Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00868

Orthogroup ID

OG0006303

Physical Location & Seq

Genomic Coordinates Reverse (-)

2987 .. 6863

Gene Structure 3877 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G019380.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2085 bp

ATGAATCATTTCCTCAGCAAAAACCTTGTGATTCTGCTCCTCATAGCCTCCGTATCCAAAGCCCAGAAGCAGAACTGCACAACCACATGCGGATCCGGAAAGTCTGCCAAGCCGGTTCCGTACCCGTTCGGGTTCTCAGACGGGTGCAAAATCCGATTGAACTGCTCTAACAGCATCATCTCGATCAGCAATTTCACAGTCCAGAACATAACCTCAACCAGCATCTTCCTCGATCTCCGGGCAAAATGTCACAGACGGGTCAAATCTATAGAGCCCCTTTTCGGCCCAAACTTCGGCCCAACTTGGAACAACAGCTTGCTTCTCCAGAGCTGCCCACTCCCCCAAAACGGCTGCTACATTCCGGCGGATTTAGTTGAAAAGCAGTTTGGTTTGGACGACTGTAGAGCCAACAGCGATAACATAAGCTGTTTTGTTCACGAGAATAATCGGTCGGAGATTATGGAATATAGTGACCTAAATAGGACCAACTGTACGTTCTTGTTTGGATCCATTGCGGTTAATTCCAGTAAGAACTCGACGCTGTCGCTCCAGTTTGAGACGATCGAGTTGGGCTGGTGGGTTACGCCCTCCCCCGGTGATTGCGCTGACAATGCCACGCGGACGGAAGTTAAGCTCGGCGGGGGGAAAGCTACGGGGATCCGCTGCCGATGTGAGGAAGGATATCACGGCGACGGGTTCAGAAACGGGACGGGTTGCCGGAGAGTTTCTGACTGCAATCCAAGGTACATATCTGGAAGTTGTGGGGGAATAACTAGAGTTGGTGTTCTTATTGCAGGGTTTATTGCTGGAGCTTTATTAATGGCTGGTCTATTTCTTATCTGCTACTATCTTCGTAAGCGTTCCACTTGCTTAAAAAACCAGCTGAGTGCAAGGCGCCTTCTATCTGAAGCTGCAGGCAACTCCAGTGTTCCATTATATCCCTTTAAAGAAATAGAGAGAGCTACTAATTGCTTTGCCGAGAAACAAAGGTTGGGTACAGGGGCCTTTGGTACAGTTTATGCAGGAAAACTCCACAATGATGAATGGGTTGCGATAAAAAAGATTAAATACCGAGACTCTAACAGCATTGACCAAGTCATGAATGAGATCAAGCTCCTCTCCTCCGTGAGCCACCCGAATCTAGTACGACTCTTAGGTTGCTGCATAGAGGGAGGCGAACAGATACTTGTATATGAATATATGCCTAATGGAACGCTATCTCAACATCTACAAAGAGAGAGGGGAGAAGGACTTCCATGGACCATAAGGCTCACAATTGCTTCTGAAACTGCCAATGCTATAGCCTATCTCCACTCTGAGATGAATCCACCAATCTATCATAGAGATATCAAATCCAGCAACATACTTTTGGACTTCAACTACAAATCAAAGGTAGCAGATTTCGGTCTTTCTAGACTTGGAATGACAGAATTGTCATGCATATCAACAGCTCCACAAGGGACTCCAGGCTATGTAGATCCTCAGTACCATCAAAACTTCCATCTTTCTGATAGAAGTGATGTTTACAGCTTCGGGGTAGTTTTAGTAGAGATAATAACCGCAATGAAGGTGGTTGATTTTGCTAGACCTCAAACCGAGATCAATTTGGCTGCACTTGCTATTGATAGAATAGGGAAAGGATGCTTGGATGAAATAGTTGATCCTTTTCTCGAACCAAATAGGGATGCTTGGACTCTTTACTCCGTTAACAAGGTAGCCGAGCTTGCATTCAGATGCCTTGCGTTTCACAGTGACATGAGGCCTTCTATGAGAGAAGTTGCGGAAGAACTAGAATATGTCAGGCGCAGTGGGTGGGCAACGATGGAGGAGAATGTAGGCACAGCATCATCAGTGGCATCCTCTTGTTCATCACCATATAACGGAAGTGAGAAGTCATTGGGTGGTCTGACTGCTAAGAAGACCAGTATAAGAAGCCAGAGATCAATCGTTTCACTAAGGGTGGACAGTTCCCTAGCTCCGATGAAGGAGGAGAAGGATACCTCTCCTGTTTCTGTACATGATCCTTGGTTAAGTGACCAGAGTTCACCTTCAACAAACAGCTTATTGGGTAATGTAGTTCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

694

Amino Acids

76.41

Weight (kDa)

8.06

Isoelectric Point (pI)

43.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	326 - 595	8e-44	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	328 - 597	1.8e-43	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006303)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G23450 AT2G23450 AT4G00955 AT4G00955
fragaria_vesca	FvH4_1g14540 FvH4_1g14540 FvH4_1g14540 FvH4_1g14540
malus_domestica	MD02G1159100.v1.1 MD15G1273700.v1.1
prunus_persica	Prupe.5G021600_v2.0.a1 Prupe.7G145100_v2.0.a1 Prupe.7G145100_v2.0.a1 Prupe.7G145100_v2.0.a1
pyrus_communis	pycom02g12520 pycom15g23660
rosa_chinensis	RchiOBHm_Chr2g0103291
rosa_laevigata	RLG00000017220
rosa_multiflora	Rmu_sc0006743.1_g000008
rosa_roxburghii	Rroxscaffold_2G00139770
rosa_rugosa	Rorug02G0113100
rosa_samantha	Rh2AG161900 Rh2BG168800 Rh2CG168800 Rh2DG167700
rosa_wichuraiana	Rw0G019380 Rw2G012700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1432
AccB1I	GGYRCC	1 cut(s)	894
AccII	CGCG	1 cut(s)	619
AccIII	TCCGGA	1 cut(s)	95
AciI	CCGC	8 cut(s)	90, 365, 515, 619, 639, 661, 1560, 1781
AclWI	GGATC	9 cut(s)	87, 100, 501, 514, 652, 665, 1472, 1655, 2015
AcuI	CTGAAG	1 cut(s)	927
AcyI	GRCGYC	1 cut(s)	895
AfaI	GTAC	8 cut(s)	122, 493, 746, 997, 1012, 1146, 1487, 2016
AfiI	CCNNNNNNNGG	6 cut(s)	281, 293, 347, 593, 673, 1880
AgsI	TTSAA	4 cut(s)	160, 377, 1378, 2052
AjnI	CCWGG	1 cut(s)	1465
AjuI	GAANNNNNNNTTGG	8 cut(s)	369, 401, 479, 511, 974, 1006, 1628, 1660
Alw26I	GTCTC	2 cut(s)	551, 1068
AlwI	GGATC	9 cut(s)	87, 100, 501, 514, 652, 665, 1472, 1655, 2015
Aor13HI	TCCGGA	1 cut(s)	95
AoxI	GGCC	4 cut(s)	283, 295, 1002, 1760
ApeKI	GCWGC	6 cut(s)	330, 351, 663, 911, 1161, 1610
AseI	ATTAAT	1 cut(s)	818
Asp700I	GAANNNNTTC	2 cut(s)	8, 1251
AspLEI	GCGC	3 cut(s)	605, 897, 1806
AspS9I	GGNCC	5 cut(s)	284, 296, 483, 1002, 1260
AsuC2I	CCSGG	2 cut(s)	239, 594
AsuHPI	GGTGA	3 cut(s)	608, 1863, 2037
AvaII	GGWCC	2 cut(s)	483, 1260
BamHI	GGATCC	3 cut(s)	92, 506, 657
BanI	GGYRCC	1 cut(s)	894
BanII	GRGCYC	1 cut(s)	276
BauI	CACGAG	1 cut(s)	437
BbsI	GAAGAC	1 cut(s)	1925
BbvCI	CCTCAGC	1 cut(s)	14
BbvI	GCAGC	6 cut(s)	317, 338, 650, 898, 1148, 1597
BccI	CCATC	3 cut(s)	1497, 1509, 1816
BceAI	ACGGC	2 cut(s)	364, 703
BcgI	CGANNNNNNTGC	4 cut(s)	144, 178, 211, 245
BciT130I	CCWGG	1 cut(s)	1467
BciVI	GTATCC	2 cut(s)	64, 1990
BcnI	CCSGG	2 cut(s)	239, 594
BcoDI	GTCTC	2 cut(s)	551, 1068
BfaI	CTAG	6 cut(s)	774, 1142, 1413, 1584, 1790, 1973
BfmI	CTRYAG	4 cut(s)	267, 400, 912, 1299
BfoI	RGCGCY	1 cut(s)	898
BfuI	GTATCC	2 cut(s)	64, 1990
BisI	GCNGC	6 cut(s)	331, 352, 664, 912, 1162, 1611
BlsI	GCNGC	6 cut(s)	332, 353, 665, 913, 1163, 1612
Bme1390I	CCNGG	3 cut(s)	239, 594, 1467
Bme18I	GGWCC	2 cut(s)	483, 1260
BmgT120I	GGNCC	5 cut(s)	284, 296, 483, 1002, 1260
BmiI	GGNNCC	6 cut(s)	94, 117, 508, 659, 896, 1003
BmrFI	CCNGG	3 cut(s)	239, 594, 1467
BmsI	GCATC	7 cut(s)	183, 231, 1631, 1675, 1724, 1853, 1865
BpiI	GAAGAC	1 cut(s)	1925
BpmI	CTGGAG	5 cut(s)	308, 533, 828, 907, 1449
Bpu10I	CCTNAGC	1 cut(s)	14
BpuMI	CCSGG	2 cut(s)	239, 594
BsaHI	GRCGYC	1 cut(s)	895
BsaJI	CCNNGG	4 cut(s)	592, 740, 1256, 2024
BsaWI	WCCGGW	1 cut(s)	95
Bsc4I	CCNNNNNNNGG	6 cut(s)	281, 293, 347, 593, 673, 1880
Bse118I	RCCGGY	1 cut(s)	112
Bse1I	ACTGG	4 cut(s)	525, 550, 924, 1923
Bse3DI	GCAATG	2 cut(s)	510, 1569
BseAI	TCCGGA	1 cut(s)	95
BseBI	CCWGG	1 cut(s)	1467
BseDI	CCNNGG	4 cut(s)	592, 740, 1256, 2024
BseGI	GGATG	4 cut(s)	1646, 1654, 1690, 1856
BseLI	CCNNNNNNNGG	6 cut(s)	281, 293, 347, 593, 673, 1880
BseMI	GCAATG	2 cut(s)	510, 1569
BseMII	CTCAG	5 cut(s)	28, 150, 875, 1308, 1496
BseNI	ACTGG	4 cut(s)	525, 550, 924, 1923
BseRI	GAGGAG	5 cut(s)	29, 1106, 1111, 1841, 2003
BseXI	GCAGC	6 cut(s)	317, 338, 650, 898, 1148, 1597
BsgI	GTGCAG	2 cut(s)	61, 1596
Bsh1236I	CGCG	1 cut(s)	619
Bsh1285I	CGRYCG	2 cut(s)	452, 564
BshFI	GGCC	4 cut(s)	285, 297, 1004, 1762
BshNI	GGYRCC	1 cut(s)	894
BsiEI	CGRYCG	2 cut(s)	452, 564
BsiSI	CCGG	6 cut(s)	96, 113, 238, 362, 594, 718
BslFI	GGGAC	2 cut(s)	721, 1474
BslI	CCNNNNNNNGG	6 cut(s)	281, 293, 347, 593, 673, 1880
BsmAI	GTCTC	2 cut(s)	551, 1068
BsmBI	CGTCTC	1 cut(s)	551
BsmFI	GGGAC	2 cut(s)	721, 1474
BsmI	GAATGC	1 cut(s)	1727
BsnI	GGCC	4 cut(s)	285, 297, 1004, 1762
Bsp1286I	GDGCHC	1 cut(s)	276
Bsp13I	TCCGGA	1 cut(s)	95
Bsp1407I	TGTACA	1 cut(s)	2014
Bsp19I	CCATGG	1 cut(s)	1256
BspACI	CCGC	8 cut(s)	90, 365, 515, 619, 639, 661, 1560, 1781
BspANI	GGCC	4 cut(s)	285, 297, 1004, 1762
BspCNI	CTCAG	5 cut(s)	27, 149, 876, 1309, 1495
BspEI	TCCGGA	1 cut(s)	95
BspFNI	CGCG	1 cut(s)	619
BspHI	TCATGA	1 cut(s)	1098
BspLI	GGNNCC	6 cut(s)	94, 117, 508, 659, 896, 1003
BspMAI	CTGCAG	1 cut(s)	916
BspPI	GGATC	9 cut(s)	87, 100, 501, 514, 652, 665, 1472, 1655, 2015
BspT107I	GGYRCC	1 cut(s)	894
BsrDI	GCAATG	2 cut(s)	510, 1569
BsrFI	RCCGGY	1 cut(s)	112
BsrGI	TGTACA	1 cut(s)	2014
BsrI	ACTGG	4 cut(s)	525, 550, 924, 1923
BssAI	RCCGGY	1 cut(s)	112
BssECI	CCNNGG	4 cut(s)	592, 740, 1256, 2024
BssNI	GRCGYC	1 cut(s)	895
BssSI	CACGAG	1 cut(s)	437
BssT1I	CCWWGG	3 cut(s)	740, 1256, 2024
Bst2BI	CACGAG	1 cut(s)	437
Bst2UI	CCWGG	1 cut(s)	1467
Bst4CI	ACNGT	6 cut(s)	199, 401, 491, 1015, 1751, 1967
BstACI	GRCGYC	1 cut(s)	895
BstAUI	TGTACA	1 cut(s)	2014
BstC8I	GCNNGC	3 cut(s)	317, 916, 1725
BstDEI	CTNAG	8 cut(s)	14, 136, 884, 1153, 1317, 1482, 1914, 1955
BstDSI	CCRYGG	1 cut(s)	1256
BstF5I	GGATG	4 cut(s)	1646, 1654, 1690, 1856
BstFNI	CGCG	1 cut(s)	619
BstH2I	RGCGCY	1 cut(s)	898
BstHHI	GCGC	3 cut(s)	605, 897, 1806
BstMAI	GTCTC	2 cut(s)	551, 1068
BstMCI	CGRYCG	2 cut(s)	452, 564
BstMWI	GCNNNNNNNGC	4 cut(s)	171, 611, 1616, 1724
BstNI	CCWGG	1 cut(s)	1467
BstNSI	RCATGY	1 cut(s)	90
BstSCI	CCNGG	3 cut(s)	237, 592, 1465
BstSFI	CTRYAG	4 cut(s)	267, 400, 912, 1299
BstUI	CGCG	1 cut(s)	619
BstV1I	GCAGC	6 cut(s)	317, 338, 650, 898, 1148, 1597
BstV2I	GAAGAC	1 cut(s)	1925
BstX2I	RGATCY	4 cut(s)	92, 506, 657, 1477
BstYI	RGATCY	4 cut(s)	92, 506, 657, 1477
BsuI	GTATCC	2 cut(s)	64, 1990
BsuRI	GGCC	4 cut(s)	285, 297, 1004, 1762
BtgI	CCRYGG	1 cut(s)	1256
BtsCI	GGATG	4 cut(s)	1646, 1654, 1690, 1856
BtsI	GCAGTG	1 cut(s)	1813
BtsIMutI	CAGTG	4 cut(s)	931, 1756, 1813, 1857
Cac8I	GCNNGC	3 cut(s)	317, 916, 1725
CciI	TCATGA	1 cut(s)	1098
CfoI	GCGC	3 cut(s)	605, 897, 1806
Cfr10I	RCCGGY	1 cut(s)	112
Cfr13I	GGNCC	5 cut(s)	284, 296, 483, 1002, 1260
CseI	GACGC	1 cut(s)	547
Csp6I	GTAC	8 cut(s)	121, 492, 745, 996, 1011, 1145, 1486, 2015
CspCI	CAANNNNNGTGG	2 cut(s)	1551, 1586
CviAII	CATG	6 cut(s)	87, 1099, 1257, 1437, 1756, 2018
CviQI	GTAC	8 cut(s)	121, 492, 745, 996, 1011, 1145, 1486, 2015
DdeI	CTNAG	8 cut(s)	14, 136, 884, 1153, 1317, 1482, 1914, 1955
DinI	GGCGCC	1 cut(s)	896
DraI	TTTAAA	1 cut(s)	946
DrdI	GACNNNNNNGTC	1 cut(s)	1432
DseDI	GACNNNNNNGTC	1 cut(s)	1432
EciI	GGCGGA	1 cut(s)	380
Eco130I	CCWWGG	3 cut(s)	740, 1256, 2024
Eco147I	AGGCCT	1 cut(s)	1762
Eco24I	GRGCYC	1 cut(s)	276
Eco32I	GATATC	2 cut(s)	683, 1348
Eco47I	GGWCC	2 cut(s)	483, 1260
Eco57I	CTGAAG	1 cut(s)	927
EcoO109I	RGGNCCY	1 cut(s)	1002
EcoRII	CCWGG	1 cut(s)	1465
EcoRV	GATATC	2 cut(s)	683, 1348
EcoT14I	CCWWGG	3 cut(s)	740, 1256, 2024
EcoT22I	ATGCAT	1 cut(s)	1442
EcoT38I	GRGCYC	1 cut(s)	276
EgeI	GGCGCC	1 cut(s)	896
EheI	GGCGCC	1 cut(s)	896
ErhI	CCWWGG	3 cut(s)	740, 1256, 2024
Esp3I	CGTCTC	1 cut(s)	551
FaeI	CATG	6 cut(s)	90, 1102, 1260, 1440, 1759, 2021
FaqI	GGGAC	2 cut(s)	721, 1474
FatI	CATG	6 cut(s)	86, 1098, 1256, 1436, 1755, 2017
FauI	CCCGC	1 cut(s)	632
Fnu4HI	GCNGC	6 cut(s)	331, 352, 664, 912, 1162, 1611
FokI	GGATG	4 cut(s)	1653, 1661, 1697, 1843
FriOI	GRGCYC	1 cut(s)	276
Fsp4HI	GCNGC	6 cut(s)	331, 352, 664, 912, 1162, 1611
FspBI	CTAG	6 cut(s)	774, 1142, 1413, 1584, 1790, 1973
GlaI	GCGC	3 cut(s)	604, 896, 1805
GluI	GCNGC	6 cut(s)	331, 352, 664, 912, 1162, 1611
GsuI	CTGGAG	5 cut(s)	308, 533, 828, 907, 1449
HaeII	RGCGCY	1 cut(s)	898
HaeIII	GGCC	4 cut(s)	285, 297, 1004, 1762
HapII	CCGG	6 cut(s)	96, 113, 238, 362, 594, 718
HgaI	GACGC	1 cut(s)	547
HhaI	GCGC	3 cut(s)	605, 897, 1806
Hin1I	GRCGYC	1 cut(s)	895
Hin1II	CATG	6 cut(s)	90, 1102, 1260, 1440, 1759, 2021
Hin6I	GCGC	3 cut(s)	603, 895, 1804
HinP1I	GCGC	3 cut(s)	603, 895, 1804
HincII	GTYRAC	1 cut(s)	1708
HindII	GTYRAC	1 cut(s)	1708
HinfI	GANTC	8 cut(s)	4, 31, 1076, 1138, 1149, 1324, 1462, 1693
HpaI	GTTAAC	1 cut(s)	1708
HpaII	CCGG	6 cut(s)	96, 113, 238, 362, 594, 718
HphI	GGTGA	3 cut(s)	608, 1863, 2037
Hpy166II	GTNNAC	5 cut(s)	436, 1525, 1708, 1963, 2045
Hpy188III	TCNNGA	9 cut(s)	96, 181, 202, 325, 437, 753, 1099, 1413, 1670
Hpy8I	GTNNAC	5 cut(s)	436, 1525, 1708, 1963, 2045
Hpy99I	CGWCG	2 cut(s)	541, 695
HpyAV	CCTTC	8 cut(s)	671, 908, 1241, 1561, 1773, 1978, 1987, 2058
HpyCH4III	ACNGT	6 cut(s)	199, 401, 491, 1015, 1751, 1967
HpyCH4IV	ACGT	1 cut(s)	494
HpyF10VI	GCNNNNNNNGC	4 cut(s)	171, 611, 1616, 1724
HpyF3I	CTNAG	8 cut(s)	14, 136, 884, 1153, 1317, 1482, 1914, 1955
HpySE526I	ACGT	1 cut(s)	494
Hsp92I	GRCGYC	1 cut(s)	895
Hsp92II	CATG	6 cut(s)	90, 1102, 1260, 1440, 1759, 2021
HspAI	GCGC	3 cut(s)	603, 895, 1804
KasI	GGCGCC	1 cut(s)	894
Kpn2I	TCCGGA	1 cut(s)	95
KspAI	GTTAAC	1 cut(s)	1708
LmnI	GCTCC	6 cut(s)	42, 552, 809, 1119, 1456, 1981
Lsp1109I	GCAGC	6 cut(s)	317, 338, 650, 898, 1148, 1597
LweI	GCATC	7 cut(s)	183, 231, 1631, 1675, 1724, 1853, 1865
MaeI	CTAG	6 cut(s)	774, 1142, 1413, 1584, 1790, 1973
MaeII	ACGT	1 cut(s)	494
MaeIII	GTNAC	5 cut(s)	248, 470, 580, 1751, 2033
MboII	GAAGA	4 cut(s)	217, 842, 1796, 1930
MfeI	CAATTG	1 cut(s)	1275
MflI	RGATCY	4 cut(s)	92, 506, 657, 1477
MhlI	GDGCHC	1 cut(s)	276
MluCI	AATT	6 cut(s)	190, 520, 967, 1275, 1430, 1603
Mly113I	GGCGCC	1 cut(s)	895
MlyI	GAGTC	4 cut(s)	1070, 1143, 1456, 1687
MmeI	TCCRAC	1 cut(s)	432
Mph1103I	ATGCAT	1 cut(s)	1442
MroI	TCCGGA	1 cut(s)	95
MroXI	GAANNNNTTC	2 cut(s)	8, 1251
MseI	TTAA	8 cut(s)	519, 630, 818, 872, 945, 1065, 1707, 2030
MslI	CAYNNNNRTG	2 cut(s)	1038, 1732
MspA1I	CMGCKG	2 cut(s)	663, 883
MspI	CCGG	6 cut(s)	96, 113, 238, 362, 594, 718
MspR9I	CCNGG	3 cut(s)	239, 594, 1467
MunI	CAATTG	1 cut(s)	1275
Mva1269I	GAATGC	1 cut(s)	1727
MvaI	CCWGG	1 cut(s)	1467
MvnI	CGCG	1 cut(s)	619
MwoI	GCNNNNNNNGC	4 cut(s)	171, 611, 1616, 1724
NarI	GGCGCC	1 cut(s)	895
NciI	CCSGG	2 cut(s)	239, 594
NcoI	CCATGG	1 cut(s)	1256
NlaIII	CATG	6 cut(s)	90, 1102, 1260, 1440, 1759, 2021
NlaIV	GGNNCC	6 cut(s)	94, 117, 508, 659, 896, 1003
NmeAIII	GCCGAG	3 cut(s)	615, 1003, 1744
NmuCI	GTSAC	4 cut(s)	248, 470, 1751, 2033
NsiI	ATGCAT	1 cut(s)	1442
NspI	RCATGY	1 cut(s)	90
PagI	TCATGA	1 cut(s)	1098
PceI	AGGCCT	1 cut(s)	1762
PctI	GAATGC	1 cut(s)	1727
PdmI	GAANNNNTTC	2 cut(s)	8, 1251
PfeI	GAWTC	4 cut(s)	4, 31, 1138, 1324
PflFI	GACNNNGTC	2 cut(s)	541, 1094
PkrI	GCNGC	6 cut(s)	332, 353, 665, 913, 1163, 1612
Ple19I	CGATCG	1 cut(s)	564
PleI	GAGTC	4 cut(s)	1070, 1143, 1456, 1687
PluTI	GGCGCC	1 cut(s)	898
PpsI	GAGTC	4 cut(s)	1070, 1143, 1456, 1687
PshBI	ATTAAT	1 cut(s)	818
Psp6I	CCWGG	1 cut(s)	1465
PspGI	CCWGG	1 cut(s)	1465
PspN4I	GGNNCC	6 cut(s)	94, 117, 508, 659, 896, 1003
PspPI	GGNCC	5 cut(s)	284, 296, 483, 1002, 1260
PstI	CTGCAG	1 cut(s)	916
PsuI	RGATCY	4 cut(s)	92, 506, 657, 1477
PsyI	GACNNNGTC	2 cut(s)	541, 1094
PvuI	CGATCG	1 cut(s)	564
PvuII	CAGCTG	1 cut(s)	883
RsaI	GTAC	8 cut(s)	122, 493, 746, 997, 1012, 1146, 1487, 2016
RsaNI	GTAC	8 cut(s)	121, 492, 745, 996, 1011, 1145, 1486, 2015
RseI	CAYNNNNRTG	2 cut(s)	1038, 1732
SaqAI	TTAA	8 cut(s)	519, 630, 818, 872, 945, 1065, 1707, 2030
SatI	GCNGC	6 cut(s)	331, 352, 664, 912, 1162, 1611
Sau96I	GGNCC	5 cut(s)	284, 296, 483, 1002, 1260
SchI	GAGTC	4 cut(s)	1070, 1143, 1456, 1687
ScrFI	CCNGG	3 cut(s)	239, 594, 1467
SduI	GDGCHC	1 cut(s)	276
SfaNI	GCATC	7 cut(s)	183, 231, 1631, 1675, 1724, 1853, 1865
SfcI	CTRYAG	4 cut(s)	267, 400, 912, 1299
SfoI	GGCGCC	1 cut(s)	896
SinI	GGWCC	2 cut(s)	483, 1260
SmiMI	CAYNNNNRTG	2 cut(s)	1038, 1732
Sse9I	AATT	6 cut(s)	190, 520, 967, 1275, 1430, 1603
SseBI	AGGCCT	1 cut(s)	1762
SsiI	CCGC	8 cut(s)	90, 365, 515, 619, 639, 661, 1560, 1781
SspDI	GGCGCC	1 cut(s)	894
SspMI	CTAG	6 cut(s)	774, 1142, 1413, 1584, 1790, 1973
StuI	AGGCCT	1 cut(s)	1762
StyD4I	CCNGG	3 cut(s)	237, 592, 1465
StyI	CCWWGG	3 cut(s)	740, 1256, 2024
TaaI	ACNGT	6 cut(s)	199, 401, 491, 1015, 1751, 1967
TaiI	ACGT	1 cut(s)	497
TaqI	TCGA	5 cut(s)	182, 231, 536, 564, 1671
TaqII	GACCGA	2 cut(s)	438, 1394
TasI	AATT	6 cut(s)	190, 520, 967, 1275, 1430, 1603
TatI	WGTACW	1 cut(s)	2014
TfiI	GAWTC	4 cut(s)	4, 31, 1138, 1324
Tru1I	TTAA	8 cut(s)	519, 630, 818, 872, 945, 1065, 1707, 2030
Tru9I	TTAA	8 cut(s)	519, 630, 818, 872, 945, 1065, 1707, 2030
TscAI	CASTG	4 cut(s)	931, 1756, 1813, 1857
TseFI	GTSAC	4 cut(s)	248, 470, 1751, 2033
TseI	GCWGC	6 cut(s)	330, 351, 663, 911, 1161, 1610
Tsp45I	GTSAC	4 cut(s)	248, 470, 1751, 2033
TspDTI	ATGAA	9 cut(s)	17, 1056, 1115, 1209, 1337, 1580, 1665, 1857, 1997
TspGWI	ACGGA	6 cut(s)	40, 108, 638, 1114, 1693, 1896
TspRI	CASTG	4 cut(s)	931, 1756, 1813, 1857
Tth111I	GACNNNGTC	2 cut(s)	541, 1094
VpaK11BI	GGWCC	2 cut(s)	483, 1260
VspI	ATTAAT	1 cut(s)	818
XbaI	TCTAGA	1 cut(s)	1412
XceI	RCATGY	1 cut(s)	90
XmnI	GAANNNNTTC	2 cut(s)	8, 1251
XspI	CTAG	6 cut(s)	774, 1142, 1413, 1584, 1790, 1973
Zsp2I	ATGCAT	1 cut(s)	1442

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.