MD15G1269900.v1.1

Belongs to the glycosyltransferase 8 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Forward (+)
23359227 .. 23360344
1118 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1269900.v1.1.491

Sequence Viewer

Length: 1068 bp
ATGCTCTCTTTCTTCATCAGCTTCATCCTTCTCTTTACGACCACCACCAATGCCGCCGTCACTACTTCTGAACGACTTAGGGAAGCGCTCGCCACATCCACCACTCAAAGATTCAAGGAAGCACCGAAATTCTACAACTCCCCCAGCTGCCCCGACCTCAACAACCACGAGCACAAGGTGGCCGTGTGCTCGGATGAGGCCGTCCACGTGGCAATGACCCTCGACGCCGCCTACCTCCGCGGCTCAATGGCTGCCATTCTCTCCGTCCTCCAACACTCCTCCTGCCCGGAAAATGTTATCTTCCACTTCGTGTCCTCCTCCTCCACCTCCAACTCCCAACTCCTCCAGCAAACCATCGCCAAGTCATTTCCCTACTTGAAATTCCGAGTCTACCCCTTCGATGACTCGGCCGTTGAGGGGCTCATCTCGACGTCGATCCGCTCCGCCCTCGACTGCCCGCTCAACTATGCCCGCAACTACCTCGCCAACATCCTACCGACATGTGTCCGCCATGTCGTCTACCTGGACTCCGACATCATCCTCGTCGATGACATTTCCAAGCTGGCGTCGACCCCGCTGGGACCCACCCAAGTCCTTGCCGCCCCGGAGTACTGCAACGCCAACTTCACATCCTACTTTACGGCGTCGTTTTGGTCGAACCCGACACTCTCCCTTACCTTCGAGAACCGCAAGGCTTGCTACTTCAACACCGGCGTCATGGTCATCGACTTGGACAAGTGGAGATCCGGCGGGTACACGGATCGGATCGTGGAGTGGATGGAGCTCCAGAAGCGGATGCGGATCTACGAGCTCGGGTCCCTGCCGCCGTTCCTATTGGTTTTCGCCGGAAACATCGCTGCCGTGGACCACCGATGGAACCAGCACGGACTGGGCGGAGATAACTTTCGTGGGTTGTGTCGGGATTTGCATCCGGGTCCGGTGAGCTTGCTGCATTGGAGCGGGAAGGGGAAGCCGTGGGTGAGACTAGACGCCAACCGGCCGTGCCCATTGGATGCTCTGTGGGCCCCATATGATCTGTTACAGACGCCCTTCGCGCTGGAGTCTTGA

Protein Analysis

356

Amino Acids

39.71

Weight (kDa)

6.36

Isoelectric Point (pI)

40.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_8 PF01501 69 - 328 3.4e-50 Glycosyl transferase family 8
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013971)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G50760
fragaria_vesca FvH4_1g14120
malus_domestica MD02G1155400.v1.1 MD15G1269900.v1.1
prunus_persica Prupe.7G148000_v2.0.a1
pyrus_communis pycom02g12300 pycom15g23400
rosa_chinensis RchiOBHm_Chr2g0102811
rosa_laevigata RLG00000017180
rosa_multiflora Rmu_sc0006537.1_g000025
rosa_roxburghii Rroxscaffold_2G00140310
rosa_rugosa Rorug02G0109500
rosa_samantha Rh2AG158000 Rh2BG164500 Rh2CG164200 Rh2DG163300
rosa_wichuraiana Rw2G012280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 434
AccBSI CCGCTC 3 cut(s) 441, 460, 960
AccI GTMKAC 3 cut(s) 390, 519, 569
AccII CGCG 2 cut(s) 240, 1055
AclWI GGATC 5 cut(s) 430, 738, 768, 773, 809
AcoI YGGCCR 3 cut(s) 180, 408, 998
AcsI RAATTY 2 cut(s) 128, 380
AcvI CACGTG 1 cut(s) 208
AcyI GRCGYC 7 cut(s) 225, 431, 566, 644, 714, 990, 1046
AdeI CACNNNGTG 2 cut(s) 178, 310
AfaI GTAC 2 cut(s) 611, 755
AfeI AGCGCT 1 cut(s) 87
AfiI CCNNNNNNNGG 1 cut(s) 417
AflIII ACRYGT 1 cut(s) 500
AgsI TTSAA 3 cut(s) 115, 379, 706
AjnI CCWGG 1 cut(s) 522
AluBI AGCT 6 cut(s) 21, 147, 562, 784, 811, 945
AluI AGCT 6 cut(s) 21, 147, 562, 784, 811, 945
Alw21I GWGCWC 4 cut(s) 174, 191, 786, 813
Alw26I GTCTC 1 cut(s) 976
AlwI GGATC 5 cut(s) 430, 738, 768, 773, 809
Ama87I CYCGRG 1 cut(s) 812
Aor51HI AGCGCT 1 cut(s) 87
AoxI GGCC 5 cut(s) 180, 198, 408, 998, 1023
ApaI GGGCCC 1 cut(s) 1027
ApeKI GCWGC 4 cut(s) 147, 251, 857, 949
ApoI RAATTY 2 cut(s) 128, 380
AspLEI GCGC 2 cut(s) 88, 1057
AspS9I GGNCC 6 cut(s) 581, 816, 865, 935, 1023, 1024
AsuC2I CCSGG 3 cut(s) 287, 605, 933
AsuHPI GGTGA 2 cut(s) 952, 991
AvaI CYCGRG 1 cut(s) 812
AvaII GGWCC 4 cut(s) 581, 816, 865, 935
BaeGI GKGCMC 2 cut(s) 1007, 1027
BanII GRGCYC 4 cut(s) 423, 786, 813, 1027
BauI CACGAG 1 cut(s) 167
BbrPI CACGTG 1 cut(s) 208
Bbv12I GWGCWC 4 cut(s) 174, 191, 786, 813
BbvI GCAGC 4 cut(s) 134, 238, 844, 936
BccI CCATC 3 cut(s) 362, 772, 867
BceAI ACGGC 9 cut(s) 41, 167, 185, 395, 657, 811, 845, 958, 985
BcgI CGANNNNNNTGC 2 cut(s) 463, 497
BciT130I CCWGG 1 cut(s) 524
BcnI CCSGG 3 cut(s) 287, 605, 933
BcoDI GTCTC 1 cut(s) 976
BfaI CTAG 1 cut(s) 986
BfoI RGCGCY 1 cut(s) 89
BisI GCNGC 9 cut(s) 54, 148, 228, 241, 252, 600, 824, 858, 950
BlsI GCNGC 9 cut(s) 55, 149, 229, 242, 253, 601, 825, 859, 951
BmcAI AGTACT 1 cut(s) 611
Bme1390I CCNGG 4 cut(s) 287, 524, 605, 933
Bme18I GGWCC 4 cut(s) 581, 816, 865, 935
BmeT110I CYCGRG 1 cut(s) 812
BmgT120I GGNCC 6 cut(s) 581, 816, 865, 935, 1023, 1024
BmiI GGNNCC 8 cut(s) 582, 583, 817, 818, 878, 936, 1025, 1026
BmrFI CCNGG 4 cut(s) 287, 524, 605, 933
BmrI ACTGGG 1 cut(s) 899
BmsI GCATC 3 cut(s) 786, 937, 1003
BmuI ACTGGG 1 cut(s) 899
BoxI GACNNNNGTC 1 cut(s) 503
BpmI CTGGAG 2 cut(s) 329, 770
BpuMI CCSGG 3 cut(s) 287, 605, 933
BsaAI YACGTR 1 cut(s) 208
BsaBI GATNNNNATC 2 cut(s) 800, 927
BsaHI GRCGYC 7 cut(s) 225, 431, 566, 644, 714, 990, 1046
BsaJI CCNNGG 4 cut(s) 238, 603, 861, 974
BsaWI WCCGGW 1 cut(s) 937
BsaXI ACNNNNNCTCC 2 cut(s) 512, 542
Bsc4I CCNNNNNNNGG 1 cut(s) 417
Bse118I RCCGGY 2 cut(s) 710, 996
Bse1I ACTGG 1 cut(s) 894
Bse3DI GCAATG 1 cut(s) 219
Bse8I GATNNNNATC 2 cut(s) 800, 927
BseBI CCWGG 1 cut(s) 524
BseDI CCNNGG 4 cut(s) 238, 603, 861, 974
BseJI GATNNNNATC 2 cut(s) 800, 927
BseLI CCNNNNNNNGG 1 cut(s) 417
BseMI GCAATG 1 cut(s) 219
BseNI ACTGG 1 cut(s) 894
BseRI GAGGAG 4 cut(s) 268, 307, 310, 332
BseSI GKGCMC 2 cut(s) 1007, 1027
BseX3I CGGCCG 2 cut(s) 408, 998
BseXI GCAGC 4 cut(s) 134, 238, 844, 936
BseYI CCCAGC 2 cut(s) 143, 577
Bsh1236I CGCG 2 cut(s) 240, 1055
Bsh1285I CGRYCG 2 cut(s) 411, 1001
BshFI GGCC 5 cut(s) 182, 200, 410, 1000, 1025
BsiEI CGRYCG 2 cut(s) 411, 1001
BsiHKAI GWGCWC 4 cut(s) 174, 191, 786, 813
BsiHKCI CYCGRG 1 cut(s) 812
BsiSI CCGG 8 cut(s) 287, 605, 711, 747, 846, 932, 938, 997
BslFI GGGAC 2 cut(s) 594, 802
BslI CCNNNNNNNGG 1 cut(s) 417
BsmAI GTCTC 1 cut(s) 976
BsmFI GGGAC 2 cut(s) 594, 802
BsnI GGCC 5 cut(s) 182, 200, 410, 1000, 1025
BsoBI CYCGRG 1 cut(s) 812
Bsp120I GGGCCC 1 cut(s) 1023
Bsp1286I GDGCHC 7 cut(s) 174, 191, 423, 786, 813, 1007, 1027
Bsp143I GATC 6 cut(s) 435, 743, 760, 765, 801, 1033
BspANI GGCC 5 cut(s) 182, 200, 410, 1000, 1025
BspFNI CGCG 2 cut(s) 240, 1055
BspLI GGNNCC 8 cut(s) 582, 583, 817, 818, 878, 936, 1025, 1026
BspPI GGATC 5 cut(s) 430, 738, 768, 773, 809
BsrBI CCGCTC 3 cut(s) 441, 460, 960
BsrDI GCAATG 1 cut(s) 219
BsrFI RCCGGY 2 cut(s) 710, 996
BsrI ACTGG 1 cut(s) 894
BssAI RCCGGY 2 cut(s) 710, 996
BssECI CCNNGG 4 cut(s) 238, 603, 861, 974
BssMI GATC 6 cut(s) 435, 743, 760, 765, 801, 1033
BssNI GRCGYC 7 cut(s) 225, 431, 566, 644, 714, 990, 1046
BssSI CACGAG 1 cut(s) 167
Bst2BI CACGAG 1 cut(s) 167
Bst2UI CCWGG 1 cut(s) 524
BstACI GRCGYC 7 cut(s) 225, 431, 566, 644, 714, 990, 1046
BstAPI GCANNNNNTGC 1 cut(s) 696
BstBAI YACGTR 1 cut(s) 208
BstC8I GCNNGC 6 cut(s) 90, 458, 472, 564, 697, 947
BstDEI CTNAG 1 cut(s) 77
BstDSI CCRYGG 3 cut(s) 238, 861, 974
BstFNI CGCG 2 cut(s) 240, 1055
BstH2I RGCGCY 1 cut(s) 89
BstHHI GCGC 2 cut(s) 88, 1057
BstKTI GATC 6 cut(s) 438, 746, 763, 768, 804, 1036
BstMAI GTCTC 1 cut(s) 976
BstMBI GATC 6 cut(s) 435, 743, 760, 765, 801, 1033
BstMCI CGRYCG 2 cut(s) 411, 1001
BstMWI GCNNNNNNNGC 4 cut(s) 696, 790, 1022, 1054
BstNI CCWGG 1 cut(s) 524
BstNSI RCATGY 1 cut(s) 504
BstPAI GACNNNNGTC 1 cut(s) 503
BstSCI CCNGG 4 cut(s) 285, 522, 603, 931
BstSLI GKGCMC 2 cut(s) 1007, 1027
BstUI CGCG 2 cut(s) 240, 1055
BstV1I GCAGC 4 cut(s) 134, 238, 844, 936
BstX2I RGATCY 2 cut(s) 743, 801
BstYI RGATCY 2 cut(s) 743, 801
BstZI CGGCCG 2 cut(s) 408, 998
BsuRI GGCC 5 cut(s) 182, 200, 410, 1000, 1025
BtgI CCRYGG 3 cut(s) 238, 861, 974
BtgZI GCGATG 2 cut(s) 340, 838
Cac8I GCNNGC 6 cut(s) 90, 458, 472, 564, 697, 947
CfoI GCGC 2 cut(s) 88, 1057
Cfr10I RCCGGY 2 cut(s) 710, 996
Cfr13I GGNCC 6 cut(s) 581, 816, 865, 935, 1023, 1024
Cfr42I CCGCGG 1 cut(s) 241
CseI GACGC 6 cut(s) 233, 555, 633, 703, 998, 1054
Csp6I GTAC 2 cut(s) 610, 754
CviAII CATG 3 cut(s) 501, 512, 718
CviQI GTAC 2 cut(s) 610, 754
DdeI CTNAG 1 cut(s) 77
DpnI GATC 6 cut(s) 437, 745, 762, 767, 803, 1035
DpnII GATC 6 cut(s) 435, 743, 760, 765, 801, 1033
DraIII CACNNNGTG 2 cut(s) 178, 310
EaeI YGGCCR 3 cut(s) 180, 408, 998
EagI CGGCCG 2 cut(s) 408, 998
EciI GGCGGA 3 cut(s) 433, 497, 909
Ecl136II GAGCTC 2 cut(s) 784, 811
EclXI CGGCCG 2 cut(s) 408, 998
Eco24I GRGCYC 4 cut(s) 423, 786, 813, 1027
Eco47I GGWCC 4 cut(s) 581, 816, 865, 935
Eco47III AGCGCT 1 cut(s) 87
Eco52I CGGCCG 2 cut(s) 408, 998
Eco53kI GAGCTC 2 cut(s) 784, 811
Eco72I CACGTG 1 cut(s) 208
Eco88I CYCGRG 1 cut(s) 812
EcoICRI GAGCTC 2 cut(s) 784, 811
EcoO109I RGGNCCY 3 cut(s) 581, 816, 1024
EcoRII CCWGG 1 cut(s) 522
EcoT38I GRGCYC 4 cut(s) 423, 786, 813, 1027
FaeI CATG 3 cut(s) 504, 515, 721
FaiI YATR 6 cut(s) 468, 502, 513, 719, 1030, 1032
FaqI GGGAC 2 cut(s) 594, 802
FatI CATG 3 cut(s) 500, 511, 717
FauI CCCGC 5 cut(s) 465, 479, 582, 743, 953
FauNDI CATATG 1 cut(s) 1030
FblI GTMKAC 3 cut(s) 390, 519, 569
Fnu4HI GCNGC 9 cut(s) 54, 148, 228, 241, 252, 600, 824, 858, 950
FriOI GRGCYC 4 cut(s) 423, 786, 813, 1027
Fsp4HI GCNGC 9 cut(s) 54, 148, 228, 241, 252, 600, 824, 858, 950
FspBI CTAG 1 cut(s) 986
GlaI GCGC 2 cut(s) 87, 1056
GluI GCNGC 9 cut(s) 54, 148, 228, 241, 252, 600, 824, 858, 950
GsaI CCCAGC 2 cut(s) 147, 581
GsuI CTGGAG 2 cut(s) 329, 770
HaeII RGCGCY 1 cut(s) 89
HaeIII GGCC 5 cut(s) 182, 200, 410, 1000, 1025
HapII CCGG 8 cut(s) 287, 605, 711, 747, 846, 932, 938, 997
HgaI GACGC 6 cut(s) 233, 555, 633, 703, 998, 1054
HhaI GCGC 2 cut(s) 88, 1057
Hin1I GRCGYC 7 cut(s) 225, 431, 566, 644, 714, 990, 1046
Hin1II CATG 3 cut(s) 504, 515, 721
Hin6I GCGC 2 cut(s) 86, 1055
HinP1I GCGC 2 cut(s) 86, 1055
HincII GTYRAC 1 cut(s) 570
HindII GTYRAC 1 cut(s) 570
HinfI GANTC 5 cut(s) 111, 387, 404, 527, 1061
HpaII CCGG 8 cut(s) 287, 605, 711, 747, 846, 932, 938, 997
HphI GGTGA 2 cut(s) 952, 991
Hpy166II GTNNAC 6 cut(s) 205, 391, 520, 570, 756, 865
Hpy188I TCNGA 5 cut(s) 70, 193, 386, 532, 765
Hpy188III TCNNGA 5 cut(s) 427, 682, 787, 920, 1065
Hpy8I GTNNAC 6 cut(s) 205, 391, 520, 570, 756, 865
Hpy99I CGWCG 6 cut(s) 227, 433, 436, 548, 571, 649
HpyAV CCTTC 5 cut(s) 38, 406, 688, 958, 1060
HpyCH4IV ACGT 2 cut(s) 207, 431
HpyCH4V TGCA 3 cut(s) 615, 928, 952
HpyF10VI GCNNNNNNNGC 4 cut(s) 696, 790, 1022, 1054
HpyF3I CTNAG 1 cut(s) 77
HpySE526I ACGT 2 cut(s) 207, 431
Hsp92I GRCGYC 7 cut(s) 225, 431, 566, 644, 714, 990, 1046
Hsp92II CATG 3 cut(s) 504, 515, 721
HspAI GCGC 2 cut(s) 86, 1055
KflI GGGWCCC 2 cut(s) 581, 816
KspI CCGCGG 1 cut(s) 241
Kzo9I GATC 6 cut(s) 435, 743, 760, 765, 801, 1033
LmnI GCTCC 4 cut(s) 446, 781, 789, 957
Lsp1109I GCAGC 4 cut(s) 134, 238, 844, 936
LweI GCATC 3 cut(s) 786, 937, 1003
MaeI CTAG 1 cut(s) 986
MaeII ACGT 2 cut(s) 207, 431
MaeIII GTNAC 2 cut(s) 58, 1038
MalI GATC 6 cut(s) 437, 745, 762, 767, 803, 1035
MbiI CCGCTC 3 cut(s) 441, 460, 960
MboI GATC 6 cut(s) 435, 743, 760, 765, 801, 1033
MboII GAAGA 2 cut(s) 4, 292
MflI RGATCY 2 cut(s) 743, 801
MhlI GDGCHC 7 cut(s) 174, 191, 423, 786, 813, 1007, 1027
MluCI AATT 2 cut(s) 128, 380
MlyI GAGTC 3 cut(s) 396, 398, 521
MmeI TCCRAC 3 cut(s) 295, 354, 555
MspA1I CMGCKG 3 cut(s) 147, 240, 577
MspI CCGG 8 cut(s) 287, 605, 711, 747, 846, 932, 938, 997
MspR9I CCNGG 4 cut(s) 287, 524, 605, 933
MvaI CCWGG 1 cut(s) 524
MvnI CGCG 2 cut(s) 240, 1055
MwoI GCNNNNNNNGC 4 cut(s) 696, 790, 1022, 1054
NciI CCSGG 3 cut(s) 287, 605, 933
NdeI CATATG 1 cut(s) 1030
NdeII GATC 6 cut(s) 435, 743, 760, 765, 801, 1033
NlaIII CATG 3 cut(s) 504, 515, 721
NlaIV GGNNCC 8 cut(s) 582, 583, 817, 818, 878, 936, 1025, 1026
NmeAIII GCCGAG 1 cut(s) 386
NmuCI GTSAC 1 cut(s) 58
NspI RCATGY 1 cut(s) 504
PciI ACATGT 1 cut(s) 500
PcsI WCGNNNNNNNCGW 1 cut(s) 653
PfeI GAWTC 1 cut(s) 111
PkrI GCNGC 9 cut(s) 55, 149, 229, 242, 253, 601, 825, 859, 951
PleI GAGTC 3 cut(s) 395, 398, 521
PmaCI CACGTG 1 cut(s) 208
PmlI CACGTG 1 cut(s) 208
PpsI GAGTC 3 cut(s) 395, 398, 521
Ppu21I YACGTR 1 cut(s) 208
PpuMI RGGWCCY 2 cut(s) 581, 816
PscI ACATGT 1 cut(s) 500
PshAI GACNNNNGTC 1 cut(s) 503
Psp124BI GAGCTC 2 cut(s) 786, 813
Psp5II RGGWCCY 2 cut(s) 581, 816
Psp6I CCWGG 1 cut(s) 522
PspCI CACGTG 1 cut(s) 208
PspFI CCCAGC 2 cut(s) 143, 577
PspGI CCWGG 1 cut(s) 522
PspN4I GGNNCC 8 cut(s) 582, 583, 817, 818, 878, 936, 1025, 1026
PspOMI GGGCCC 1 cut(s) 1023
PspPI GGNCC 6 cut(s) 581, 816, 865, 935, 1023, 1024
PspPPI RGGWCCY 2 cut(s) 581, 816
PsuI RGATCY 2 cut(s) 743, 801
PvuII CAGCTG 1 cut(s) 147
RsaI GTAC 2 cut(s) 611, 755
RsaNI GTAC 2 cut(s) 610, 754
SacI GAGCTC 2 cut(s) 786, 813
SacII CCGCGG 1 cut(s) 241
SalI GTCGAC 1 cut(s) 568
SatI GCNGC 9 cut(s) 54, 148, 228, 241, 252, 600, 824, 858, 950
Sau3AI GATC 6 cut(s) 435, 743, 760, 765, 801, 1033
Sau96I GGNCC 6 cut(s) 581, 816, 865, 935, 1023, 1024
ScaI AGTACT 1 cut(s) 611
SchI GAGTC 3 cut(s) 396, 398, 521
ScrFI CCNGG 4 cut(s) 287, 524, 605, 933
SduI GDGCHC 7 cut(s) 174, 191, 423, 786, 813, 1007, 1027
SfaNI GCATC 3 cut(s) 786, 937, 1003
Sfr303I CCGCGG 1 cut(s) 241
SgrAI CRCCGGYG 1 cut(s) 710
SgrBI CCGCGG 1 cut(s) 241
SinI GGWCC 4 cut(s) 581, 816, 865, 935
Sse9I AATT 2 cut(s) 128, 380
SspMI CTAG 1 cut(s) 986
SstI GAGCTC 2 cut(s) 786, 813
StyD4I CCNGG 4 cut(s) 285, 522, 603, 931
TaiI ACGT 2 cut(s) 210, 434
TasI AATT 2 cut(s) 128, 380
TatI WGTACW 1 cut(s) 609
TauI GCSGC 5 cut(s) 56, 230, 243, 602, 826
TfiI GAWTC 1 cut(s) 111
TseFI GTSAC 1 cut(s) 58
TseI GCWGC 4 cut(s) 147, 251, 857, 949
Tsp45I GTSAC 1 cut(s) 58
TspDTI ATGAA 2 cut(s) 4, 13
TspGWI ACGGA 3 cut(s) 253, 773, 900
VpaK11BI GGWCC 4 cut(s) 581, 816, 865, 935
XapI RAATTY 2 cut(s) 128, 380
XceI RCATGY 1 cut(s) 504
XmiI GTMKAC 3 cut(s) 390, 519, 569
XspI CTAG 1 cut(s) 986
ZraI GACGTC 1 cut(s) 432
ZrmI AGTACT 1 cut(s) 611
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.