f-box protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G39450 |
| fragaria_vesca | FvH4_1g24840 FvH4_1g24840 FvH4_1g24840 |
| malus_domestica | MD15G1134900.v1.1 |
| prunus_persica | Prupe.4G275200_v2.0.a1 Prupe.4G275200_v2.0.a1 |
| pyrus_communis | pycom15g12170 |
| rosa_chinensis | RchiOBHm_Chr2g0122451 |
| rosa_laevigata | RLG00000018678 |
| rosa_multiflora | Rmu_co8054258.1_g000001 Rmu_sc0003832.1_g000018 |
| rosa_roxburghii | Rroxscaffold_2G00121630 |
| rosa_rugosa | Rorug02G0238000 Rorug02G0238100 |
| rosa_samantha | Rh2AG297400 Rh2BG306200 Rh2CG284500 Rh2DG321000 |
| rosa_wichuraiana | Rw2G023660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 507, 1047 |
| AccB1I | GGYRCC | 3 cut(s) | 345, 697, 1753 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 566 |
| AccII | CGCG | 1 cut(s) | 351 |
| AccIII | TCCGGA | 1 cut(s) | 292 |
| AciI | CCGC | 3 cut(s) | 241, 349, 1288 |
| AclWI | GGATC | 3 cut(s) | 1285, 1298, 1520 |
| AcoI | YGGCCR | 1 cut(s) | 1241 |
| AcsI | RAATTY | 3 cut(s) | 118, 759, 1446 |
| AcuI | CTGAAG | 2 cut(s) | 688, 1833 |
| AcyI | GRCGYC | 1 cut(s) | 1872 |
| AfaI | GTAC | 3 cut(s) | 943, 1061, 1459 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 269, 292, 299, 566, 1680 |
| AflII | CTTAAG | 1 cut(s) | 83 |
| AflIII | ACRYGT | 2 cut(s) | 68, 1809 |
| AgeI | ACCGGT | 1 cut(s) | 508 |
| AgsI | TTSAA | 9 cut(s) | 386, 419, 878, 958, 1108, 1119, 1521, 1585, 1658 |
| AjnI | CCWGG | 7 cut(s) | 322, 493, 1037, 1348, 1372, 1416, 1624 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 264, 296 |
| AluBI | AGCT | 6 cut(s) | 27, 298, 367, 597, 622, 949 |
| AluI | AGCT | 6 cut(s) | 27, 298, 367, 597, 622, 949 |
| Alw21I | GWGCWC | 1 cut(s) | 849 |
| Alw26I | GTCTC | 1 cut(s) | 1079 |
| AlwI | GGATC | 3 cut(s) | 1285, 1298, 1520 |
| Ama87I | CYCGRG | 1 cut(s) | 22 |
| Aor13HI | TCCGGA | 1 cut(s) | 292 |
| AoxI | GGCC | 6 cut(s) | 103, 213, 370, 391, 1241, 1343 |
| ApeKI | GCWGC | 3 cut(s) | 111, 622, 949 |
| ApoI | RAATTY | 3 cut(s) | 118, 759, 1446 |
| AseI | ATTAAT | 1 cut(s) | 1008 |
| AsiGI | ACCGGT | 1 cut(s) | 508 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 962 |
| AspLEI | GCGC | 1 cut(s) | 235 |
| AspS9I | GGNCC | 4 cut(s) | 103, 371, 392, 791 |
| AsuC2I | CCSGG | 1 cut(s) | 1638 |
| AsuHPI | GGTGA | 8 cut(s) | 275, 440, 698, 905, 1193, 1658, 1757, 1892 |
| AvaI | CYCGRG | 1 cut(s) | 22 |
| AvaII | GGWCC | 1 cut(s) | 791 |
| AxyI | CCTNAGG | 1 cut(s) | 1876 |
| BaeGI | GKGCMC | 1 cut(s) | 702 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1533, 1566 |
| BalI | TGGCCA | 1 cut(s) | 1243 |
| BamHI | GGATCC | 1 cut(s) | 1290 |
| BanI | GGYRCC | 3 cut(s) | 345, 697, 1753 |
| BanII | GRGCYC | 1 cut(s) | 409 |
| BbsI | GAAGAC | 1 cut(s) | 1020 |
| Bbv12I | GWGCWC | 1 cut(s) | 849 |
| BbvI | GCAGC | 3 cut(s) | 98, 609, 936 |
| BccI | CCATC | 3 cut(s) | 224, 383, 1655 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1241, 1275 |
| BciT130I | CCWGG | 7 cut(s) | 324, 495, 1039, 1350, 1374, 1418, 1626 |
| BciVI | GTATCC | 2 cut(s) | 501, 1534 |
| BcnI | CCSGG | 1 cut(s) | 1638 |
| BcoDI | GTCTC | 1 cut(s) | 1079 |
| BfaI | CTAG | 2 cut(s) | 552, 1692 |
| BfmI | CTRYAG | 1 cut(s) | 1888 |
| BfoI | RGCGCY | 1 cut(s) | 236 |
| BfrI | CTTAAG | 1 cut(s) | 83 |
| BfuAI | ACCTGC | 2 cut(s) | 507, 1047 |
| BfuI | GTATCC | 2 cut(s) | 501, 1534 |
| BisI | GCNGC | 5 cut(s) | 112, 241, 349, 623, 950 |
| BlpI | GCTNAGC | 1 cut(s) | 1486 |
| BlsI | GCNGC | 5 cut(s) | 113, 242, 350, 624, 951 |
| Bme1390I | CCNGG | 8 cut(s) | 324, 495, 1039, 1350, 1374, 1418, 1626, 1638 |
| Bme18I | GGWCC | 1 cut(s) | 791 |
| BmeT110I | CYCGRG | 1 cut(s) | 22 |
| BmgT120I | GGNCC | 4 cut(s) | 103, 371, 392, 791 |
| BmiI | GGNNCC | 7 cut(s) | 347, 408, 699, 774, 1292, 1642, 1755 |
| BmrFI | CCNGG | 8 cut(s) | 324, 495, 1039, 1350, 1374, 1418, 1626, 1638 |
| BmrI | ACTGGG | 1 cut(s) | 1097 |
| BmsI | GCATC | 2 cut(s) | 1163, 1483 |
| BmuI | ACTGGG | 1 cut(s) | 1097 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1020 |
| BpiI | GAAGAC | 1 cut(s) | 1020 |
| BpmI | CTGGAG | 1 cut(s) | 1117 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1486 |
| BpuEI | CTTGAG | 2 cut(s) | 345, 643 |
| BpuMI | CCSGG | 1 cut(s) | 1638 |
| BsaHI | GRCGYC | 1 cut(s) | 1872 |
| BsaJI | CCNNGG | 5 cut(s) | 1037, 1349, 1417, 1535, 1624 |
| BsaWI | WCCGGW | 2 cut(s) | 292, 508 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 269, 292, 299, 566, 1680 |
| Bse118I | RCCGGY | 1 cut(s) | 508 |
| Bse1I | ACTGG | 2 cut(s) | 699, 1092 |
| Bse21I | CCTNAGG | 1 cut(s) | 1876 |
| Bse3DI | GCAATG | 2 cut(s) | 1497, 1706 |
| BseAI | TCCGGA | 1 cut(s) | 292 |
| BseBI | CCWGG | 7 cut(s) | 324, 495, 1039, 1350, 1374, 1418, 1626 |
| BseDI | CCNNGG | 5 cut(s) | 1037, 1349, 1417, 1535, 1624 |
| BseGI | GGATG | 4 cut(s) | 482, 748, 1154, 1474 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 269, 292, 299, 566, 1680 |
| BseMI | GCAATG | 2 cut(s) | 1497, 1706 |
| BseMII | CTCAG | 7 cut(s) | 818, 959, 1155, 1163, 1187, 1500, 1809 |
| BseNI | ACTGG | 2 cut(s) | 699, 1092 |
| BseRI | GAGGAG | 3 cut(s) | 836, 1424, 1874 |
| BseSI | GKGCMC | 1 cut(s) | 702 |
| BseXI | GCAGC | 3 cut(s) | 98, 609, 936 |
| Bsh1236I | CGCG | 1 cut(s) | 351 |
| BshFI | GGCC | 6 cut(s) | 105, 215, 372, 393, 1243, 1345 |
| BshNI | GGYRCC | 3 cut(s) | 345, 697, 1753 |
| BshTI | ACCGGT | 1 cut(s) | 508 |
| BsiHKAI | GWGCWC | 1 cut(s) | 849 |
| BsiHKCI | CYCGRG | 1 cut(s) | 22 |
| BsiSI | CCGG | 4 cut(s) | 115, 293, 509, 1637 |
| BslFI | GGGAC | 3 cut(s) | 167, 827, 1345 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 269, 292, 299, 566, 1680 |
| BsmAI | GTCTC | 1 cut(s) | 1079 |
| BsmFI | GGGAC | 3 cut(s) | 167, 827, 1345 |
| BsmI | GAATGC | 1 cut(s) | 716 |
| BsnI | GGCC | 6 cut(s) | 105, 215, 372, 393, 1243, 1345 |
| BsoBI | CYCGRG | 1 cut(s) | 22 |
| Bsp1286I | GDGCHC | 3 cut(s) | 409, 702, 849 |
| Bsp13I | TCCGGA | 1 cut(s) | 292 |
| Bsp143I | GATC | 5 cut(s) | 863, 937, 979, 1290, 1525 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1486 |
| BspACI | CCGC | 3 cut(s) | 241, 349, 1288 |
| BspANI | GGCC | 6 cut(s) | 105, 215, 372, 393, 1243, 1345 |
| BspCNI | CTCAG | 7 cut(s) | 817, 958, 1156, 1164, 1188, 1499, 1810 |
| BspEI | TCCGGA | 1 cut(s) | 292 |
| BspFNI | CGCG | 1 cut(s) | 351 |
| BspLI | GGNNCC | 7 cut(s) | 347, 408, 699, 774, 1292, 1642, 1755 |
| BspMI | ACCTGC | 2 cut(s) | 507, 1047 |
| BspPI | GGATC | 3 cut(s) | 1285, 1298, 1520 |
| BspT107I | GGYRCC | 3 cut(s) | 345, 697, 1753 |
| BspTI | CTTAAG | 1 cut(s) | 83 |
| BsrDI | GCAATG | 2 cut(s) | 1497, 1706 |
| BsrFI | RCCGGY | 1 cut(s) | 508 |
| BsrI | ACTGG | 2 cut(s) | 699, 1092 |
| BssAI | RCCGGY | 1 cut(s) | 508 |
| BssECI | CCNNGG | 5 cut(s) | 1037, 1349, 1417, 1535, 1624 |
| BssMI | GATC | 5 cut(s) | 863, 937, 979, 1290, 1525 |
| BssNI | GRCGYC | 1 cut(s) | 1872 |
| BssT1I | CCWWGG | 1 cut(s) | 1535 |
| Bst2UI | CCWGG | 7 cut(s) | 324, 495, 1039, 1350, 1374, 1418, 1626 |
| Bst4CI | ACNGT | 4 cut(s) | 140, 440, 608, 1216 |
| Bst6I | CTCTTC | 1 cut(s) | 1391 |
| BstACI | GRCGYC | 1 cut(s) | 1872 |
| BstAFI | CTTAAG | 1 cut(s) | 83 |
| BstC8I | GCNNGC | 2 cut(s) | 29, 1578 |
| BstDEI | CTNAG | 9 cut(s) | 9, 804, 945, 1164, 1172, 1196, 1486, 1818, 1876 |
| BstEII | GGTNACC | 1 cut(s) | 1664 |
| BstF5I | GGATG | 4 cut(s) | 482, 748, 1154, 1474 |
| BstFNI | CGCG | 1 cut(s) | 351 |
| BstH2I | RGCGCY | 1 cut(s) | 236 |
| BstHHI | GCGC | 1 cut(s) | 235 |
| BstKTI | GATC | 5 cut(s) | 866, 940, 982, 1293, 1528 |
| BstMAI | GTCTC | 1 cut(s) | 1079 |
| BstMBI | GATC | 5 cut(s) | 863, 937, 979, 1290, 1525 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 111, 1249 |
| BstNI | CCWGG | 7 cut(s) | 324, 495, 1039, 1350, 1374, 1418, 1626 |
| BstNSI | RCATGY | 4 cut(s) | 72, 1208, 1252, 1580 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1020 |
| BstPI | GGTNACC | 1 cut(s) | 1664 |
| BstSCI | CCNGG | 8 cut(s) | 322, 493, 1037, 1348, 1372, 1416, 1624, 1636 |
| BstSFI | CTRYAG | 1 cut(s) | 1888 |
| BstSLI | GKGCMC | 1 cut(s) | 702 |
| BstUI | CGCG | 1 cut(s) | 351 |
| BstV1I | GCAGC | 3 cut(s) | 98, 609, 936 |
| BstV2I | GAAGAC | 1 cut(s) | 1020 |
| BstX2I | RGATCY | 2 cut(s) | 1290, 1525 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1536 |
| BstYI | RGATCY | 2 cut(s) | 1290, 1525 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1876 |
| BsuI | GTATCC | 2 cut(s) | 501, 1534 |
| BsuRI | GGCC | 6 cut(s) | 105, 215, 372, 393, 1243, 1345 |
| BtsCI | GGATG | 4 cut(s) | 482, 748, 1154, 1474 |
| BtsI | GCAGTG | 1 cut(s) | 1144 |
| BtsIMutI | CAGTG | 5 cut(s) | 604, 692, 727, 1144, 1212 |
| BveI | ACCTGC | 2 cut(s) | 507, 1047 |
| Cac8I | GCNNGC | 2 cut(s) | 29, 1578 |
| CfoI | GCGC | 1 cut(s) | 235 |
| Cfr10I | RCCGGY | 1 cut(s) | 508 |
| Cfr13I | GGNCC | 4 cut(s) | 103, 371, 392, 791 |
| CseI | GACGC | 2 cut(s) | 1025, 1880 |
| Csp6I | GTAC | 3 cut(s) | 942, 1060, 1458 |
| CspAI | ACCGGT | 1 cut(s) | 508 |
| CviQI | GTAC | 3 cut(s) | 942, 1060, 1458 |
| DdeI | CTNAG | 9 cut(s) | 9, 804, 945, 1164, 1172, 1196, 1486, 1818, 1876 |
| DpnI | GATC | 5 cut(s) | 865, 939, 981, 1292, 1527 |
| DpnII | GATC | 5 cut(s) | 863, 937, 979, 1290, 1525 |
| EaeI | YGGCCR | 1 cut(s) | 1241 |
| Eam1104I | CTCTTC | 1 cut(s) | 1391 |
| EarI | CTCTTC | 1 cut(s) | 1391 |
| Eco130I | CCWWGG | 1 cut(s) | 1535 |
| Eco24I | GRGCYC | 1 cut(s) | 409 |
| Eco47I | GGWCC | 1 cut(s) | 791 |
| Eco57I | CTGAAG | 2 cut(s) | 688, 1833 |
| Eco81I | CCTNAGG | 1 cut(s) | 1876 |
| Eco88I | CYCGRG | 1 cut(s) | 22 |
| Eco91I | GGTNACC | 1 cut(s) | 1664 |
| EcoO65I | GGTNACC | 1 cut(s) | 1664 |
| EcoRII | CCWGG | 7 cut(s) | 322, 493, 1037, 1348, 1372, 1416, 1624 |
| EcoT14I | CCWWGG | 1 cut(s) | 1535 |
| EcoT22I | ATGCAT | 2 cut(s) | 1156, 1254 |
| EcoT38I | GRGCYC | 1 cut(s) | 409 |
| ErhI | CCWWGG | 1 cut(s) | 1535 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1370, 1402, 1741, 1773 |
| FaqI | GGGAC | 3 cut(s) | 167, 827, 1345 |
| FauNDI | CATATG | 1 cut(s) | 92 |
| Fnu4HI | GCNGC | 5 cut(s) | 112, 241, 349, 623, 950 |
| FokI | GGATG | 4 cut(s) | 489, 755, 1141, 1461 |
| FriOI | GRGCYC | 1 cut(s) | 409 |
| Fsp4HI | GCNGC | 5 cut(s) | 112, 241, 349, 623, 950 |
| FspBI | CTAG | 2 cut(s) | 552, 1692 |
| GlaI | GCGC | 1 cut(s) | 234 |
| GluI | GCNGC | 5 cut(s) | 112, 241, 349, 623, 950 |
| GsuI | CTGGAG | 1 cut(s) | 1117 |
| HaeII | RGCGCY | 1 cut(s) | 236 |
| HaeIII | GGCC | 6 cut(s) | 105, 215, 372, 393, 1243, 1345 |
| HapII | CCGG | 4 cut(s) | 115, 293, 509, 1637 |
| HgaI | GACGC | 2 cut(s) | 1025, 1880 |
| HhaI | GCGC | 1 cut(s) | 235 |
| Hin1I | GRCGYC | 1 cut(s) | 1872 |
| Hin6I | GCGC | 1 cut(s) | 233 |
| HinP1I | GCGC | 1 cut(s) | 233 |
| HinfI | GANTC | 7 cut(s) | 11, 289, 654, 908, 973, 1553, 1688 |
| HpaII | CCGG | 4 cut(s) | 115, 293, 509, 1637 |
| HphI | GGTGA | 8 cut(s) | 275, 440, 698, 905, 1193, 1658, 1757, 1892 |
| Hpy188I | TCNGA | 8 cut(s) | 10, 46, 834, 856, 968, 1173, 1434, 1870 |
| Hpy188III | TCNNGA | 9 cut(s) | 293, 362, 502, 611, 776, 977, 1307, 1658, 1702 |
| HpyAV | CCTTC | 9 cut(s) | 459, 466, 712, 829, 890, 1527, 1678, 1684, 1767 |
| HpyCH4III | ACNGT | 4 cut(s) | 140, 440, 608, 1216 |
| HpyCH4IV | ACGT | 2 cut(s) | 1467, 1809 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 111, 1249 |
| HpyF3I | CTNAG | 9 cut(s) | 9, 804, 945, 1164, 1172, 1196, 1486, 1818, 1876 |
| HpySE526I | ACGT | 2 cut(s) | 1467, 1809 |
| Hsp92I | GRCGYC | 1 cut(s) | 1872 |
| HspAI | GCGC | 1 cut(s) | 233 |
| Kpn2I | TCCGGA | 1 cut(s) | 292 |
| Kzo9I | GATC | 5 cut(s) | 863, 937, 979, 1290, 1525 |
| LmnI | GCTCC | 3 cut(s) | 295, 412, 1861 |
| Lsp1109I | GCAGC | 3 cut(s) | 98, 609, 936 |
| LweI | GCATC | 2 cut(s) | 1163, 1483 |
| MaeI | CTAG | 2 cut(s) | 552, 1692 |
| MaeII | ACGT | 2 cut(s) | 1467, 1809 |
| MaeIII | GTNAC | 8 cut(s) | 78, 479, 663, 722, 748, 899, 1022, 1664 |
| MalI | GATC | 5 cut(s) | 865, 939, 981, 1292, 1527 |
| MboI | GATC | 5 cut(s) | 863, 937, 979, 1290, 1525 |
| MboII | GAAGA | 7 cut(s) | 398, 741, 873, 1025, 1054, 1218, 1378 |
| MfeI | CAATTG | 3 cut(s) | 786, 953, 1770 |
| MflI | RGATCY | 2 cut(s) | 1290, 1525 |
| MhlI | GDGCHC | 3 cut(s) | 409, 702, 849 |
| MlsI | TGGCCA | 1 cut(s) | 1243 |
| MluNI | TGGCCA | 1 cut(s) | 1243 |
| MlyI | GAGTC | 4 cut(s) | 20, 648, 982, 1697 |
| Mox20I | TGGCCA | 1 cut(s) | 1243 |
| Mph1103I | ATGCAT | 2 cut(s) | 1156, 1254 |
| MroI | TCCGGA | 1 cut(s) | 292 |
| MroXI | GAANNNNTTC | 1 cut(s) | 962 |
| MscI | TGGCCA | 1 cut(s) | 1243 |
| MseI | TTAA | 6 cut(s) | 84, 1008, 1065, 1572, 1719, 1736 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1479 |
| Msp20I | TGGCCA | 1 cut(s) | 1243 |
| MspA1I | CMGCKG | 1 cut(s) | 949 |
| MspCI | CTTAAG | 1 cut(s) | 83 |
| MspI | CCGG | 4 cut(s) | 115, 293, 509, 1637 |
| MspR9I | CCNGG | 8 cut(s) | 324, 495, 1039, 1350, 1374, 1418, 1626, 1638 |
| MunI | CAATTG | 3 cut(s) | 786, 953, 1770 |
| Mva1269I | GAATGC | 1 cut(s) | 716 |
| MvaI | CCWGG | 7 cut(s) | 324, 495, 1039, 1350, 1374, 1418, 1626 |
| MvnI | CGCG | 1 cut(s) | 351 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 111, 1249 |
| NciI | CCSGG | 1 cut(s) | 1638 |
| NdeI | CATATG | 1 cut(s) | 92 |
| NdeII | GATC | 5 cut(s) | 863, 937, 979, 1290, 1525 |
| NlaIV | GGNNCC | 7 cut(s) | 347, 408, 699, 774, 1292, 1642, 1755 |
| NmuCI | GTSAC | 6 cut(s) | 78, 663, 722, 899, 1022, 1664 |
| NsiI | ATGCAT | 2 cut(s) | 1156, 1254 |
| NspI | RCATGY | 4 cut(s) | 72, 1208, 1252, 1580 |
| PaeI | GCATGC | 1 cut(s) | 1580 |
| PaeR7I | CTCGAG | 1 cut(s) | 22 |
| PciI | ACATGT | 1 cut(s) | 68 |
| PctI | GAATGC | 1 cut(s) | 716 |
| PdmI | GAANNNNTTC | 1 cut(s) | 962 |
| PfeI | GAWTC | 3 cut(s) | 289, 908, 1553 |
| PflFI | GACNNNGTC | 1 cut(s) | 1795 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 566 |
| PinAI | ACCGGT | 1 cut(s) | 508 |
| PkrI | GCNGC | 5 cut(s) | 113, 242, 350, 624, 951 |
| PleI | GAGTC | 4 cut(s) | 19, 648, 981, 1696 |
| PpsI | GAGTC | 4 cut(s) | 19, 648, 981, 1696 |
| PscI | ACATGT | 1 cut(s) | 68 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1020 |
| PshBI | ATTAAT | 1 cut(s) | 1008 |
| Psp6I | CCWGG | 7 cut(s) | 322, 493, 1037, 1348, 1372, 1416, 1624 |
| PspEI | GGTNACC | 1 cut(s) | 1664 |
| PspGI | CCWGG | 7 cut(s) | 322, 493, 1037, 1348, 1372, 1416, 1624 |
| PspN4I | GGNNCC | 7 cut(s) | 347, 408, 699, 774, 1292, 1642, 1755 |
| PspPI | GGNCC | 4 cut(s) | 103, 371, 392, 791 |
| PspXI | VCTCGAGB | 1 cut(s) | 22 |
| PsuI | RGATCY | 2 cut(s) | 1290, 1525 |
| PsyI | GACNNNGTC | 1 cut(s) | 1795 |
| PvuII | CAGCTG | 1 cut(s) | 949 |
| RsaI | GTAC | 3 cut(s) | 943, 1061, 1459 |
| RsaNI | GTAC | 3 cut(s) | 942, 1060, 1458 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1479 |
| SaqAI | TTAA | 6 cut(s) | 84, 1008, 1065, 1572, 1719, 1736 |
| SatI | GCNGC | 5 cut(s) | 112, 241, 349, 623, 950 |
| Sau3AI | GATC | 5 cut(s) | 863, 937, 979, 1290, 1525 |
| Sau96I | GGNCC | 4 cut(s) | 103, 371, 392, 791 |
| SchI | GAGTC | 4 cut(s) | 20, 648, 982, 1697 |
| ScrFI | CCNGG | 8 cut(s) | 324, 495, 1039, 1350, 1374, 1418, 1626, 1638 |
| SduI | GDGCHC | 3 cut(s) | 409, 702, 849 |
| SfaNI | GCATC | 2 cut(s) | 1163, 1483 |
| SfcI | CTRYAG | 1 cut(s) | 1888 |
| Sfr274I | CTCGAG | 1 cut(s) | 22 |
| SinI | GGWCC | 1 cut(s) | 791 |
| SlaI | CTCGAG | 1 cut(s) | 22 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1479 |
| SmlI | CTYRAG | 4 cut(s) | 22, 83, 360, 658 |
| SmoI | CTYRAG | 4 cut(s) | 22, 83, 360, 658 |
| SphI | GCATGC | 1 cut(s) | 1580 |
| SsiI | CCGC | 3 cut(s) | 241, 349, 1288 |
| SspI | AATATT | 1 cut(s) | 634 |
| SspMI | CTAG | 2 cut(s) | 552, 1692 |
| StyD4I | CCNGG | 8 cut(s) | 322, 493, 1037, 1348, 1372, 1416, 1624, 1636 |
| StyI | CCWWGG | 1 cut(s) | 1535 |
| TaaI | ACNGT | 4 cut(s) | 140, 440, 608, 1216 |
| TaiI | ACGT | 2 cut(s) | 1470, 1812 |
| TaqI | TCGA | 7 cut(s) | 23, 443, 709, 982, 1234, 1261, 1631 |
| TauI | GCSGC | 2 cut(s) | 243, 351 |
| TfiI | GAWTC | 3 cut(s) | 289, 908, 1553 |
| Tru1I | TTAA | 6 cut(s) | 84, 1008, 1065, 1572, 1719, 1736 |
| Tru9I | TTAA | 6 cut(s) | 84, 1008, 1065, 1572, 1719, 1736 |
| TscAI | CASTG | 5 cut(s) | 611, 699, 727, 1144, 1219 |
| TseFI | GTSAC | 6 cut(s) | 78, 663, 722, 899, 1022, 1664 |
| TseI | GCWGC | 3 cut(s) | 111, 622, 949 |
| Tsp45I | GTSAC | 6 cut(s) | 78, 663, 722, 899, 1022, 1664 |
| TspDTI | ATGAA | 5 cut(s) | 986, 1026, 1486, 1527, 1666 |
| TspGWI | ACGGA | 1 cut(s) | 49 |
| TspRI | CASTG | 5 cut(s) | 611, 699, 727, 1144, 1219 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1795 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 566 |
| Vha464I | CTTAAG | 1 cut(s) | 83 |
| VpaK11BI | GGWCC | 1 cut(s) | 791 |
| VspI | ATTAAT | 1 cut(s) | 1008 |
| XapI | RAATTY | 3 cut(s) | 118, 759, 1446 |
| XceI | RCATGY | 4 cut(s) | 72, 1208, 1252, 1580 |
| XhoI | CTCGAG | 1 cut(s) | 22 |
| XmnI | GAANNNNTTC | 1 cut(s) | 962 |
| XspI | CTAG | 2 cut(s) | 552, 1692 |
| Zsp2I | ATGCAT | 2 cut(s) | 1156, 1254 |