Rorug02G0238100

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0011127
Physical Location & Seq
Reverse (-)
23888932 .. 23924997
36066 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0238100.1

Sequence Viewer

Length: 2556 bp
ATGGCAGCACAAACCAACCTTAACATCACCACAGACCGGTCTGCTCTTCTTGCTCTCAAAGCCAGTATCACCAATGACCCTCAAAACATAGTCTTCACCAACTGGTCAACCACTACTCTTGTTTGCAACTGGGTTGGAGTCACTTGTGGTGCAATCCATCATCGAATTGCAGAGTTGAACATCTCTTACTTTGATCTCACAGGCACCATTCCTCTGGAGCTGGGCAACTTATCTTTTCTTGTTGATCTGGACTTTAGAAATAATAGTTTTCATGGTACCTTGCCTCAAGAATTGGCTCGCCTGCGCTGGTTGAAGTTTATTAACTTGGAATACAACAAGTTTATGGGAGTGATTCCATCATGGTTTGGGTCCTTGTCGAAACTTCAAATATTCAGATTTTATGGTAATCAATTTTCCGGTTCCATCCCAGCTACAATATTCAACTTATCTGCTCTGCAAATAATTGATCTGGGTTATAACCGACTCTCAGGTCCTATACCATATGAGATTGGTTATCTTCCAAATTTAGAGAGATTGGGGCTCGGTCAAAATAATCTAAATGGCCATATCCCATCCTCAATCTTCAATATCTCCACAATAAAAGTATTAAATCTTGGCCTCAATCAGCTTTCAGGCAGCCTCCCAGCAGACATAGGCCTTGCACTTCCAAAACTAGAAGAGTTATTACGAAATTGCAGCTTGAGAGGTAACATCCCCAGTGATATTGGGAATTTGAGTAGCTTGATAATTTTAAGCCTGGGAGACAATCAATTGAGCGGGCCAATTCCAAGCTCAATGGGAAGACTACATAATCTTCAACGTTTGGGTATGTTTGATAACACATTGCAAGGATACATTCCAGATGAACTTTGTCAACTAGAACACTTAAGTGCTTTGTCTTTGGGTGGGAATCAACTCTCTGGTTCTGTACCTTCCTGCTTGGGTAATCTAACAGCATCTCTAAGAGGACTATACTTACAGTCCAATTTGTTGAATTCCACAATCCCATCTTCCTTGTGGGGACTTACAGATATCTTGGAACTAGACTTGTCATCCAATTCTCTAATTGGACCTCTATCAGGTGCTGTTGGTAATTTGAAAGTTGCTATATACATACATGTATCATACAACCAATTATCTGGGAGTGTACCAAGTAGCATTGGGAGTTTAGTGAGTTTGATCAGTCTCTCCTTGGCACATAACAATCTAGAAGGCCCTATTCCTAGTTCCTTTGCTACCTGCTTAAGCTTAGAACTGTTGGATTTATCTCGAAATAGTTTCACTGGAGTGATTCCAAAGTCTCTAGAAGCACTCTCATATCTCAAGCATCTGAATTTGTCTTTCAACAGACTCCAAGGAGAAATTCCAAGTGGCGGTCCTTTCAAAAACTTCTCTGCTGAATCATTTGTTTCAAACCATGGACTCTGTGGTGGATCCCAATTTCAAGTTCCACCATGCAAAAGAAAAGCTAGCATATCTATCTTGAAGTATGTTATTTCGGGGATCTTGTCAGCAATGCTTCTAGCGGCCTCCATATTTTGGATGTTGATGTTACGCAGAAAAAAGAATGCAACAGCTGCAGCACATACTATCTTGACACCTCAAGTTTTCTGGAGAAGAGTTTCATACCTAGAGCTCCAACATGCGACAGATGGATTCAATGAAAGCAACTTACTTGGTACTGGGGGTTTTGGCTCAGTATATAAAGGAACATTGTCAGATGGGATAGACGTTGCGATAAAGGTTTTCAATTTGGAGTTAGAAGGGGCATTTGCAAGTTTTGAGGTTGAATGTGAAATGCTAAGTAATGTTCGTCACAGAAATCTTGTCAAGGTCATCAGTTGTTGTAGTCAAATTGATTTCAAAGGTCTTGTGTTGAATTACATGCCTAATGGGAGCCTTGAGAAGTGGTTGTATTCTCAGAATTCTTCTTTGGACTTAGTGCAGAGGTTGGATATAATGATAGATGTTGCATCGGCATTGGATTACCTTCACCATGATTATGAAGTACCTATTGTCCATTGCGATTTGAAGCCGAGCAACATCTTACTAGATGATGATATGGTTGCACATGTTGCTGATTTTGGAATTGCAAAACTCTTGGGTGGAAGAGATTCTATGACTCAAACCATGACCCTGGCCACAATTGGGTATATTGCTCCAGAGTATGGAATGCAAGGAATAGTGACCCGAAGAGGTGATGTGTATAGTTTTGGTATTGTAGTGATGGAAACATTCACAGGAAGGAAGCCAACCGATGAGATCTTTGCTGGGGAAATGAGACTAAATCAATGGGTTGCAAATTTCCTAGTTGCAGATGCGATAGTTGAAGTTGTGGATGCTAGTTTACTTGGAAGCGAGGAGGCTCATGACTTCGTGAGCAAGAGGGACTGCTTATCATCCATTATGAGATTAGCTGTTGCTTGTTCAGCAGAATCACCGGAAGAGAGGATAAACATGCAAGAGGCTGTAGCCATGCTTAAAACAATCAAGATCAAGTTTTCAAAGGACTCTGCTGCAAGAGGTGTGGTGGTGAACCATCGTCCTGTTTCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box

Protein Analysis

851

Amino Acids

92.82

Weight (kDa)

5.97

Isoelectric Point (pI)

32.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 11 - 49 2.4e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 236 - 351 9.1e-07 Leucine-rich repeat region
LRR_8 PF13855 395 - 451 4.9e-08 Leucine rich repeat
Pkinase PF00069 554 - 825 4.6e-40 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 557 - 825 2.7e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011127)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G39450
fragaria_vesca FvH4_1g24840 FvH4_1g24840 FvH4_1g24840
malus_domestica MD15G1134900.v1.1
prunus_persica Prupe.4G275200_v2.0.a1 Prupe.4G275200_v2.0.a1
pyrus_communis pycom15g12170
rosa_chinensis RchiOBHm_Chr2g0122451
rosa_laevigata RLG00000018678
rosa_multiflora Rmu_co8054258.1_g000001 Rmu_sc0003832.1_g000018
rosa_roxburghii Rroxscaffold_2G00121630
rosa_rugosa Rorug02G0238000 Rorug02G0238100
rosa_samantha Rh2AG297400 Rh2BG306200 Rh2CG284500 Rh2DG321000
rosa_wichuraiana Rw2G023660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 477
AasI GACNNNNNNGTC 1 cut(s) 489
Acc36I ACCTGC 1 cut(s) 1247
Acc65I GGTACC 1 cut(s) 275
AccB1I GGYRCC 2 cut(s) 203, 275
AccB7I CCANNNNNTGG 2 cut(s) 1539, 2168
AccBSI CCGCTC 1 cut(s) 777
AciI CCGC 3 cut(s) 777, 1374, 1526
AclI AACGTT 1 cut(s) 820
AclWI GGATC 3 cut(s) 1428, 1441, 1511
AcoI YGGCCR 2 cut(s) 562, 2139
AcsI RAATTY 7 cut(s) 523, 730, 994, 1333, 1362, 1924, 2302
AfaI GTAC 5 cut(s) 277, 930, 1149, 1681, 2010
AfiI CCNNNNNNNGG 6 cut(s) 36, 1079, 1373, 1539, 2148, 2168
AflII CTTAAG 2 cut(s) 886, 1243
AflIII ACRYGT 2 cut(s) 1117, 2071
AgeI ACCGGT 1 cut(s) 36
AjnI CCWGG 2 cut(s) 756, 2136
AjuI GAANNNNNNNTTGG 6 cut(s) 1347, 1379, 1431, 1463, 1916, 1948
AleI CACNNNNGTG 2 cut(s) 888, 1286
Alw21I GWGCWC 1 cut(s) 1638
Alw26I GTCTC 4 cut(s) 756, 1190, 1305, 2275
AlwI GGATC 3 cut(s) 1428, 1441, 1511
AlwNI CAGNNNCTG 1 cut(s) 1085
AoxI GGCC 7 cut(s) 562, 616, 655, 779, 1213, 1527, 2139
ApeKI GCWGC 6 cut(s) 5, 636, 696, 1577, 1580, 2516
ApoI RAATTY 7 cut(s) 523, 730, 994, 1333, 1362, 1924, 2302
AsiGI ACCGGT 1 cut(s) 36
Asp700I GAANNNNTTC 2 cut(s) 1621, 2113
Asp718I GGTACC 1 cut(s) 275
AspLEI GCGC 1 cut(s) 306
AspS9I GGNCC 6 cut(s) 369, 491, 779, 1070, 1214, 1376
AsuHPI GGTGA 7 cut(s) 19, 61, 88, 1985, 2210, 2430, 2545
AsuNHI GCTAGC 1 cut(s) 1469
AvaII GGWCC 4 cut(s) 369, 491, 1070, 1376
BalI TGGCCA 2 cut(s) 564, 2141
BamHI GGATCC 1 cut(s) 1433
BanI GGYRCC 2 cut(s) 203, 275
BanII GRGCYC 2 cut(s) 543, 1638
BarI GAAGNNNNNNTAC 2 cut(s) 669, 701
BbsI GAAGAC 2 cut(s) 85, 808
Bbv12I GWGCWC 1 cut(s) 1638
BbvI GCAGC 6 cut(s) 17, 648, 708, 1564, 1592, 2503
BccI CCATC 9 cut(s) 165, 364, 431, 580, 1015, 1646, 1715, 2221, 2547
BciT130I CCWGG 2 cut(s) 758, 2138
BciVI GTATCC 1 cut(s) 845
BclI TGATCA 1 cut(s) 1179
BcoDI GTCTC 4 cut(s) 756, 1190, 1305, 2275
BfmI CTRYAG 2 cut(s) 1578, 2469
BfrI CTTAAG 2 cut(s) 886, 1243
BfuAI ACCTGC 1 cut(s) 1247
BfuI GTATCC 1 cut(s) 845
BglII AGATCT 1 cut(s) 2262
BisI GCNGC 7 cut(s) 6, 637, 697, 1527, 1578, 1581, 2517
BlsI GCNGC 7 cut(s) 7, 638, 698, 1528, 1579, 1582, 2518
Bme1390I CCNGG 2 cut(s) 758, 2138
Bme18I GGWCC 4 cut(s) 369, 491, 1070, 1376
BmgT120I GGNCC 6 cut(s) 369, 491, 779, 1070, 1214, 1376
BmiI GGNNCC 6 cut(s) 205, 277, 370, 421, 1435, 1898
BmrFI CCNGG 2 cut(s) 758, 2138
BmrI ACTGGG 3 cut(s) 139, 711, 1692
BmsI GCATC 5 cut(s) 965, 1336, 1982, 2308, 2329
BmtI GCTAGC 1 cut(s) 1473
BmuI ACTGGG 3 cut(s) 139, 711, 1692
BpiI GAAGAC 2 cut(s) 85, 808
BpmI CTGGAG 4 cut(s) 236, 1305, 1633, 2145
BpuEI CTTGAG 5 cut(s) 270, 721, 1307, 1587, 1922
BsaJI CCNNGG 5 cut(s) 757, 1191, 1354, 1417, 2136
BsaWI WCCGGW 3 cut(s) 36, 416, 2440
Bsc4I CCNNNNNNNGG 6 cut(s) 36, 1079, 1373, 1539, 2148, 2168
Bse118I RCCGGY 1 cut(s) 36
Bse1I ACTGG 6 cut(s) 63, 107, 134, 717, 1288, 1687
Bse3DI GCAATG 3 cut(s) 842, 1521, 2020
BseBI CCWGG 2 cut(s) 758, 2138
BseDI CCNNGG 5 cut(s) 757, 1191, 1354, 1417, 2136
BseGI GGATG 7 cut(s) 423, 572, 711, 1052, 1548, 2344, 2399
BseLI CCNNNNNNNGG 6 cut(s) 36, 1079, 1373, 1539, 2148, 2168
BseMI GCAATG 3 cut(s) 842, 1521, 2020
BseMII CTCAG 3 cut(s) 501, 1710, 1934
BseNI ACTGG 6 cut(s) 63, 107, 134, 717, 1288, 1687
BseRI GAGGAG 1 cut(s) 2375
BseXI GCAGC 6 cut(s) 17, 648, 708, 1564, 1592, 2503
BseYI CCCAGC 4 cut(s) 220, 427, 643, 2270
BsgI GTGCAG 1 cut(s) 1964
BshFI GGCC 7 cut(s) 564, 618, 657, 781, 1215, 1529, 2141
BshNI GGYRCC 2 cut(s) 203, 275
BshTI ACCGGT 1 cut(s) 36
BsiHKAI GWGCWC 1 cut(s) 1638
BsiSI CCGG 3 cut(s) 37, 417, 2441
BslFI GGGAC 2 cut(s) 1035, 2402
BslI CCNNNNNNNGG 6 cut(s) 36, 1079, 1373, 1539, 2148, 2168
BsmAI GTCTC 4 cut(s) 756, 1190, 1305, 2275
BsmFI GGGAC 2 cut(s) 1035, 2402
BsmI GAATGC 2 cut(s) 1573, 2178
BsnI GGCC 7 cut(s) 564, 618, 657, 781, 1215, 1529, 2141
Bsp1286I GDGCHC 2 cut(s) 543, 1638
Bsp143I GATC 8 cut(s) 193, 244, 466, 1179, 1433, 1503, 2262, 2493
Bsp19I CCATGG 1 cut(s) 1417
BspACI CCGC 3 cut(s) 777, 1374, 1526
BspANI GGCC 7 cut(s) 564, 618, 657, 781, 1215, 1529, 2141
BspCNI CTCAG 3 cut(s) 500, 1709, 1933
BspHI TCATGA 1 cut(s) 2368
BspLI GGNNCC 6 cut(s) 205, 277, 370, 421, 1435, 1898
BspMAI CTGCAG 1 cut(s) 1582
BspMI ACCTGC 1 cut(s) 1247
BspOI GCTAGC 1 cut(s) 1473
BspPI GGATC 3 cut(s) 1428, 1441, 1511
BspQI GCTCTTC 1 cut(s) 51
BspT107I GGYRCC 2 cut(s) 203, 275
BspTI CTTAAG 2 cut(s) 886, 1243
BsrBI CCGCTC 1 cut(s) 777
BsrDI GCAATG 3 cut(s) 842, 1521, 2020
BsrFI RCCGGY 1 cut(s) 36
BsrI ACTGG 6 cut(s) 63, 107, 134, 717, 1288, 1687
BssAI RCCGGY 1 cut(s) 36
BssECI CCNNGG 5 cut(s) 757, 1191, 1354, 1417, 2136
BssMI GATC 8 cut(s) 193, 244, 466, 1179, 1433, 1503, 2262, 2493
BssT1I CCWWGG 3 cut(s) 1191, 1354, 1417
Bst2UI CCWGG 2 cut(s) 758, 2138
Bst4CI ACNGT 2 cut(s) 981, 1257
Bst6I CTCTTC 6 cut(s) 51, 672, 1612, 2104, 2188, 2439
BstAFI CTTAAG 2 cut(s) 886, 1243
BstAPI GCANNNNNTGC 2 cut(s) 1577, 2075
BstC8I GCNNGC 4 cut(s) 298, 302, 779, 1471
BstDEI CTNAG 7 cut(s) 487, 962, 1249, 1696, 1802, 1920, 1939
BstDSI CCRYGG 1 cut(s) 1417
BstENI CCTNNNNNAGG 1 cut(s) 1077
BstF5I GGATG 7 cut(s) 423, 572, 711, 1052, 1548, 2344, 2399
BstHHI GCGC 1 cut(s) 306
BstKTI GATC 8 cut(s) 196, 247, 469, 1182, 1436, 1506, 2265, 2496
BstMAI GTCTC 4 cut(s) 756, 1190, 1305, 2275
BstMBI GATC 8 cut(s) 193, 244, 466, 1179, 1433, 1503, 2262, 2493
BstMWI GCNNNNNNNGC 5 cut(s) 50, 59, 1577, 2075, 2429
BstNI CCWGG 2 cut(s) 758, 2138
BstNSI RCATGY 5 cut(s) 1121, 1646, 1888, 2075, 2461
BstSCI CCNGG 2 cut(s) 756, 2136
BstSFI CTRYAG 2 cut(s) 1578, 2469
BstV1I GCAGC 6 cut(s) 17, 648, 708, 1564, 1592, 2503
BstV2I GAAGAC 2 cut(s) 85, 808
BstX2I RGATCY 3 cut(s) 1433, 1503, 2262
BstXI CCANNNNNNTGG 3 cut(s) 214, 1139, 2137
BstYI RGATCY 3 cut(s) 1433, 1503, 2262
BsuI GTATCC 1 cut(s) 845
BsuRI GGCC 7 cut(s) 564, 618, 657, 781, 1215, 1529, 2141
BtgI CCRYGG 1 cut(s) 1417
BtsCI GGATG 7 cut(s) 423, 572, 711, 1052, 1548, 2344, 2399
BtsIMutI CAGTG 2 cut(s) 724, 1281
BveI ACCTGC 1 cut(s) 1247
Cac8I GCNNGC 4 cut(s) 298, 302, 779, 1471
CaiI CAGNNNCTG 1 cut(s) 1085
CciI TCATGA 1 cut(s) 2368
CfoI GCGC 1 cut(s) 306
Cfr10I RCCGGY 1 cut(s) 36
Cfr13I GGNCC 6 cut(s) 369, 491, 779, 1070, 1214, 1376
Csp6I GTAC 5 cut(s) 276, 929, 1148, 1680, 2009
CspAI ACCGGT 1 cut(s) 36
CspCI CAANNNNNGTGG 4 cut(s) 100, 135, 2508, 2543
CviQI GTAC 5 cut(s) 276, 929, 1148, 1680, 2009
DdeI CTNAG 7 cut(s) 487, 962, 1249, 1696, 1802, 1920, 1939
DpnI GATC 8 cut(s) 195, 246, 468, 1181, 1435, 1505, 2264, 2495
DpnII GATC 8 cut(s) 193, 244, 466, 1179, 1433, 1503, 2262, 2493
DrdI GACNNNNNNGTC 1 cut(s) 489
DseDI GACNNNNNNGTC 1 cut(s) 489
EaeI YGGCCR 2 cut(s) 562, 2139
Eam1104I CTCTTC 6 cut(s) 51, 672, 1612, 2104, 2188, 2439
EarI CTCTTC 6 cut(s) 51, 672, 1612, 2104, 2188, 2439
Ecl136II GAGCTC 1 cut(s) 1636
Eco130I CCWWGG 3 cut(s) 1191, 1354, 1417
Eco147I AGGCCT 1 cut(s) 657
Eco24I GRGCYC 2 cut(s) 543, 1638
Eco32I GATATC 1 cut(s) 1033
Eco47I GGWCC 4 cut(s) 369, 491, 1070, 1376
Eco53kI GAGCTC 1 cut(s) 1636
EcoICRI GAGCTC 1 cut(s) 1636
EcoNI CCTNNNNNAGG 1 cut(s) 1077
EcoO109I RGGNCCY 3 cut(s) 369, 491, 1214
EcoRI GAATTC 2 cut(s) 994, 1924
EcoRII CCWGG 2 cut(s) 756, 2136
EcoRV GATATC 1 cut(s) 1033
EcoT14I CCWWGG 3 cut(s) 1191, 1354, 1417
EcoT38I GRGCYC 2 cut(s) 543, 1638
ErhI CCWWGG 3 cut(s) 1191, 1354, 1417
FaqI GGGAC 2 cut(s) 1035, 2402
FauI CCCGC 1 cut(s) 770
FauNDI CATATG 1 cut(s) 502
FbaI TGATCA 1 cut(s) 1179
Fnu4HI GCNGC 7 cut(s) 6, 637, 697, 1527, 1578, 1581, 2517
FokI GGATG 7 cut(s) 410, 559, 698, 1039, 1555, 2351, 2386
FriOI GRGCYC 2 cut(s) 543, 1638
Fsp4HI GCNGC 7 cut(s) 6, 637, 697, 1527, 1578, 1581, 2517
GlaI GCGC 1 cut(s) 305
GluI GCNGC 7 cut(s) 6, 637, 697, 1527, 1578, 1581, 2517
GsaI CCCAGC 4 cut(s) 224, 431, 647, 2274
GsuI CTGGAG 4 cut(s) 236, 1305, 1633, 2145
HaeIII GGCC 7 cut(s) 564, 618, 657, 781, 1215, 1529, 2141
HapII CCGG 3 cut(s) 37, 417, 2441
HhaI GCGC 1 cut(s) 306
Hin6I GCGC 1 cut(s) 304
HinP1I GCGC 1 cut(s) 304
HincII GTYRAC 2 cut(s) 108, 875
HindII GTYRAC 2 cut(s) 108, 875
HindIII AAGCTT 1 cut(s) 1246
HpaII CCGG 3 cut(s) 37, 417, 2441
HphI GGTGA 7 cut(s) 19, 61, 88, 1985, 2210, 2430, 2545
Hpy166II GTNNAC 5 cut(s) 108, 875, 1148, 2348, 2536
Hpy188I TCNGA 4 cut(s) 395, 1332, 1720, 1923
Hpy8I GTNNAC 5 cut(s) 108, 875, 1148, 2348, 2536
HpyAV CCTTC 5 cut(s) 942, 1205, 1757, 2000, 2238
HpyCH4III ACNGT 2 cut(s) 981, 1257
HpyCH4IV ACGT 2 cut(s) 820, 1731
HpyF10VI GCNNNNNNNGC 5 cut(s) 50, 59, 1577, 2075, 2429
HpyF3I CTNAG 7 cut(s) 487, 962, 1249, 1696, 1802, 1920, 1939
HpySE526I ACGT 2 cut(s) 820, 1731
HspAI GCGC 1 cut(s) 304
KpnI GGTACC 1 cut(s) 279
Ksp22I TGATCA 1 cut(s) 1179
Kzo9I GATC 8 cut(s) 193, 244, 466, 1179, 1433, 1503, 2262, 2493
LguI GCTCTTC 1 cut(s) 51
LmnI GCTCC 4 cut(s) 217, 1641, 1896, 2164
Lsp1109I GCAGC 6 cut(s) 17, 648, 708, 1564, 1592, 2503
LweI GCATC 5 cut(s) 965, 1336, 1982, 2308, 2329
MaeII ACGT 2 cut(s) 820, 1731
MaeIII GTNAC 5 cut(s) 139, 707, 1551, 1814, 2185
MalI GATC 8 cut(s) 195, 246, 468, 1181, 1435, 1505, 2264, 2495
MbiI CCGCTC 1 cut(s) 777
MboI GATC 8 cut(s) 193, 244, 466, 1179, 1433, 1503, 2262, 2493
MfeI CAATTG 2 cut(s) 770, 2145
MflI RGATCY 3 cut(s) 1433, 1503, 2262
MhlI GDGCHC 2 cut(s) 543, 1638
MlsI TGGCCA 2 cut(s) 564, 2141
MluNI TGGCCA 2 cut(s) 564, 2141
MlyI GAGTC 6 cut(s) 147, 477, 1344, 1416, 2116, 2504
MmeI TCCRAC 4 cut(s) 115, 1239, 1663, 1932
Mox20I TGGCCA 2 cut(s) 564, 2141
MroXI GAANNNNTTC 2 cut(s) 1621, 2113
MscI TGGCCA 2 cut(s) 564, 2141
MseI TTAA 7 cut(s) 21, 321, 608, 752, 887, 1244, 2481
MslI CAYNNNNRTG 3 cut(s) 888, 1286, 2001
Msp20I TGGCCA 2 cut(s) 564, 2141
MspA1I CMGCKG 1 cut(s) 1577
MspCI CTTAAG 2 cut(s) 886, 1243
MspI CCGG 3 cut(s) 37, 417, 2441
MspR9I CCNGG 2 cut(s) 758, 2138
MunI CAATTG 2 cut(s) 770, 2145
Mva1269I GAATGC 2 cut(s) 1573, 2178
MvaI CCWGG 2 cut(s) 758, 2138
MwoI GCNNNNNNNGC 5 cut(s) 50, 59, 1577, 2075, 2429
NcoI CCATGG 1 cut(s) 1417
NdeI CATATG 1 cut(s) 502
NdeII GATC 8 cut(s) 193, 244, 466, 1179, 1433, 1503, 2262, 2493
NheI GCTAGC 1 cut(s) 1469
NlaIV GGNNCC 6 cut(s) 205, 277, 370, 421, 1435, 1898
NmeAIII GCCGAG 1 cut(s) 2061
NmuCI GTSAC 3 cut(s) 139, 1814, 2185
NspI RCATGY 5 cut(s) 1121, 1646, 1888, 2075, 2461
OliI CACNNNNGTG 2 cut(s) 888, 1286
PagI TCATGA 1 cut(s) 2368
PceI AGGCCT 1 cut(s) 657
PciI ACATGT 2 cut(s) 1117, 2071
PciSI GCTCTTC 1 cut(s) 51
PctI GAATGC 2 cut(s) 1573, 2178
PdmI GAANNNNTTC 2 cut(s) 1621, 2113
PfeI GAWTC 7 cut(s) 352, 910, 1291, 1400, 1656, 2114, 2435
PflMI CCANNNNNTGG 2 cut(s) 1539, 2168
PinAI ACCGGT 1 cut(s) 36
PkrI GCNGC 7 cut(s) 7, 638, 698, 1528, 1579, 1582, 2518
PleI GAGTC 6 cut(s) 146, 477, 1344, 1416, 2116, 2504
PpsI GAGTC 6 cut(s) 146, 477, 1344, 1416, 2116, 2504
PpuMI RGGWCCY 2 cut(s) 369, 491
PscI ACATGT 2 cut(s) 1117, 2071
PsiI TTATAA 1 cut(s) 477
Psp124BI GAGCTC 1 cut(s) 1638
Psp1406I AACGTT 1 cut(s) 820
Psp5II RGGWCCY 2 cut(s) 369, 491
Psp6I CCWGG 2 cut(s) 756, 2136
PspFI CCCAGC 4 cut(s) 220, 427, 643, 2270
PspGI CCWGG 2 cut(s) 756, 2136
PspN4I GGNNCC 6 cut(s) 205, 277, 370, 421, 1435, 1898
PspPI GGNCC 6 cut(s) 369, 491, 779, 1070, 1214, 1376
PspPPI RGGWCCY 2 cut(s) 369, 491
PsrI GAACNNNNNNTAC 2 cut(s) 170, 202
PstI CTGCAG 1 cut(s) 1582
PstNI CAGNNNCTG 1 cut(s) 1085
PsuI RGATCY 3 cut(s) 1433, 1503, 2262
PvuII CAGCTG 1 cut(s) 1577
RsaI GTAC 5 cut(s) 277, 930, 1149, 1681, 2010
RsaNI GTAC 5 cut(s) 276, 929, 1148, 1680, 2009
RseI CAYNNNNRTG 3 cut(s) 888, 1286, 2001
SacI GAGCTC 1 cut(s) 1638
SapI GCTCTTC 1 cut(s) 51
SaqAI TTAA 7 cut(s) 21, 321, 608, 752, 887, 1244, 2481
SatI GCNGC 7 cut(s) 6, 637, 697, 1527, 1578, 1581, 2517
Sau3AI GATC 8 cut(s) 193, 244, 466, 1179, 1433, 1503, 2262, 2493
Sau96I GGNCC 6 cut(s) 369, 491, 779, 1070, 1214, 1376
SchI GAGTC 6 cut(s) 147, 477, 1344, 1416, 2116, 2504
ScrFI CCNGG 2 cut(s) 758, 2138
SduI GDGCHC 2 cut(s) 543, 1638
SfaNI GCATC 5 cut(s) 965, 1336, 1982, 2308, 2329
SfcI CTRYAG 2 cut(s) 1578, 2469
SinI GGWCC 4 cut(s) 369, 491, 1070, 1376
SmiMI CAYNNNNRTG 3 cut(s) 888, 1286, 2001
SmlI CTYRAG 7 cut(s) 285, 700, 886, 1243, 1322, 1602, 1901
SmoI CTYRAG 7 cut(s) 285, 700, 886, 1243, 1322, 1602, 1901
SseBI AGGCCT 1 cut(s) 657
SsiI CCGC 3 cut(s) 777, 1374, 1526
SspI AATATT 2 cut(s) 390, 438
SstI GAGCTC 1 cut(s) 1638
StuI AGGCCT 1 cut(s) 657
StyD4I CCNGG 2 cut(s) 756, 2136
StyI CCWWGG 3 cut(s) 1191, 1354, 1417
TaaI ACNGT 2 cut(s) 981, 1257
TaiI ACGT 2 cut(s) 823, 1734
TaqI TCGA 3 cut(s) 163, 377, 1270
TaqII GACCGA 1 cut(s) 533
TauI GCSGC 1 cut(s) 1529
TfiI GAWTC 7 cut(s) 352, 910, 1291, 1400, 1656, 2114, 2435
Tru1I TTAA 7 cut(s) 21, 321, 608, 752, 887, 1244, 2481
Tru9I TTAA 7 cut(s) 21, 321, 608, 752, 887, 1244, 2481
TscAI CASTG 2 cut(s) 724, 1288
TseFI GTSAC 3 cut(s) 139, 1814, 2185
TseI GCWGC 6 cut(s) 5, 636, 696, 1577, 1580, 2516
Tsp45I GTSAC 3 cut(s) 139, 1814, 2185
TspDTI ATGAA 5 cut(s) 260, 879, 1614, 1677, 2019
TspRI CASTG 2 cut(s) 724, 1288
Van91I CCANNNNNTGG 2 cut(s) 1539, 2168
Vha464I CTTAAG 2 cut(s) 886, 1243
VpaK11BI GGWCC 4 cut(s) 369, 491, 1070, 1376
XagI CCTNNNNNAGG 1 cut(s) 1077
XapI RAATTY 7 cut(s) 523, 730, 994, 1333, 1362, 1924, 2302
XbaI TCTAGA 2 cut(s) 1207, 1303
XceI RCATGY 5 cut(s) 1121, 1646, 1888, 2075, 2461
XcmI CCANNNNNNNNNTGG 2 cut(s) 1014, 1424
XmnI GAANNNNTTC 2 cut(s) 1621, 2113
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.