RH2CG168800

wall-associated receptor kinase-like

Basic Information

Type: Sequence Only
Biological Identity
rosa_samantha
Unknown
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG168800.1

Sequence Viewer

Length: 1407 bp
ATGCCACGCGTACGGACGTTAAGCTCGGCGGGAGGAAAACTCCGGGGATCCGCTGCCGATGTAAGGAAGGATATCACGGCGACGGGTTCAGAAACGGGACGGGTTGCCGGAGAGTTTCTGAATGCAATGCTTCAAGGTACTTGTCTGGACGTTTTGGGGGAAGAGTTGGTATTCTTATTGCAGCGTTCCACTTGCTTAAAAAACCAGCTGAGTGCAAGGCGCCTTCTATCTGAAGCTGCAGGCTCCAGTGTTCCATTATATCCCTTTAAAGAAATAGAGAGAGCTACTAATTGCTTTGCTGAGAAACAGAGGTTGGGTACAGGGGCCTTTGGTACAGTTTATGCAGGAAAACTCCACAATGATGAATGGGTTGCGATAAAAAAGATTAAATACCGAGACTCTAACAGCATTGACCAAGTCATGAATGAGATCAAACTCCTCTCCTCCGTGAGCCACCCGAATCTAGTGCGACTCTTAGGTTGCTGCATAGAGGGAGGCGAACAGATACTTGTATATGAATATATGCCTAATGGAACGCTATCTCAACATCTACAAAGAGAGAGGGGAGAAGGACTTCCATGGACCATAAGGCTCACAATTGCTTCTGAAACTGCCAATGCTATAGCCTATCTCCACTCTGAGATGAATCCACCAATCTATCATAGAGATATCAAATCCAGCAACATACTTTTGGACTTCAACTACAAATCAAAGGTAGCAGATTTCGGTCTTTCTAGACTTGGAATGACAGAATTGTCATGCATATCAACAGCTCCACAAGGGACTCCAGGCTATGTAGATCCTCAGTACCATCAAAACTTCCATCTTTCTGATAGAAGTGATGTTTACAGCTTCGGGGTAGTTTTAGTAGAGATAATAACCGCAATGAAGGTGGTTGATTTTGCTAGACCTCAAACCGAGATCAATTTGGCTGCACTTGCTATTGATAGAATAGGGAAAGGATGCTTGGATGAAATAGTTGATCCTTTTCTCGAACCAAATAGGGATGCTTGGACTCTTTACTCCATTAACAAGGTAGCCGAGCTTGCATTCAGATGCCTTGCTTTTCACAGCGACATGAGGCCTTCTATGACAGAAGTTGCGGAAGAACTAGAATATGTCAGGCGCAGTGGGTGGGCCACGATGGAGGAGAATGTAGGCACAGCATCATCAGTGGCATCCTCTTGTTCATCACCGTATAACGGAAGTGAGAGGTCATTGGGTGGTCTGACTGCTAAGAAGACCAGTATAAGAAGCCAGAGATCAATCGTTTCACTAAGGGTGGACAGTTCCCTAGCTCCGATGAAGGAGGAGAAGGATAACTCTCCTGTTTCTGTACATGATCCTTGGTTAAGTGACCAGAGTTCACCTTCAACAAACAGCTTATTGGGTAATGTAGTTCAGTGA

Protein Analysis

468

Amino Acids

51.48

Weight (kDa)

6.05

Isoelectric Point (pI)

44.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 100 - 369 2.8e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 102 - 371 9.6e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 754
AccB1I GGYRCC 1 cut(s) 219
AccII CGCG 1 cut(s) 9
AciI CCGC 4 cut(s) 29, 51, 882, 1103
AclWI GGATC 5 cut(s) 42, 55, 794, 977, 1337
AcuI CTGAAG 1 cut(s) 252
AcyI GRCGYC 1 cut(s) 220
AfaI GTAC 6 cut(s) 12, 139, 319, 334, 809, 1338
AfiI CCNNNNNNNGG 2 cut(s) 63, 1202
AflIII ACRYGT 1 cut(s) 7
AgsI TTSAA 3 cut(s) 134, 700, 1374
AjnI CCWGG 1 cut(s) 787
AjuI GAANNNNNNNTTGG 4 cut(s) 296, 328, 950, 982
AluBI AGCT 9 cut(s) 24, 208, 236, 284, 773, 852, 1045, 1298, 1383
AluI AGCT 9 cut(s) 24, 208, 236, 284, 773, 852, 1045, 1298, 1383
Alw26I GTCTC 1 cut(s) 390
AlwI GGATC 5 cut(s) 42, 55, 794, 977, 1337
AoxI GGCC 3 cut(s) 324, 1082, 1137
ApeKI GCWGC 5 cut(s) 53, 181, 236, 483, 932
Asp700I GAANNNNTTC 1 cut(s) 573
AspLEI GCGC 2 cut(s) 222, 1128
AspS9I GGNCC 3 cut(s) 324, 582, 1137
AsuC2I CCSGG 1 cut(s) 44
AsuHPI GGTGA 2 cut(s) 1185, 1359
AvaII GGWCC 1 cut(s) 582
BamHI GGATCC 1 cut(s) 47
BanI GGYRCC 1 cut(s) 219
BbsI GAAGAC 1 cut(s) 1247
BbvI GCAGC 5 cut(s) 40, 193, 223, 470, 919
BccI CCATC 3 cut(s) 819, 831, 1138
BceAI ACGGC 1 cut(s) 93
BcgI CGANNNNNNTGC 2 cut(s) 448, 482
BciT130I CCWGG 1 cut(s) 789
BcnI CCSGG 1 cut(s) 44
BcoDI GTCTC 1 cut(s) 390
BfaI CTAG 5 cut(s) 464, 735, 906, 1112, 1295
BfmI CTRYAG 2 cut(s) 237, 621
BfoI RGCGCY 1 cut(s) 223
BisI GCNGC 5 cut(s) 54, 182, 237, 484, 933
BlsI GCNGC 5 cut(s) 55, 183, 238, 485, 934
Bme1390I CCNGG 2 cut(s) 44, 789
Bme18I GGWCC 1 cut(s) 582
BmgT120I GGNCC 3 cut(s) 324, 582, 1137
BmiI GGNNCC 4 cut(s) 49, 221, 244, 325
BmrFI CCNGG 2 cut(s) 44, 789
BmsI GCATC 5 cut(s) 953, 997, 1046, 1175, 1187
BpiI GAAGAC 1 cut(s) 1247
BplI GAGNNNNNCTC 2 cut(s) 24, 56
BpmI CTGGAG 2 cut(s) 229, 771
BpuMI CCSGG 1 cut(s) 44
BsaHI GRCGYC 1 cut(s) 220
BsaJI CCNNGG 3 cut(s) 43, 578, 1346
Bsc4I CCNNNNNNNGG 2 cut(s) 63, 1202
Bse1I ACTGG 2 cut(s) 246, 1245
Bse3DI GCAATG 2 cut(s) 132, 891
BseBI CCWGG 1 cut(s) 789
BseDI CCNNGG 3 cut(s) 43, 578, 1346
BseGI GGATG 4 cut(s) 968, 976, 1012, 1178
BseLI CCNNNNNNNGG 2 cut(s) 63, 1202
BseMI GCAATG 2 cut(s) 132, 891
BseMII CTCAG 4 cut(s) 200, 291, 630, 818
BseNI ACTGG 2 cut(s) 246, 1245
BseRI GAGGAG 4 cut(s) 428, 433, 1163, 1325
BseXI GCAGC 5 cut(s) 40, 193, 223, 470, 919
BsgI GTGCAG 1 cut(s) 918
Bsh1236I CGCG 1 cut(s) 9
BshFI GGCC 3 cut(s) 326, 1084, 1139
BshNI GGYRCC 1 cut(s) 219
BsiSI CCGG 2 cut(s) 43, 108
BsiWI CGTACG 1 cut(s) 10
BslFI GGGAC 2 cut(s) 111, 796
BslI CCNNNNNNNGG 2 cut(s) 63, 1202
BsmAI GTCTC 1 cut(s) 390
BsmFI GGGAC 2 cut(s) 111, 796
BsmI GAATGC 2 cut(s) 127, 1049
BsnI GGCC 3 cut(s) 326, 1084, 1139
Bsp1407I TGTACA 1 cut(s) 1336
Bsp143I GATC 7 cut(s) 47, 429, 799, 921, 982, 1262, 1342
Bsp19I CCATGG 1 cut(s) 578
BspACI CCGC 4 cut(s) 29, 51, 882, 1103
BspANI GGCC 3 cut(s) 326, 1084, 1139
BspCNI CTCAG 4 cut(s) 201, 292, 631, 817
BspFNI CGCG 1 cut(s) 9
BspHI TCATGA 1 cut(s) 420
BspLI GGNNCC 4 cut(s) 49, 221, 244, 325
BspMAI CTGCAG 1 cut(s) 241
BspPI GGATC 5 cut(s) 42, 55, 794, 977, 1337
BspT107I GGYRCC 1 cut(s) 219
BsrDI GCAATG 2 cut(s) 132, 891
BsrGI TGTACA 1 cut(s) 1336
BsrI ACTGG 2 cut(s) 246, 1245
BssECI CCNNGG 3 cut(s) 43, 578, 1346
BssMI GATC 7 cut(s) 47, 429, 799, 921, 982, 1262, 1342
BssNI GRCGYC 1 cut(s) 220
BssT1I CCWWGG 2 cut(s) 578, 1346
Bst2UI CCWGG 1 cut(s) 789
Bst4CI ACNGT 3 cut(s) 337, 1197, 1289
Bst6I CTCTTC 1 cut(s) 156
BstACI GRCGYC 1 cut(s) 220
BstAUI TGTACA 1 cut(s) 1336
BstC8I GCNNGC 2 cut(s) 241, 1047
BstDEI CTNAG 7 cut(s) 209, 300, 475, 639, 804, 1236, 1277
BstDSI CCRYGG 1 cut(s) 578
BstF5I GGATG 4 cut(s) 968, 976, 1012, 1178
BstFNI CGCG 1 cut(s) 9
BstH2I RGCGCY 1 cut(s) 223
BstHHI GCGC 2 cut(s) 222, 1128
BstKTI GATC 7 cut(s) 50, 432, 802, 924, 985, 1265, 1345
BstMAI GTCTC 1 cut(s) 390
BstMBI GATC 7 cut(s) 47, 429, 799, 921, 982, 1262, 1342
BstMWI GCNNNNNNNGC 2 cut(s) 938, 1046
BstNI CCWGG 1 cut(s) 789
BstSCI CCNGG 2 cut(s) 42, 787
BstSFI CTRYAG 2 cut(s) 237, 621
BstUI CGCG 1 cut(s) 9
BstV1I GCAGC 5 cut(s) 40, 193, 223, 470, 919
BstV2I GAAGAC 1 cut(s) 1247
BstX2I RGATCY 2 cut(s) 47, 799
BstYI RGATCY 2 cut(s) 47, 799
BsuRI GGCC 3 cut(s) 326, 1084, 1139
BtgI CCRYGG 1 cut(s) 578
BtsCI GGATG 4 cut(s) 968, 976, 1012, 1178
BtsI GCAGTG 1 cut(s) 1135
BtsIMutI CAGTG 3 cut(s) 253, 1135, 1179
Cac8I GCNNGC 2 cut(s) 241, 1047
CciI TCATGA 1 cut(s) 420
CfoI GCGC 2 cut(s) 222, 1128
Cfr13I GGNCC 3 cut(s) 324, 582, 1137
Csp6I GTAC 6 cut(s) 11, 138, 318, 333, 808, 1337
CspCI CAANNNNNGTGG 2 cut(s) 873, 908
CviAII CATG 5 cut(s) 421, 579, 759, 1078, 1340
CviQI GTAC 6 cut(s) 11, 138, 318, 333, 808, 1337
DdeI CTNAG 7 cut(s) 209, 300, 475, 639, 804, 1236, 1277
DinI GGCGCC 1 cut(s) 221
DpnI GATC 7 cut(s) 49, 431, 801, 923, 984, 1264, 1344
DpnII GATC 7 cut(s) 47, 429, 799, 921, 982, 1262, 1342
DraI TTTAAA 1 cut(s) 268
DrdI GACNNNNNNGTC 1 cut(s) 754
DseDI GACNNNNNNGTC 1 cut(s) 754
Eam1104I CTCTTC 1 cut(s) 156
EarI CTCTTC 1 cut(s) 156
Eco130I CCWWGG 2 cut(s) 578, 1346
Eco147I AGGCCT 1 cut(s) 1084
Eco32I GATATC 2 cut(s) 73, 670
Eco47I GGWCC 1 cut(s) 582
Eco57I CTGAAG 1 cut(s) 252
EcoO109I RGGNCCY 1 cut(s) 324
EcoRII CCWGG 1 cut(s) 787
EcoRV GATATC 2 cut(s) 73, 670
EcoT14I CCWWGG 2 cut(s) 578, 1346
EcoT22I ATGCAT 1 cut(s) 764
EgeI GGCGCC 1 cut(s) 221
EheI GGCGCC 1 cut(s) 221
ErhI CCWWGG 2 cut(s) 578, 1346
FaeI CATG 5 cut(s) 424, 582, 762, 1081, 1343
FaqI GGGAC 2 cut(s) 111, 796
FatI CATG 5 cut(s) 420, 578, 758, 1077, 1339
FauI CCCGC 1 cut(s) 22
Fnu4HI GCNGC 5 cut(s) 54, 182, 237, 484, 933
FokI GGATG 4 cut(s) 975, 983, 1019, 1165
Fsp4HI GCNGC 5 cut(s) 54, 182, 237, 484, 933
FspBI CTAG 5 cut(s) 464, 735, 906, 1112, 1295
GlaI GCGC 2 cut(s) 221, 1127
GluI GCNGC 5 cut(s) 54, 182, 237, 484, 933
GsuI CTGGAG 2 cut(s) 229, 771
HaeII RGCGCY 1 cut(s) 223
HaeIII GGCC 3 cut(s) 326, 1084, 1139
HapII CCGG 2 cut(s) 43, 108
HhaI GCGC 2 cut(s) 222, 1128
Hin1I GRCGYC 1 cut(s) 220
Hin1II CATG 5 cut(s) 424, 582, 762, 1081, 1343
Hin6I GCGC 2 cut(s) 220, 1126
HinP1I GCGC 2 cut(s) 220, 1126
HinfI GANTC 6 cut(s) 398, 460, 471, 646, 784, 1015
HpaII CCGG 2 cut(s) 43, 108
HphI GGTGA 2 cut(s) 1185, 1359
Hpy166II GTNNAC 3 cut(s) 847, 1285, 1367
Hpy188I TCNGA 9 cut(s) 91, 120, 232, 607, 640, 832, 1055, 1230, 1302
Hpy188III TCNNGA 4 cut(s) 146, 421, 735, 992
Hpy8I GTNNAC 3 cut(s) 847, 1285, 1367
Hpy99I CGWCG 1 cut(s) 85
HpyAV CCTTC 8 cut(s) 61, 233, 563, 883, 1095, 1300, 1309, 1380
HpyCH4III ACNGT 3 cut(s) 337, 1197, 1289
HpyCH4IV ACGT 2 cut(s) 17, 150
HpyCH4V TGCA 9 cut(s) 125, 181, 215, 239, 344, 486, 762, 935, 1049
HpyF10VI GCNNNNNNNGC 2 cut(s) 938, 1046
HpyF3I CTNAG 7 cut(s) 209, 300, 475, 639, 804, 1236, 1277
HpySE526I ACGT 2 cut(s) 17, 150
Hsp92I GRCGYC 1 cut(s) 220
Hsp92II CATG 5 cut(s) 424, 582, 762, 1081, 1343
HspAI GCGC 2 cut(s) 220, 1126
KasI GGCGCC 1 cut(s) 219
Kzo9I GATC 7 cut(s) 47, 429, 799, 921, 982, 1262, 1342
LmnI GCTCC 3 cut(s) 248, 778, 1303
Lsp1109I GCAGC 5 cut(s) 40, 193, 223, 470, 919
LweI GCATC 5 cut(s) 953, 997, 1046, 1175, 1187
MaeI CTAG 5 cut(s) 464, 735, 906, 1112, 1295
MaeII ACGT 2 cut(s) 17, 150
MaeIII GTNAC 1 cut(s) 1355
MalI GATC 7 cut(s) 49, 431, 801, 923, 984, 1264, 1344
MboI GATC 7 cut(s) 47, 429, 799, 921, 982, 1262, 1342
MboII GAAGA 3 cut(s) 173, 1118, 1252
MfeI CAATTG 1 cut(s) 597
MflI RGATCY 2 cut(s) 47, 799
MluCI AATT 4 cut(s) 289, 597, 752, 925
MluI ACGCGT 1 cut(s) 7
Mly113I GGCGCC 1 cut(s) 220
MlyI GAGTC 4 cut(s) 392, 465, 778, 1009
Mph1103I ATGCAT 1 cut(s) 764
MroXI GAANNNNTTC 1 cut(s) 573
MseI TTAA 6 cut(s) 20, 197, 267, 387, 1029, 1352
MslI CAYNNNNRTG 2 cut(s) 360, 1054
MspA1I CMGCKG 2 cut(s) 53, 208
MspI CCGG 2 cut(s) 43, 108
MspR9I CCNGG 2 cut(s) 44, 789
MunI CAATTG 1 cut(s) 597
Mva1269I GAATGC 2 cut(s) 127, 1049
MvaI CCWGG 1 cut(s) 789
MvnI CGCG 1 cut(s) 9
MwoI GCNNNNNNNGC 2 cut(s) 938, 1046
NarI GGCGCC 1 cut(s) 220
NciI CCSGG 1 cut(s) 44
NcoI CCATGG 1 cut(s) 578
NdeII GATC 7 cut(s) 47, 429, 799, 921, 982, 1262, 1342
NlaIII CATG 5 cut(s) 424, 582, 762, 1081, 1343
NlaIV GGNNCC 4 cut(s) 49, 221, 244, 325
NmeAIII GCCGAG 2 cut(s) 5, 1066
NmuCI GTSAC 1 cut(s) 1355
NsiI ATGCAT 1 cut(s) 764
PagI TCATGA 1 cut(s) 420
PceI AGGCCT 1 cut(s) 1084
PctI GAATGC 2 cut(s) 127, 1049
PdmI GAANNNNTTC 1 cut(s) 573
PfeI GAWTC 2 cut(s) 460, 646
Pfl23II CGTACG 1 cut(s) 10
PflFI GACNNNGTC 1 cut(s) 416
PkrI GCNGC 5 cut(s) 55, 183, 238, 485, 934
PleI GAGTC 4 cut(s) 392, 465, 778, 1009
PluTI GGCGCC 1 cut(s) 223
PpsI GAGTC 4 cut(s) 392, 465, 778, 1009
Psp6I CCWGG 1 cut(s) 787
PspGI CCWGG 1 cut(s) 787
PspLI CGTACG 1 cut(s) 10
PspN4I GGNNCC 4 cut(s) 49, 221, 244, 325
PspPI GGNCC 3 cut(s) 324, 582, 1137
PstI CTGCAG 1 cut(s) 241
PsuI RGATCY 2 cut(s) 47, 799
PsyI GACNNNGTC 1 cut(s) 416
PvuII CAGCTG 1 cut(s) 208
RsaI GTAC 6 cut(s) 12, 139, 319, 334, 809, 1338
RsaNI GTAC 6 cut(s) 11, 138, 318, 333, 808, 1337
RseI CAYNNNNRTG 2 cut(s) 360, 1054
SaqAI TTAA 6 cut(s) 20, 197, 267, 387, 1029, 1352
SatI GCNGC 5 cut(s) 54, 182, 237, 484, 933
Sau3AI GATC 7 cut(s) 47, 429, 799, 921, 982, 1262, 1342
Sau96I GGNCC 3 cut(s) 324, 582, 1137
SchI GAGTC 4 cut(s) 392, 465, 778, 1009
ScrFI CCNGG 2 cut(s) 44, 789
SfaNI GCATC 5 cut(s) 953, 997, 1046, 1175, 1187
SfcI CTRYAG 2 cut(s) 237, 621
SfoI GGCGCC 1 cut(s) 221
SinI GGWCC 1 cut(s) 582
SmiMI CAYNNNNRTG 2 cut(s) 360, 1054
Sse9I AATT 4 cut(s) 289, 597, 752, 925
SseBI AGGCCT 1 cut(s) 1084
SsiI CCGC 4 cut(s) 29, 51, 882, 1103
SspDI GGCGCC 1 cut(s) 219
SspMI CTAG 5 cut(s) 464, 735, 906, 1112, 1295
StuI AGGCCT 1 cut(s) 1084
StyD4I CCNGG 2 cut(s) 42, 787
StyI CCWWGG 2 cut(s) 578, 1346
TaaI ACNGT 3 cut(s) 337, 1197, 1289
TaiI ACGT 2 cut(s) 20, 153
TaqI TCGA 1 cut(s) 993
TaqII GACCGA 1 cut(s) 716
TasI AATT 4 cut(s) 289, 597, 752, 925
TatI WGTACW 1 cut(s) 1336
TfiI GAWTC 2 cut(s) 460, 646
Tru1I TTAA 6 cut(s) 20, 197, 267, 387, 1029, 1352
Tru9I TTAA 6 cut(s) 20, 197, 267, 387, 1029, 1352
TscAI CASTG 3 cut(s) 253, 1135, 1179
TseFI GTSAC 1 cut(s) 1355
TseI GCWGC 5 cut(s) 53, 181, 236, 483, 932
Tsp45I GTSAC 1 cut(s) 1355
TspDTI ATGAA 8 cut(s) 378, 437, 531, 659, 902, 987, 1179, 1319
TspGWI ACGGA 3 cut(s) 28, 436, 1218
TspRI CASTG 3 cut(s) 253, 1135, 1179
Tth111I GACNNNGTC 1 cut(s) 416
VpaK11BI GGWCC 1 cut(s) 582
XbaI TCTAGA 1 cut(s) 734
XmnI GAANNNNTTC 1 cut(s) 573
XspI CTAG 5 cut(s) 464, 735, 906, 1112, 1295
Zsp2I ATGCAT 1 cut(s) 764
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.