Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0008403

Physical Location & Seq

Genomic Coordinates Reverse (-)

19016618 .. 19023228

Gene Structure 6611 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1232800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1863 bp

ATGATGGAGAAGGCAGACTCTGGGCAGAAGCTGTACACACGAATGAGGCTGTGGGAGTTTCCGGATCAGTATGTTATCGAGCCCACTGATGGCTCTCAGGGATCCTCTTTGGCAATCAGTAGGGTGGATGGCTCTATGCAGCTCATTGAAAAGCTTCCAGATTCCAGCTCCGTTAGGGTTCCTAAGATTCGAACTATTTTTGGTGTGGTTGGGATGCTGAAACTTTTGGCAGGGTCATATTTGATGGTTATAACCGACCGTGAACAGGTCGGTTCATACTTGGGTCATTCCATCTTTAAAGTTTCATCCTTGAAGGTTTTTCCCTGTGACCATTCTTTGAAGAATTCCCCTGCAGAACAGAAAAAGATGGAGACTGAGTTTTCTGGGCTGCTAAATATAGCAGAGAAGACTCCTGGTCTTTATTTCTCATATGAGACCAATTTAACACTGAGCACACAGCGATTGCATGATTTGGGCGATGAATCTAAATTGCTTCCACTTTGGAGACAGGCAGAGCCTAGATTTCTTTGGAACAATTATATGATGGAAGGGATGATAGATAACAAGCTTGATCCATACCTACTTCCTATTGTTCAAGGGAATATCCTTAATTCGTTCTTCCTTTCAGTTTATTGCCGTTTCTCATGTGTGCTTGCGTGCCTGCACACATGCATACATTTCGTACTTGTGTATTCCATTGGCAAAGATATTATTGATGTTACTCTGATTGCTAGGAGATGCACTAGGCGAAATGGTACGCGGATGTGGAGAAGAGGAGCTGATTCTGATGGGTACGTAGCGAACTTTGTCGAAACTGAGCAGATTATGCACTTGAATGGGTTTACTTCATCATTTGTCCAGGTTAGGGGGTCAATTCCTTTGCTTTGGGACCAAATTGTTGACTTAACGTATAAGCCCAAGTTCGAAATTGTGCGACTTGAGGAATCTCCTCGAGTGGCAGAGCGGCATTTTCTGGATTTAAGAAAAAAGTATGGGGCTGTATTAGCTGTTGATCTTGTCAACACGCATGGAGGTGAAGGACGCTTGAGTGAGAAATTTGCAAATGCAATGCAGCATATTGTTAGTGATGATCTGAGATATTGGCACTTTGATTTTCACCATATCTGTGGACACGTCCATTTTGAGCGCCTCTCTATCCTTTATGAGCAAATTGTAGATTTCCTCGACAGAAATGGGTATCTTCTATTGAATGAAAAGGGCGAGAAAATGAAGGAGCAGCTAGGAGTTGTAAGGACCAATTGCATTGATTGCCTAGATCGTACAAATGTTACCCAGAGCATGATAGCCCGAAATATGTTGGAATGCCAACTTAGAAGGCTTGGAATTTTTGCTGCTGAAGAAACTATTAGCTCACATCACAATTTAGATGAATGCTTTAGAGTCTTGTGGGCTAATCATGGGGATGATGTAAGCATTCAGTATTCTGGAACTCCTGCTTTGAAGGGGGATTTTGTAAGATGTGGACAGCGGACAATGCCAGGGATCGCTAAGGATGGAGTCAGTGCCCTTCTACGATATTATTATAATAACTTTTGCGACGGAACAAAACAGGATGCAATTGACCTCCTGCAAGGACATTACATTGTCTCGGTCAGCAGAGATATGACACCGTCGTCACAAAAAGGAGGACTTGAGGCTGTTGCCTCATTCCCGCTGGCGTTGTTTTTCGTTTTGACGGGGTTCTTTTTTGCGACATTGTCATTGAGGCAAGTTAGGTACGATCTACGGCACTTGTTCTTCTCAAGTATATGGGCAGGTCTAAGTATTGCTTTAGCTGCATTCGTGAGGGCCAATGGGCGTATTTTCTGCAACAGACCTCGTCTACACAAGCCTCGGTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0005911 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009611 GO:0009628 GO:0009651 GO:0009653 GO:0009826 GO:0009888 GO:0009932 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019637 GO:0021700 GO:0022622 GO:0030054 GO:0030154 GO:0030258 GO:0030427 GO:0031520 GO:0031984 GO:0032501 GO:0032502 GO:0032989 GO:0034596 GO:0035618 GO:0035619 GO:0035838 GO:0040007 GO:0042175 GO:0042578 GO:0042995 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043812 GO:0044237 GO:0044238 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044459 GO:0044463 GO:0044464 GO:0046486 GO:0046488 GO:0046839 GO:0046856 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048768 GO:0048856 GO:0048869 GO:0050896 GO:0051286 GO:0052744 GO:0052866 GO:0055044 GO:0060560 GO:0071695 GO:0071704 GO:0071840 GO:0071944 GO:0080147 GO:0090404 GO:0090406 GO:0090558 GO:0090627 GO:0098590 GO:0098827 GO:0099402 GO:0120025 GO:0120038 GO:1905392

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko04070 map00562 map01100 map04070

Pfam Domains

Protein Families

Syja_N

Protein Analysis

621

Amino Acids

70.75

Weight (kDa)

8.28

Isoelectric Point (pI)

37.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Syja_N	PF02383	67 - 376	6e-80	SacI homology domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0008403)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51460 AT5G66020
fragaria_vesca	FvH4_1g10490 FvH4_1g10490 FvH4_1g10490
malus_domestica	MD02G1118500.v1.1 MD15G1232800.v1.1
prunus_persica	Prupe.7G181200_v2.0.a1 Prupe.7G181200_v2.0.a1 Prupe.7G181200_v2.0.a1
pyrus_communis	pycom02g09200 pycom15g20720
rosa_chinensis	RchiOBHm_Chr2g0097371
rosa_laevigata	RLG00000016721
rosa_multiflora	Rmu_sc0001060.1_g000009
rosa_roxburghii	Rroxscaffold_2G00144730
rosa_rugosa	Rorug02G0066100 Rorug02G0066200
rosa_samantha	Rh2AG112900 Rh2BG115700 Rh2CG117700 Rh2DG116900
rosa_wichuraiana	Rw2G008840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	251, 1545
AasI	GACNNNNNNGTC	1 cut(s)	1633
Acc36I	ACCTGC	1 cut(s)	1766
AccBSI	CCGCTC	1 cut(s)	964
AccI	GTMKAC	1 cut(s)	1843
AccII	CGCG	1 cut(s)	760
AccIII	TCCGGA	1 cut(s)	61
AciI	CCGC	4 cut(s)	760, 964, 1489, 1673
AclWI	GGATC	5 cut(s)	72, 96, 109, 566, 1511
AcsI	RAATTY	3 cut(s)	343, 1055, 1344
AcuI	CTGAAG	1 cut(s)	1377
AfaI	GTAC	6 cut(s)	35, 684, 757, 794, 1282, 1739
AfiI	CCNNNNNNNGG	3 cut(s)	89, 265, 865
AflIII	ACRYGT	1 cut(s)	1132
AgsI	TTSAA	7 cut(s)	149, 313, 340, 596, 835, 1210, 1462
AhdI	GACNNNNNGTC	1 cut(s)	414
AjiI	CACGTC	1 cut(s)	1135
AjnI	CCWGG	3 cut(s)	412, 858, 1498
Alw21I	GWGCWC	1 cut(s)	455
Alw26I	GTCTC	4 cut(s)	365, 428, 499, 1612
AlwI	GGATC	5 cut(s)	72, 96, 109, 566, 1511
AlwNI	CAGNNNCTG	2 cut(s)	20, 31
Ama87I	CYCGRG	1 cut(s)	951
Aor13HI	TCCGGA	1 cut(s)	61
AoxI	GGCC	1 cut(s)	1809
ApeKI	GCWGC	6 cut(s)	139, 388, 1072, 1237, 1352, 1796
ApoI	RAATTY	3 cut(s)	343, 1055, 1344
Asp700I	GAANNNNTTC	1 cut(s)	153
AspLEI	GCGC	1 cut(s)	1149
AspS9I	GGNCC	3 cut(s)	889, 1254, 1809
AsuHPI	GGTGA	2 cut(s)	1046, 1109
AsuII	TTCGAA	2 cut(s)	190, 924
AvaI	CYCGRG	1 cut(s)	951
AvaII	GGWCC	2 cut(s)	889, 1254
BaeGI	GKGCMC	1 cut(s)	1528
BamHI	GGATCC	1 cut(s)	101
BanII	GRGCYC	1 cut(s)	84
BbsI	GAAGAC	1 cut(s)	413
Bbv12I	GWGCWC	1 cut(s)	455
BbvI	GCAGC	6 cut(s)	151, 375, 1084, 1249, 1339, 1783
BccI	CCATC	8 cut(s)	83, 122, 238, 299, 361, 538, 782, 1508
BceAI	ACGGC	2 cut(s)	621, 1763
BcgI	CGANNNNNNTGC	2 cut(s)	661, 695
BciT130I	CCWGG	3 cut(s)	414, 860, 1500
BcoDI	GTCTC	4 cut(s)	365, 428, 499, 1612
BfaI	CTAG	5 cut(s)	519, 732, 744, 1241, 1274
BfmI	CTRYAG	1 cut(s)	351
BfoI	RGCGCY	1 cut(s)	1150
BfuAI	ACCTGC	1 cut(s)	1766
BisI	GCNGC	7 cut(s)	140, 389, 965, 1073, 1238, 1353, 1797
BlsI	GCNGC	7 cut(s)	141, 390, 966, 1074, 1239, 1354, 1798
Bme1390I	CCNGG	3 cut(s)	414, 860, 1500
Bme18I	GGWCC	2 cut(s)	889, 1254
BmeRI	GACNNNNNGTC	1 cut(s)	414
BmeT110I	CYCGRG	1 cut(s)	951
BmgBI	CACGTC	1 cut(s)	1135
BmgT120I	GGNCC	3 cut(s)	889, 1254, 1809
BmiI	GGNNCC	3 cut(s)	103, 180, 890
BmrFI	CCNGG	3 cut(s)	414, 860, 1500
BmsI	GCATC	3 cut(s)	204, 728, 1564
BpiI	GAAGAC	1 cut(s)	413
BplI	GAGNNNNNCTC	2 cut(s)	1136, 1168
Bpu10I	CCTNAGC	1 cut(s)	1509
Bpu14I	TTCGAA	2 cut(s)	190, 924
BpuEI	CTTGAG	4 cut(s)	959, 1066, 1673, 1747
BsaAI	YACGTR	1 cut(s)	796
BsaI	GGTCTC	1 cut(s)	428
BsaJI	CCNNGG	2 cut(s)	1499, 1853
BsaWI	WCCGGW	1 cut(s)	61
BsaXI	ACNNNNNCTCC	2 cut(s)	362, 392
Bsc4I	CCNNNNNNNGG	3 cut(s)	89, 265, 865
Bse3DI	GCAATG	1 cut(s)	1074
BseAI	TCCGGA	1 cut(s)	61
BseBI	CCWGG	3 cut(s)	414, 860, 1500
BseDI	CCNNGG	2 cut(s)	1499, 1853
BseGI	GGATG	8 cut(s)	133, 219, 305, 558, 768, 1429, 1519, 1579
BseLI	CCNNNNNNNGG	3 cut(s)	89, 265, 865
BseMI	GCAATG	1 cut(s)	1074
BseMII	CTCAG	5 cut(s)	110, 366, 440, 807, 1085
BseRI	GAGGAG	2 cut(s)	789, 939
BseSI	GKGCMC	1 cut(s)	1528
BseXI	GCAGC	6 cut(s)	151, 375, 1084, 1249, 1339, 1783
BsgI	GTGCAG	1 cut(s)	647
Bsh1236I	CGCG	1 cut(s)	760
Bsh1285I	CGRYCG	1 cut(s)	259
BshFI	GGCC	1 cut(s)	1811
BsiEI	CGRYCG	1 cut(s)	259
BsiHKAI	GWGCWC	1 cut(s)	455
BsiHKCI	CYCGRG	1 cut(s)	951
BsiSI	CCGG	1 cut(s)	62
BslFI	GGGAC	1 cut(s)	902
BslI	CCNNNNNNNGG	3 cut(s)	89, 265, 865
BsmAI	GTCTC	4 cut(s)	365, 428, 499, 1612
BsmFI	GGGAC	1 cut(s)	902
BsmI	GAATGC	4 cut(s)	1328, 1397, 1434, 1799
BsnI	GGCC	1 cut(s)	1811
Bso31I	GGTCTC	1 cut(s)	428
BsoBI	CYCGRG	1 cut(s)	951
Bsp119I	TTCGAA	2 cut(s)	190, 924
Bsp1286I	GDGCHC	3 cut(s)	84, 455, 1528
Bsp13I	TCCGGA	1 cut(s)	61
Bsp1407I	TGTACA	1 cut(s)	33
Bsp143I	GATC	8 cut(s)	64, 101, 571, 1012, 1090, 1276, 1503, 1741
BspACI	CCGC	4 cut(s)	760, 964, 1489, 1673
BspANI	GGCC	1 cut(s)	1811
BspCNI	CTCAG	5 cut(s)	109, 367, 441, 808, 1086
BspEI	TCCGGA	1 cut(s)	61
BspFNI	CGCG	1 cut(s)	760
BspLI	GGNNCC	3 cut(s)	103, 180, 890
BspMAI	CTGCAG	1 cut(s)	355
BspMI	ACCTGC	1 cut(s)	1766
BspPI	GGATC	5 cut(s)	72, 96, 109, 566, 1511
BspT104I	TTCGAA	2 cut(s)	190, 924
BspTNI	GGTCTC	1 cut(s)	428
BsrBI	CCGCTC	1 cut(s)	964
BsrDI	GCAATG	1 cut(s)	1074
BsrGI	TGTACA	1 cut(s)	33
BssECI	CCNNGG	2 cut(s)	1499, 1853
BssMI	GATC	8 cut(s)	64, 101, 571, 1012, 1090, 1276, 1503, 1741
Bst2UI	CCWGG	3 cut(s)	414, 860, 1500
Bst4CI	ACNGT	2 cut(s)	260, 1632
Bst6I	CTCTTC	1 cut(s)	766
BstAPI	GCANNNNNTGC	2 cut(s)	826, 1269
BstAUI	TGTACA	1 cut(s)	33
BstBAI	YACGTR	1 cut(s)	796
BstBI	TTCGAA	2 cut(s)	190, 924
BstC8I	GCNNGC	4 cut(s)	654, 658, 662, 1677
BstDEI	CTNAG	9 cut(s)	96, 183, 375, 449, 816, 1094, 1331, 1509, 1781
BstF5I	GGATG	8 cut(s)	133, 219, 305, 558, 768, 1429, 1519, 1579
BstFNI	CGCG	1 cut(s)	760
BstH2I	RGCGCY	1 cut(s)	1150
BstHHI	GCGC	1 cut(s)	1149
BstKTI	GATC	8 cut(s)	67, 104, 574, 1015, 1093, 1279, 1506, 1744
BstMAI	GTCTC	4 cut(s)	365, 428, 499, 1612
BstMBI	GATC	8 cut(s)	64, 101, 571, 1012, 1090, 1276, 1503, 1741
BstMCI	CGRYCG	1 cut(s)	259
BstMWI	GCNNNNNNNGC	5 cut(s)	826, 1004, 1269, 1495, 1796
BstNI	CCWGG	3 cut(s)	414, 860, 1500
BstNSI	RCATGY	1 cut(s)	672
BstSCI	CCNGG	3 cut(s)	412, 858, 1498
BstSFI	CTRYAG	1 cut(s)	351
BstSLI	GKGCMC	1 cut(s)	1528
BstSNI	TACGTA	1 cut(s)	796
BstUI	CGCG	1 cut(s)	760
BstV1I	GCAGC	6 cut(s)	151, 375, 1084, 1249, 1339, 1783
BstV2I	GAAGAC	1 cut(s)	413
BstX2I	RGATCY	1 cut(s)	101
BstXI	CCANNNNNNTGG	1 cut(s)	1127
BstYI	RGATCY	1 cut(s)	101
BsuRI	GGCC	1 cut(s)	1811
BtgZI	GCGATG	1 cut(s)	492
BtrI	CACGTC	1 cut(s)	1135
BtsCI	GGATG	8 cut(s)	133, 219, 305, 558, 768, 1429, 1519, 1579
BtsIMutI	CAGTG	3 cut(s)	84, 446, 1528
BveI	ACCTGC	1 cut(s)	1766
Cac8I	GCNNGC	4 cut(s)	654, 658, 662, 1677
CaiI	CAGNNNCTG	2 cut(s)	20, 31
CfoI	GCGC	1 cut(s)	1149
Cfr13I	GGNCC	3 cut(s)	889, 1254, 1809
CseI	GACGC	1 cut(s)	1050
Csp6I	GTAC	6 cut(s)	34, 683, 756, 793, 1281, 1738
CviAII	CATG	6 cut(s)	467, 645, 669, 1028, 1300, 1418
CviQI	GTAC	6 cut(s)	34, 683, 756, 793, 1281, 1738
DdeI	CTNAG	9 cut(s)	96, 183, 375, 449, 816, 1094, 1331, 1509, 1781
DpnI	GATC	8 cut(s)	66, 103, 573, 1014, 1092, 1278, 1505, 1743
DpnII	GATC	8 cut(s)	64, 101, 571, 1012, 1090, 1276, 1503, 1741
DraI	TTTAAA	1 cut(s)	298
DrdI	GACNNNNNNGTC	1 cut(s)	1633
DriI	GACNNNNNGTC	1 cut(s)	414
DseDI	GACNNNNNNGTC	1 cut(s)	1633
Eam1104I	CTCTTC	1 cut(s)	766
Eam1105I	GACNNNNNGTC	1 cut(s)	414
EarI	CTCTTC	1 cut(s)	766
Eco105I	TACGTA	1 cut(s)	796
Eco24I	GRGCYC	1 cut(s)	84
Eco31I	GGTCTC	1 cut(s)	428
Eco47I	GGWCC	2 cut(s)	889, 1254
Eco57I	CTGAAG	1 cut(s)	1377
Eco88I	CYCGRG	1 cut(s)	951
EcoRI	GAATTC	1 cut(s)	343
EcoRII	CCWGG	3 cut(s)	412, 858, 1498
EcoT22I	ATGCAT	1 cut(s)	674
EcoT38I	GRGCYC	1 cut(s)	84
FaeI	CATG	6 cut(s)	470, 648, 672, 1031, 1303, 1421
FalI	AAGNNNNNCTT	4 cut(s)	1635, 1667, 1774, 1806
FaqI	GGGAC	1 cut(s)	902
FatI	CATG	6 cut(s)	466, 644, 668, 1027, 1299, 1417
FauI	CCCGC	1 cut(s)	1680
FauNDI	CATATG	1 cut(s)	430
FblI	GTMKAC	1 cut(s)	1843
Fnu4HI	GCNGC	7 cut(s)	140, 389, 965, 1073, 1238, 1353, 1797
FokI	GGATG	8 cut(s)	140, 226, 292, 565, 775, 1436, 1526, 1586
FriOI	GRGCYC	1 cut(s)	84
Fsp4HI	GCNGC	7 cut(s)	140, 389, 965, 1073, 1238, 1353, 1797
FspBI	CTAG	5 cut(s)	519, 732, 744, 1241, 1274
GlaI	GCGC	1 cut(s)	1148
GluI	GCNGC	7 cut(s)	140, 389, 965, 1073, 1238, 1353, 1797
HaeII	RGCGCY	1 cut(s)	1150
HaeIII	GGCC	1 cut(s)	1811
HapII	CCGG	1 cut(s)	62
HgaI	GACGC	1 cut(s)	1050
HhaI	GCGC	1 cut(s)	1149
Hin1II	CATG	6 cut(s)	470, 648, 672, 1031, 1303, 1421
Hin6I	GCGC	1 cut(s)	1147
HinP1I	GCGC	1 cut(s)	1147
HincII	GTYRAC	2 cut(s)	901, 1021
HindII	GTYRAC	2 cut(s)	901, 1021
HindIII	AAGCTT	2 cut(s)	152, 566
HinfI	GANTC	9 cut(s)	17, 161, 187, 409, 482, 782, 944, 1401, 1518
HpaII	CCGG	1 cut(s)	62
HphI	GGTGA	2 cut(s)	1046, 1109
Hpy166II	GTNNAC	8 cut(s)	36, 263, 843, 901, 1021, 1130, 1484, 1844
Hpy188I	TCNGA	3 cut(s)	726, 787, 1095
Hpy188III	TCNNGA	6 cut(s)	62, 158, 974, 1446, 1804, 1860
Hpy8I	GTNNAC	8 cut(s)	36, 263, 843, 901, 1021, 1130, 1484, 1844
Hpy99I	CGWCG	2 cut(s)	1562, 1636
HpyAV	CCTTC	8 cut(s)	4, 307, 542, 1031, 1225, 1329, 1456, 1538
HpyCH4III	ACNGT	2 cut(s)	260, 1632
HpyCH4IV	ACGT	3 cut(s)	795, 908, 1134
HpyF10VI	GCNNNNNNNGC	5 cut(s)	826, 1004, 1269, 1495, 1796
HpyF3I	CTNAG	9 cut(s)	96, 183, 375, 449, 816, 1094, 1331, 1509, 1781
HpySE526I	ACGT	3 cut(s)	795, 908, 1134
Hsp92II	CATG	6 cut(s)	470, 648, 672, 1031, 1303, 1421
HspAI	GCGC	1 cut(s)	1147
Kpn2I	TCCGGA	1 cut(s)	61
Kzo9I	GATC	8 cut(s)	64, 101, 571, 1012, 1090, 1276, 1503, 1741
LmnI	GCTCC	3 cut(s)	173, 776, 1234
Lsp1109I	GCAGC	6 cut(s)	151, 375, 1084, 1249, 1339, 1783
LweI	GCATC	3 cut(s)	204, 728, 1564
MaeI	CTAG	5 cut(s)	519, 732, 744, 1241, 1274
MaeII	ACGT	3 cut(s)	795, 908, 1134
MaeIII	GTNAC	4 cut(s)	326, 718, 1288, 1635
MalI	GATC	8 cut(s)	66, 103, 573, 1014, 1092, 1278, 1505, 1743
MbiI	CCGCTC	1 cut(s)	964
MboI	GATC	8 cut(s)	64, 101, 571, 1012, 1090, 1276, 1503, 1741
MboII	GAAGA	7 cut(s)	352, 418, 610, 783, 1193, 1370, 1750
MfeI	CAATTG	2 cut(s)	1258, 1578
MflI	RGATCY	1 cut(s)	101
MhlI	GDGCHC	3 cut(s)	84, 455, 1528
MlyI	GAGTC	4 cut(s)	11, 403, 1410, 1527
MmeI	TCCRAC	1 cut(s)	1299
Mph1103I	ATGCAT	1 cut(s)	674
MroI	TCCGGA	1 cut(s)	61
MroXI	GAANNNNTTC	1 cut(s)	153
MseI	TTAA	5 cut(s)	297, 443, 609, 905, 980
MslI	CAYNNNNRTG	5 cut(s)	41, 834, 1032, 1125, 1422
MspA1I	CMGCKG	2 cut(s)	1489, 1675
MspI	CCGG	1 cut(s)	62
MspR9I	CCNGG	3 cut(s)	414, 860, 1500
MunI	CAATTG	2 cut(s)	1258, 1578
Mva1269I	GAATGC	4 cut(s)	1328, 1397, 1434, 1799
MvaI	CCWGG	3 cut(s)	414, 860, 1500
MvnI	CGCG	1 cut(s)	760
MwoI	GCNNNNNNNGC	5 cut(s)	826, 1004, 1269, 1495, 1796
NdeI	CATATG	1 cut(s)	430
NdeII	GATC	8 cut(s)	64, 101, 571, 1012, 1090, 1276, 1503, 1741
NlaIII	CATG	6 cut(s)	470, 648, 672, 1031, 1303, 1421
NlaIV	GGNNCC	3 cut(s)	103, 180, 890
NmuCI	GTSAC	2 cut(s)	326, 1635
NsiI	ATGCAT	1 cut(s)	674
NspI	RCATGY	1 cut(s)	672
NspV	TTCGAA	2 cut(s)	190, 924
PaeR7I	CTCGAG	1 cut(s)	951
PctI	GAATGC	4 cut(s)	1328, 1397, 1434, 1799
PdmI	GAANNNNTTC	1 cut(s)	153
PfeI	GAWTC	5 cut(s)	161, 187, 482, 782, 944
PflFI	GACNNNGTC	3 cut(s)	1630, 1717, 1839
PkrI	GCNGC	7 cut(s)	141, 390, 966, 1074, 1239, 1354, 1798
PleI	GAGTC	4 cut(s)	11, 403, 1409, 1526
PpsI	GAGTC	4 cut(s)	11, 403, 1409, 1526
Ppu21I	YACGTR	1 cut(s)	796
PsiI	TTATAA	2 cut(s)	251, 1545
Psp6I	CCWGG	3 cut(s)	412, 858, 1498
PspGI	CCWGG	3 cut(s)	412, 858, 1498
PspN4I	GGNNCC	3 cut(s)	103, 180, 890
PspPI	GGNCC	3 cut(s)	889, 1254, 1809
PspXI	VCTCGAGB	1 cut(s)	951
PstI	CTGCAG	1 cut(s)	355
PstNI	CAGNNNCTG	2 cut(s)	20, 31
PsuI	RGATCY	1 cut(s)	101
PsyI	GACNNNGTC	3 cut(s)	1630, 1717, 1839
RsaI	GTAC	6 cut(s)	35, 684, 757, 794, 1282, 1739
RsaNI	GTAC	6 cut(s)	34, 683, 756, 793, 1281, 1738
RseI	CAYNNNNRTG	5 cut(s)	41, 834, 1032, 1125, 1422
SaqAI	TTAA	5 cut(s)	297, 443, 609, 905, 980
SatI	GCNGC	7 cut(s)	140, 389, 965, 1073, 1238, 1353, 1797
Sau3AI	GATC	8 cut(s)	64, 101, 571, 1012, 1090, 1276, 1503, 1741
Sau96I	GGNCC	3 cut(s)	889, 1254, 1809
SchI	GAGTC	4 cut(s)	11, 403, 1410, 1527
ScrFI	CCNGG	3 cut(s)	414, 860, 1500
SduI	GDGCHC	3 cut(s)	84, 455, 1528
SfaNI	GCATC	3 cut(s)	204, 728, 1564
SfcI	CTRYAG	1 cut(s)	351
Sfr274I	CTCGAG	1 cut(s)	951
SfuI	TTCGAA	2 cut(s)	190, 924
SinI	GGWCC	2 cut(s)	889, 1254
SlaI	CTCGAG	1 cut(s)	951
SmiMI	CAYNNNNRTG	5 cut(s)	41, 834, 1032, 1125, 1422
SmlI	CTYRAG	5 cut(s)	938, 951, 1045, 1652, 1762
SmoI	CTYRAG	5 cut(s)	938, 951, 1045, 1652, 1762
SnaBI	TACGTA	1 cut(s)	796
SsiI	CCGC	4 cut(s)	760, 964, 1489, 1673
SspMI	CTAG	5 cut(s)	519, 732, 744, 1241, 1274
StyD4I	CCNGG	3 cut(s)	412, 858, 1498
TaaI	ACNGT	2 cut(s)	260, 1632
TaiI	ACGT	3 cut(s)	798, 911, 1137
TaqI	TCGA	6 cut(s)	78, 190, 810, 924, 952, 1185
TaqII	GACCGA	2 cut(s)	1600, 1845
TatI	WGTACW	1 cut(s)	33
TauI	GCSGC	1 cut(s)	967
TfiI	GAWTC	5 cut(s)	161, 187, 482, 782, 944
Tru1I	TTAA	5 cut(s)	297, 443, 609, 905, 980
Tru9I	TTAA	5 cut(s)	297, 443, 609, 905, 980
TscAI	CASTG	3 cut(s)	91, 453, 1528
TseFI	GTSAC	2 cut(s)	326, 1635
TseI	GCWGC	6 cut(s)	139, 388, 1072, 1237, 1352, 1796
Tsp45I	GTSAC	2 cut(s)	326, 1635
TspDTI	ATGAA	7 cut(s)	264, 294, 495, 837, 1227, 1244, 1404
TspGWI	ACGGA	2 cut(s)	160, 1575
TspRI	CASTG	3 cut(s)	91, 453, 1528
Tth111I	GACNNNGTC	3 cut(s)	1630, 1717, 1839
VpaK11BI	GGWCC	2 cut(s)	889, 1254
XapI	RAATTY	3 cut(s)	343, 1055, 1344
XceI	RCATGY	1 cut(s)	672
XhoI	CTCGAG	1 cut(s)	951
XmiI	GTMKAC	1 cut(s)	1843
XmnI	GAANNNNTTC	1 cut(s)	153
XspI	CTAG	5 cut(s)	519, 732, 744, 1241, 1274
Zsp2I	ATGCAT	1 cut(s)	674

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.