Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0006303

Physical Location & Seq

Genomic Coordinates Forward (+)

2379935 .. 2383856

Gene Structure 3922 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G021600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 975 bp

ATGGTTCTCCACCAAAAGTCTCTGACTTTGATCACTATCATCACCATCCTTATCACTACAACCTCCATAGCCAACATAGCCAGAGCTCAAAACTCAAGCTCCTGCAAACTCACATGCGGATCGGGAAAATCAGCCAAGTCGGTTCAGTACCCATTTGGGTTCTCAGAAGGATGTGTAATCCCATTGAACTGTTCTGACAAAAACGAAATCAAACTCGGAGAATTCACAGTCCAAAACGTAACCAGAAGCAGCATCTTCGTCCACCTCCCTGCACAGTGTAACAGAAGGTACCAATCCATAGCCCCTCTATTCGGCCCAAACTTCGGCCCAAGCTGGGACAACAGCCTTCTCTTCCAAAACTGCACCTCCCCACCCCCTGGCTGCCAAATCCCAGCTGAATTTGTTCAGAAGCGGTTCAATTTATCGAGCTGCGATAGTATCACCTGTATGTCACAGGCGCCTAACGGCTCCGATATTATGAGATTTGAGGACTTGAAATGGACCCGGTGCAATTACTTGTTCGGGTCGTTTGCGGTTCAGTCGGGTCGGGACTCGCTGCTGTCGCTCGAGTTCGAGACGCTTCAGTTGGGTTGGTGGGTCCACACCGGCCTTTGTGAATGCCATTTGAATGCCACGTACACGACGGTGAAGCTCGGTGAGGGGAAGCCGCCTGGGTGCCGATGCAGCTGCAACGCTGGGTTTCACGGCGACGGGTTCAAACGCGGGTCGGGTTGCCAGACAGTGAGCCAACCGGGTACTGCAACGCCGGAATATCACAGTAAAGATGATAACGAAGGGTTTTGGTTTCACGTCAGCATGGTACTTGGTTTCATCTTAGGCTTTTGGGCTGTTTGTGGAACGTTGGTCTTGAAAAATTCATGGAGGTATGCCTATTTTAATATCTTTGACAACATGAAGGAGAAGGTAGCCTTAAAAATTGCATTGAAAGTAGCTCGTTGGCAAGGACGATTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

325

Amino Acids

35.91

Weight (kDa)

8.72

Isoelectric Point (pI)

39.68

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006303)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G23450 AT2G23450 AT4G00955 AT4G00955
fragaria_vesca	FvH4_1g14540 FvH4_1g14540 FvH4_1g14540 FvH4_1g14540
malus_domestica	MD02G1159100.v1.1 MD15G1273700.v1.1
prunus_persica	Prupe.5G021600_v2.0.a1 Prupe.7G145100_v2.0.a1 Prupe.7G145100_v2.0.a1 Prupe.7G145100_v2.0.a1
pyrus_communis	pycom02g12520 pycom15g23660
rosa_chinensis	RchiOBHm_Chr2g0103291
rosa_laevigata	RLG00000017220
rosa_multiflora	Rmu_sc0006743.1_g000008
rosa_roxburghii	Rroxscaffold_2G00139770
rosa_rugosa	Rorug02G0113100
rosa_samantha	Rh2AG161900 Rh2BG168800 Rh2CG168800 Rh2DG167700
rosa_wichuraiana	Rw0G019380 Rw2G012700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	288
AccB1I	GGYRCC	3 cut(s)	288, 457, 675
AccB7I	CCANNNNNTGG	1 cut(s)	377
AccII	CGCG	1 cut(s)	723
AciI	CCGC	5 cut(s)	117, 412, 533, 668, 723
AclI	AACGTT	1 cut(s)	860
AclWI	GGATC	1 cut(s)	127
AcsI	RAATTY	3 cut(s)	221, 398, 874
AcuI	CTGAAG	1 cut(s)	566
AcyI	GRCGYC	1 cut(s)	458
AfaI	GTAC	5 cut(s)	149, 290, 638, 757, 822
AfiI	CCNNNNNNNGG	4 cut(s)	311, 323, 334, 377
AgsI	TTSAA	7 cut(s)	187, 418, 496, 628, 718, 871, 946
AjiI	CACGTC	1 cut(s)	811
AjnI	CCWGG	2 cut(s)	376, 670
AleI	CACNNNNGTG	1 cut(s)	644
AluBI	AGCT	8 cut(s)	86, 99, 333, 395, 429, 652, 687, 953
AluI	AGCT	8 cut(s)	86, 99, 333, 395, 429, 652, 687, 953
Alw21I	GWGCWC	1 cut(s)	88
Alw26I	GTCTC	2 cut(s)	24, 569
AlwI	GGATC	1 cut(s)	127
Ama87I	CYCGRG	1 cut(s)	566
AoxI	GGCC	3 cut(s)	313, 325, 607
ApeKI	GCWGC	6 cut(s)	249, 381, 429, 556, 684, 687
ApoI	RAATTY	3 cut(s)	221, 398, 874
Asp700I	GAANNNNTTC	2 cut(s)	402, 413
Asp718I	GGTACC	1 cut(s)	288
AspLEI	GCGC	1 cut(s)	460
AspS9I	GGNCC	4 cut(s)	314, 326, 501, 598
AsuC2I	CCSGG	2 cut(s)	505, 753
AsuHPI	GGTGA	4 cut(s)	34, 433, 658, 668
AvaI	CYCGRG	1 cut(s)	566
AvaII	GGWCC	2 cut(s)	501, 598
BanI	GGYRCC	3 cut(s)	288, 457, 675
BanII	GRGCYC	1 cut(s)	88
Bbv12I	GWGCWC	1 cut(s)	88
BbvI	GCAGC	6 cut(s)	261, 368, 416, 543, 674, 696
BccI	CCATC	1 cut(s)	53
BceAI	ACGGC	2 cut(s)	481, 721
BcgI	CGANNNNNNTGC	4 cut(s)	238, 272, 669, 703
BciT130I	CCWGG	2 cut(s)	378, 672
BclI	TGATCA	1 cut(s)	30
BcnI	CCSGG	2 cut(s)	505, 753
BcoDI	GTCTC	2 cut(s)	24, 569
BfoI	RGCGCY	1 cut(s)	461
BisI	GCNGC	7 cut(s)	250, 382, 430, 557, 668, 685, 688
BlsI	GCNGC	7 cut(s)	251, 383, 431, 558, 669, 686, 689
Bme1390I	CCNGG	4 cut(s)	378, 505, 672, 753
Bme18I	GGWCC	2 cut(s)	501, 598
BmeT110I	CYCGRG	1 cut(s)	566
BmgBI	CACGTC	1 cut(s)	811
BmgT120I	GGNCC	4 cut(s)	314, 326, 501, 598
BmiI	GGNNCC	6 cut(s)	290, 459, 469, 503, 599, 677
BmrFI	CCNGG	4 cut(s)	378, 505, 672, 753
BmsI	GCATC	2 cut(s)	261, 671
BpuEI	CTTGAG	1 cut(s)	79
BpuMI	CCSGG	2 cut(s)	505, 753
BsaAI	YACGTR	1 cut(s)	636
BsaBI	GATNNNNATC	1 cut(s)	35
BsaHI	GRCGYC	1 cut(s)	458
BsaJI	CCNNGG	2 cut(s)	376, 671
BsaXI	ACNNNNNCTCC	4 cut(s)	83, 113, 350, 380
Bsc4I	CCNNNNNNNGG	4 cut(s)	311, 323, 334, 377
Bse118I	RCCGGY	1 cut(s)	605
Bse8I	GATNNNNATC	1 cut(s)	35
BseBI	CCWGG	2 cut(s)	378, 672
BseDI	CCNNGG	2 cut(s)	376, 671
BseGI	GGATG	2 cut(s)	45, 176
BseJI	GATNNNNATC	1 cut(s)	35
BseLI	CCNNNNNNNGG	4 cut(s)	311, 323, 334, 377
BseMII	CTCAG	1 cut(s)	177
BseXI	GCAGC	6 cut(s)	261, 368, 416, 543, 674, 696
BseYI	CCCAGC	3 cut(s)	333, 391, 695
BsgI	GTGCAG	2 cut(s)	255, 346
Bsh1236I	CGCG	1 cut(s)	723
BshFI	GGCC	3 cut(s)	315, 327, 609
BshNI	GGYRCC	3 cut(s)	288, 457, 675
BsiHKAI	GWGCWC	1 cut(s)	88
BsiHKCI	CYCGRG	1 cut(s)	566
BsiSI	CCGG	4 cut(s)	505, 606, 752, 767
BslFI	GGGAC	2 cut(s)	350, 563
BslI	CCNNNNNNNGG	4 cut(s)	311, 323, 334, 377
BsmAI	GTCTC	2 cut(s)	24, 569
BsmBI	CGTCTC	1 cut(s)	569
BsmFI	GGGAC	2 cut(s)	350, 563
BsmI	GAATGC	2 cut(s)	623, 634
BsnI	GGCC	3 cut(s)	315, 327, 609
BsoBI	CYCGRG	1 cut(s)	566
Bsp1286I	GDGCHC	1 cut(s)	88
Bsp143I	GATC	2 cut(s)	30, 119
BspACI	CCGC	5 cut(s)	117, 412, 533, 668, 723
BspANI	GGCC	3 cut(s)	315, 327, 609
BspCNI	CTCAG	1 cut(s)	176
BspFNI	CGCG	1 cut(s)	723
BspLI	GGNNCC	6 cut(s)	290, 459, 469, 503, 599, 677
BspPI	GGATC	1 cut(s)	127
BspT107I	GGYRCC	3 cut(s)	288, 457, 675
BsrFI	RCCGGY	1 cut(s)	605
BssAI	RCCGGY	1 cut(s)	605
BssECI	CCNNGG	2 cut(s)	376, 671
BssMI	GATC	2 cut(s)	30, 119
BssNI	GRCGYC	1 cut(s)	458
Bst2UI	CCWGG	2 cut(s)	378, 672
Bst4CI	ACNGT	6 cut(s)	191, 229, 276, 646, 742, 779
Bst6I	CTCTTC	1 cut(s)	356
BstACI	GRCGYC	1 cut(s)	458
BstBAI	YACGTR	1 cut(s)	636
BstDEI	CTNAG	2 cut(s)	163, 835
BstF5I	GGATG	2 cut(s)	45, 176
BstFNI	CGCG	1 cut(s)	723
BstH2I	RGCGCY	1 cut(s)	461
BstHHI	GCGC	1 cut(s)	460
BstKTI	GATC	2 cut(s)	33, 122
BstMAI	GTCTC	2 cut(s)	24, 569
BstMBI	GATC	2 cut(s)	30, 119
BstMWI	GCNNNNNNNGC	3 cut(s)	77, 562, 684
BstNI	CCWGG	2 cut(s)	378, 672
BstNSI	RCATGY	1 cut(s)	117
BstSCI	CCNGG	4 cut(s)	376, 503, 670, 751
BstUI	CGCG	1 cut(s)	723
BstV1I	GCAGC	6 cut(s)	261, 368, 416, 543, 674, 696
BsuRI	GGCC	3 cut(s)	315, 327, 609
BtrI	CACGTC	1 cut(s)	811
BtsCI	GGATG	2 cut(s)	45, 176
BtsIMutI	CAGTG	2 cut(s)	281, 747
CfoI	GCGC	1 cut(s)	460
Cfr10I	RCCGGY	1 cut(s)	605
Cfr13I	GGNCC	4 cut(s)	314, 326, 501, 598
CseI	GACGC	1 cut(s)	586
Csp6I	GTAC	5 cut(s)	148, 289, 637, 756, 821
CviAII	CATG	4 cut(s)	114, 817, 879, 913
CviQI	GTAC	5 cut(s)	148, 289, 637, 756, 821
DdeI	CTNAG	2 cut(s)	163, 835
DinI	GGCGCC	1 cut(s)	459
DpnI	GATC	2 cut(s)	32, 121
DpnII	GATC	2 cut(s)	30, 119
Eam1104I	CTCTTC	1 cut(s)	356
EarI	CTCTTC	1 cut(s)	356
Ecl136II	GAGCTC	1 cut(s)	86
Eco24I	GRGCYC	1 cut(s)	88
Eco47I	GGWCC	2 cut(s)	501, 598
Eco53kI	GAGCTC	1 cut(s)	86
Eco57I	CTGAAG	1 cut(s)	566
Eco88I	CYCGRG	1 cut(s)	566
EcoICRI	GAGCTC	1 cut(s)	86
EcoRI	GAATTC	1 cut(s)	221
EcoRII	CCWGG	2 cut(s)	376, 670
EcoT38I	GRGCYC	1 cut(s)	88
EgeI	GGCGCC	1 cut(s)	459
EheI	GGCGCC	1 cut(s)	459
Esp3I	CGTCTC	1 cut(s)	569
FaeI	CATG	4 cut(s)	117, 820, 882, 916
FalI	AAGNNNNNCTT	2 cut(s)	914, 946
FaqI	GGGAC	2 cut(s)	350, 563
FatI	CATG	4 cut(s)	113, 816, 878, 912
FauI	CCCGC	1 cut(s)	716
FbaI	TGATCA	1 cut(s)	30
Fnu4HI	GCNGC	7 cut(s)	250, 382, 430, 557, 668, 685, 688
FokI	GGATG	2 cut(s)	32, 183
FriOI	GRGCYC	1 cut(s)	88
Fsp4HI	GCNGC	7 cut(s)	250, 382, 430, 557, 668, 685, 688
GlaI	GCGC	1 cut(s)	459
GluI	GCNGC	7 cut(s)	250, 382, 430, 557, 668, 685, 688
GsaI	CCCAGC	3 cut(s)	337, 395, 699
HaeII	RGCGCY	1 cut(s)	461
HaeIII	GGCC	3 cut(s)	315, 327, 609
HapII	CCGG	4 cut(s)	505, 606, 752, 767
HgaI	GACGC	1 cut(s)	586
HhaI	GCGC	1 cut(s)	460
Hin1I	GRCGYC	1 cut(s)	458
Hin1II	CATG	4 cut(s)	117, 820, 882, 916
Hin6I	GCGC	1 cut(s)	458
HinP1I	GCGC	1 cut(s)	458
HinfI	GANTC	1 cut(s)	551
HpaII	CCGG	4 cut(s)	505, 606, 752, 767
HphI	GGTGA	4 cut(s)	34, 433, 658, 668
Hpy166II	GTNNAC	3 cut(s)	262, 601, 639
Hpy188I	TCNGA	6 cut(s)	24, 166, 196, 218, 408, 472
Hpy188III	TCNNGA	4 cut(s)	123, 548, 574, 868
Hpy8I	GTNNAC	3 cut(s)	262, 601, 639
Hpy99I	CGWCG	2 cut(s)	646, 713
HpyAV	CCTTC	6 cut(s)	161, 279, 356, 788, 910, 916
HpyCH4III	ACNGT	6 cut(s)	191, 229, 276, 646, 742, 779
HpyCH4IV	ACGT	4 cut(s)	237, 635, 810, 860
HpyCH4V	TGCA	8 cut(s)	105, 272, 363, 510, 684, 690, 761, 941
HpyF10VI	GCNNNNNNNGC	3 cut(s)	77, 562, 684
HpyF3I	CTNAG	2 cut(s)	163, 835
HpySE526I	ACGT	4 cut(s)	237, 635, 810, 860
Hsp92I	GRCGYC	1 cut(s)	458
Hsp92II	CATG	4 cut(s)	117, 820, 882, 916
HspAI	GCGC	1 cut(s)	458
KasI	GGCGCC	1 cut(s)	457
KpnI	GGTACC	1 cut(s)	292
Ksp22I	TGATCA	1 cut(s)	30
Kzo9I	GATC	2 cut(s)	30, 119
LmnI	GCTCC	2 cut(s)	104, 473
Lsp1109I	GCAGC	6 cut(s)	261, 368, 416, 543, 674, 696
LweI	GCATC	2 cut(s)	261, 671
MaeII	ACGT	4 cut(s)	237, 635, 810, 860
MaeIII	GTNAC	3 cut(s)	238, 278, 450
MalI	GATC	2 cut(s)	32, 121
MboI	GATC	2 cut(s)	30, 119
MboII	GAAGA	2 cut(s)	247, 343
MhlI	GDGCHC	1 cut(s)	88
MluCI	AATT	6 cut(s)	221, 398, 418, 511, 874, 936
Mly113I	GGCGCC	1 cut(s)	458
MlyI	GAGTC	1 cut(s)	545
MnlI	CCTC	7 cut(s)	73, 275, 315, 376, 481, 652, 876
MroXI	GAANNNNTTC	2 cut(s)	402, 413
MseI	TTAA	2 cut(s)	897, 932
MslI	CAYNNNNRTG	3 cut(s)	446, 627, 644
MspA1I	CMGCKG	2 cut(s)	395, 687
MspI	CCGG	4 cut(s)	505, 606, 752, 767
MspR9I	CCNGG	4 cut(s)	378, 505, 672, 753
Mva1269I	GAATGC	2 cut(s)	623, 634
MvaI	CCWGG	2 cut(s)	378, 672
MvnI	CGCG	1 cut(s)	723
MwoI	GCNNNNNNNGC	3 cut(s)	77, 562, 684
NarI	GGCGCC	1 cut(s)	458
NciI	CCSGG	2 cut(s)	505, 753
NdeII	GATC	2 cut(s)	30, 119
NlaIII	CATG	4 cut(s)	117, 820, 882, 916
NlaIV	GGNNCC	6 cut(s)	290, 459, 469, 503, 599, 677
NmuCI	GTSAC	1 cut(s)	450
NspI	RCATGY	1 cut(s)	117
OliI	CACNNNNGTG	1 cut(s)	644
PaeR7I	CTCGAG	1 cut(s)	566
PctI	GAATGC	2 cut(s)	623, 634
PdmI	GAANNNNTTC	2 cut(s)	402, 413
PflMI	CCANNNNNTGG	1 cut(s)	377
PkrI	GCNGC	7 cut(s)	251, 383, 431, 558, 669, 686, 689
PleI	GAGTC	1 cut(s)	545
PluTI	GGCGCC	1 cut(s)	461
PpsI	GAGTC	1 cut(s)	545
Ppu21I	YACGTR	1 cut(s)	636
Psp124BI	GAGCTC	1 cut(s)	88
Psp1406I	AACGTT	1 cut(s)	860
Psp6I	CCWGG	2 cut(s)	376, 670
PspFI	CCCAGC	3 cut(s)	333, 391, 695
PspGI	CCWGG	2 cut(s)	376, 670
PspN4I	GGNNCC	6 cut(s)	290, 459, 469, 503, 599, 677
PspPI	GGNCC	4 cut(s)	314, 326, 501, 598
PspXI	VCTCGAGB	1 cut(s)	566
PvuII	CAGCTG	2 cut(s)	395, 687
RsaI	GTAC	5 cut(s)	149, 290, 638, 757, 822
RsaNI	GTAC	5 cut(s)	148, 289, 637, 756, 821
RseI	CAYNNNNRTG	3 cut(s)	446, 627, 644
SacI	GAGCTC	1 cut(s)	88
SaqAI	TTAA	2 cut(s)	897, 932
SatI	GCNGC	7 cut(s)	250, 382, 430, 557, 668, 685, 688
Sau3AI	GATC	2 cut(s)	30, 119
Sau96I	GGNCC	4 cut(s)	314, 326, 501, 598
SchI	GAGTC	1 cut(s)	545
ScrFI	CCNGG	4 cut(s)	378, 505, 672, 753
SduI	GDGCHC	1 cut(s)	88
SfaNI	GCATC	2 cut(s)	261, 671
SfoI	GGCGCC	1 cut(s)	459
Sfr274I	CTCGAG	1 cut(s)	566
SinI	GGWCC	2 cut(s)	501, 598
SlaI	CTCGAG	1 cut(s)	566
SmiMI	CAYNNNNRTG	3 cut(s)	446, 627, 644
SmlI	CTYRAG	2 cut(s)	94, 566
SmoI	CTYRAG	2 cut(s)	94, 566
Sse9I	AATT	6 cut(s)	221, 398, 418, 511, 874, 936
SsiI	CCGC	5 cut(s)	117, 412, 533, 668, 723
SspDI	GGCGCC	1 cut(s)	457
SstI	GAGCTC	1 cut(s)	88
StyD4I	CCNGG	4 cut(s)	376, 503, 670, 751
TaaI	ACNGT	6 cut(s)	191, 229, 276, 646, 742, 779
TaiI	ACGT	4 cut(s)	240, 638, 813, 863
TaqI	TCGA	3 cut(s)	425, 567, 573
TasI	AATT	6 cut(s)	221, 398, 418, 511, 874, 936
TauI	GCSGC	1 cut(s)	670
Tru1I	TTAA	2 cut(s)	897, 932
Tru9I	TTAA	2 cut(s)	897, 932
TscAI	CASTG	2 cut(s)	281, 747
TseFI	GTSAC	1 cut(s)	450
TseI	GCWGC	6 cut(s)	249, 381, 429, 556, 684, 687
Tsp45I	GTSAC	1 cut(s)	450
TspDTI	ATGAA	3 cut(s)	820, 867, 929
TspRI	CASTG	2 cut(s)	281, 747
Van91I	CCANNNNNTGG	1 cut(s)	377
VpaK11BI	GGWCC	2 cut(s)	501, 598
XapI	RAATTY	3 cut(s)	221, 398, 874
XceI	RCATGY	1 cut(s)	117
XhoI	CTCGAG	1 cut(s)	566
XmnI	GAANNNNTTC	2 cut(s)	402, 413

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.