RLG00000016723

Ubiquitin domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0007479
Physical Location & Seq
Reverse (-)
9400586 .. 9404885
4300 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000016723

Sequence Viewer

Length: 1611 bp
ATGGGAGGCGGAGCCGACGACGCGTCCACCCAATCGGACGGCGGAGACGGAGTCAACATCAACGTCAGAACCCCCAGCGGCTCCAAGTTCGCCGCTCGCATCAGCCTCGACGCCACCGTCCGGGCGCTCAAGGAAGCTCTCTCGCCCAAGTGCGACATTCCGGCTGATCAGCAGCGCCTGATTTACAAGGGTCGGATCTTGAAGGACGATCAGACTCTCCGGAGCTACGGTTTGGAGGCAGATCATGCTGTTCACTTGGTTCGTGGCTTTGCACCATCTGCTGCTGCCAACACTGCTGGTGCCACCAATGCTGGAAGTGAAAATTCTACCCAAGCAAGGGGTTTTGGATCTAATGGAGGTGGAGCATTGGGAGGATCTGGCAATGTCAATGGGATGGGCGGCACTGGTGGTTTATTTGGATCAGGGTTTCCTGACTTGGAACAAGTGCAGCAACAATTTAGAGACATAATGAACATCCCTCTCTTTGACAATCTTGCGAATAGCACTGACATGATACAGAACATGGTTATGAACAACCCTCAAATGCGTGAAATTATTGATCGGAATCCTGAGGTAGGACACGTTCTCAATGATCCTGGCACTATTCGTCAGACACTTGAAGCAGCAAGAAACCCTGAGCTTATGCGTGAGATGATGCGCAACAGTGACAGGGCTATGAGCAACATTGAAGCTTCACCTGAGGGATTTAACATGCTTAGACGTATGTATGAAAATGTACAAGAGCCATTACTGAATGCATCAACCATGGCTGGTGATGCTGGGGGTGATAGTTCAAATCCATTTGCAGCTCTGTTCGTCCCCCAAGGTGAAAACCCAACCAGAACTCAGTCAACTAACTCATCAACTGCTAGTTCTGATTCAGCAACTAGGCCCCCTGCTCCAAATACTGTCCCACTTCCCAACCCATGGTCACCTACAGGCCCTGGAGTTGCCCAAACTAACACCACGAGGTTGAACCCTCTAGGGGATGGTAGGCCGCAGACACCAGCTGGCCGTACTGGACTTAGTTTTCCAGAGTTTGAAGCCACGATGGGTGCGATGCAGGATGCCGCTTTACTGAATCAGGCTGTACAAAACCCAGCTGTTTCTCAGCTCATGCAAAACATCATTTCCAATCCTCAGAATATGAGCGAGAATCTTGGGTCCGACCCCCAGTTACGCAGCATGCTCGATTCAAATTCTTTCTTTAGAGAAATGATGCAAAACCCTGAATTCTTTCGTCAGTTGGCTTCTCCTGAGACTATGCAGTTATTCTTGATTTTGCTACAATCACTTATGTTGCTGCTGGGTGACCAACAACAACAATCAACCCAGGAACCAGGAGAGACAGGAGAGACTGGTGGAGACACAGGAGCAGTTGATAGCACAGGGTTAGAGATGCTGATGAACATGTTTGGTGGGCTTGGCACTGGCAGCCCGGCTGTTCCCAACAGACCAAATGTGCCACCGGAGGAACTCTATGCTGCACAGCTTTCACAACTTCAGGAGATGGGTTTCTTTGATAGACAAGAGAACATACGGGCTCTGATGACCACTGCAGGAAATGTCCATGCAGCAGTAGAGCGCCTATTGGGGAATTCTGGTCGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
UBA ubiquitin

Protein Analysis

537

Amino Acids

57.07

Weight (kDa)

4.64

Isoelectric Point (pI)

46.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rad60-SLD PF11976 19 - 87 3.3e-10 Ubiquitin-2 like Rad60 SUMO-like
ubiquitin PF00240 20 - 88 1.9e-20 Ubiquitin family
UBQLN1 PF23195 148 - 268 2e-42 Ubiquilin-1-like domain
UBQLN1 PF23195 354 - 416 4.2e-06 Ubiquilin-1-like domain
UBA PF00627 494 - 530 5.1e-08 UBA/TS-N domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 116
Acc16I TGCGCA 1 cut(s) 659
AccB1I GGYRCC 1 cut(s) 299
AccB7I CCANNNNNTGG 1 cut(s) 927
AccBSI CCGCTC 1 cut(s) 95
AccII CGCG 1 cut(s) 23
AccIII TCCGGA 1 cut(s) 219
AciI CCGC 7 cut(s) 9, 42, 78, 93, 399, 998, 1071
AclWI GGATC 5 cut(s) 203, 355, 382, 427, 587
AcoI YGGCCR 1 cut(s) 1012
AcsI RAATTY 4 cut(s) 322, 1198, 1232, 1597
AcuI CTGAAG 1 cut(s) 1487
AcyI GRCGYC 1 cut(s) 111
AfaI GTAC 3 cut(s) 738, 1018, 1092
AfiI CCNNNNNNNGG 6 cut(s) 120, 336, 337, 575, 927, 985
AflIII ACRYGT 3 cut(s) 21, 580, 1410
AgsI TTSAA 7 cut(s) 202, 620, 689, 795, 976, 1043, 1197
AhdI GACNNNNNGTC 1 cut(s) 22
AjnI CCWGG 4 cut(s) 595, 943, 1332, 1339
AluBI AGCT 9 cut(s) 137, 225, 640, 692, 809, 1010, 1103, 1114, 1492
AluI AGCT 9 cut(s) 137, 225, 640, 692, 809, 1010, 1103, 1114, 1492
Alw26I GTCTC 6 cut(s) 39, 456, 1253, 1340, 1349, 1359
AlwI GGATC 5 cut(s) 203, 355, 382, 427, 587
AlwNI CAGNNNCTG 2 cut(s) 178, 944
Aor13HI TCCGGA 1 cut(s) 219
AoxI GGCC 4 cut(s) 890, 940, 995, 1012
ApoI RAATTY 4 cut(s) 322, 1198, 1232, 1597
Asp700I GAANNNNTTC 1 cut(s) 1236
AspLEI GCGC 4 cut(s) 127, 177, 660, 1587
AspS9I GGNCC 3 cut(s) 891, 941, 1164
AsuC2I CCSGG 2 cut(s) 122, 1439
AsuHPI GGTGA 6 cut(s) 687, 785, 797, 839, 924, 1322
AvaII GGWCC 1 cut(s) 1164
AxyI CCTNAGG 2 cut(s) 570, 699
BanI GGYRCC 1 cut(s) 299
BanII GRGCYC 1 cut(s) 1546
BauI CACGAG 1 cut(s) 967
BccI CCATC 5 cut(s) 283, 388, 983, 1045, 1504
BceAI ACGGC 2 cut(s) 55, 999
BcgI CGANNNNNNTGC 4 cut(s) 88, 122, 1171, 1205
BciT130I CCWGG 4 cut(s) 597, 945, 1334, 1341
BclI TGATCA 1 cut(s) 166
BcnI CCSGG 2 cut(s) 122, 1439
BcoDI GTCTC 6 cut(s) 39, 456, 1253, 1340, 1349, 1359
BfaI CTAG 3 cut(s) 870, 888, 983
BfmI CTRYAG 2 cut(s) 936, 1557
BfoI RGCGCY 3 cut(s) 128, 178, 1588
Bme1390I CCNGG 6 cut(s) 122, 597, 945, 1334, 1341, 1439
Bme18I GGWCC 1 cut(s) 1164
BmeRI GACNNNNNGTC 1 cut(s) 22
BmgT120I GGNCC 3 cut(s) 891, 941, 1164
BmiI GGNNCC 6 cut(s) 13, 82, 301, 893, 1165, 1338
BmrFI CCNGG 6 cut(s) 122, 597, 945, 1334, 1341, 1439
BmrI ACTGGG 1 cut(s) 1168
BmsI GCATC 8 cut(s) 108, 645, 766, 767, 1050, 1057, 1209, 1389
BmuI ACTGGG 1 cut(s) 1168
BpmI CTGGAG 1 cut(s) 966
Bpu10I CCTNAGC 1 cut(s) 636
BpuEI CTTGAG 1 cut(s) 113
BpuMI CCSGG 2 cut(s) 122, 1439
BsaBI GATNNNNATC 1 cut(s) 564
BsaHI GRCGYC 1 cut(s) 111
BsaJI CCNNGG 5 cut(s) 765, 823, 926, 943, 1332
BsaWI WCCGGW 2 cut(s) 219, 1468
BsaXI ACNNNNNCTCC 4 cut(s) 36, 66, 214, 244
Bsc4I CCNNNNNNNGG 6 cut(s) 120, 336, 337, 575, 927, 985
Bse1I ACTGG 5 cut(s) 409, 1024, 1174, 1363, 1435
Bse21I CCTNAGG 2 cut(s) 570, 699
Bse3DI GCAATG 1 cut(s) 388
Bse8I GATNNNNATC 1 cut(s) 564
BseAI TCCGGA 1 cut(s) 219
BseBI CCWGG 4 cut(s) 597, 945, 1334, 1341
BseDI CCNNGG 5 cut(s) 765, 823, 926, 943, 1332
BseGI GGATG 4 cut(s) 399, 474, 994, 1072
BseJI GATNNNNATC 1 cut(s) 564
BseLI CCNNNNNNNGG 6 cut(s) 120, 336, 337, 575, 927, 985
BseMI GCAATG 1 cut(s) 388
BseMII CTCAG 7 cut(s) 561, 627, 690, 860, 1124, 1154, 1248
BseNI ACTGG 5 cut(s) 409, 1024, 1174, 1363, 1435
BseYI CCCAGC 4 cut(s) 74, 779, 1099, 1306
BsgI GTGCAG 2 cut(s) 467, 1470
Bsh1236I CGCG 1 cut(s) 23
BshFI GGCC 4 cut(s) 892, 942, 997, 1014
BshNI GGYRCC 1 cut(s) 299
BsiSI CCGG 5 cut(s) 121, 161, 220, 1439, 1469
BslFI GGGAC 2 cut(s) 803, 896
BslI CCNNNNNNNGG 6 cut(s) 120, 336, 337, 575, 927, 985
BsmAI GTCTC 6 cut(s) 39, 456, 1253, 1340, 1349, 1359
BsmBI CGTCTC 1 cut(s) 39
BsmFI GGGAC 2 cut(s) 803, 896
BsmI GAATGC 1 cut(s) 760
BsnI GGCC 4 cut(s) 892, 942, 997, 1014
Bsp1286I GDGCHC 1 cut(s) 1546
Bsp13I TCCGGA 1 cut(s) 219
Bsp1407I TGTACA 2 cut(s) 736, 1090
Bsp143I GATC 9 cut(s) 166, 195, 208, 241, 347, 374, 419, 559, 592
Bsp19I CCATGG 2 cut(s) 765, 926
BspACI CCGC 7 cut(s) 9, 42, 78, 93, 399, 998, 1071
BspANI GGCC 4 cut(s) 892, 942, 997, 1014
BspCNI CTCAG 7 cut(s) 562, 628, 691, 859, 1123, 1153, 1249
BspEI TCCGGA 1 cut(s) 219
BspFNI CGCG 1 cut(s) 23
BspLI GGNNCC 6 cut(s) 13, 82, 301, 893, 1165, 1338
BspMAI CTGCAG 1 cut(s) 1561
BspPI GGATC 5 cut(s) 203, 355, 382, 427, 587
BspT107I GGYRCC 1 cut(s) 299
BsrBI CCGCTC 1 cut(s) 95
BsrDI GCAATG 1 cut(s) 388
BsrGI TGTACA 2 cut(s) 736, 1090
BsrI ACTGG 5 cut(s) 409, 1024, 1174, 1363, 1435
BssECI CCNNGG 5 cut(s) 765, 823, 926, 943, 1332
BssMI GATC 9 cut(s) 166, 195, 208, 241, 347, 374, 419, 559, 592
BssNI GRCGYC 1 cut(s) 111
BssSI CACGAG 1 cut(s) 967
BssT1I CCWWGG 3 cut(s) 765, 823, 926
Bst2BI CACGAG 1 cut(s) 967
Bst2UI CCWGG 4 cut(s) 597, 945, 1334, 1341
Bst4CI ACNGT 4 cut(s) 118, 230, 665, 910
BstACI GRCGYC 1 cut(s) 111
BstAPI GCANNNNNTGC 2 cut(s) 245, 278
BstAUI TGTACA 2 cut(s) 736, 1090
BstC8I GCNNGC 3 cut(s) 97, 1012, 1187
BstDEI CTNAG 9 cut(s) 570, 636, 699, 716, 846, 1025, 1110, 1140, 1257
BstDSI CCRYGG 2 cut(s) 765, 926
BstEII GGTNACC 2 cut(s) 930, 1310
BstENI CCTNNNNNAGG 1 cut(s) 573
BstF5I GGATG 4 cut(s) 399, 474, 994, 1072
BstFNI CGCG 1 cut(s) 23
BstH2I RGCGCY 3 cut(s) 128, 178, 1588
BstHHI GCGC 4 cut(s) 127, 177, 660, 1587
BstKTI GATC 9 cut(s) 169, 198, 211, 244, 350, 377, 422, 562, 595
BstMAI GTCTC 6 cut(s) 39, 456, 1253, 1340, 1349, 1359
BstMBI GATC 9 cut(s) 166, 195, 208, 241, 347, 374, 419, 559, 592
BstMWI GCNNNNNNNGC 7 cut(s) 20, 245, 278, 293, 308, 776, 1434
BstNI CCWGG 4 cut(s) 597, 945, 1334, 1341
BstNSI RCATGY 3 cut(s) 715, 1189, 1414
BstPI GGTNACC 2 cut(s) 930, 1310
BstSCI CCNGG 6 cut(s) 120, 595, 943, 1332, 1339, 1437
BstSFI CTRYAG 2 cut(s) 936, 1557
BstUI CGCG 1 cut(s) 23
BstX2I RGATCY 3 cut(s) 195, 347, 374
BstYI RGATCY 3 cut(s) 195, 347, 374
Bsu36I CCTNAGG 2 cut(s) 570, 699
BsuRI GGCC 4 cut(s) 892, 942, 997, 1014
BtgI CCRYGG 2 cut(s) 765, 926
BtgZI GCGATG 1 cut(s) 1073
BtsCI GGATG 4 cut(s) 399, 474, 994, 1072
BtsI GCAGTG 2 cut(s) 291, 1554
BtsIMutI CAGTG 6 cut(s) 291, 402, 504, 670, 1428, 1554
Cac8I GCNNGC 3 cut(s) 97, 1012, 1187
CaiI CAGNNNCTG 2 cut(s) 178, 944
CfoI GCGC 4 cut(s) 127, 177, 660, 1587
Cfr13I GGNCC 3 cut(s) 891, 941, 1164
CseI GACGC 3 cut(s) 12, 29, 119
Csp6I GTAC 3 cut(s) 737, 1017, 1091
CviQI GTAC 3 cut(s) 737, 1017, 1091
DdeI CTNAG 9 cut(s) 570, 636, 699, 716, 846, 1025, 1110, 1140, 1257
DpnI GATC 9 cut(s) 168, 197, 210, 243, 349, 376, 421, 561, 594
DpnII GATC 9 cut(s) 166, 195, 208, 241, 347, 374, 419, 559, 592
DrdI GACNNNNNNGTC 1 cut(s) 116
DriI GACNNNNNGTC 1 cut(s) 22
DseDI GACNNNNNNGTC 1 cut(s) 116
EaeI YGGCCR 1 cut(s) 1012
Eam1105I GACNNNNNGTC 1 cut(s) 22
EciI GGCGGA 2 cut(s) 24, 57
Eco130I CCWWGG 3 cut(s) 765, 823, 926
Eco24I GRGCYC 1 cut(s) 1546
Eco47I GGWCC 1 cut(s) 1164
Eco57I CTGAAG 1 cut(s) 1487
Eco81I CCTNAGG 2 cut(s) 570, 699
Eco91I GGTNACC 2 cut(s) 930, 1310
EcoNI CCTNNNNNAGG 1 cut(s) 573
EcoO109I RGGNCCY 2 cut(s) 891, 941
EcoO65I GGTNACC 2 cut(s) 930, 1310
EcoRI GAATTC 2 cut(s) 1232, 1597
EcoRII CCWGG 4 cut(s) 595, 943, 1332, 1339
EcoT14I CCWWGG 3 cut(s) 765, 823, 926
EcoT22I ATGCAT 1 cut(s) 760
EcoT38I GRGCYC 1 cut(s) 1546
ErhI CCWWGG 3 cut(s) 765, 823, 926
Esp3I CGTCTC 1 cut(s) 39
FaqI GGGAC 2 cut(s) 803, 896
FbaI TGATCA 1 cut(s) 166
FokI GGATG 4 cut(s) 406, 461, 1001, 1079
FriOI GRGCYC 1 cut(s) 1546
FspBI CTAG 3 cut(s) 870, 888, 983
FspI TGCGCA 1 cut(s) 659
GlaI GCGC 4 cut(s) 126, 176, 659, 1586
GsaI CCCAGC 4 cut(s) 78, 783, 1103, 1310
GsuI CTGGAG 1 cut(s) 966
HaeII RGCGCY 3 cut(s) 128, 178, 1588
HaeIII GGCC 4 cut(s) 892, 942, 997, 1014
HapII CCGG 5 cut(s) 121, 161, 220, 1439, 1469
HgaI GACGC 3 cut(s) 12, 29, 119
HhaI GCGC 4 cut(s) 127, 177, 660, 1587
Hin1I GRCGYC 1 cut(s) 111
Hin6I GCGC 4 cut(s) 125, 175, 658, 1585
HinP1I GCGC 4 cut(s) 125, 175, 658, 1585
HincII GTYRAC 2 cut(s) 55, 852
HindII GTYRAC 2 cut(s) 55, 852
HindIII AAGCTT 1 cut(s) 690
HinfI GANTC 7 cut(s) 51, 214, 565, 878, 1081, 1156, 1193
HpaII CCGG 5 cut(s) 121, 161, 220, 1439, 1469
HphI GGTGA 6 cut(s) 687, 785, 797, 839, 924, 1322
Hpy166II GTNNAC 4 cut(s) 27, 55, 253, 852
Hpy188III TCNNGA 8 cut(s) 199, 220, 431, 569, 1034, 1256, 1276, 1505
Hpy8I GTNNAC 4 cut(s) 27, 55, 253, 852
Hpy99I CGWCG 3 cut(s) 20, 23, 113
HpyAV CCTTC 1 cut(s) 196
HpyCH4III ACNGT 4 cut(s) 118, 230, 665, 910
HpyCH4IV ACGT 3 cut(s) 63, 582, 721
HpyF10VI GCNNNNNNNGC 7 cut(s) 20, 245, 278, 293, 308, 776, 1434
HpyF3I CTNAG 9 cut(s) 570, 636, 699, 716, 846, 1025, 1110, 1140, 1257
HpySE526I ACGT 3 cut(s) 63, 582, 721
Hsp92I GRCGYC 1 cut(s) 111
HspAI GCGC 4 cut(s) 125, 175, 658, 1585
Kpn2I TCCGGA 1 cut(s) 219
Ksp22I TGATCA 1 cut(s) 166
Kzo9I GATC 9 cut(s) 166, 195, 208, 241, 347, 374, 419, 559, 592
LmnI GCTCC 6 cut(s) 11, 86, 222, 362, 904, 1373
LweI GCATC 8 cut(s) 108, 645, 766, 767, 1050, 1057, 1209, 1389
MaeI CTAG 3 cut(s) 870, 888, 983
MaeII ACGT 3 cut(s) 63, 582, 721
MaeIII GTNAC 4 cut(s) 665, 930, 1176, 1310
MalI GATC 9 cut(s) 168, 197, 210, 243, 349, 376, 421, 561, 594
MbiI CCGCTC 1 cut(s) 95
MboI GATC 9 cut(s) 166, 195, 208, 241, 347, 374, 419, 559, 592
MflI RGATCY 3 cut(s) 195, 347, 374
MhlI GDGCHC 1 cut(s) 1546
MluCI AATT 6 cut(s) 322, 455, 552, 1198, 1232, 1597
MluI ACGCGT 1 cut(s) 21
MlyI GAGTC 2 cut(s) 60, 208
MmeI TCCRAC 2 cut(s) 173, 1191
Mph1103I ATGCAT 1 cut(s) 760
MroI TCCGGA 1 cut(s) 219
MroXI GAANNNNTTC 1 cut(s) 1236
MseI TTAA 1 cut(s) 708
MslI CAYNNNNRTG 2 cut(s) 509, 527
MspA1I CMGCKG 3 cut(s) 78, 1010, 1103
MspI CCGG 5 cut(s) 121, 161, 220, 1439, 1469
MspR9I CCNGG 6 cut(s) 122, 597, 945, 1334, 1341, 1439
Mva1269I GAATGC 1 cut(s) 760
MvaI CCWGG 4 cut(s) 597, 945, 1334, 1341
MvnI CGCG 1 cut(s) 23
MwoI GCNNNNNNNGC 7 cut(s) 20, 245, 278, 293, 308, 776, 1434
NciI CCSGG 2 cut(s) 122, 1439
NcoI CCATGG 2 cut(s) 765, 926
NdeII GATC 9 cut(s) 166, 195, 208, 241, 347, 374, 419, 559, 592
NlaIV GGNNCC 6 cut(s) 13, 82, 301, 893, 1165, 1338
NmuCI GTSAC 3 cut(s) 665, 930, 1310
NsbI TGCGCA 1 cut(s) 659
NsiI ATGCAT 1 cut(s) 760
NspI RCATGY 3 cut(s) 715, 1189, 1414
PaeI GCATGC 1 cut(s) 1189
PciI ACATGT 1 cut(s) 1410
PcsI WCGNNNNNNNCGW 2 cut(s) 114, 1055
PctI GAATGC 1 cut(s) 760
PdmI GAANNNNTTC 1 cut(s) 1236
PfeI GAWTC 5 cut(s) 565, 878, 1081, 1156, 1193
PflFI GACNNNGTC 1 cut(s) 50
PflMI CCANNNNNTGG 1 cut(s) 927
PleI GAGTC 2 cut(s) 59, 208
PpsI GAGTC 2 cut(s) 59, 208
PscI ACATGT 1 cut(s) 1410
Psp6I CCWGG 4 cut(s) 595, 943, 1332, 1339
PspEI GGTNACC 2 cut(s) 930, 1310
PspFI CCCAGC 4 cut(s) 74, 779, 1099, 1306
PspGI CCWGG 4 cut(s) 595, 943, 1332, 1339
PspN4I GGNNCC 6 cut(s) 13, 82, 301, 893, 1165, 1338
PspPI GGNCC 3 cut(s) 891, 941, 1164
PsrI GAACNNNNNNTAC 2 cut(s) 567, 599
PstI CTGCAG 1 cut(s) 1561
PstNI CAGNNNCTG 2 cut(s) 178, 944
PsuI RGATCY 3 cut(s) 195, 347, 374
PsyI GACNNNGTC 1 cut(s) 50
PvuII CAGCTG 2 cut(s) 1010, 1103
RsaI GTAC 3 cut(s) 738, 1018, 1092
RsaNI GTAC 3 cut(s) 737, 1017, 1091
RseI CAYNNNNRTG 2 cut(s) 509, 527
SaqAI TTAA 1 cut(s) 708
Sau3AI GATC 9 cut(s) 166, 195, 208, 241, 347, 374, 419, 559, 592
Sau96I GGNCC 3 cut(s) 891, 941, 1164
SchI GAGTC 2 cut(s) 60, 208
ScrFI CCNGG 6 cut(s) 122, 597, 945, 1334, 1341, 1439
SduI GDGCHC 1 cut(s) 1546
SfaNI GCATC 8 cut(s) 108, 645, 766, 767, 1050, 1057, 1209, 1389
SfcI CTRYAG 2 cut(s) 936, 1557
SinI GGWCC 1 cut(s) 1164
SmiMI CAYNNNNRTG 2 cut(s) 509, 527
SmlI CTYRAG 1 cut(s) 128
SmoI CTYRAG 1 cut(s) 128
SphI GCATGC 1 cut(s) 1189
Sse9I AATT 6 cut(s) 322, 455, 552, 1198, 1232, 1597
SsiI CCGC 7 cut(s) 9, 42, 78, 93, 399, 998, 1071
SspMI CTAG 3 cut(s) 870, 888, 983
StyD4I CCNGG 6 cut(s) 120, 595, 943, 1332, 1339, 1437
StyI CCWWGG 3 cut(s) 765, 823, 926
TaaI ACNGT 4 cut(s) 118, 230, 665, 910
TaiI ACGT 3 cut(s) 66, 585, 724
TaqI TCGA 3 cut(s) 108, 1191, 1606
TasI AATT 6 cut(s) 322, 455, 552, 1198, 1232, 1597
TatI WGTACW 2 cut(s) 736, 1090
TauI GCSGC 5 cut(s) 81, 95, 402, 1000, 1073
TfiI GAWTC 5 cut(s) 565, 878, 1081, 1156, 1193
Tru1I TTAA 1 cut(s) 708
Tru9I TTAA 1 cut(s) 708
TscAI CASTG 6 cut(s) 298, 409, 511, 670, 1435, 1561
TseFI GTSAC 3 cut(s) 665, 930, 1310
Tsp45I GTSAC 3 cut(s) 665, 930, 1310
TspDTI ATGAA 4 cut(s) 485, 545, 744, 1421
TspGWI ACGGA 1 cut(s) 63
TspRI CASTG 6 cut(s) 298, 409, 511, 670, 1435, 1561
Tth111I GACNNNGTC 1 cut(s) 50
Van91I CCANNNNNTGG 1 cut(s) 927
VpaK11BI GGWCC 1 cut(s) 1164
XagI CCTNNNNNAGG 1 cut(s) 573
XapI RAATTY 4 cut(s) 322, 1198, 1232, 1597
XceI RCATGY 3 cut(s) 715, 1189, 1414
XmnI GAANNNNTTC 1 cut(s) 1236
XspI CTAG 3 cut(s) 870, 888, 983
Zsp2I ATGCAT 1 cut(s) 760
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.