Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0006303

Physical Location & Seq

Genomic Coordinates Reverse (-)

23856877 .. 23860097

Gene Structure 3221 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1273700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2124 bp

ATGATTCTCCACATTCTCCACCAAAAGTCTCTGGCTTTCATCACCGTCGTCAGCGTCCTTACCCTTTCAACCTCCATAGCCGCCATAGCCAAAGCTCAAAACTCGAGCTCCTGCATACCCACATGCGGATCGGGAAAATCAGCCAAAACTGTTCGCTATCCATTTGGATTCTCACCGAGCTGCGCAATCCCATTGAACTGTTCTGACAAAAACGAGATCACACTCGGCAAATTCAGAGTCCAAAACGTCACCCCAAACGGCATCTTCGTCAACCTCCCTGCAAAATGCAACCGTCGGGTCGAATCCGTGGCCCGACTCTTCAGCTCGAACTTCAGCCCGACTTGGAACAACAGCCTTCTCCTCCAGAATTGCTCGGCGCCGCAAAACGGCTGCATCATTCCGGCCGATTTCGTTCGGAAGCAGTTCAATTTAGAGAGCTGCAGGTCCAGCGCCGATAACATCAGCTGCCTGTCGCAGCAGCACAATCAGTCGGAGGTTATACGAATTTCGGACTTGACTCGGACTGGGTGCAAGAACTTGTTCGGGTCGTTTGCGGTTCAGTCGGGTGGGGAGTGGCCTCTCTCGCTGGAGTTCGAGACGGTGGAGTTGGGATGGTGGGTCGAGGGGCCCTGCGACTGCGATGCGAATGCCACGTGTACTACGGTGAAGCTCGGCGATGGGATGCCGGAAGGGTACCGATGTAGATGCAATGATGGGTTCGACGGCGACGGGTTCAATCTCGGGTGGGGTTGCCGGAGAGTTTCCGAGTGCAGTCCATCAAAGTACATGTCTGGTCGCTGTGGGGGAACAACTAGAGTTGGTGCTCTTATTGGAGGGGTTATTGCTGGAGCTTTCTTAATGGCCGGTCTATTTGTTCTCTGTTACTTTGTTCGACGTCGTTCAACTTGCTTGAGAAACCGAATGAGCGCAAGGCGCCTCCTAAGCGAAGCGGCAGGCAACTCTAATGTTTCATTATTCCCCTATAAAGAAATAGCGAGAGCCACTAACTGCTTCGCTGAAAAACAAAGGCTGGGCACAGGGGCTTTTGGTACAGTTTATGCAGGAAAACTCCACAACGATGAGTGGGTTGCCATAAAGAAGATCAACCGTCGAGACACCAATGGCGTTGATCAAGTCATGAATGAGATCAAACTCCTTTCCTCTGTGAGCCACCCGAATCTGGTGCGCCTCTTAGGTTGCTGCATAGAGGGAGGTGAACAGATCCTCGTCTATGAATATATGCCTAATGGAACTCTATCTGAACATCTTCAACGAGAGAGGGGCCAAGGACTTCCGTGGACCATAAGGCTCACCATCGCCTCTGAAACTGCTAATGCTATAGCTTATCTCCATTCAGAAATGAATCCACCAATCTATCATAGAGATATCAAATCCACCAATATACTCCTGGATTACAACTACAAGTCAAAGGTAGCAGATTTTGGCCTTTCTAGACTTGGGATGACTGAATCGTCATACGTATCAACGGCTCCACAAGGGACTCCGGGCTACGTGGATCCTCAATACCATCAAAACTTCCACCTCTCCGATAGAAGTGATGTTTACAGCTTCGGGGTAGTATTAGTAGAGATTATAACCGCAATGAAGGTGGTTGATTTCGCTCGACCTCAGTCTGATGTCAACTTGGCTGCACTTGCAATCGATAGGATTGGGAAGGGAAGCTTGGACGAGATAGTTGATCCCTTTCTGGAGCCAAATAGGGACGCATGGACTCTATATTCTGTTAACAAGGTGGGTGAGCTTGCATTTCGATGCCTTGCTTTTCACAGTGACATGAGGCCTTCTATGACAGAGGTGGCAGAAGAACTGGAGTTTGTCCGGCGCAGCGGGTGGGCAACAATGAAGGAAAACATATGCATGGGATCATCAGTGGCGTCGTCTTGTTCATCACCGTATAATGGAAGTGAGAAGTCATTCGGAGGTGCGACGGCTAAGAAGGCCGGTATACGAAGCCAAAGATCAATAGTTTCACTGAGGGTAGATAGCTCTCTAGCTTCCATGGAAGAGGACAAGGATAGCTCTCCTGTTTCTGTACACGATCCTTGGTTAAGTGAACAGAGTTCACCTTCAACAAATAGCTTATTAGGCAATGTAGTAAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

708

Amino Acids

77.38

Weight (kDa)

8.18

Isoelectric Point (pI)

49.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	339 - 608	3.1e-44	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	341 - 610	7.1e-45	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006303)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G23450 AT2G23450 AT4G00955 AT4G00955
fragaria_vesca	FvH4_1g14540 FvH4_1g14540 FvH4_1g14540 FvH4_1g14540
malus_domestica	MD02G1159100.v1.1 MD15G1273700.v1.1
prunus_persica	Prupe.5G021600_v2.0.a1 Prupe.7G145100_v2.0.a1 Prupe.7G145100_v2.0.a1 Prupe.7G145100_v2.0.a1
pyrus_communis	pycom02g12520 pycom15g23660
rosa_chinensis	RchiOBHm_Chr2g0103291
rosa_laevigata	RLG00000017220
rosa_multiflora	Rmu_sc0006743.1_g000008
rosa_roxburghii	Rroxscaffold_2G00139770
rosa_rugosa	Rorug02G0113100
rosa_samantha	Rh2AG161900 Rh2BG168800 Rh2CG168800 Rh2DG167700
rosa_wichuraiana	Rw0G019380 Rw2G012700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1595
AasI	GACNNNNNNGTC	1 cut(s)	1471
AatII	GACGTC	1 cut(s)	898
Acc16I	TGCGCA	1 cut(s)	184
Acc36I	ACCTGC	1 cut(s)	432
Acc65I	GGTACC	1 cut(s)	693
AccB1I	GGYRCC	3 cut(s)	376, 693, 933
AccI	GTMKAC	1 cut(s)	1966
AciI	CCGC	7 cut(s)	81, 126, 380, 554, 950, 1599, 1848
AclWI	GGATC	7 cut(s)	136, 1216, 1511, 1524, 1694, 1891, 2054
AcoI	YGGCCR	2 cut(s)	402, 861
AcsI	RAATTY	2 cut(s)	230, 504
AcuI	CTGAAG	2 cut(s)	304, 316
AcvI	CACGTG	1 cut(s)	654
AcyI	GRCGYC	4 cut(s)	377, 895, 934, 1895
AfaI	GTAC	5 cut(s)	658, 695, 785, 1051, 2055
AfiI	CCNNNNNNNGG	4 cut(s)	125, 386, 1180, 1919
AflIII	ACRYGT	2 cut(s)	653, 786
AgsI	TTSAA	7 cut(s)	69, 196, 427, 736, 903, 1271, 2091
AjnI	CCWGG	1 cut(s)	1407
AjuI	GAANNNNNNNTTGG	2 cut(s)	1667, 1699
Alw21I	GWGCWC	2 cut(s)	110, 826
Alw26I	GTCTC	3 cut(s)	33, 590, 1107
AlwI	GGATC	7 cut(s)	136, 1216, 1511, 1524, 1694, 1891, 2054
Ama87I	CYCGRG	2 cut(s)	103, 740
AoxI	GGCC	9 cut(s)	309, 402, 575, 626, 861, 1282, 1444, 1799, 1959
ApaI	GGGCCC	1 cut(s)	630
ApeKI	GCWGC	9 cut(s)	180, 390, 438, 465, 475, 478, 1200, 1649, 1845
ApoI	RAATTY	2 cut(s)	230, 504
ArsI	GACNNNNNNTTYG	4 cut(s)	222, 254, 773, 805
Asp700I	GAANNNNTTC	4 cut(s)	422, 539, 1266, 1934
Asp718I	GGTACC	1 cut(s)	693
AspLEI	GCGC	7 cut(s)	185, 379, 452, 929, 936, 1188, 1845
AspS9I	GGNCC	6 cut(s)	310, 444, 626, 627, 1282, 1299
AsuC2I	CCSGG	1 cut(s)	1506
AsuHPI	GGTGA	9 cut(s)	34, 165, 241, 676, 1226, 1303, 1769, 1902, 2076
AvaI	CYCGRG	2 cut(s)	103, 740
AvaII	GGWCC	2 cut(s)	444, 1299
BaeGI	GKGCMC	2 cut(s)	630, 1037
BaeI	ACNNNNGTAYC	2 cut(s)	685, 718
BamHI	GGATCC	1 cut(s)	1516
BanI	GGYRCC	3 cut(s)	376, 693, 933
BanII	GRGCYC	2 cut(s)	110, 630
BbrPI	CACGTG	1 cut(s)	654
Bbv12I	GWGCWC	2 cut(s)	110, 826
BbvI	GCAGC	9 cut(s)	167, 377, 425, 452, 487, 490, 1187, 1636, 1857
BccI	CCATC	6 cut(s)	606, 671, 707, 784, 1322, 1536
BceAI	ACGGC	5 cut(s)	274, 403, 739, 1503, 1965
BcgI	CGANNNNNNTGC	8 cut(s)	623, 629, 657, 663, 687, 721, 1165, 1199
BciT130I	CCWGG	1 cut(s)	1409
BclI	TGATCA	1 cut(s)	1129
BcnI	CCSGG	1 cut(s)	1506
BcoDI	GTCTC	3 cut(s)	33, 590, 1107
BfaI	CTAG	3 cut(s)	813, 1452, 2012
BfmI	CTRYAG	2 cut(s)	439, 1338
BfoI	RGCGCY	3 cut(s)	380, 453, 937
BfuAI	ACCTGC	1 cut(s)	432
Bme1390I	CCNGG	2 cut(s)	1409, 1506
Bme18I	GGWCC	2 cut(s)	444, 1299
BmeT110I	CYCGRG	2 cut(s)	103, 740
BmgT120I	GGNCC	6 cut(s)	310, 444, 626, 627, 1282, 1299
BmiI	GGNNCC	9 cut(s)	378, 627, 628, 695, 935, 1283, 1491, 1518, 1713
BmrFI	CCNGG	2 cut(s)	1409, 1506
BmrI	ACTGGG	1 cut(s)	534
BmsI	GCATC	6 cut(s)	270, 402, 631, 672, 695, 1763
BmuI	ACTGGG	1 cut(s)	534
BoxI	GACNNNNGTC	1 cut(s)	1630
BpmI	CTGGAG	5 cut(s)	347, 608, 867, 1730, 1850
Bpu10I	CCTNAGC	1 cut(s)	941
BpuEI	CTTGAG	1 cut(s)	931
BpuMI	CCSGG	1 cut(s)	1506
Bsa29I	ATCGAT	1 cut(s)	1662
BsaAI	YACGTR	3 cut(s)	654, 1480, 1513
BsaHI	GRCGYC	4 cut(s)	377, 895, 934, 1895
BsaJI	CCNNGG	5 cut(s)	306, 1285, 1295, 2019, 2063
BsaXI	ACNNNNNCTCC	2 cut(s)	92, 122
Bsc4I	CCNNNNNNNGG	4 cut(s)	125, 386, 1180, 1919
Bse118I	RCCGGY	2 cut(s)	863, 1961
Bse1I	ACTGG	2 cut(s)	529, 1833
Bse3DI	GCAATG	3 cut(s)	715, 1608, 2116
BseBI	CCWGG	1 cut(s)	1409
BseCI	ATCGAT	1 cut(s)	1662
BseDI	CCNNGG	5 cut(s)	306, 1285, 1295, 2019, 2063
BseGI	GGATG	3 cut(s)	617, 687, 1467
BseLI	CCNNNNNNNGG	4 cut(s)	125, 386, 1180, 1919
BseMI	GCAATG	3 cut(s)	715, 1608, 2116
BseMII	CTCAG	2 cut(s)	1643, 1985
BseNI	ACTGG	2 cut(s)	529, 1833
BseRI	GAGGAG	1 cut(s)	350
BseSI	GKGCMC	2 cut(s)	630, 1037
BseX3I	CGGCCG	1 cut(s)	402
BseXI	GCAGC	9 cut(s)	167, 377, 425, 452, 487, 490, 1187, 1636, 1857
BseYI	CCCAGC	1 cut(s)	1030
BsgI	GTGCAG	2 cut(s)	790, 1635
Bsh1285I	CGRYCG	1 cut(s)	405
BshFI	GGCC	9 cut(s)	311, 404, 577, 628, 863, 1284, 1446, 1801, 1961
BshNI	GGYRCC	3 cut(s)	376, 693, 933
BshVI	ATCGAT	1 cut(s)	1662
BsiEI	CGRYCG	1 cut(s)	405
BsiHKAI	GWGCWC	2 cut(s)	110, 826
BsiHKCI	CYCGRG	2 cut(s)	103, 740
BsiSI	CCGG	7 cut(s)	401, 686, 754, 864, 1505, 1840, 1962
BslFI	GGGAC	2 cut(s)	1513, 1736
BslI	CCNNNNNNNGG	4 cut(s)	125, 386, 1180, 1919
BsmAI	GTCTC	3 cut(s)	33, 590, 1107
BsmBI	CGTCTC	1 cut(s)	590
BsmFI	GGGAC	2 cut(s)	1513, 1736
BsmI	GAATGC	1 cut(s)	652
BsnI	GGCC	9 cut(s)	311, 404, 577, 628, 863, 1284, 1446, 1801, 1961
BsoBI	CYCGRG	2 cut(s)	103, 740
Bsp120I	GGGCCC	1 cut(s)	626
Bsp1286I	GDGCHC	4 cut(s)	110, 630, 826, 1037
Bsp1407I	TGTACA	1 cut(s)	2053
Bsp19I	CCATGG	1 cut(s)	2019
BspACI	CCGC	7 cut(s)	81, 126, 380, 554, 950, 1599, 1848
BspANI	GGCC	9 cut(s)	311, 404, 577, 628, 863, 1284, 1446, 1801, 1961
BspCNI	CTCAG	2 cut(s)	1642, 1986
BspDI	ATCGAT	1 cut(s)	1662
BspHI	TCATGA	1 cut(s)	1137
BspLI	GGNNCC	9 cut(s)	378, 627, 628, 695, 935, 1283, 1491, 1518, 1713
BspMAI	CTGCAG	1 cut(s)	443
BspMI	ACCTGC	1 cut(s)	432
BspPI	GGATC	7 cut(s)	136, 1216, 1511, 1524, 1694, 1891, 2054
BspT107I	GGYRCC	3 cut(s)	376, 693, 933
BsrDI	GCAATG	3 cut(s)	715, 1608, 2116
BsrFI	RCCGGY	2 cut(s)	863, 1961
BsrGI	TGTACA	1 cut(s)	2053
BsrI	ACTGG	2 cut(s)	529, 1833
BssAI	RCCGGY	2 cut(s)	863, 1961
BssECI	CCNNGG	5 cut(s)	306, 1285, 1295, 2019, 2063
BssNAI	GTATAC	1 cut(s)	1967
BssNI	GRCGYC	4 cut(s)	377, 895, 934, 1895
BssT1I	CCWWGG	3 cut(s)	1285, 2019, 2063
Bst1107I	GTATAC	1 cut(s)	1967
Bst2UI	CCWGG	1 cut(s)	1409
Bst6I	CTCTTC	2 cut(s)	323, 2019
BstACI	GRCGYC	4 cut(s)	377, 895, 934, 1895
BstAUI	TGTACA	1 cut(s)	2053
BstBAI	YACGTR	3 cut(s)	654, 1480, 1513
BstC8I	GCNNGC	2 cut(s)	955, 1764
BstDEI	CTNAG	5 cut(s)	941, 1192, 1629, 1953, 1994
BstDSI	CCRYGG	3 cut(s)	306, 1295, 2019
BstF5I	GGATG	3 cut(s)	617, 687, 1467
BstH2I	RGCGCY	3 cut(s)	380, 453, 937
BstHHI	GCGC	7 cut(s)	185, 379, 452, 929, 936, 1188, 1845
BstMAI	GTCTC	3 cut(s)	33, 590, 1107
BstMCI	CGRYCG	1 cut(s)	405
BstMWI	GCNNNNNNNGC	8 cut(s)	86, 447, 583, 933, 942, 1655, 1958, 2106
BstNI	CCWGG	1 cut(s)	1409
BstNSI	RCATGY	2 cut(s)	126, 790
BstPAI	GACNNNNGTC	1 cut(s)	1630
BstSCI	CCNGG	2 cut(s)	1407, 1504
BstSFI	CTRYAG	2 cut(s)	439, 1338
BstSLI	GKGCMC	2 cut(s)	630, 1037
BstSNI	TACGTA	1 cut(s)	1480
BstV1I	GCAGC	9 cut(s)	167, 377, 425, 452, 487, 490, 1187, 1636, 1857
BstX2I	RGATCY	2 cut(s)	1221, 1516
BstYI	RGATCY	2 cut(s)	1221, 1516
BstZ17I	GTATAC	1 cut(s)	1967
BstZI	CGGCCG	1 cut(s)	402
Bsu15I	ATCGAT	1 cut(s)	1662
BsuRI	GGCC	9 cut(s)	311, 404, 577, 628, 863, 1284, 1446, 1801, 1961
BsuTUI	ATCGAT	1 cut(s)	1662
BtgI	CCRYGG	3 cut(s)	306, 1295, 2019
BtgZI	GCGATG	3 cut(s)	654, 690, 1300
BtsCI	GGATG	3 cut(s)	617, 687, 1467
BtsIMutI	CAGTG	3 cut(s)	1795, 1896, 1991
BveI	ACCTGC	1 cut(s)	432
Cac8I	GCNNGC	2 cut(s)	955, 1764
CciI	TCATGA	1 cut(s)	1137
CfoI	GCGC	7 cut(s)	185, 379, 452, 929, 936, 1188, 1845
Cfr10I	RCCGGY	2 cut(s)	863, 1961
Cfr13I	GGNCC	6 cut(s)	310, 444, 626, 627, 1282, 1299
ClaI	ATCGAT	1 cut(s)	1662
CseI	GACGC	3 cut(s)	43, 1733, 1884
Csp6I	GTAC	5 cut(s)	657, 694, 784, 1050, 2054
CspCI	CAANNNNNGTGG	2 cut(s)	1590, 1625
CviAII	CATG	7 cut(s)	123, 787, 1138, 1728, 1795, 1879, 2020
CviQI	GTAC	5 cut(s)	657, 694, 784, 1050, 2054
DdeI	CTNAG	5 cut(s)	941, 1192, 1629, 1953, 1994
DinI	GGCGCC	2 cut(s)	378, 935
DrdI	GACNNNNNNGTC	1 cut(s)	1471
DseDI	GACNNNNNNGTC	1 cut(s)	1471
EaeI	YGGCCR	2 cut(s)	402, 861
EagI	CGGCCG	1 cut(s)	402
Eam1104I	CTCTTC	2 cut(s)	323, 2019
EarI	CTCTTC	2 cut(s)	323, 2019
Ecl136II	GAGCTC	1 cut(s)	108
EclXI	CGGCCG	1 cut(s)	402
Eco105I	TACGTA	1 cut(s)	1480
Eco130I	CCWWGG	3 cut(s)	1285, 2019, 2063
Eco147I	AGGCCT	1 cut(s)	1801
Eco24I	GRGCYC	2 cut(s)	110, 630
Eco32I	GATATC	1 cut(s)	1387
Eco47I	GGWCC	2 cut(s)	444, 1299
Eco52I	CGGCCG	1 cut(s)	402
Eco53kI	GAGCTC	1 cut(s)	108
Eco57I	CTGAAG	2 cut(s)	304, 316
Eco72I	CACGTG	1 cut(s)	654
Eco88I	CYCGRG	2 cut(s)	103, 740
EcoICRI	GAGCTC	1 cut(s)	108
EcoO109I	RGGNCCY	2 cut(s)	626, 627
EcoRII	CCWGG	1 cut(s)	1407
EcoRV	GATATC	1 cut(s)	1387
EcoT14I	CCWWGG	3 cut(s)	1285, 2019, 2063
EcoT22I	ATGCAT	1 cut(s)	1880
EcoT38I	GRGCYC	2 cut(s)	110, 630
EgeI	GGCGCC	2 cut(s)	378, 935
EheI	GGCGCC	2 cut(s)	378, 935
ErhI	CCWWGG	3 cut(s)	1285, 2019, 2063
Esp3I	CGTCTC	1 cut(s)	590
FaeI	CATG	7 cut(s)	126, 790, 1141, 1731, 1798, 1882, 2023
FalI	AAGNNNNNCTT	2 cut(s)	1667, 1699
FaqI	GGGAC	2 cut(s)	1513, 1736
FatI	CATG	7 cut(s)	122, 786, 1137, 1727, 1794, 1878, 2019
FauI	CCCGC	1 cut(s)	1841
FauNDI	CATATG	1 cut(s)	1874
FbaI	TGATCA	1 cut(s)	1129
FblI	GTMKAC	1 cut(s)	1966
FokI	GGATG	3 cut(s)	624, 694, 1474
FriOI	GRGCYC	2 cut(s)	110, 630
FspBI	CTAG	3 cut(s)	813, 1452, 2012
FspI	TGCGCA	1 cut(s)	184
GlaI	GCGC	7 cut(s)	184, 378, 451, 928, 935, 1187, 1844
GsaI	CCCAGC	1 cut(s)	1034
GsuI	CTGGAG	5 cut(s)	347, 608, 867, 1730, 1850
HaeII	RGCGCY	3 cut(s)	380, 453, 937
HaeIII	GGCC	9 cut(s)	311, 404, 577, 628, 863, 1284, 1446, 1801, 1961
HapII	CCGG	7 cut(s)	401, 686, 754, 864, 1505, 1840, 1962
HgaI	GACGC	3 cut(s)	43, 1733, 1884
HhaI	GCGC	7 cut(s)	185, 379, 452, 929, 936, 1188, 1845
Hin1I	GRCGYC	4 cut(s)	377, 895, 934, 1895
Hin1II	CATG	7 cut(s)	126, 790, 1141, 1731, 1798, 1882, 2023
Hin6I	GCGC	7 cut(s)	183, 377, 450, 927, 934, 1186, 1843
HinP1I	GCGC	7 cut(s)	183, 377, 450, 927, 934, 1186, 1843
HincII	GTYRAC	3 cut(s)	271, 1642, 1747
HindII	GTYRAC	3 cut(s)	271, 1642, 1747
HindIII	AAGCTT	1 cut(s)	1681
HpaI	GTTAAC	1 cut(s)	1747
HpaII	CCGG	7 cut(s)	401, 686, 754, 864, 1505, 1840, 1962
HphI	GGTGA	9 cut(s)	34, 165, 241, 676, 1226, 1303, 1769, 1902, 2076
Hpy188III	TCNNGA	7 cut(s)	132, 364, 595, 1112, 1138, 1452, 1709
Hpy99I	CGWCG	9 cut(s)	50, 297, 725, 731, 897, 900, 1113, 1900, 1951
HpyAV	CCTTC	8 cut(s)	365, 683, 1600, 1669, 1812, 1858, 1951, 2097
HpyCH4IV	ACGT	5 cut(s)	246, 653, 895, 1479, 1512
HpyF10VI	GCNNNNNNNGC	8 cut(s)	86, 447, 583, 933, 942, 1655, 1958, 2106
HpyF3I	CTNAG	5 cut(s)	941, 1192, 1629, 1953, 1994
HpySE526I	ACGT	5 cut(s)	246, 653, 895, 1479, 1512
Hsp92I	GRCGYC	4 cut(s)	377, 895, 934, 1895
Hsp92II	CATG	7 cut(s)	126, 790, 1141, 1731, 1798, 1882, 2023
HspAI	GCGC	7 cut(s)	183, 377, 450, 927, 934, 1186, 1843
KasI	GGCGCC	2 cut(s)	376, 933
KpnI	GGTACC	1 cut(s)	697
Ksp22I	TGATCA	1 cut(s)	1129
KspAI	GTTAAC	1 cut(s)	1747
LmnI	GCTCC	4 cut(s)	113, 848, 1495, 1711
Lsp1109I	GCAGC	9 cut(s)	167, 377, 425, 452, 487, 490, 1187, 1636, 1857
LweI	GCATC	6 cut(s)	270, 402, 631, 672, 695, 1763
MaeI	CTAG	3 cut(s)	813, 1452, 2012
MaeII	ACGT	5 cut(s)	246, 653, 895, 1479, 1512
MaeIII	GTNAC	3 cut(s)	247, 881, 1790
MboII	GAAGA	6 cut(s)	256, 310, 1111, 1259, 1835, 2036
MflI	RGATCY	2 cut(s)	1221, 1516
MhlI	GDGCHC	4 cut(s)	110, 630, 826, 1037
MluCI	AATT	4 cut(s)	230, 367, 427, 504
Mly113I	GGCGCC	2 cut(s)	377, 934
MlyI	GAGTC	5 cut(s)	246, 309, 511, 1495, 1726
MmeI	TCCRAC	1 cut(s)	471
Mph1103I	ATGCAT	1 cut(s)	1880
MroXI	GAANNNNTTC	4 cut(s)	422, 539, 1266, 1934
MseI	TTAA	3 cut(s)	857, 1746, 2069
MslI	CAYNNNNRTG	3 cut(s)	1077, 1771, 1877
MspA1I	CMGCKG	2 cut(s)	465, 1848
MspI	CCGG	7 cut(s)	401, 686, 754, 864, 1505, 1840, 1962
MspR9I	CCNGG	2 cut(s)	1409, 1506
Mva1269I	GAATGC	1 cut(s)	652
MvaI	CCWGG	1 cut(s)	1409
MwoI	GCNNNNNNNGC	8 cut(s)	86, 447, 583, 933, 942, 1655, 1958, 2106
NarI	GGCGCC	2 cut(s)	377, 934
NciI	CCSGG	1 cut(s)	1506
NcoI	CCATGG	1 cut(s)	2019
NdeI	CATATG	1 cut(s)	1874
NlaIII	CATG	7 cut(s)	126, 790, 1141, 1731, 1798, 1882, 2023
NlaIV	GGNNCC	9 cut(s)	378, 627, 628, 695, 935, 1283, 1491, 1518, 1713
NmeAIII	GCCGAG	3 cut(s)	204, 353, 651
NmuCI	GTSAC	2 cut(s)	247, 1790
NsbI	TGCGCA	1 cut(s)	184
NsiI	ATGCAT	1 cut(s)	1880
NspI	RCATGY	2 cut(s)	126, 790
PaeR7I	CTCGAG	1 cut(s)	103
PagI	TCATGA	1 cut(s)	1137
PceI	AGGCCT	1 cut(s)	1801
PciI	ACATGT	1 cut(s)	786
PcsI	WCGNNNNNNNCGW	1 cut(s)	264
PctI	GAATGC	1 cut(s)	652
PdmI	GAANNNNTTC	4 cut(s)	422, 539, 1266, 1934
PfeI	GAWTC	6 cut(s)	4, 168, 302, 1177, 1363, 1469
PfoI	TCCNGGA	1 cut(s)	1407
PleI	GAGTC	5 cut(s)	245, 309, 511, 1495, 1726
PluTI	GGCGCC	2 cut(s)	380, 937
PmaCI	CACGTG	1 cut(s)	654
PmlI	CACGTG	1 cut(s)	654
PpsI	GAGTC	5 cut(s)	245, 309, 511, 1495, 1726
Ppu21I	YACGTR	3 cut(s)	654, 1480, 1513
PscI	ACATGT	1 cut(s)	786
PshAI	GACNNNNGTC	1 cut(s)	1630
PsiI	TTATAA	1 cut(s)	1595
Psp124BI	GAGCTC	1 cut(s)	110
Psp6I	CCWGG	1 cut(s)	1407
PspCI	CACGTG	1 cut(s)	654
PspFI	CCCAGC	1 cut(s)	1030
PspGI	CCWGG	1 cut(s)	1407
PspN4I	GGNNCC	9 cut(s)	378, 627, 628, 695, 935, 1283, 1491, 1518, 1713
PspOMI	GGGCCC	1 cut(s)	626
PspPI	GGNCC	6 cut(s)	310, 444, 626, 627, 1282, 1299
PspXI	VCTCGAGB	1 cut(s)	103
PstI	CTGCAG	1 cut(s)	443
PsuI	RGATCY	2 cut(s)	1221, 1516
PvuII	CAGCTG	1 cut(s)	465
RsaI	GTAC	5 cut(s)	658, 695, 785, 1051, 2055
RsaNI	GTAC	5 cut(s)	657, 694, 784, 1050, 2054
RseI	CAYNNNNRTG	3 cut(s)	1077, 1771, 1877
SacI	GAGCTC	1 cut(s)	110
SaqAI	TTAA	3 cut(s)	857, 1746, 2069
Sau96I	GGNCC	6 cut(s)	310, 444, 626, 627, 1282, 1299
SchI	GAGTC	5 cut(s)	246, 309, 511, 1495, 1726
ScrFI	CCNGG	2 cut(s)	1409, 1506
SduI	GDGCHC	4 cut(s)	110, 630, 826, 1037
SfaNI	GCATC	6 cut(s)	270, 402, 631, 672, 695, 1763
SfcI	CTRYAG	2 cut(s)	439, 1338
SfoI	GGCGCC	2 cut(s)	378, 935
Sfr274I	CTCGAG	1 cut(s)	103
SinI	GGWCC	2 cut(s)	444, 1299
SlaI	CTCGAG	1 cut(s)	103
SmiMI	CAYNNNNRTG	3 cut(s)	1077, 1771, 1877
SmlI	CTYRAG	2 cut(s)	103, 910
SmoI	CTYRAG	2 cut(s)	103, 910
SnaBI	TACGTA	1 cut(s)	1480
Sse9I	AATT	4 cut(s)	230, 367, 427, 504
SseBI	AGGCCT	1 cut(s)	1801
SsiI	CCGC	7 cut(s)	81, 126, 380, 554, 950, 1599, 1848
SspDI	GGCGCC	2 cut(s)	376, 933
SspMI	CTAG	3 cut(s)	813, 1452, 2012
SstI	GAGCTC	1 cut(s)	110
StuI	AGGCCT	1 cut(s)	1801
StyD4I	CCNGG	2 cut(s)	1407, 1504
StyI	CCWWGG	3 cut(s)	1285, 2019, 2063
TaiI	ACGT	5 cut(s)	249, 656, 898, 1482, 1515
TasI	AATT	4 cut(s)	230, 367, 427, 504
TatI	WGTACW	3 cut(s)	656, 783, 2053
TauI	GCSGC	3 cut(s)	83, 382, 953
TfiI	GAWTC	6 cut(s)	4, 168, 302, 1177, 1363, 1469
Tru1I	TTAA	3 cut(s)	857, 1746, 2069
Tru9I	TTAA	3 cut(s)	857, 1746, 2069
TscAI	CASTG	3 cut(s)	1795, 1896, 1998
TseFI	GTSAC	2 cut(s)	247, 1790
TseI	GCWGC	9 cut(s)	180, 390, 438, 465, 475, 478, 1200, 1649, 1845
Tsp45I	GTSAC	2 cut(s)	247, 1790
TspDTI	ATGAA	8 cut(s)	28, 960, 1154, 1248, 1376, 1619, 1877, 1896
TspGWI	ACGGA	2 cut(s)	295, 1284
TspRI	CASTG	3 cut(s)	1795, 1896, 1998
VpaK11BI	GGWCC	2 cut(s)	444, 1299
XapI	RAATTY	2 cut(s)	230, 504
XbaI	TCTAGA	1 cut(s)	1451
XceI	RCATGY	2 cut(s)	126, 790
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1405
XhoI	CTCGAG	1 cut(s)	103
XmiI	GTMKAC	1 cut(s)	1966
XmnI	GAANNNNTTC	4 cut(s)	422, 539, 1266, 1934
XspI	CTAG	3 cut(s)	813, 1452, 2012
ZraI	GACGTC	1 cut(s)	896
Zsp2I	ATGCAT	1 cut(s)	1880

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.