MD15G1143000.v1.1

Inositol-tetrakisphosphate 1-kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Forward (+)
10568677 .. 10573665
4989 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1143000.v1.1.491

Sequence Viewer

Length: 1449 bp
ATGTCAACTTGCAACCAGACGCCCACTTTCTGCTTCATAAGCTCCGCCATTCCAACGTTCCTACGGTCGGGAATTTCTTATGGAGCAGGTCTTGAAGCTCATAAGGTTAGTATTCTCAAAGAAATTGCGGCGCAATATTCCATCCATTGCTTCCTCTTAGATGAATCCGCATCCTCTATAGACGATGCTATACGCGAGGTTATGCTAGCTTGGCCTAATACCGGAGGCCGGATTTTGTATATAGTATCCAACAACAAGGAATACATGTTTCCTAAACTAAGCAAATGCGGTTGGCTTATCACGCTTCTCAATGTTGAAGGCAGCACCGCATCCACATGTGAGAGTTCAAGCATGGTGTATATTAACAAACTACGCGAGTTGCCTTTGACTATTTGCCAAATAAATAGAAAGGCATTTGGAAACAGCGTTGTGACAGTTGGTTATATTATGAAGCCGTCTCGTGAAGAGGATTTCGCTAAGAGGGGTGCATTCCCTATGTATCCTACTCAAGATGGGTTGATGTTCGTTCCCATCACATTTGATCTCCCTCTAGCTCCTCAATTACAAGAAGTTGATGTAGTTCTCCATAAAGCAACTGATGAAATTATATCCATTAATTTGGATGGATCTTTACCATCTTCTACCAGCATAACATACAGCAGGGGAATGCAGGAATTGCAAAGATATATGGAACATCACCTAGACCTCTGTGTGATTGACCCACTTAGCTCCATTTATCCTGTAGTAGATCGATTGAAAATTCAACAGATTCTACTTGGGTTGGAGGATCTCAAAACCGCCGGTTGCTGCGCAATTAGGGGGCCTAATTTTCTTAAGGTTGATGATTTTAACCAGTCTGATTTGGTTCAAAGCCTATCTGAAGCCAAGTTAGCTCTTCCAAGTATAGTAAAACCTCAAGTTGCTTGTGGTGTGGCCGATGCTCATAGCATGGCAATAGTTTTTAGAGTTGAAGATTTCAAGGATTTGACTGTTCCTCTTCCAGCAATTATACAGGAATATGTGGATCATTCATCAACGCTCTACAAATTTTACGTGTTGGGTGAGAAAGTTTATCATGCAGTTAAGAGCTCTACTCCAAATGCAGATGGTTTGAAAAAATTATCTAGAAGTACGGAGCTCAAACCTTTAGTCTTTGACAGCTTAAAATCCTTACCCACTGCAAAAGGGAACCTGAGTTCTGGAGATGGTAATAGCTCAAAGGCCACTATTGATCTTGAGTTGGTTACTAGTGCAGCTAATTGGCTTATGAGAAATCTTGAGCTGACCATCTTCGGCTTCGATGTTGTTATTGAGGAAGGCACCGGCGACCATGTCATTGTCGATGTAAATTACCTCCCATCATTCAAGGAAGTTCCCAACGAAGTTGCTATCCCTGCGTTTTGGGGTGCGATTAAGAAGAAGTTTGAATTAAAAGGAAGAAATAAGTAG

Protein Analysis

483

Amino Acids

53.18

Weight (kDa)

5.69

Isoelectric Point (pI)

36.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ins134_P3_kin PF05770 274 - 460 3.5e-27 Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 811
Acc36I ACCTGC 1 cut(s) 77
AccB1I GGYRCC 1 cut(s) 1319
AccII CGCG 2 cut(s) 195, 375
AciI CCGC 6 cut(s) 45, 128, 168, 288, 327, 798
AclI AACGTT 1 cut(s) 56
AclWI GGATC 3 cut(s) 634, 795, 1032
AcoI YGGCCR 1 cut(s) 933
AcsI RAATTY 3 cut(s) 72, 759, 1046
AcuI CTGAAG 1 cut(s) 900
AcyI GRCGYC 1 cut(s) 20
AfaI GTAC 1 cut(s) 1132
AfiI CCNNNNNNNGG 3 cut(s) 67, 221, 228
AflII CTTAAG 1 cut(s) 833
AflIII ACRYGT 3 cut(s) 264, 335, 1053
AhlI ACTAGT 1 cut(s) 1247
AloI GAACNNNNNNTCC 2 cut(s) 1180, 1212
Alw21I GWGCWC 2 cut(s) 1091, 1140
Alw26I GTCTC 1 cut(s) 462
AlwI GGATC 3 cut(s) 634, 795, 1032
AoxI GGCC 5 cut(s) 212, 226, 821, 933, 1221
ApeKI GCWGC 3 cut(s) 321, 807, 1253
ApoI RAATTY 3 cut(s) 72, 759, 1046
ArsI GACNNNNNNTTYG 2 cut(s) 1134, 1166
AseI ATTAAT 1 cut(s) 615
AspLEI GCGC 2 cut(s) 133, 812
AspS9I GGNCC 1 cut(s) 821
AsuHPI GGTGA 2 cut(s) 689, 1073
AsuNHI GCTAGC 1 cut(s) 205
BanI GGYRCC 1 cut(s) 1319
BanII GRGCYC 2 cut(s) 1091, 1140
BauI CACGAG 1 cut(s) 459
Bbv12I GWGCWC 2 cut(s) 1091, 1140
BbvI GCAGC 3 cut(s) 333, 794, 1265
BccI CCATC 9 cut(s) 149, 506, 539, 617, 643, 1100, 1199, 1295, 1366
BceAI ACGGC 1 cut(s) 439
BciVI GTATCC 2 cut(s) 256, 510
BcoDI GTCTC 1 cut(s) 462
BcuI ACTAGT 1 cut(s) 1247
BfaI CTAG 5 cut(s) 206, 551, 701, 1125, 1248
BfmI CTRYAG 2 cut(s) 177, 741
BfrI CTTAAG 1 cut(s) 833
BfuAI ACCTGC 1 cut(s) 77
BfuI GTATCC 2 cut(s) 256, 510
BisI GCNGC 4 cut(s) 129, 322, 808, 1254
BlsI GCNGC 4 cut(s) 130, 323, 809, 1255
BmgT120I GGNCC 1 cut(s) 821
BmiI GGNNCC 3 cut(s) 822, 1190, 1321
BmsI GCATC 4 cut(s) 175, 179, 338, 928
BmtI GCTAGC 1 cut(s) 209
BplI GAGNNNNNCTC 2 cut(s) 1078, 1110
BpmI CTGGAG 1 cut(s) 1221
BpuEI CTTGAG 4 cut(s) 492, 900, 1256, 1298
Bsa29I ATCGAT 1 cut(s) 751
BsaAI YACGTR 1 cut(s) 1054
BsaHI GRCGYC 1 cut(s) 20
BsaWI WCCGGW 1 cut(s) 221
Bsc4I CCNNNNNNNGG 3 cut(s) 67, 221, 228
Bse118I RCCGGY 2 cut(s) 800, 1322
Bse1I ACTGG 1 cut(s) 853
Bse3DI GCAATG 1 cut(s) 145
BseCI ATCGAT 1 cut(s) 751
BseGI GGATG 4 cut(s) 141, 170, 329, 628
BseLI CCNNNNNNNGG 3 cut(s) 67, 221, 228
BseMI GCAATG 1 cut(s) 145
BseMII CTCAG 1 cut(s) 1184
BseNI ACTGG 1 cut(s) 853
BseRI GAGGAG 1 cut(s) 546
BseXI GCAGC 3 cut(s) 333, 794, 1265
BsgI GTGCAG 1 cut(s) 1272
Bsh1236I CGCG 2 cut(s) 195, 375
Bsh1285I CGRYCG 1 cut(s) 68
BshFI GGCC 5 cut(s) 214, 228, 823, 935, 1223
BshNI GGYRCC 1 cut(s) 1319
BshVI ATCGAT 1 cut(s) 751
BsiEI CGRYCG 1 cut(s) 68
BsiHKAI GWGCWC 2 cut(s) 1091, 1140
BsiSI CCGG 4 cut(s) 222, 229, 801, 1323
BslI CCNNNNNNNGG 3 cut(s) 67, 221, 228
BsmAI GTCTC 1 cut(s) 462
BsmBI CGTCTC 1 cut(s) 462
BsmI GAATGC 2 cut(s) 488, 672
BsnI GGCC 5 cut(s) 214, 228, 823, 935, 1223
Bsp1286I GDGCHC 2 cut(s) 1091, 1140
Bsp143I GATC 6 cut(s) 541, 626, 748, 787, 1024, 1231
BspACI CCGC 6 cut(s) 45, 128, 168, 288, 327, 798
BspANI GGCC 5 cut(s) 214, 228, 823, 935, 1223
BspCNI CTCAG 1 cut(s) 1185
BspDI ATCGAT 1 cut(s) 751
BspFNI CGCG 2 cut(s) 195, 375
BspLI GGNNCC 3 cut(s) 822, 1190, 1321
BspMI ACCTGC 1 cut(s) 77
BspOI GCTAGC 1 cut(s) 209
BspPI GGATC 3 cut(s) 634, 795, 1032
BspQI GCTCTTC 1 cut(s) 900
BspT107I GGYRCC 1 cut(s) 1319
BspTI CTTAAG 1 cut(s) 833
BsrDI GCAATG 1 cut(s) 145
BsrFI RCCGGY 2 cut(s) 800, 1322
BsrI ACTGG 1 cut(s) 853
BssAI RCCGGY 2 cut(s) 800, 1322
BssMI GATC 6 cut(s) 541, 626, 748, 787, 1024, 1231
BssNI GRCGYC 1 cut(s) 20
BssSI CACGAG 1 cut(s) 459
Bst2BI CACGAG 1 cut(s) 459
Bst4CI ACNGT 3 cut(s) 66, 436, 991
Bst6I CTCTTC 3 cut(s) 459, 900, 1002
BstACI GRCGYC 1 cut(s) 20
BstAFI CTTAAG 1 cut(s) 833
BstAPI GCANNNNNTGC 1 cut(s) 676
BstBAI YACGTR 1 cut(s) 1054
BstC8I GCNNGC 1 cut(s) 207
BstDEI CTNAG 5 cut(s) 157, 278, 477, 725, 1193
BstF5I GGATG 4 cut(s) 141, 170, 329, 628
BstFNI CGCG 2 cut(s) 195, 375
BstHHI GCGC 2 cut(s) 133, 812
BstKTI GATC 6 cut(s) 544, 629, 751, 790, 1027, 1234
BstMAI GTCTC 1 cut(s) 462
BstMBI GATC 6 cut(s) 541, 626, 748, 787, 1024, 1231
BstMCI CGRYCG 1 cut(s) 68
BstMWI GCNNNNNNNGC 6 cut(s) 39, 211, 301, 676, 890, 1394
BstNSI RCATGY 2 cut(s) 268, 339
BstSFI CTRYAG 2 cut(s) 177, 741
BstUI CGCG 2 cut(s) 195, 375
BstV1I GCAGC 3 cut(s) 333, 794, 1265
BstX2I RGATCY 2 cut(s) 626, 787
BstXI CCANNNNNNTGG 1 cut(s) 619
BstYI RGATCY 2 cut(s) 626, 787
Bsu15I ATCGAT 1 cut(s) 751
BsuI GTATCC 2 cut(s) 256, 510
BsuRI GGCC 5 cut(s) 214, 228, 823, 935, 1223
BsuTUI ATCGAT 1 cut(s) 751
BtsCI GGATG 4 cut(s) 141, 170, 329, 628
BtsI GCAGTG 1 cut(s) 1176
BtsIMutI CAGTG 1 cut(s) 1176
BveI ACCTGC 1 cut(s) 77
Cac8I GCNNGC 1 cut(s) 207
CfoI GCGC 2 cut(s) 133, 812
Cfr10I RCCGGY 2 cut(s) 800, 1322
Cfr13I GGNCC 1 cut(s) 821
ClaI ATCGAT 1 cut(s) 751
CseI GACGC 1 cut(s) 28
Csp6I GTAC 1 cut(s) 1131
CviAII CATG 6 cut(s) 265, 336, 352, 949, 1076, 1331
CviQI GTAC 1 cut(s) 1131
DdeI CTNAG 5 cut(s) 157, 278, 477, 725, 1193
DpnI GATC 6 cut(s) 543, 628, 750, 789, 1026, 1233
DpnII GATC 6 cut(s) 541, 626, 748, 787, 1024, 1231
EaeI YGGCCR 1 cut(s) 933
Eam1104I CTCTTC 3 cut(s) 459, 900, 1002
EarI CTCTTC 3 cut(s) 459, 900, 1002
EciI GGCGGA 1 cut(s) 34
Ecl136II GAGCTC 2 cut(s) 1089, 1138
Eco24I GRGCYC 2 cut(s) 1091, 1140
Eco53kI GAGCTC 2 cut(s) 1089, 1138
Eco57I CTGAAG 1 cut(s) 900
EcoICRI GAGCTC 2 cut(s) 1089, 1138
EcoO109I RGGNCCY 1 cut(s) 821
EcoT38I GRGCYC 2 cut(s) 1091, 1140
Esp3I CGTCTC 1 cut(s) 462
FaeI CATG 6 cut(s) 268, 339, 355, 952, 1079, 1334
FatI CATG 6 cut(s) 264, 335, 351, 948, 1075, 1330
Fnu4HI GCNGC 4 cut(s) 129, 322, 808, 1254
FokI GGATG 4 cut(s) 128, 157, 316, 635
FriOI GRGCYC 2 cut(s) 1091, 1140
Fsp4HI GCNGC 4 cut(s) 129, 322, 808, 1254
FspBI CTAG 5 cut(s) 206, 551, 701, 1125, 1248
FspI TGCGCA 1 cut(s) 811
GlaI GCGC 2 cut(s) 132, 811
GluI GCNGC 4 cut(s) 129, 322, 808, 1254
GsuI CTGGAG 1 cut(s) 1221
HaeIII GGCC 5 cut(s) 214, 228, 823, 935, 1223
HapII CCGG 4 cut(s) 222, 229, 801, 1323
HgaI GACGC 1 cut(s) 28
HhaI GCGC 2 cut(s) 133, 812
Hin1I GRCGYC 1 cut(s) 20
Hin1II CATG 6 cut(s) 268, 339, 355, 952, 1079, 1334
Hin6I GCGC 2 cut(s) 131, 810
HinP1I GCGC 2 cut(s) 131, 810
HincII GTYRAC 1 cut(s) 6
HindII GTYRAC 1 cut(s) 6
HinfI GANTC 2 cut(s) 164, 769
HpaII CCGG 4 cut(s) 222, 229, 801, 1323
HphI GGTGA 2 cut(s) 689, 1073
Hpy166II GTNNAC 1 cut(s) 6
Hpy188I TCNGA 2 cut(s) 859, 880
Hpy188III TCNNGA 8 cut(s) 69, 92, 461, 509, 1125, 1200, 1235, 1277
Hpy8I GTNNAC 1 cut(s) 6
HpyAV CCTTC 2 cut(s) 311, 1310
HpyCH4III ACNGT 3 cut(s) 66, 436, 991
HpyCH4IV ACGT 2 cut(s) 56, 1053
HpyCH4V TGCA 8 cut(s) 12, 488, 670, 679, 1079, 1103, 1181, 1253
HpyF10VI GCNNNNNNNGC 6 cut(s) 39, 211, 301, 676, 890, 1394
HpyF3I CTNAG 5 cut(s) 157, 278, 477, 725, 1193
HpySE526I ACGT 2 cut(s) 56, 1053
Hsp92I GRCGYC 1 cut(s) 20
Hsp92II CATG 6 cut(s) 268, 339, 355, 952, 1079, 1334
HspAI GCGC 2 cut(s) 131, 810
Kzo9I GATC 6 cut(s) 541, 626, 748, 787, 1024, 1231
LguI GCTCTTC 1 cut(s) 900
LmnI GCTCC 5 cut(s) 47, 83, 559, 734, 1135
Lsp1109I GCAGC 3 cut(s) 333, 794, 1265
LweI GCATC 4 cut(s) 175, 179, 338, 928
MaeI CTAG 5 cut(s) 206, 551, 701, 1125, 1248
MaeII ACGT 2 cut(s) 56, 1053
MaeIII GTNAC 2 cut(s) 430, 1243
MalI GATC 6 cut(s) 543, 628, 750, 789, 1026, 1233
MboI GATC 6 cut(s) 541, 626, 748, 787, 1024, 1231
MboII GAAGA 8 cut(s) 476, 630, 887, 983, 989, 1282, 1429, 1449
MflI RGATCY 2 cut(s) 626, 787
MhlI GDGCHC 2 cut(s) 1091, 1140
MmeI TCCRAC 3 cut(s) 77, 273, 762
MseI TTAA 8 cut(s) 363, 615, 834, 849, 1083, 1163, 1413, 1430
MslI CAYNNNNRTG 1 cut(s) 334
MspCI CTTAAG 1 cut(s) 833
MspI CCGG 4 cut(s) 222, 229, 801, 1323
Mva1269I GAATGC 2 cut(s) 488, 672
MvnI CGCG 2 cut(s) 195, 375
MwoI GCNNNNNNNGC 6 cut(s) 39, 211, 301, 676, 890, 1394
NdeII GATC 6 cut(s) 541, 626, 748, 787, 1024, 1231
NheI GCTAGC 1 cut(s) 205
NlaIII CATG 6 cut(s) 268, 339, 355, 952, 1079, 1334
NlaIV GGNNCC 3 cut(s) 822, 1190, 1321
NmuCI GTSAC 1 cut(s) 430
NsbI TGCGCA 1 cut(s) 811
NspI RCATGY 2 cut(s) 268, 339
PciI ACATGT 2 cut(s) 264, 335
PciSI GCTCTTC 1 cut(s) 900
PctI GAATGC 2 cut(s) 488, 672
PfeI GAWTC 2 cut(s) 164, 769
PflFI GACNNNGTC 1 cut(s) 1331
PkrI GCNGC 4 cut(s) 130, 323, 809, 1255
Ppu21I YACGTR 1 cut(s) 1054
PscI ACATGT 2 cut(s) 264, 335
PshBI ATTAAT 1 cut(s) 615
Psp124BI GAGCTC 2 cut(s) 1091, 1140
Psp1406I AACGTT 1 cut(s) 56
PspN4I GGNNCC 3 cut(s) 822, 1190, 1321
PspPI GGNCC 1 cut(s) 821
PsuI RGATCY 2 cut(s) 626, 787
PsyI GACNNNGTC 1 cut(s) 1331
RsaI GTAC 1 cut(s) 1132
RsaNI GTAC 1 cut(s) 1131
RseI CAYNNNNRTG 1 cut(s) 334
SacI GAGCTC 2 cut(s) 1091, 1140
SapI GCTCTTC 1 cut(s) 900
SaqAI TTAA 8 cut(s) 363, 615, 834, 849, 1083, 1163, 1413, 1430
SatI GCNGC 4 cut(s) 129, 322, 808, 1254
Sau3AI GATC 6 cut(s) 541, 626, 748, 787, 1024, 1231
Sau96I GGNCC 1 cut(s) 821
SduI GDGCHC 2 cut(s) 1091, 1140
SfaNI GCATC 4 cut(s) 175, 179, 338, 928
SfcI CTRYAG 2 cut(s) 177, 741
SgrAI CRCCGGYG 1 cut(s) 1322
SmiMI CAYNNNNRTG 1 cut(s) 334
SmlI CTYRAG 5 cut(s) 507, 833, 915, 1235, 1277
SmoI CTYRAG 5 cut(s) 507, 833, 915, 1235, 1277
SpeI ACTAGT 1 cut(s) 1247
SsiI CCGC 6 cut(s) 45, 128, 168, 288, 327, 798
SspI AATATT 1 cut(s) 137
SspMI CTAG 5 cut(s) 206, 551, 701, 1125, 1248
SstI GAGCTC 2 cut(s) 1091, 1140
TaaI ACNGT 3 cut(s) 66, 436, 991
TaiI ACGT 2 cut(s) 59, 1056
TaqI TCGA 3 cut(s) 751, 1299, 1341
TauI GCSGC 1 cut(s) 131
TfiI GAWTC 2 cut(s) 164, 769
Tru1I TTAA 8 cut(s) 363, 615, 834, 849, 1083, 1163, 1413, 1430
Tru9I TTAA 8 cut(s) 363, 615, 834, 849, 1083, 1163, 1413, 1430
TscAI CASTG 1 cut(s) 1183
TseFI GTSAC 1 cut(s) 430
TseI GCWGC 3 cut(s) 321, 807, 1253
Tsp45I GTSAC 1 cut(s) 430
TspDTI ATGAA 5 cut(s) 25, 177, 464, 615, 1020
TspGWI ACGGA 1 cut(s) 1148
TspRI CASTG 1 cut(s) 1183
Tth111I GACNNNGTC 1 cut(s) 1331
Vha464I CTTAAG 1 cut(s) 833
VspI ATTAAT 1 cut(s) 615
XapI RAATTY 3 cut(s) 72, 759, 1046
XbaI TCTAGA 1 cut(s) 1124
XceI RCATGY 2 cut(s) 268, 339
XspI CTAG 5 cut(s) 206, 551, 701, 1125, 1248
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.