Rorug01G0454400

Inositol-tetrakisphosphate 1-kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
54926492 .. 54928217
1726 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0454400.1

Sequence Viewer

Length: 1482 bp
ATGTCCATATCGTCTCAAGATAACAGAATACACAGATATAAAACAAACTCAGACGATGCTGCGAAAGAGCTATCTAGGGTTTTCTTTCCAAGGTCGATGATGGCTGATGAAGAAGACAACAGAGTTAGAAGCCTGAGTGATTTACCCGATAATGTTCTTGGCCACGTCTTATCCTTTCTACCAACACAAGAAGCCTCTAGAACGAGCATATTATCAAAAAGTTGGCGATACTTATGGTCATTGACTCCCAACCTTGACTTGGATGATCAAAGAGCCTATAACCCTAACAATTACTTAACACACTCGACAAATCTCCTCTTTCTCAATTATGTGGAAAGGTCCATCTCTCTTCGAAAATTCACCAAGAGCTTCCATCTCAAATTCAGCATTTATGATGATCGATCGAATCGACATGATGTCTCTTCCTTGGAGTCTTGGATCACTGGTCTGGTTAAGCGTAACGTTGAAGCTGTATCACTATCTCTACATATACACCGGCGAGTAATATCGATTGATTTTCCTGATTGCTTTTTGTCTTGCAAAACACTTGTGGATTTTGAAATCGAATCCACCAAGGCTGGAGCCCTGGTAATTTACATCCCCGAACCTCTTCGTCCCTCGATGTGTTTCTCAAGTCTCAAAACCTTGAGTTTCATAAACGTAACATTTACAAATGAAGACTCTACCAATCAACTATTTTCTAGCTGCCCGGTCCTTGAAGAGTTGACTTTGAATCAATGTCGGTGGTGGGATATCAAGGCTCTCAATGTTCTTGCGCCGAAGCTCCTGAGGTTAACTATAATCGAACCTGCCTACAATGCAAATGAACCAGAAGAATTTCGGAATTGCCGGATCGCAGTTCTTGGAACTAATCTCATGCATTTCAAGTATGAAGGTATCTTCAGGCACGAGTATTACTTATGCAATTCACCATCACTGGATAAGGCATGCATTGAGGGGTTTCCAAAGGTTTTGGAACACGGCTACTATCGATTGTATAGGATTCTTCGGTGTATCTCTAATCTAAAAGATTTAGAGATTCGGCTGGTTCCAAAAGTTGAAGAACAAGACCTATATAATATGCCCATGTTCAAGAACGTAACCCGTTTGCATATATTATCGAGGGTTAAAGGGAATGGATTGATGAAGATCCTGCAGAACTCTCCTTCTCTTTCTGAAATTCTCATATTCTATGAGGGAATTTATCTACCCTTTGATATAGAATCTCTGCCTTTGTGTCTGTCACATTTGAAGAACATAGAGTTTCGTGTGTATGGAAATGAAATAATAACTTCGGAAAATGCATTCAAGTATTTGCTAGAAAATGCATTTGTTTTGAAGAAGATGATTATTTCATTCTATTGGACCGGTTCATTGACTTCATTCTCTGGAGACGAAGAAAACTTCAGAAAGTACATTTTGGAACTTCCCCGAAGATCAAAAGATTGTGAAGTATATGTTTCATTCTTTATATCGTGGTGA

Protein Analysis

493

Amino Acids

57.55

Weight (kDa)

6.87

Isoelectric Point (pI)

52.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 45 - 80 3.4e-08 F-box domain
LRR_At1g61320_AtMIF1 PF23622 122 - 347 1.3e-08 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 143 - 262 1e-07 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 817
AclI AACGTT 1 cut(s) 462
AclWI GGATC 3 cut(s) 446, 860, 1144
AcoI YGGCCR 1 cut(s) 160
AcsI RAATTY 5 cut(s) 356, 380, 836, 1179, 1200
AcuI CTGAAG 2 cut(s) 886, 1390
AfaI GTAC 1 cut(s) 1415
AfiI CCNNNNNNNGG 1 cut(s) 259
AgeI ACCGGT 1 cut(s) 1367
AhdI GACNNNNNGTC 1 cut(s) 416
AjiI CACGTC 1 cut(s) 166
AjnI CCWGG 1 cut(s) 585
AluBI AGCT 5 cut(s) 70, 369, 470, 705, 784
AluI AGCT 5 cut(s) 70, 369, 470, 705, 784
Alw26I GTCTC 4 cut(s) 18, 424, 641, 1386
AlwI GGATC 3 cut(s) 446, 860, 1144
AoxI GGCC 1 cut(s) 160
ApeKI GCWGC 2 cut(s) 59, 705
ApoI RAATTY 5 cut(s) 356, 380, 836, 1179, 1200
AsiGI ACCGGT 1 cut(s) 1367
Asp700I GAANNNNTTC 2 cut(s) 609, 837
AspLEI GCGC 1 cut(s) 778
AspS9I GGNCC 3 cut(s) 339, 712, 1365
AsuC2I CCSGG 1 cut(s) 710
AsuHPI GGTGA 2 cut(s) 352, 921
AsuII TTCGAA 1 cut(s) 352
AvaII GGWCC 3 cut(s) 339, 712, 1365
AxyI CCTNAGG 1 cut(s) 788
BalI TGGCCA 1 cut(s) 162
BanII GRGCYC 1 cut(s) 586
BauI CACGAG 1 cut(s) 908
BbsI GAAGAC 2 cut(s) 120, 684
BbvI GCAGC 2 cut(s) 46, 692
BccI CCATC 4 cut(s) 94, 350, 381, 940
BceAI ACGGC 1 cut(s) 997
BciT130I CCWGG 1 cut(s) 587
BclI TGATCA 1 cut(s) 265
BcnI CCSGG 1 cut(s) 710
BcoDI GTCTC 4 cut(s) 18, 424, 641, 1386
BfaI CTAG 4 cut(s) 75, 198, 702, 1319
BfmI CTRYAG 1 cut(s) 1154
BfuAI ACCTGC 1 cut(s) 817
BisI GCNGC 2 cut(s) 60, 706
BlsI GCNGC 2 cut(s) 61, 707
Bme1390I CCNGG 2 cut(s) 587, 710
Bme18I GGWCC 3 cut(s) 339, 712, 1365
BmeRI GACNNNNNGTC 1 cut(s) 416
BmgBI CACGTC 1 cut(s) 166
BmgT120I GGNCC 3 cut(s) 339, 712, 1365
BmiI GGNNCC 2 cut(s) 583, 1050
BmrFI CCNGG 2 cut(s) 587, 710
BmsI GCATC 1 cut(s) 46
BpiI GAAGAC 2 cut(s) 120, 684
BpmI CTGGAG 2 cut(s) 600, 1410
Bpu14I TTCGAA 1 cut(s) 352
BpuEI CTTGAG 2 cut(s) 616, 667
BpuMI CCSGG 1 cut(s) 710
Bsa29I ATCGAT 3 cut(s) 400, 509, 991
BsaBI GATNNNNATC 1 cut(s) 1148
BsaJI CCNNGG 4 cut(s) 89, 426, 573, 585
BsaWI WCCGGW 1 cut(s) 1367
BsaXI ACNNNNNCTCC 2 cut(s) 573, 603
Bsc4I CCNNNNNNNGG 1 cut(s) 259
Bse118I RCCGGY 2 cut(s) 495, 1367
Bse1I ACTGG 2 cut(s) 448, 942
Bse21I CCTNAGG 1 cut(s) 788
Bse8I GATNNNNATC 1 cut(s) 1148
BseBI CCWGG 1 cut(s) 587
BseCI ATCGAT 3 cut(s) 400, 509, 991
BseDI CCNNGG 4 cut(s) 89, 426, 573, 585
BseGI GGATG 2 cut(s) 268, 597
BseJI GATNNNNATC 1 cut(s) 1148
BseLI CCNNNNNNNGG 1 cut(s) 259
BseMII CTCAG 3 cut(s) 63, 125, 779
BseNI ACTGG 2 cut(s) 448, 942
BseRI GAGGAG 1 cut(s) 305
BseXI GCAGC 2 cut(s) 46, 692
Bsh1285I CGRYCG 1 cut(s) 404
BshFI GGCC 1 cut(s) 162
BshTI ACCGGT 1 cut(s) 1367
BshVI ATCGAT 3 cut(s) 400, 509, 991
BsiEI CGRYCG 1 cut(s) 404
BsiSI CCGG 4 cut(s) 496, 710, 850, 1368
BslFI GGGAC 1 cut(s) 600
BslI CCNNNNNNNGG 1 cut(s) 259
BsmAI GTCTC 4 cut(s) 18, 424, 641, 1386
BsmBI CGTCTC 2 cut(s) 18, 1386
BsmFI GGGAC 1 cut(s) 600
BsmI GAATGC 1 cut(s) 1304
BsnI GGCC 1 cut(s) 162
Bsp119I TTCGAA 1 cut(s) 352
Bsp1286I GDGCHC 1 cut(s) 586
Bsp143I GATC 7 cut(s) 265, 397, 401, 438, 852, 1149, 1436
BspANI GGCC 1 cut(s) 162
BspCNI CTCAG 3 cut(s) 62, 126, 780
BspDI ATCGAT 3 cut(s) 400, 509, 991
BspLI GGNNCC 2 cut(s) 583, 1050
BspMAI CTGCAG 1 cut(s) 1158
BspMI ACCTGC 1 cut(s) 817
BspPI GGATC 3 cut(s) 446, 860, 1144
BspT104I TTCGAA 1 cut(s) 352
BsrFI RCCGGY 2 cut(s) 495, 1367
BsrI ACTGG 2 cut(s) 448, 942
BssAI RCCGGY 2 cut(s) 495, 1367
BssECI CCNNGG 4 cut(s) 89, 426, 573, 585
BssMI GATC 7 cut(s) 265, 397, 401, 438, 852, 1149, 1436
BssSI CACGAG 1 cut(s) 908
BssT1I CCWWGG 3 cut(s) 89, 426, 573
Bst2BI CACGAG 1 cut(s) 908
Bst2UI CCWGG 1 cut(s) 587
Bst6I CTCTTC 4 cut(s) 354, 427, 615, 714
BstBI TTCGAA 1 cut(s) 352
BstC8I GCNNGC 1 cut(s) 949
BstDEI CTNAG 3 cut(s) 49, 134, 788
BstF5I GGATG 2 cut(s) 268, 597
BstHHI GCGC 1 cut(s) 778
BstKTI GATC 7 cut(s) 268, 400, 404, 441, 855, 1152, 1439
BstMAI GTCTC 4 cut(s) 18, 424, 641, 1386
BstMBI GATC 7 cut(s) 265, 397, 401, 438, 852, 1149, 1436
BstMCI CGRYCG 1 cut(s) 404
BstMWI GCNNNNNNNGC 1 cut(s) 818
BstNI CCWGG 1 cut(s) 587
BstNSI RCATGY 1 cut(s) 951
BstSCI CCNGG 2 cut(s) 585, 708
BstSFI CTRYAG 1 cut(s) 1154
BstV1I GCAGC 2 cut(s) 46, 692
BstV2I GAAGAC 2 cut(s) 120, 684
BstX2I RGATCY 1 cut(s) 1149
BstYI RGATCY 1 cut(s) 1149
Bsu15I ATCGAT 3 cut(s) 400, 509, 991
Bsu36I CCTNAGG 1 cut(s) 788
BsuRI GGCC 1 cut(s) 162
BsuTUI ATCGAT 3 cut(s) 400, 509, 991
BtrI CACGTC 1 cut(s) 166
BtsCI GGATG 2 cut(s) 268, 597
BtsIMutI CAGTG 2 cut(s) 441, 935
BveI ACCTGC 1 cut(s) 817
Cac8I GCNNGC 1 cut(s) 949
CfoI GCGC 1 cut(s) 778
Cfr10I RCCGGY 2 cut(s) 495, 1367
Cfr13I GGNCC 3 cut(s) 339, 712, 1365
ClaI ATCGAT 3 cut(s) 400, 509, 991
Csp6I GTAC 1 cut(s) 1414
CspAI ACCGGT 1 cut(s) 1367
CspCI CAANNNNNGTGG 2 cut(s) 725, 760
CviAII CATG 4 cut(s) 413, 877, 948, 1087
CviQI GTAC 1 cut(s) 1414
DdeI CTNAG 3 cut(s) 49, 134, 788
DpnI GATC 7 cut(s) 267, 399, 403, 440, 854, 1151, 1438
DpnII GATC 7 cut(s) 265, 397, 401, 438, 852, 1149, 1436
DriI GACNNNNNGTC 1 cut(s) 416
EaeI YGGCCR 1 cut(s) 160
Eam1104I CTCTTC 4 cut(s) 354, 427, 615, 714
Eam1105I GACNNNNNGTC 1 cut(s) 416
EarI CTCTTC 4 cut(s) 354, 427, 615, 714
Eco130I CCWWGG 3 cut(s) 89, 426, 573
Eco24I GRGCYC 1 cut(s) 586
Eco32I GATATC 1 cut(s) 754
Eco47I GGWCC 3 cut(s) 339, 712, 1365
Eco57I CTGAAG 2 cut(s) 886, 1390
Eco81I CCTNAGG 1 cut(s) 788
EcoRII CCWGG 1 cut(s) 585
EcoRV GATATC 1 cut(s) 754
EcoT14I CCWWGG 3 cut(s) 89, 426, 573
EcoT22I ATGCAT 4 cut(s) 882, 953, 1306, 1330
EcoT38I GRGCYC 1 cut(s) 586
ErhI CCWWGG 3 cut(s) 89, 426, 573
Esp3I CGTCTC 2 cut(s) 18, 1386
FaeI CATG 4 cut(s) 416, 880, 951, 1090
FaqI GGGAC 1 cut(s) 600
FatI CATG 4 cut(s) 412, 876, 947, 1086
FbaI TGATCA 1 cut(s) 265
Fnu4HI GCNGC 2 cut(s) 60, 706
FokI GGATG 2 cut(s) 275, 584
FriOI GRGCYC 1 cut(s) 586
Fsp4HI GCNGC 2 cut(s) 60, 706
FspBI CTAG 4 cut(s) 75, 198, 702, 1319
GlaI GCGC 1 cut(s) 777
GluI GCNGC 2 cut(s) 60, 706
GsuI CTGGAG 2 cut(s) 600, 1410
HaeIII GGCC 1 cut(s) 162
HapII CCGG 4 cut(s) 496, 710, 850, 1368
HhaI GCGC 1 cut(s) 778
Hin1II CATG 4 cut(s) 416, 880, 951, 1090
Hin6I GCGC 1 cut(s) 776
HinP1I GCGC 1 cut(s) 776
HincII GTYRAC 2 cut(s) 726, 795
HindII GTYRAC 2 cut(s) 726, 795
HinfI GANTC 9 cut(s) 244, 406, 431, 566, 680, 733, 1003, 1039, 1223
HpaI GTTAAC 1 cut(s) 795
HpaII CCGG 4 cut(s) 496, 710, 850, 1368
HphI GGTGA 2 cut(s) 352, 921
Hpy166II GTNNAC 2 cut(s) 726, 795
Hpy188I TCNGA 5 cut(s) 52, 843, 1177, 1297, 1409
Hpy188III TCNNGA 6 cut(s) 17, 198, 521, 787, 1093, 1389
Hpy8I GTNNAC 2 cut(s) 726, 795
HpyAV CCTTC 2 cut(s) 887, 1176
HpyCH4IV ACGT 4 cut(s) 165, 462, 660, 1098
HpyCH4V TGCA 9 cut(s) 540, 821, 880, 924, 951, 1111, 1156, 1304, 1328
HpyF10VI GCNNNNNNNGC 1 cut(s) 818
HpyF3I CTNAG 3 cut(s) 49, 134, 788
HpySE526I ACGT 4 cut(s) 165, 462, 660, 1098
Hsp92II CATG 4 cut(s) 416, 880, 951, 1090
HspAI GCGC 1 cut(s) 776
Ksp22I TGATCA 1 cut(s) 265
KspAI GTTAAC 1 cut(s) 795
Kzo9I GATC 7 cut(s) 265, 397, 401, 438, 852, 1149, 1436
LmnI GCTCC 2 cut(s) 581, 789
Lsp1109I GCAGC 2 cut(s) 46, 692
LweI GCATC 1 cut(s) 46
MaeI CTAG 4 cut(s) 75, 198, 702, 1319
MaeII ACGT 4 cut(s) 165, 462, 660, 1098
MaeIII GTNAC 4 cut(s) 458, 661, 1099, 1242
MalI GATC 7 cut(s) 267, 399, 403, 440, 854, 1151, 1438
MboI GATC 7 cut(s) 265, 397, 401, 438, 852, 1149, 1436
MflI RGATCY 1 cut(s) 1149
MhlI GDGCHC 1 cut(s) 586
MlsI TGGCCA 1 cut(s) 162
MluNI TGGCCA 1 cut(s) 162
MlyI GAGTC 3 cut(s) 238, 440, 674
MnlI CCTC 8 cut(s) 205, 326, 618, 628, 783, 949, 1116, 1189
Mox20I TGGCCA 1 cut(s) 162
Mph1103I ATGCAT 4 cut(s) 882, 953, 1306, 1330
MroXI GAANNNNTTC 2 cut(s) 609, 837
MscI TGGCCA 1 cut(s) 162
MseI TTAA 4 cut(s) 296, 453, 794, 1128
Msp20I TGGCCA 1 cut(s) 162
MspI CCGG 4 cut(s) 496, 710, 850, 1368
MspR9I CCNGG 2 cut(s) 587, 710
Mva1269I GAATGC 1 cut(s) 1304
MvaI CCWGG 1 cut(s) 587
MwoI GCNNNNNNNGC 1 cut(s) 818
NciI CCSGG 1 cut(s) 710
NdeII GATC 7 cut(s) 265, 397, 401, 438, 852, 1149, 1436
NlaIII CATG 4 cut(s) 416, 880, 951, 1090
NlaIV GGNNCC 2 cut(s) 583, 1050
NmuCI GTSAC 1 cut(s) 1242
NsiI ATGCAT 4 cut(s) 882, 953, 1306, 1330
NspI RCATGY 1 cut(s) 951
NspV TTCGAA 1 cut(s) 352
PaeI GCATGC 1 cut(s) 951
PcsI WCGNNNNNNNCGW 1 cut(s) 406
PctI GAATGC 1 cut(s) 1304
PdmI GAANNNNTTC 2 cut(s) 609, 837
PfeI GAWTC 6 cut(s) 406, 566, 733, 1003, 1039, 1223
PinAI ACCGGT 1 cut(s) 1367
PkrI GCNGC 2 cut(s) 61, 707
Ple19I CGATCG 1 cut(s) 404
PleI GAGTC 3 cut(s) 238, 439, 674
PpsI GAGTC 3 cut(s) 238, 439, 674
Psp1406I AACGTT 1 cut(s) 462
Psp6I CCWGG 1 cut(s) 585
PspGI CCWGG 1 cut(s) 585
PspN4I GGNNCC 2 cut(s) 583, 1050
PspPI GGNCC 3 cut(s) 339, 712, 1365
PstI CTGCAG 1 cut(s) 1158
PsuI RGATCY 1 cut(s) 1149
PvuI CGATCG 1 cut(s) 404
RsaI GTAC 1 cut(s) 1415
RsaNI GTAC 1 cut(s) 1414
SaqAI TTAA 4 cut(s) 296, 453, 794, 1128
SatI GCNGC 2 cut(s) 60, 706
Sau3AI GATC 7 cut(s) 265, 397, 401, 438, 852, 1149, 1436
Sau96I GGNCC 3 cut(s) 339, 712, 1365
SchI GAGTC 3 cut(s) 238, 440, 674
ScrFI CCNGG 2 cut(s) 587, 710
SduI GDGCHC 1 cut(s) 586
SfaNI GCATC 1 cut(s) 46
SfcI CTRYAG 1 cut(s) 1154
SfuI TTCGAA 1 cut(s) 352
SgrAI CRCCGGYG 1 cut(s) 495
SinI GGWCC 3 cut(s) 339, 712, 1365
SmlI CTYRAG 3 cut(s) 15, 631, 646
SmoI CTYRAG 3 cut(s) 15, 631, 646
SphI GCATGC 1 cut(s) 951
SspMI CTAG 4 cut(s) 75, 198, 702, 1319
StyD4I CCNGG 2 cut(s) 585, 708
StyI CCWWGG 3 cut(s) 89, 426, 573
TaiI ACGT 4 cut(s) 168, 465, 663, 1101
TatI WGTACW 1 cut(s) 1413
TfiI GAWTC 6 cut(s) 406, 566, 733, 1003, 1039, 1223
Tru1I TTAA 4 cut(s) 296, 453, 794, 1128
Tru9I TTAA 4 cut(s) 296, 453, 794, 1128
TscAI CASTG 2 cut(s) 448, 942
TseFI GTSAC 1 cut(s) 1242
TseI GCWGC 2 cut(s) 59, 705
Tsp45I GTSAC 1 cut(s) 1242
TspRI CASTG 2 cut(s) 448, 942
VpaK11BI GGWCC 3 cut(s) 339, 712, 1365
XapI RAATTY 5 cut(s) 356, 380, 836, 1179, 1200
XbaI TCTAGA 1 cut(s) 197
XceI RCATGY 1 cut(s) 951
XcmI CCANNNNNNNNNTGG 1 cut(s) 256
XmnI GAANNNNTTC 2 cut(s) 609, 837
XspI CTAG 4 cut(s) 75, 198, 702, 1319
Zsp2I ATGCAT 4 cut(s) 882, 953, 1306, 1330
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.