MD15G1134900.v1.1

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0011127
Physical Location & Seq
Forward (+)
9825189 .. 9829284
4096 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1134900.v1.1.491

Sequence Viewer

Length: 1935 bp
ATGAATGAAGGCAAACCCACTTCAGCTTCAGTGAATGGTCCGTCGGTGACGGTCATGTCGTCGGAATCCTGTGGCTCCAGCTTGCTTCTGGGTCTGTCAGATGACGTGTTTTCCATTGTCATCGGCTCCCTTTCACCTCGGGACATTTGTAATCTCGGTCTCTGCTGCCGGAGTTTTTATGCACTCGTTGACTCCGATAAGGTCTGGCTCACCCAATGCCAGATGCTTGGAATTGTACCTCTCCAAGACCTTCTTGTCTGGCGTCAGGCCGTCTCATCTTACAAGGCGCTTTGCCGCTTTCTCTCTAGTGTTCAGCCTCTCATGGGAATTTGGGTTCACCAGAATCCAGAGCTTGGCAATGTAGTCTATGTCATGCCAGGTTTTGTTTCCGTTGTTGGCTGCCGCATTATACCTCAAGAACTTGGCCCGTTAGGCATTGAGGATGGCCCTCTTCTCTGGGCTCCTGTATTTGAAATTATTGGTGATTCTGATGGTTCCTCGTCCTTTTTTCTACATGGAAGGGACAACGGACAGGACTATGTCTATCCTGGTTTTGTGAAACCTGTTAGCAGGTCATGCAATGTTCTGTTGCTTGAGATCGAGCCTAGACCCCATAAAAATGGGGTTGAATTGTTGCACAGCAAGAGTTTTGTTAATGACTCAGATAAGGAGCTGTCAAGGAAGATTTGTAGGTCGAATAGTGATCTTTCAAGGTCACAGAGGGTGTTTCGGCAGAGTGAGACTTCGGTGCCCTTCAGTCGTTTGGCTTTCAGTGACAGAAGAAAATTGCTTGAGGTTGTCATGAACCAAATCCGTGTAAAGGTTCCCGATGCAGCAATTGGGCCACTCTTTCCAAGGTTGAGGGTTAGTGGGGAGAACACTCAGATTGGTACGGCGCTCTTATTGGAACGAAGATCATTGCTTTTTCAAATGCATAAACTTGGTGGATATCAGGTGGATTCGAAGGAAAGTAATCTGCTTCCACCGAATCCCACTCAACTGCGGTTAAGTGAGATCAGAAAGAGTCTTGATCGGTCAAGTGGTTCGCAAAGTTCTATTAATGAGGATGATGGCCACAGACACTGCAACAGGAGGAGAAGTCTTGGCAGGTACTTTAGGGATAGCTTCAATCAGATGCTGGGAAAGTCAATCTCTTTCAATGGTAATTCAAAGAATAGTTCTTCCAGCAGTGAGAGTAAGTATGCATCCCTTCAGGATTTTCTGAAATCAAGTGATACAATAGGACTGACTTTACATGCTTCCACTGTGAAGTTATCTTCTTATCGAGCATGGCCAAACATGCATGAAAGTCGATTTGCCATATACAAATTGCCTTTGCGGATCCCAACTGCTGAGCAAGAGTATGCTGGTTTATGGGGAGGCACTTTTGGGTGGCCTCCCGGGAGGCCGACCAAAGACAAGCCTGGAAAGGCTCTCTTCTTCCTTTTGCTTTCTTATGAAGAGTGCGAGGGGCAACAGCTTCTAATTGCAACCAAAATATTAGAGGGTACCCACTATGTTCTACACCCTAATGGCTCAGCCATGTTTATAGTAAATATCGATGAACCTTCATTGGATCCATTCCCTTGGGATACTGATGCTGATTCCCATCCTGTGAATGTTAATCATGCTTTTAAAGGTGAGGGTATTGCCAATGGGTATGGTTTTAGATACCCTGGCTCGAAACCTGGTTCCCTCTTTGTGTTTGAAGATGGTCAACTTGCCTTCATTTGGAAGGAGTCCAGGGCTATCTTGACTTTGCAGAGGCTGGACTTGCAAGAGCTTTTGAAAAAAGGTGAAAGGGTGCCTGCGCTACCTCCAATTGCTAACTTTTCATACTTAACCAAGTCTTACTCAAATGTGTTTGCTGAGTTCCCAAGCATCTCAACTTCGTGGGCGTCAACAAGGCAGGAGCAGTCTGACACCCCTAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box

Protein Analysis

645

Amino Acids

71.68

Weight (kDa)

8.36

Isoelectric Point (pI)

50.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 29 - 70 3e-07 F-box domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011127)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G39450
fragaria_vesca FvH4_1g24840 FvH4_1g24840 FvH4_1g24840
malus_domestica MD15G1134900.v1.1
prunus_persica Prupe.4G275200_v2.0.a1 Prupe.4G275200_v2.0.a1
pyrus_communis pycom15g12170
rosa_chinensis RchiOBHm_Chr2g0122451
rosa_laevigata RLG00000018678
rosa_multiflora Rmu_co8054258.1_g000001 Rmu_sc0003832.1_g000018
rosa_roxburghii Rroxscaffold_2G00121630
rosa_rugosa Rorug02G0238000 Rorug02G0238100
rosa_samantha Rh2AG297400 Rh2BG306200 Rh2CG284500 Rh2DG321000
rosa_wichuraiana Rw2G023660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 55, 254
Acc36I ACCTGC 2 cut(s) 561, 1098
Acc65I GGTACC 1 cut(s) 1508
AccB1I GGYRCC 3 cut(s) 748, 1508, 1804
AccB7I CCANNNNNTGG 1 cut(s) 353
AciI CCGC 4 cut(s) 295, 403, 1003, 1339
AclWI GGATC 4 cut(s) 1336, 1349, 1571, 1584
AcoI YGGCCR 2 cut(s) 1072, 1292
AcsI RAATTY 1 cut(s) 327
AcuI CTGAAG 4 cut(s) 6, 12, 739, 1196
AcyI GRCGYC 2 cut(s) 262, 1898
AfaI GTAC 4 cut(s) 237, 892, 1112, 1510
AfiI CCNNNNNNNGG 4 cut(s) 323, 353, 820, 1731
AflIII ACRYGT 1 cut(s) 105
AgsI TTSAA 9 cut(s) 473, 629, 711, 929, 1129, 1159, 1170, 1709, 1789
AjiI CACGTC 1 cut(s) 106
AjnI CCWGG 6 cut(s) 376, 547, 1423, 1675, 1687, 1742
AloI GAACNNNNNNTCC 2 cut(s) 318, 350
AluBI AGCT 7 cut(s) 26, 81, 352, 673, 1125, 1480, 1783
AluI AGCT 7 cut(s) 26, 81, 352, 673, 1125, 1480, 1783
Alw26I GTCTC 3 cut(s) 164, 277, 734
AlwI GGATC 4 cut(s) 1336, 1349, 1571, 1584
AlwNI CAGNNNCTG 3 cut(s) 1083, 1138, 1768
Ama87I CYCGRG 2 cut(s) 138, 1400
AoxI GGCC 8 cut(s) 267, 424, 445, 842, 1072, 1292, 1394, 1406
ApeKI GCWGC 3 cut(s) 165, 399, 833
ApoI RAATTY 1 cut(s) 327
AseI ATTAAT 1 cut(s) 1059
Asp718I GGTACC 1 cut(s) 1508
AspA2I CCTAGG 1 cut(s) 1928
AspLEI GCGC 3 cut(s) 289, 898, 1813
AspS9I GGNCC 4 cut(s) 38, 425, 446, 842
AsuC2I CCSGG 2 cut(s) 1401, 1402
AsuHPI GGTGA 7 cut(s) 58, 126, 202, 329, 494, 1652, 1808
AsuII TTCGAA 1 cut(s) 962
AvaI CYCGRG 2 cut(s) 138, 1400
AvaII GGWCC 1 cut(s) 38
AvrII CCTAGG 1 cut(s) 1928
BaeGI GKGCMC 1 cut(s) 753
BalI TGGCCA 2 cut(s) 1074, 1294
BamHI GGATCC 2 cut(s) 1341, 1576
BanI GGYRCC 3 cut(s) 748, 1508, 1804
BanII GRGCYC 1 cut(s) 463
BbvI GCAGC 3 cut(s) 152, 386, 845
BccI CCATC 5 cut(s) 437, 485, 1064, 1617, 1706
BceAI ACGGC 2 cut(s) 254, 909
BcgI CGANNNNNNTGC 2 cut(s) 1292, 1326
BciT130I CCWGG 6 cut(s) 378, 549, 1425, 1677, 1689, 1744
BciVI GTATCC 1 cut(s) 1585
BcnI CCSGG 2 cut(s) 1401, 1402
BcoDI GTCTC 3 cut(s) 164, 277, 734
BfaI CTAG 3 cut(s) 306, 606, 1929
BfoI RGCGCY 2 cut(s) 290, 899
BfuAI ACCTGC 2 cut(s) 561, 1098
BfuI GTATCC 1 cut(s) 1585
BglI GCCNNNNNGGC 1 cut(s) 432
BisI GCNGC 5 cut(s) 166, 295, 400, 403, 834
BlnI CCTAGG 1 cut(s) 1928
BlpI GCTNAGC 2 cut(s) 1353, 1537
BlsI GCNGC 5 cut(s) 167, 296, 401, 404, 835
Bme1390I CCNGG 8 cut(s) 378, 549, 1401, 1402, 1425, 1677, 1689, 1744
Bme18I GGWCC 1 cut(s) 38
BmeT110I CYCGRG 2 cut(s) 138, 1400
BmgBI CACGTC 1 cut(s) 106
BmgT120I GGNCC 4 cut(s) 38, 425, 446, 842
BmrFI CCNGG 8 cut(s) 378, 549, 1401, 1402, 1425, 1677, 1689, 1744
BmsI GCATC 6 cut(s) 213, 820, 1125, 1214, 1588, 1890
BpmI CTGGAG 1 cut(s) 61
Bpu1102I GCTNAGC 2 cut(s) 1353, 1537
Bpu14I TTCGAA 1 cut(s) 962
BpuEI CTTGAG 3 cut(s) 399, 614, 812
BpuMI CCSGG 2 cut(s) 1401, 1402
Bsa29I ATCGAT 1 cut(s) 1560
BsaBI GATNNNNATC 1 cut(s) 1608
BsaHI GRCGYC 2 cut(s) 262, 1898
BsaI GGTCTC 1 cut(s) 164
BsaJI CCNNGG 7 cut(s) 137, 854, 1400, 1586, 1675, 1743, 1928
BsaXI ACNNNNNCTCC 2 cut(s) 1084, 1114
Bsc4I CCNNNNNNNGG 4 cut(s) 323, 353, 820, 1731
Bse3DI GCAATG 3 cut(s) 364, 586, 917
Bse8I GATNNNNATC 1 cut(s) 1608
BseBI CCWGG 6 cut(s) 378, 549, 1425, 1677, 1689, 1744
BseCI ATCGAT 1 cut(s) 1560
BseDI CCNNGG 7 cut(s) 137, 854, 1400, 1586, 1675, 1743, 1928
BseGI GGATG 4 cut(s) 448, 1072, 1205, 1609
BseJI GATNNNNATC 1 cut(s) 1608
BseLI CCNNNNNNNGG 4 cut(s) 323, 353, 820, 1731
BseMI GCAATG 3 cut(s) 364, 586, 917
BseMII CTCAG 5 cut(s) 675, 896, 1344, 1551, 1860
BseRI GAGGAG 1 cut(s) 1108
BseSI GKGCMC 1 cut(s) 753
BseXI GCAGC 3 cut(s) 152, 386, 845
BseYI CCCAGC 1 cut(s) 1138
BshFI GGCC 8 cut(s) 269, 426, 447, 844, 1074, 1294, 1396, 1408
BshNI GGYRCC 3 cut(s) 748, 1508, 1804
BshVI ATCGAT 1 cut(s) 1560
BsiHKCI CYCGRG 2 cut(s) 138, 1400
BsiSI CCGG 2 cut(s) 169, 1401
BslFI GGGAC 2 cut(s) 155, 536
BslI CCNNNNNNNGG 4 cut(s) 323, 353, 820, 1731
BsmAI GTCTC 3 cut(s) 164, 277, 734
BsmBI CGTCTC 1 cut(s) 277
BsmFI GGGAC 2 cut(s) 155, 536
BsnI GGCC 8 cut(s) 269, 426, 447, 844, 1074, 1294, 1396, 1408
Bso31I GGTCTC 1 cut(s) 164
BsoBI CYCGRG 2 cut(s) 138, 1400
Bsp119I TTCGAA 1 cut(s) 962
Bsp1286I GDGCHC 2 cut(s) 463, 753
Bsp143I GATC 7 cut(s) 597, 703, 914, 1014, 1030, 1341, 1576
Bsp1720I GCTNAGC 2 cut(s) 1353, 1537
BspACI CCGC 4 cut(s) 295, 403, 1003, 1339
BspANI GGCC 8 cut(s) 269, 426, 447, 844, 1074, 1294, 1396, 1408
BspCNI CTCAG 5 cut(s) 674, 895, 1345, 1550, 1861
BspDI ATCGAT 1 cut(s) 1560
BspHI TCATGA 1 cut(s) 801
BspMI ACCTGC 2 cut(s) 561, 1098
BspPI GGATC 4 cut(s) 1336, 1349, 1571, 1584
BspT104I TTCGAA 1 cut(s) 962
BspT107I GGYRCC 3 cut(s) 748, 1508, 1804
BspTNI GGTCTC 1 cut(s) 164
BsrDI GCAATG 3 cut(s) 364, 586, 917
BssECI CCNNGG 7 cut(s) 137, 854, 1400, 1586, 1675, 1743, 1928
BssMI GATC 7 cut(s) 597, 703, 914, 1014, 1030, 1341, 1576
BssNI GRCGYC 2 cut(s) 262, 1898
BssT1I CCWWGG 3 cut(s) 854, 1586, 1928
Bst2UI CCWGG 6 cut(s) 378, 549, 1425, 1677, 1689, 1744
Bst4CI ACNGT 2 cut(s) 52, 1267
Bst6I CTCTTC 3 cut(s) 456, 1442, 1455
BstACI GRCGYC 2 cut(s) 262, 1898
BstAPI GCANNNNNTGC 1 cut(s) 576
BstBI TTCGAA 1 cut(s) 962
BstC8I GCNNGC 2 cut(s) 83, 1809
BstDEI CTNAG 5 cut(s) 661, 882, 1353, 1537, 1869
BstF5I GGATG 4 cut(s) 448, 1072, 1205, 1609
BstH2I RGCGCY 2 cut(s) 290, 899
BstHHI GCGC 3 cut(s) 289, 898, 1813
BstKTI GATC 7 cut(s) 600, 706, 917, 1017, 1033, 1344, 1579
BstMAI GTCTC 3 cut(s) 164, 277, 734
BstMBI GATC 7 cut(s) 597, 703, 914, 1014, 1030, 1341, 1576
BstMWI GCNNNNNNNGC 4 cut(s) 432, 576, 1300, 1774
BstNI CCWGG 6 cut(s) 378, 549, 1425, 1677, 1689, 1744
BstNSI RCATGY 2 cut(s) 1259, 1303
BstSCI CCNGG 8 cut(s) 376, 547, 1399, 1400, 1423, 1675, 1687, 1742
BstSLI GKGCMC 1 cut(s) 753
BstV1I GCAGC 3 cut(s) 152, 386, 845
BstX2I RGATCY 2 cut(s) 1341, 1576
BstXI CCANNNNNNTGG 3 cut(s) 227, 620, 1587
BstYI RGATCY 2 cut(s) 1341, 1576
Bsu15I ATCGAT 1 cut(s) 1560
BsuI GTATCC 1 cut(s) 1585
BsuRI GGCC 8 cut(s) 269, 426, 447, 844, 1074, 1294, 1396, 1408
BsuTUI ATCGAT 1 cut(s) 1560
BtrI CACGTC 1 cut(s) 106
BtsCI GGATG 4 cut(s) 448, 1072, 1205, 1609
BtsI GCAGTG 2 cut(s) 1081, 1195
BtsIMutI CAGTG 5 cut(s) 36, 778, 1081, 1195, 1263
BveI ACCTGC 2 cut(s) 561, 1098
Cac8I GCNNGC 2 cut(s) 83, 1809
CaiI CAGNNNCTG 3 cut(s) 1083, 1138, 1768
CciI TCATGA 1 cut(s) 801
CfoI GCGC 3 cut(s) 289, 898, 1813
Cfr13I GGNCC 4 cut(s) 38, 425, 446, 842
Cfr9I CCCGGG 1 cut(s) 1400
ClaI ATCGAT 1 cut(s) 1560
CseI GACGC 2 cut(s) 251, 1887
CsiI ACCWGGT 1 cut(s) 1687
Csp6I GTAC 4 cut(s) 236, 891, 1111, 1509
CviQI GTAC 4 cut(s) 236, 891, 1111, 1509
DdeI CTNAG 5 cut(s) 661, 882, 1353, 1537, 1869
DpnI GATC 7 cut(s) 599, 705, 916, 1016, 1032, 1343, 1578
DpnII GATC 7 cut(s) 597, 703, 914, 1014, 1030, 1341, 1576
DraI TTTAAA 1 cut(s) 1636
DrdI GACNNNNNNGTC 2 cut(s) 55, 254
DseDI GACNNNNNNGTC 2 cut(s) 55, 254
EaeI YGGCCR 2 cut(s) 1072, 1292
Eam1104I CTCTTC 3 cut(s) 456, 1442, 1455
EarI CTCTTC 3 cut(s) 456, 1442, 1455
Eco130I CCWWGG 3 cut(s) 854, 1586, 1928
Eco24I GRGCYC 1 cut(s) 463
Eco31I GGTCTC 1 cut(s) 164
Eco32I GATATC 1 cut(s) 950
Eco47I GGWCC 1 cut(s) 38
Eco57I CTGAAG 4 cut(s) 6, 12, 739, 1196
Eco88I CYCGRG 2 cut(s) 138, 1400
EcoRII CCWGG 6 cut(s) 376, 547, 1423, 1675, 1687, 1742
EcoRV GATATC 1 cut(s) 950
EcoT14I CCWWGG 3 cut(s) 854, 1586, 1928
EcoT22I ATGCAT 3 cut(s) 936, 1207, 1305
EcoT38I GRGCYC 1 cut(s) 463
ErhI CCWWGG 3 cut(s) 854, 1586, 1928
Esp3I CGTCTC 1 cut(s) 277
FalI AAGNNNNNCTT 4 cut(s) 237, 269, 1421, 1453
FaqI GGGAC 2 cut(s) 155, 536
Fnu4HI GCNGC 5 cut(s) 166, 295, 400, 403, 834
FokI GGATG 4 cut(s) 455, 1079, 1192, 1596
FriOI GRGCYC 1 cut(s) 463
Fsp4HI GCNGC 5 cut(s) 166, 295, 400, 403, 834
FspBI CTAG 3 cut(s) 306, 606, 1929
GlaI GCGC 3 cut(s) 288, 897, 1812
GluI GCNGC 5 cut(s) 166, 295, 400, 403, 834
GsaI CCCAGC 1 cut(s) 1142
GsuI CTGGAG 1 cut(s) 61
HaeII RGCGCY 2 cut(s) 290, 899
HaeIII GGCC 8 cut(s) 269, 426, 447, 844, 1074, 1294, 1396, 1408
HapII CCGG 2 cut(s) 169, 1401
HgaI GACGC 2 cut(s) 251, 1887
HhaI GCGC 3 cut(s) 289, 898, 1813
Hin1I GRCGYC 2 cut(s) 262, 1898
Hin6I GCGC 3 cut(s) 287, 896, 1811
HinP1I GCGC 3 cut(s) 287, 896, 1811
HincII GTYRAC 3 cut(s) 190, 1718, 1902
HindII GTYRAC 3 cut(s) 190, 1718, 1902
HpaII CCGG 2 cut(s) 169, 1401
HphI GGTGA 7 cut(s) 58, 126, 202, 329, 494, 1652, 1808
Hpy166II GTNNAC 4 cut(s) 190, 337, 1718, 1902
Hpy188III TCNNGA 8 cut(s) 140, 347, 416, 802, 827, 1028, 1214, 1753
Hpy8I GTNNAC 4 cut(s) 190, 337, 1718, 1902
Hpy99I CGWCG 2 cut(s) 46, 64
HpyAV CCTTC 8 cut(s) 260, 513, 763, 958, 1220, 1578, 1729, 1735
HpyCH4III ACNGT 2 cut(s) 52, 1267
HpyCH4IV ACGT 1 cut(s) 105
HpyF10VI GCNNNNNNNGC 4 cut(s) 432, 576, 1300, 1774
HpyF3I CTNAG 5 cut(s) 661, 882, 1353, 1537, 1869
HpySE526I ACGT 1 cut(s) 105
Hsp92I GRCGYC 2 cut(s) 262, 1898
HspAI GCGC 3 cut(s) 287, 896, 1811
KpnI GGTACC 1 cut(s) 1512
Kzo9I GATC 7 cut(s) 597, 703, 914, 1014, 1030, 1341, 1576
LmnI GCTCC 5 cut(s) 80, 131, 466, 670, 1912
Lsp1109I GCAGC 3 cut(s) 152, 386, 845
LweI GCATC 6 cut(s) 213, 820, 1125, 1214, 1588, 1890
MabI ACCWGGT 1 cut(s) 1687
MaeI CTAG 3 cut(s) 306, 606, 1929
MaeII ACGT 1 cut(s) 105
MaeIII GTNAC 3 cut(s) 46, 714, 773
MalI GATC 7 cut(s) 599, 705, 916, 1016, 1032, 1343, 1578
MboI GATC 7 cut(s) 597, 703, 914, 1014, 1030, 1341, 1576
MfeI CAATTG 2 cut(s) 837, 1821
MflI RGATCY 2 cut(s) 1341, 1576
MhlI GDGCHC 2 cut(s) 463, 753
MlsI TGGCCA 2 cut(s) 1074, 1294
MluNI TGGCCA 2 cut(s) 1074, 1294
MlyI GAGTC 4 cut(s) 185, 653, 1033, 1748
MmeI TCCRAC 1 cut(s) 42
Mox20I TGGCCA 2 cut(s) 1074, 1294
Mph1103I ATGCAT 3 cut(s) 936, 1207, 1305
MscI TGGCCA 2 cut(s) 1074, 1294
MseI TTAA 6 cut(s) 654, 1007, 1059, 1623, 1635, 1841
MslI CAYNNNNRTG 2 cut(s) 618, 1530
Msp20I TGGCCA 2 cut(s) 1074, 1294
MspI CCGG 2 cut(s) 169, 1401
MspR9I CCNGG 8 cut(s) 378, 549, 1401, 1402, 1425, 1677, 1689, 1744
MunI CAATTG 2 cut(s) 837, 1821
MvaI CCWGG 6 cut(s) 378, 549, 1425, 1677, 1689, 1744
MwoI GCNNNNNNNGC 4 cut(s) 432, 576, 1300, 1774
NciI CCSGG 2 cut(s) 1401, 1402
NdeII GATC 7 cut(s) 597, 703, 914, 1014, 1030, 1341, 1576
NmuCI GTSAC 3 cut(s) 46, 714, 773
NsiI ATGCAT 3 cut(s) 936, 1207, 1305
NspI RCATGY 2 cut(s) 1259, 1303
NspV TTCGAA 1 cut(s) 962
PagI TCATGA 1 cut(s) 801
PcsI WCGNNNNNNNCGW 2 cut(s) 56, 192
PfeI GAWTC 6 cut(s) 65, 343, 485, 959, 988, 1604
PflFI GACNNNGTC 1 cut(s) 539
PflMI CCANNNNNTGG 1 cut(s) 353
PkrI GCNGC 5 cut(s) 167, 296, 401, 404, 835
PleI GAGTC 4 cut(s) 185, 653, 1032, 1747
PpsI GAGTC 4 cut(s) 185, 653, 1032, 1747
PshBI ATTAAT 1 cut(s) 1059
Psp6I CCWGG 6 cut(s) 376, 547, 1423, 1675, 1687, 1742
PspFI CCCAGC 1 cut(s) 1138
PspGI CCWGG 6 cut(s) 376, 547, 1423, 1675, 1687, 1742
PspPI GGNCC 4 cut(s) 38, 425, 446, 842
PstNI CAGNNNCTG 3 cut(s) 1083, 1138, 1768
PsuI RGATCY 2 cut(s) 1341, 1576
PsyI GACNNNGTC 1 cut(s) 539
RsaI GTAC 4 cut(s) 237, 892, 1112, 1510
RsaNI GTAC 4 cut(s) 236, 891, 1111, 1509
RseI CAYNNNNRTG 2 cut(s) 618, 1530
SaqAI TTAA 6 cut(s) 654, 1007, 1059, 1623, 1635, 1841
SatI GCNGC 5 cut(s) 166, 295, 400, 403, 834
Sau3AI GATC 7 cut(s) 597, 703, 914, 1014, 1030, 1341, 1576
Sau96I GGNCC 4 cut(s) 38, 425, 446, 842
SchI GAGTC 4 cut(s) 185, 653, 1033, 1748
ScrFI CCNGG 8 cut(s) 378, 549, 1401, 1402, 1425, 1677, 1689, 1744
SduI GDGCHC 2 cut(s) 463, 753
SexAI ACCWGGT 1 cut(s) 1687
SfaNI GCATC 6 cut(s) 213, 820, 1125, 1214, 1588, 1890
SfuI TTCGAA 1 cut(s) 962
SinI GGWCC 1 cut(s) 38
SmaI CCCGGG 1 cut(s) 1402
SmiMI CAYNNNNRTG 2 cut(s) 618, 1530
SmlI CTYRAG 3 cut(s) 414, 593, 791
SmoI CTYRAG 3 cut(s) 414, 593, 791
SsiI CCGC 4 cut(s) 295, 403, 1003, 1339
SspI AATATT 1 cut(s) 1500
SspMI CTAG 3 cut(s) 306, 606, 1929
StyD4I CCNGG 8 cut(s) 376, 547, 1399, 1400, 1423, 1675, 1687, 1742
StyI CCWWGG 3 cut(s) 854, 1586, 1928
TaaI ACNGT 2 cut(s) 52, 1267
TaiI ACGT 1 cut(s) 108
TaqI TCGA 7 cut(s) 600, 695, 962, 1285, 1312, 1560, 1682
TaqII GACCGA 2 cut(s) 146, 1023
TauI GCSGC 2 cut(s) 297, 405
TfiI GAWTC 6 cut(s) 65, 343, 485, 959, 988, 1604
Tru1I TTAA 6 cut(s) 654, 1007, 1059, 1623, 1635, 1841
Tru9I TTAA 6 cut(s) 654, 1007, 1059, 1623, 1635, 1841
TscAI CASTG 5 cut(s) 36, 778, 1088, 1195, 1270
TseFI GTSAC 3 cut(s) 46, 714, 773
TseI GCWGC 3 cut(s) 165, 399, 833
Tsp45I GTSAC 3 cut(s) 46, 714, 773
TspDTI ATGAA 9 cut(s) 17, 21, 818, 1320, 1473, 1560, 1578, 1717, 1824
TspGWI ACGGA 4 cut(s) 30, 379, 543, 803
TspMI CCCGGG 1 cut(s) 1400
TspRI CASTG 5 cut(s) 36, 778, 1088, 1195, 1270
Tth111I GACNNNGTC 1 cut(s) 539
Van91I CCANNNNNTGG 1 cut(s) 353
VpaK11BI GGWCC 1 cut(s) 38
VspI ATTAAT 1 cut(s) 1059
XapI RAATTY 1 cut(s) 327
XceI RCATGY 2 cut(s) 1259, 1303
XcmI CCANNNNNNNNNTGG 1 cut(s) 85
XmaI CCCGGG 1 cut(s) 1400
XmaJI CCTAGG 1 cut(s) 1928
XspI CTAG 3 cut(s) 306, 606, 1929
Zsp2I ATGCAT 3 cut(s) 936, 1207, 1305
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.