATTG 1 cut(s) 1455
MvaI CCWGG 5 cut(s) 510, 656, 1167, 1184, 1656
MwoI GCNNNNNNNGC 3 cut(s) 13, 1576, 1585
NciI CCSGG 2 cut(s) 285, 365
NdeI CATATG 1 cut(s) 427
NdeII GATC 9 cut(s) 100, 204, 778, 800, 907, 1015, 1069, 1094, 1713
NlaIII CATG 8 cut(s) 59, 143, 395, 622, 1016, 1384, 1404, 1448
NlaIV GGNNCC 4 cut(s) 339, 993, 1010, 1420
NmuCI GTSAC 1 cut(s) 1548
PaeR7I CTCGAG 1 cut(s) 1077
PagI TCATGA 1 cut(s) 139
PdmI GAANNNNTTC 1 cut(s) 954
PfeI GAWTC 4 cut(s) 458, 858, 1190, 1639
PfoI TCCNGGA 1 cut(s) 1165
PkrI GCNGC 7 cut(s) 9, 240, 466, 640, 1120, 1123, 1318
PleI GAGTC 2 cut(s) 1645, 1685
PpsI GAGTC 2 cut(s) 1645, 1685
Psp124BI GAGCTC 2 cut(s) 776, 894
Psp6I CCWGG 5 cut(s) 508, 654, 1165, 1182, 1654
PspGI CCWGG 5 cut(s) 508, 654, 1165, 1182, 1654
PspN4I GGNNCC 4 cut(s) 339, 993, 1010, 1420
PspPI GGNCC 2 cut(s) 992, 1100
PstI CTGCAG 3 cut(s) 422, 466, 1530
PstNI CAGNNNCTG 1 cut(s) 1183
PsuI RGATCY 2 cut(s) 100, 1094
RsaI GTAC 5 cut(s) 74, 388, 1204, 1405, 1490
RsaNI GTAC 5 cut(s) 73, 387, 1203, 1404, 1489
RseI CAYNNNNRTG 2 cut(s) 623, 1565
SacI GAGCTC 2 cut(s) 776, 894
SaqAI TTAA 6 cut(s) 327, 515, 756, 768, 1473, 1505
SatI GCNGC 7 cut(s) 8, 239, 465, 639, 1119, 1122, 1317
Sau3AI GATC 9 cut(s) 100, 204, 778, 800, 907, 1015, 1069, 1094, 1713
Sau96I GGNCC 2 cut(s) 992, 1100
ScaI AGTACT 1 cut(s) 1204
SchI GAGTC 2 cut(s) 1645, 1685
ScrFI CCNGG 7 cut(s) 285, 365, 510, 656, 1167, 1184, 1656
SduI GDGCHC 4 cut(s) 276, 776, 894, 1177
SexAI ACCWGGT 2 cut(s) 508, 1182
SfaNI GCATC 5 cut(s) 935, 1020, 1339, 1402, 1569
SfcI CTRYAG 3 cut(s) 418, 462, 1526
Sfr274I CTCGAG 1 cut(s) 1077
SinI GGWCC 2 cut(s) 992, 1100
SlaI CTCGAG 1 cut(s) 1077
SmiMI CAYNNNNRTG 2 cut(s) 623, 1565
SmlI CTYRAG 5 cut(s) 117, 375, 1077, 1480, 1494
SmoI CTYRAG 5 cut(s) 117, 375, 1077, 1480, 1494
SpeI ACTAGT 1 cut(s) 77
Sse9I AATT 8 cut(s) 746, 872, 1025, 1127, 1455, 1470, 1531, 1674
SsiI CCGC 3 cut(s) 239, 571, 636
SspMI CTAG 3 cut(s) 78, 1335, 1671
SstI GAGCTC 2 cut(s) 776, 894
StyD4I CCNGG 7 cut(s) 283, 363, 508, 654, 1165, 1182, 1654
StyI CCWWGG 3 cut(s) 642, 1000, 1034
TaaI ACNGT 3 cut(s) 305, 552, 1067
TaiI ACGT 1 cut(s) 360
TaqI TCGA 4 cut(s) 948, 1078, 1283, 1575
TasI AATT 8 cut(s) 746, 872, 1025, 1127, 1455, 1470, 1531, 1674
TatI WGTACW 3 cut(s) 72, 1202, 1403
TauI GCSGC 1 cut(s) 241
TfiI GAWTC 4 cut(s) 458, 858, 1190, 1639
Tru1I TTAA 6 cut(s) 327, 515, 756, 768, 1473, 1505
Tru9I TTAA 6 cut(s) 327, 515, 756, 768, 1473, 1505
TscAI CASTG 3 cut(s) 727, 823, 1155
TseFI GTSAC 1 cut(s) 1548
TseI GCWGC 6 cut(s) 7, 464, 638, 1118, 1121, 1316
Tsp45I GTSAC 1 cut(s) 1548
TspDTI ATGAA 8 cut(s) 408, 414, 420, 485, 607, 644, 1100, 1461
TspGWI ACGGA 2 cut(s) 12, 756
TspRI CASTG 3 cut(s) 727, 823, 1155
VpaK11BI GGWCC 2 cut(s) 992, 1100
XagI CCTNNNNNAGG 1 cut(s) 117
XapI RAATTY 4 cut(s) 872, 1127, 1531, 1674
XcmI CCANNNNNNNNNTGG 1 cut(s) 1002
XhoI CTCGAG 1 cut(s) 1077
XmnI GAANNNNTTC 1 cut(s) 954
XspI CTAG 3 cut(s) 78, 1335, 1671
ZrmI AGTACT 1 cut(s) 1204
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.