MD15G1232900.v1.1

Ubiquitin domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0007479
Physical Location & Seq
Reverse (-)
19045446 .. 19050315
4870 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1232900.v1.1.491

Sequence Viewer

Length: 1677 bp
ATGGGAGGAGGAAGTGAGGGTTCTGTGGACGACGCTGCCCAATCCGACGGCGGACATGGAGTCAAGGTCAACGTCAACGTCAAGTGCTCTAATGGCTCCAAGTTCACCGTTCAGATTGGCCTCGAATCCACCGTTGGATCGTTCAAGGAAGTCCTCTCGCCGAAATGCGACATTCCGGCCAATCAGCAGCGGCTGATTTACAAGGGCCGGATCTTGAAGGACGATCAAACGCTCCAAAGCTACGGTTTGGAGGCAGATCACACTCTTCACTTGGTTCGTGCTTCAGCAAACACGGGTGTTGCAACCAATGCTGGAGCTGCAAATTCTACCCAAGGAAGGGGTGTTAGATCTAGTGAAGGCAGTGGGACACTAGGAGGGTCTGGTTTTGGAACCTTGCCATCCCTTGGACTTGGACTTAATGGCAATGGAATGGGTGGTGCTGGTGGTCTATTCGGAGCTGGGTTTCCTGAATTTGACCAAATGCAGCAACAAATGACTCAGAACCCTAACGTGATGAGAGACATAATTAACATGCCAGCCATTCAAAATATTATGAATAACCCAGACATAATGCGGAACTTGATTATGAACAACCCTCAAATGCGTGAAGTTATTGATCGAAATCCTGAGCTAGCACACGTGCTTAATGATCCTAGCACCCTCCGTCAGACACTTGAAGCAGCAAGAAACCCTGAGCTTATGCGTGAGATGATGCGCAACACTGACAGAGCCATGAGCAACATTGAAGCCACTCCTGAGGGATTTAATATGCTCAGACGCATGTATGAGAACGTACAAGAGCCGTTTATGAATGCAACAACTATGGCTGGAGATGCTGGAAGTGACGGTTCAAACCCATTTGCAGCTCTTTTGGGGGCCGAAGGTGGCAACCAAACCAGAGCTCAGTCCACTAACCAATCAACAGTTAGTTCTGATACAGCAACTGGTTCTCCTGCTCCAAATACTAACCCACTTCCTAACCCATGGTCCTCTGCTGGCACTGGTGTTGGTCAAACTAACACCGCATGGTCGAATCCTTTCGGGGATGCTACGCTACAGACACCGTCTGGCACAGCTAGAAGTAGCCTAGCTGGAATTAGCTACCCAGAGTTAGAAGGAGCATTTGGTGCCATGCCGCAGGATAGCAATTTACTGAATCAATTGATGCAAAATCCAGCTGTTTCTCAAATTATGCAAAGCCTCCTCTCTAATCCTGAGTATATGAACGAGATTCTAGGTTCCAACCCCCAGTTACGCAGCATGCTTGACTCCAATTCTTATTTAAGAGAGATGATGCAAAACCCAGAATTTCTTCGTCAGTTGGCTTCTCCTGAGACTATGCAGATGCTCTTGACTTTGCAGCAATCACTTCTGTCGCAACTTGGTCGGCAACAGCAACAGTCAACCCAGGAACCAGGTCAGACTGGTGCAAACACAGGAATATTAAATAACATGGGGTTAGACGCGCTGATGAATATGTTTGGCGGGCTTGGCACTGGCAACCTGGCTGTTCCCAATCGGCCTGATGTGCCACCTGAAGAACTTTATGCTGCACAGCTTTCACAACTTCAGGAGATGGGTTTCTTTGATCGACAAGAGAACATACGGGCTCTGATGGCCACTGCAGGAAATGTACATGCAGCAGTGGAGCGGCTTTTGGGGAATTTGGGACGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
UBA ubiquitin

Protein Analysis

559

Amino Acids

59.46

Weight (kDa)

4.8

Isoelectric Point (pI)

45.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rad60-SLD PF11976 24 - 92 9.8e-11 Ubiquitin-2 like Rad60 SUMO-like
ubiquitin PF00240 25 - 93 5.7e-22 Ubiquitin family
UBQLN1 PF23195 164 - 288 3e-49 Ubiquilin-1-like domain
UBQLN1 PF23195 380 - 461 1.8e-10 Ubiquilin-1-like domain
UBA PF00627 516 - 552 8.5e-09 UBA/TS-N domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 716
AccB1I GGYRCC 1 cut(s) 1127
AccB7I CCANNNNNTGG 1 cut(s) 404
AccBSI CCGCTC 1 cut(s) 1651
AccII CGCG 1 cut(s) 1466
AciI CCGC 7 cut(s) 51, 190, 574, 1023, 1136, 1485, 1651
AclWI GGATC 3 cut(s) 145, 218, 644
AcoI YGGCCR 2 cut(s) 177, 1617
AcsI RAATTY 4 cut(s) 322, 470, 1307, 1663
AcuI CTGAAG 3 cut(s) 267, 1553, 1557
AcvI CACGTG 1 cut(s) 640
AfaI GTAC 2 cut(s) 795, 1635
AfiI CCNNNNNNNGG 3 cut(s) 336, 337, 404
AflIII ACRYGT 1 cut(s) 637
AgsI TTSAA 6 cut(s) 145, 217, 545, 677, 746, 852
AhdI GACNNNNNGTC 1 cut(s) 59
AjnI CCWGG 3 cut(s) 1407, 1414, 1503
AjuI GAANNNNNNNTTGG 4 cut(s) 117, 149, 1107, 1139
Alw21I GWGCWC 2 cut(s) 89, 904
Alw26I GTCTC 2 cut(s) 513, 1328
AlwI GGATC 3 cut(s) 145, 218, 644
AlwNI CAGNNNCTG 2 cut(s) 193, 944
AoxI GGCC 6 cut(s) 118, 177, 205, 876, 1520, 1617
ApoI RAATTY 4 cut(s) 322, 470, 1307, 1663
Asp700I GAANNNNTTC 2 cut(s) 1037, 1311
AspLEI GCGC 2 cut(s) 717, 1468
AspS9I GGNCC 3 cut(s) 205, 876, 987
AsuHPI GGTGA 1 cut(s) 97
AsuNHI GCTAGC 1 cut(s) 631
AvaII GGWCC 1 cut(s) 987
AxyI CCTNAGG 1 cut(s) 756
BalI TGGCCA 1 cut(s) 1619
BanI GGYRCC 1 cut(s) 1127
BanII GRGCYC 2 cut(s) 904, 1612
BbrPI CACGTG 1 cut(s) 640
Bbv12I GWGCWC 2 cut(s) 89, 904
BccI CCATC 3 cut(s) 406, 1570, 1609
BceAI ACGGC 2 cut(s) 64, 787
BcgI CGANNNNNNTGC 2 cut(s) 1367, 1401
BciT130I CCWGG 3 cut(s) 1409, 1416, 1505
BcoDI GTCTC 2 cut(s) 513, 1328
BfaI CTAG 7 cut(s) 351, 371, 632, 654, 1077, 1088, 1235
BfmI CTRYAG 2 cut(s) 1055, 1623
BglII AGATCT 1 cut(s) 347
Bme1390I CCNGG 3 cut(s) 1409, 1416, 1505
Bme18I GGWCC 1 cut(s) 987
BmeRI GACNNNNNGTC 1 cut(s) 59
BmgT120I GGNCC 3 cut(s) 205, 876, 987
BmiI GGNNCC 6 cut(s) 97, 391, 877, 1129, 1240, 1413
BmrFI CCNGG 3 cut(s) 1409, 1416, 1505
BmrI ACTGGG 1 cut(s) 1243
BmsI GCATC 6 cut(s) 702, 823, 1036, 1155, 1284, 1335
BmtI GCTAGC 1 cut(s) 635
BmuI ACTGGG 1 cut(s) 1243
BpmI CTGGAG 2 cut(s) 333, 849
Bpu10I CCTNAGC 2 cut(s) 627, 693
BsaAI YACGTR 1 cut(s) 640
BsaBI GATNNNNATC 1 cut(s) 621
BsaJI CCNNGG 4 cut(s) 331, 403, 983, 1407
BsaXI ACNNNNNCTCC 4 cut(s) 51, 81, 934, 964
Bsc4I CCNNNNNNNGG 3 cut(s) 336, 337, 404
Bse1I ACTGG 5 cut(s) 949, 1006, 1249, 1429, 1501
Bse21I CCTNAGG 1 cut(s) 756
Bse3DI GCAATG 1 cut(s) 430
Bse8I GATNNNNATC 1 cut(s) 621
BseBI CCWGG 3 cut(s) 1409, 1416, 1505
BseDI CCNNGG 4 cut(s) 331, 403, 983, 1407
BseGI GGATG 2 cut(s) 398, 1051
BseJI GATNNNNATC 1 cut(s) 621
BseLI CCNNNNNNNGG 3 cut(s) 336, 337, 404
BseMI GCAATG 1 cut(s) 430
BseMII CTCAG 8 cut(s) 512, 618, 684, 747, 787, 917, 1206, 1323
BseNI ACTGG 5 cut(s) 949, 1006, 1249, 1429, 1501
BseRI GAGGAG 2 cut(s) 21, 1193
BseYI CCCAGC 1 cut(s) 458
BsgI GTGCAG 1 cut(s) 1536
Bsh1236I CGCG 1 cut(s) 1466
BshFI GGCC 6 cut(s) 120, 179, 207, 878, 1522, 1619
BshNI GGYRCC 1 cut(s) 1127
BsiHKAI GWGCWC 2 cut(s) 89, 904
BsiSI CCGG 2 cut(s) 176, 208
BslFI GGGAC 1 cut(s) 379
BslI CCNNNNNNNGG 3 cut(s) 336, 337, 404
BsmAI GTCTC 2 cut(s) 513, 1328
BsmFI GGGAC 1 cut(s) 379
BsmI GAATGC 1 cut(s) 817
BsnI GGCC 6 cut(s) 120, 179, 207, 878, 1522, 1619
Bsp1286I GDGCHC 3 cut(s) 89, 904, 1612
Bsp1407I TGTACA 1 cut(s) 1633
Bsp143I GATC 8 cut(s) 137, 210, 223, 256, 347, 616, 649, 1588
Bsp19I CCATGG 1 cut(s) 983
BspACI CCGC 7 cut(s) 51, 190, 574, 1023, 1136, 1485, 1651
BspANI GGCC 6 cut(s) 120, 179, 207, 878, 1522, 1619
BspCNI CTCAG 8 cut(s) 511, 619, 685, 748, 786, 916, 1207, 1324
BspFNI CGCG 1 cut(s) 1466
BspLI GGNNCC 6 cut(s) 97, 391, 877, 1129, 1240, 1413
BspMAI CTGCAG 1 cut(s) 1627
BspOI GCTAGC 1 cut(s) 635
BspPI GGATC 3 cut(s) 145, 218, 644
BspT107I GGYRCC 1 cut(s) 1127
BsrBI CCGCTC 1 cut(s) 1651
BsrDI GCAATG 1 cut(s) 430
BsrGI TGTACA 1 cut(s) 1633
BsrI ACTGG 5 cut(s) 949, 1006, 1249, 1429, 1501
BssECI CCNNGG 4 cut(s) 331, 403, 983, 1407
BssMI GATC 8 cut(s) 137, 210, 223, 256, 347, 616, 649, 1588
BssT1I CCWWGG 3 cut(s) 331, 403, 983
Bst2UI CCWGG 3 cut(s) 1409, 1416, 1505
Bst4CI ACNGT 7 cut(s) 109, 133, 245, 848, 925, 1065, 1401
Bst6I CTCTTC 1 cut(s) 270
BstAPI GCANNNNNTGC 2 cut(s) 308, 1127
BstAUI TGTACA 1 cut(s) 1633
BstBAI YACGTR 1 cut(s) 640
BstC8I GCNNGC 5 cut(s) 537, 633, 997, 1262, 1487
BstDEI CTNAG 8 cut(s) 498, 627, 693, 756, 773, 903, 1215, 1332
BstDSI CCRYGG 1 cut(s) 983
BstF5I GGATG 2 cut(s) 398, 1051
BstFNI CGCG 1 cut(s) 1466
BstHHI GCGC 2 cut(s) 717, 1468
BstKTI GATC 8 cut(s) 140, 213, 226, 259, 350, 619, 652, 1591
BstMAI GTCTC 2 cut(s) 513, 1328
BstMBI GATC 8 cut(s) 137, 210, 223, 256, 347, 616, 649, 1588
BstMWI GCNNNNNNNGC 8 cut(s) 93, 308, 317, 833, 1127, 1491, 1528, 1616
BstNI CCWGG 3 cut(s) 1409, 1416, 1505
BstNSI RCATGY 4 cut(s) 535, 784, 1264, 1640
BstSCI CCNGG 3 cut(s) 1407, 1414, 1503
BstSFI CTRYAG 2 cut(s) 1055, 1623
BstUI CGCG 1 cut(s) 1466
BstX2I RGATCY 2 cut(s) 210, 347
BstYI RGATCY 2 cut(s) 210, 347
Bsu36I CCTNAGG 1 cut(s) 756
BsuRI GGCC 6 cut(s) 120, 179, 207, 878, 1522, 1619
BtgI CCRYGG 1 cut(s) 983
BtsCI GGATG 2 cut(s) 398, 1051
BtsI GCAGTG 3 cut(s) 367, 1620, 1650
BtsIMutI CAGTG 6 cut(s) 367, 720, 999, 1494, 1620, 1650
Cac8I GCNNGC 5 cut(s) 537, 633, 997, 1262, 1487
CaiI CAGNNNCTG 2 cut(s) 193, 944
CfoI GCGC 2 cut(s) 717, 1468
Cfr13I GGNCC 3 cut(s) 205, 876, 987
CseI GACGC 3 cut(s) 41, 786, 1472
CsiI ACCWGGT 1 cut(s) 1414
Csp6I GTAC 2 cut(s) 794, 1634
CviQI GTAC 2 cut(s) 794, 1634
DdeI CTNAG 8 cut(s) 498, 627, 693, 756, 773, 903, 1215, 1332
DpnI GATC 8 cut(s) 139, 212, 225, 258, 349, 618, 651, 1590
DpnII GATC 8 cut(s) 137, 210, 223, 256, 347, 616, 649, 1588
DriI GACNNNNNGTC 1 cut(s) 59
EaeI YGGCCR 2 cut(s) 177, 1617
Eam1104I CTCTTC 1 cut(s) 270
Eam1105I GACNNNNNGTC 1 cut(s) 59
EarI CTCTTC 1 cut(s) 270
EciI GGCGGA 1 cut(s) 66
Ecl136II GAGCTC 1 cut(s) 902
Eco130I CCWWGG 3 cut(s) 331, 403, 983
Eco24I GRGCYC 2 cut(s) 904, 1612
Eco47I GGWCC 1 cut(s) 987
Eco53kI GAGCTC 1 cut(s) 902
Eco57I CTGAAG 3 cut(s) 267, 1553, 1557
Eco72I CACGTG 1 cut(s) 640
Eco81I CCTNAGG 1 cut(s) 756
EcoICRI GAGCTC 1 cut(s) 902
EcoRII CCWGG 3 cut(s) 1407, 1414, 1503
EcoT14I CCWWGG 3 cut(s) 331, 403, 983
EcoT38I GRGCYC 2 cut(s) 904, 1612
ErhI CCWWGG 3 cut(s) 331, 403, 983
FaqI GGGAC 1 cut(s) 379
FauI CCCGC 1 cut(s) 1478
FokI GGATG 2 cut(s) 385, 1058
FriOI GRGCYC 2 cut(s) 904, 1612
FspBI CTAG 7 cut(s) 351, 371, 632, 654, 1077, 1088, 1235
FspI TGCGCA 1 cut(s) 716
GlaI GCGC 2 cut(s) 716, 1467
GsaI CCCAGC 1 cut(s) 462
GsuI CTGGAG 2 cut(s) 333, 849
HaeIII GGCC 6 cut(s) 120, 179, 207, 878, 1522, 1619
HapII CCGG 2 cut(s) 176, 208
HgaI GACGC 3 cut(s) 41, 786, 1472
HhaI GCGC 2 cut(s) 717, 1468
Hin6I GCGC 2 cut(s) 715, 1466
HinP1I GCGC 2 cut(s) 715, 1466
HincII GTYRAC 3 cut(s) 70, 76, 1404
HindII GTYRAC 3 cut(s) 70, 76, 1404
HinfI GANTC 7 cut(s) 60, 125, 496, 1033, 1156, 1231, 1268
HpaII CCGG 2 cut(s) 176, 208
HphI GGTGA 1 cut(s) 97
Hpy166II GTNNAC 6 cut(s) 28, 70, 76, 105, 909, 1404
Hpy188I TCNGA 9 cut(s) 46, 114, 455, 501, 669, 776, 934, 1422, 1614
Hpy188III TCNNGA 8 cut(s) 214, 467, 626, 755, 1214, 1331, 1351, 1571
Hpy8I GTNNAC 6 cut(s) 28, 70, 76, 105, 909, 1404
Hpy99I CGWCG 2 cut(s) 35, 50
HpyAV CCTTC 5 cut(s) 211, 330, 350, 875, 1109
HpyCH4III ACNGT 7 cut(s) 109, 133, 245, 848, 925, 1065, 1401
HpyCH4IV ACGT 5 cut(s) 72, 78, 510, 639, 792
HpyF10VI GCNNNNNNNGC 8 cut(s) 93, 308, 317, 833, 1127, 1491, 1528, 1616
HpyF3I CTNAG 8 cut(s) 498, 627, 693, 756, 773, 903, 1215, 1332
HpySE526I ACGT 5 cut(s) 72, 78, 510, 639, 792
HspAI GCGC 2 cut(s) 715, 1466
Kzo9I GATC 8 cut(s) 137, 210, 223, 256, 347, 616, 649, 1588
LmnI GCTCC 7 cut(s) 101, 237, 314, 455, 961, 1118, 1648
LweI GCATC 6 cut(s) 702, 823, 1036, 1155, 1284, 1335
MabI ACCWGGT 1 cut(s) 1414
MaeI CTAG 7 cut(s) 351, 371, 632, 654, 1077, 1088, 1235
MaeII ACGT 5 cut(s) 72, 78, 510, 639, 792
MaeIII GTNAC 2 cut(s) 842, 1251
MalI GATC 8 cut(s) 139, 212, 225, 258, 349, 618, 651, 1590
MbiI CCGCTC 1 cut(s) 1651
MboI GATC 8 cut(s) 137, 210, 223, 256, 347, 616, 649, 1588
MboII GAAGA 3 cut(s) 257, 1304, 1550
MfeI CAATTG 1 cut(s) 1160
MflI RGATCY 2 cut(s) 210, 347
MhlI GDGCHC 3 cut(s) 89, 904, 1612
MlsI TGGCCA 1 cut(s) 1619
MluNI TGGCCA 1 cut(s) 1619
MlyI GAGTC 3 cut(s) 69, 490, 1262
MmeI TCCRAC 3 cut(s) 69, 115, 1266
Mox20I TGGCCA 1 cut(s) 1619
MroXI GAANNNNTTC 2 cut(s) 1037, 1311
MscI TGGCCA 1 cut(s) 1619
MseI TTAA 6 cut(s) 417, 528, 645, 765, 1283, 1445
Msp20I TGGCCA 1 cut(s) 1619
MspA1I CMGCKG 2 cut(s) 190, 1178
MspI CCGG 2 cut(s) 176, 208
MspR9I CCNGG 3 cut(s) 1409, 1416, 1505
MunI CAATTG 1 cut(s) 1160
Mva1269I GAATGC 1 cut(s) 817
MvaI CCWGG 3 cut(s) 1409, 1416, 1505
MvnI CGCG 1 cut(s) 1466
MwoI GCNNNNNNNGC 8 cut(s) 93, 308, 317, 833, 1127, 1491, 1528, 1616
NcoI CCATGG 1 cut(s) 983
NdeII GATC 8 cut(s) 137, 210, 223, 256, 347, 616, 649, 1588
NheI GCTAGC 1 cut(s) 631
NlaIV GGNNCC 6 cut(s) 97, 391, 877, 1129, 1240, 1413
NmuCI GTSAC 1 cut(s) 842
NsbI TGCGCA 1 cut(s) 716
NspI RCATGY 4 cut(s) 535, 784, 1264, 1640
PaeI GCATGC 1 cut(s) 1264
PcsI WCGNNNNNNNCGW 1 cut(s) 129
PctI GAATGC 1 cut(s) 817
PdmI GAANNNNTTC 2 cut(s) 1037, 1311
PfeI GAWTC 4 cut(s) 125, 1033, 1156, 1231
PflFI GACNNNGTC 1 cut(s) 1063
PflMI CCANNNNNTGG 1 cut(s) 404
PleI GAGTC 3 cut(s) 68, 490, 1262
PmaCI CACGTG 1 cut(s) 640
PmlI CACGTG 1 cut(s) 640
PpsI GAGTC 3 cut(s) 68, 490, 1262
Ppu21I YACGTR 1 cut(s) 640
Psp124BI GAGCTC 1 cut(s) 904
Psp6I CCWGG 3 cut(s) 1407, 1414, 1503
PspCI CACGTG 1 cut(s) 640
PspFI CCCAGC 1 cut(s) 458
PspGI CCWGG 3 cut(s) 1407, 1414, 1503
PspN4I GGNNCC 6 cut(s) 97, 391, 877, 1129, 1240, 1413
PspPI GGNCC 3 cut(s) 205, 876, 987
PstI CTGCAG 1 cut(s) 1627
PstNI CAGNNNCTG 2 cut(s) 193, 944
PsuI RGATCY 2 cut(s) 210, 347
PsyI GACNNNGTC 1 cut(s) 1063
PvuII CAGCTG 1 cut(s) 1178
RsaI GTAC 2 cut(s) 795, 1635
RsaNI GTAC 2 cut(s) 794, 1634
SacI GAGCTC 1 cut(s) 904
SaqAI TTAA 6 cut(s) 417, 528, 645, 765, 1283, 1445
Sau3AI GATC 8 cut(s) 137, 210, 223, 256, 347, 616, 649, 1588
Sau96I GGNCC 3 cut(s) 205, 876, 987
SchI GAGTC 3 cut(s) 69, 490, 1262
ScrFI CCNGG 3 cut(s) 1409, 1416, 1505
SduI GDGCHC 3 cut(s) 89, 904, 1612
SexAI ACCWGGT 1 cut(s) 1414
SfaNI GCATC 6 cut(s) 702, 823, 1036, 1155, 1284, 1335
SfcI CTRYAG 2 cut(s) 1055, 1623
SinI GGWCC 1 cut(s) 987
SphI GCATGC 1 cut(s) 1264
SsiI CCGC 7 cut(s) 51, 190, 574, 1023, 1136, 1485, 1651
SspI AATATT 2 cut(s) 550, 1443
SspMI CTAG 7 cut(s) 351, 371, 632, 654, 1077, 1088, 1235
SstI GAGCTC 1 cut(s) 904
StyD4I CCNGG 3 cut(s) 1407, 1414, 1503
StyI CCWWGG 3 cut(s) 331, 403, 983
TaaI ACNGT 7 cut(s) 109, 133, 245, 848, 925, 1065, 1401
TaiI ACGT 5 cut(s) 75, 81, 513, 642, 795
TaqI TCGA 4 cut(s) 123, 619, 1031, 1591
TatI WGTACW 1 cut(s) 1633
TauI GCSGC 3 cut(s) 193, 1138, 1654
TfiI GAWTC 4 cut(s) 125, 1033, 1156, 1231
Tru1I TTAA 6 cut(s) 417, 528, 645, 765, 1283, 1445
Tru9I TTAA 6 cut(s) 417, 528, 645, 765, 1283, 1445
TscAI CASTG 6 cut(s) 367, 727, 1006, 1501, 1627, 1650
TseFI GTSAC 1 cut(s) 842
Tsp45I GTSAC 1 cut(s) 842
TspDTI ATGAA 5 cut(s) 569, 602, 824, 1238, 1487
TspGWI ACGGA 1 cut(s) 653
TspRI CASTG 6 cut(s) 367, 727, 1006, 1501, 1627, 1650
Tth111I GACNNNGTC 1 cut(s) 1063
Van91I CCANNNNNTGG 1 cut(s) 404
VpaK11BI GGWCC 1 cut(s) 987
XapI RAATTY 4 cut(s) 322, 470, 1307, 1663
XceI RCATGY 4 cut(s) 535, 784, 1264, 1640
XmnI GAANNNNTTC 2 cut(s) 1037, 1311
XspI CTAG 7 cut(s) 351, 371, 632, 654, 1077, 1088, 1235
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.