Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0008561

Physical Location & Seq

Genomic Coordinates Reverse (-)

44518300 .. 44521833

Gene Structure 3534 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1366600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2172 bp

ATGGCAGATATGGCAAAGTACAAGGTGAGAAATGAATTGGGTTGTGGTTTTATGGGTGGGATTTTCCAGTGCAGAAGCTACTGGCCTAGAAAATCATCTGTTCATTCACTACCTTCCTCAAACACTAGCAAAAATGATTTCAATCTACCAGTCAGTGATGATTGTTCTTCAAAGTCTAATGAATCAAAGACCCAACCAACCAAACCCACACAGCGTAGTGCTACTGTAATCTCCTTGAATTTGGGTAAACCTTCTCCCAATTTCGACTTGGAACACGCCAGGAAGCCTAGCTTGGGCCATCCAAGCCCTTCAGCTTGCCACCAAAAGGTTCAACCAAGAAGACATTCAGATGCTGCAAGAAGCTCGACTTCTTCATCCAGTGGAGCAGGGCAGATCAAGGTGTCACAGCAGCATGACTTGGCGAAAGAGATGAAGCTACGAAGGGCGTCCACTGCTGGCTCTGCAGAGCTCAGTAAGAAGATCAGTGATCACCAGCAAACCAACGAAAGCAAAGCTGTAGTCCGAGCCACTTCAAGTAGCTTAATTTTTACAGGACAGGGGAGGAACCTGAGGCAGCCCGGCGTTACCAATCAGAGAGCAAGCAATAGTCCCAGTGCCATTTCAATCAAAACTCTGGCTTATCATCCTAGAAACGTAGAAGACTCGAGTTCCACACCTAACCGAAAACTAGGAAGCAATGTTGTGATGGGAATCATTGTGAGGAAAAACAGTGATGATTTTGGAGGCATGGCATTGAATAAGTTAGACCCTGAGGTGTTGAAGTCCATGGGGAACGAGGCATACAAGGAGGACAGATTTGAAGAGGCCTTGGCTTTGTATGATCGTGCAATTGCGTTGGATTCAAACAAGGCAGCGTACTATAGCAACAAGGGAGCAGCCTTGATTGGTTTAGGCCATCTCATTGAGGCGGTTTTCGAGTGTAAAGAAGCAATCCAGATTGAACCCTCTTACCACAAAGCTCATCATCGGTTGGCAACAACATATCTCAGACTGGGAAAAGCAGAGAAAGCATTGGATCACTACAAACACTCGGGTCCATACGCTAAATCGAAAGACGTTGACCAATGTCAGGTTCTTCAAAAATGCCTCAGCAGGTGCACTGAAGCTCAGAAATTACAAGAGTGGAATGTTTTGCTCAATGAAACCCAACTAGCAATTTCCTCAGGTGCCAATTCAGCTCCACAGGTGTTTGCTCTACAAGCTGAGGCCTTGCTGAAGCTTCAAAGACAACAAGAGGCCTATGCCACCTACCAAAAACGACCCAGTTTTGGCATTGATATTTGCACCAAATTTTTTGGCATGGCTAGTAGTGCCTATCTGTTAATGATTGGAGCTCAGGTTTACTTGGCTGCTGGCAGGTTTGAGGACGCGGTAGGTACAGCTACAAATGCAGCATGGCTCAATCCAGGTGACAAGAACGTCGGTATGGTGGTGAAGAGGGCTAGAGCTGTTGCGTCAGCCCGAGTGAGTGGTAACCTTCTCTTCAAGGCATCAAAGTTTTCGGAAGCGTGTGTAGTATATGGCCAAGGACTACAGCACGATCCACACAATTCGGTTTTACGATGCAATAGAGCAGCTTGTCGTTCTAAGCTTGGGCAATTTGAAAAGGCCATCGAAGATTGCAATGCAGCACTCGATCTGCAGCCTTCTTATAGCAAGGCCAGGCTGCGCCGCGCTGATTGCAACGCCAAGTTGGAGAGGTGGGGAGCTTCAATTCCAGATTATGAGATGCTGATAAGGGAAACTCCTGGAGATGAGGAAGTTGGAAAGGCTTTGTTTGAAGCCAAAATCCAGCTCAAAAGACAACATGGCGAAGATATTGAAGACGCGAAATTCGGATCAAACTTGGTTCTTGTTTCCAGCAATGAGCGTTTCAGATACTTTGTGACATCCCCAGGGATGTCTGTCGTGCTGTTTTGTAACAAAAGTAAACAAATGAAAGTGTTACAAGCCCTGCACCAAGTCTCCAAAAGATTCCCATCTGTTAATTTTCTCAAGGTGGAGGTGGAAGACCATCCCTACATGGCCAAAATGGAGGATGTGAGCACAATCCCAGCATTCAAGATATACAAAAATGGATCAAGGGTCAAAGAAATTCCAGGCAAAAACCATGAACAATTAGAAAGCTCAGTCAAATTGTACAGCAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0007275 GO:0007389 GO:0008150 GO:0009628 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009741 GO:0009742 GO:0009755 GO:0009987 GO:0010033 GO:0010051 GO:0010305 GO:0014070 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0042221 GO:0043401 GO:0048545 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_1 TPR_11 TPR_16 TPR_17 TPR_2 TPR_7 TPR_8 Thioredoxin

Protein Analysis

724

Amino Acids

79.73

Weight (kDa)

9.4

Isoelectric Point (pI)

46.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_11	PF13414	264 - 305	3.3e-06	TPR repeat
TPR_1	PF00515	528 - 558	1.4e-07	Tetratricopeptide repeat
Thioredoxin	PF00085	646 - 718	2e-07	Thioredoxin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008561)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78120 AT1G78120
fragaria_vesca	FvH4_5g37700 FvH4_5g37700 FvH4_5g37700 FvH4_5g37700 FvH4_5g37700
malus_domestica	MD08G1181000.v1.1 MD15G1366600.v1.1
prunus_persica	Prupe.1G514500_v2.0.a1 Prupe.1G514500_v2.0.a1 Prupe.1G514500_v2.0.a1
pyrus_communis	pycom08g15470 pycom15g32870
rosa_chinensis	RchiOBHm_Chr7g0239431
rosa_laevigata	RLG00000000758
rosa_roxburghii	Rroxscaffold_3G00220960
rosa_rugosa	Rorug07G0327800
rosa_samantha	Rh7AG481300 Rh7BG453800 Rh7CG499200 Rh7DG467300
rosa_wichuraiana	Rw7G040320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1104
AasI	GACNNNNNNGTC	1 cut(s)	1439
Acc36I	ACCTGC	2 cut(s)	1104, 1368
AccB1I	GGYRCC	1 cut(s)	1187
AccII	CGCG	3 cut(s)	1391, 1695, 1850
AciI	CCGC	3 cut(s)	929, 1391, 1693
AclWI	GGATC	4 cut(s)	1044, 1556, 1867, 2107
AcoI	YGGCCR	2 cut(s)	1543, 2046
AcsI	RAATTY	4 cut(s)	238, 1310, 1853, 2115
AcuI	CTGAAG	3 cut(s)	294, 1143, 1256
AcyI	GRCGYC	1 cut(s)	446
AfaI	GTAC	4 cut(s)	20, 878, 1399, 2162
AfiI	CCNNNNNNNGG	4 cut(s)	293, 325, 1090, 1289
AjnI	CCWGG	6 cut(s)	278, 1426, 1682, 1768, 1915, 2119
AjuI	GAANNNNNNNTTGG	6 cut(s)	275, 307, 328, 360, 1077, 1109
Alw21I	GWGCWC	4 cut(s)	471, 1121, 1357, 2069
Alw26I	GTCTC	1 cut(s)	1990
Alw44I	GTGCAC	1 cut(s)	1117
AlwI	GGATC	4 cut(s)	1044, 1556, 1867, 2107
AlwNI	CAGNNNCTG	1 cut(s)	353
Ama87I	CYCGRG	3 cut(s)	664, 1051, 1482
ApaLI	GTGCAC	1 cut(s)	1117
ApoI	RAATTY	4 cut(s)	238, 1310, 1853, 2115
ArsI	GACNNNNNNTTYG	4 cut(s)	504, 536, 1838, 1870
Asp700I	GAANNNNTTC	1 cut(s)	343
AspLEI	GCGC	2 cut(s)	1692, 1697
AspS9I	GGNCC	2 cut(s)	295, 1055
AsuC2I	CCSGG	1 cut(s)	579
AsuHPI	GGTGA	4 cut(s)	37, 482, 1442, 1465
AvaI	CYCGRG	3 cut(s)	664, 1051, 1482
AvaII	GGWCC	1 cut(s)	1055
AxyI	CCTNAGG	3 cut(s)	569, 771, 1183
BaeGI	GKGCMC	1 cut(s)	1121
BalI	TGGCCA	2 cut(s)	1545, 2048
BanI	GGYRCC	1 cut(s)	1187
BanII	GRGCYC	2 cut(s)	471, 1357
BbsI	GAAGAC	4 cut(s)	346, 666, 1851, 2037
Bbv12I	GWGCWC	4 cut(s)	471, 1121, 1357, 2069
BbvCI	CCTCAGC	2 cut(s)	1109, 1224
BccI	CCATC	6 cut(s)	306, 700, 924, 1640, 2008, 2043
BcgI	CGANNNNNNTGC	2 cut(s)	345, 379
BciT130I	CCWGG	6 cut(s)	280, 1428, 1684, 1770, 1917, 2121
BclI	TGATCA	1 cut(s)	487
BcnI	CCSGG	1 cut(s)	579
BcoDI	GTCTC	1 cut(s)	1990
BfaI	CTAG	8 cut(s)	87, 126, 288, 648, 689, 1172, 1326, 1464
BfmI	CTRYAG	5 cut(s)	462, 516, 880, 1553, 1661
BfuAI	ACCTGC	2 cut(s)	1104, 1368
Bme1390I	CCNGG	7 cut(s)	280, 579, 1428, 1684, 1770, 1917, 2121
Bme18I	GGWCC	1 cut(s)	1055
BmeT110I	CYCGRG	3 cut(s)	664, 1051, 1482
BmgT120I	GGNCC	2 cut(s)	295, 1055
BmiI	GGNNCC	3 cut(s)	566, 1056, 1189
BmrFI	CCNGG	7 cut(s)	280, 579, 1428, 1684, 1770, 1917, 2121
BmrI	ACTGGG	3 cut(s)	606, 1022, 1278
BmsI	GCATC	4 cut(s)	340, 1520, 1574, 1740
BmuI	ACTGGG	3 cut(s)	606, 1022, 1278
BoxI	GACNNNNGTC	1 cut(s)	1086
BpiI	GAAGAC	4 cut(s)	346, 666, 1851, 2037
BpmI	CTGGAG	1 cut(s)	1791
Bpu10I	CCTNAGC	3 cut(s)	1109, 1224, 1356
BpuEI	CTTGAG	1 cut(s)	2000
BpuMI	CCSGG	1 cut(s)	579
BsaBI	GATNNNNATC	3 cut(s)	141, 710, 1999
BsaHI	GRCGYC	1 cut(s)	446
BsaJI	CCNNGG	5 cut(s)	786, 828, 1546, 1915, 1916
BsaXI	ACNNNNNCTCC	4 cut(s)	1344, 1374, 1970, 2000
Bsc4I	CCNNNNNNNGG	4 cut(s)	293, 325, 1090, 1289
Bse1I	ACTGG	7 cut(s)	67, 86, 149, 378, 612, 1017, 1284
Bse21I	CCTNAGG	3 cut(s)	569, 771, 1183
Bse3DI	GCAATG	3 cut(s)	703, 1651, 1891
Bse8I	GATNNNNATC	3 cut(s)	141, 710, 1999
BseBI	CCWGG	6 cut(s)	280, 1428, 1684, 1770, 1917, 2121
BseDI	CCNNGG	5 cut(s)	786, 828, 1546, 1915, 1916
BseGI	GGATG	7 cut(s)	298, 374, 643, 1910, 1926, 2035, 2065
BseJI	GATNNNNATC	3 cut(s)	141, 710, 1999
BseLI	CCNNNNNNNGG	4 cut(s)	293, 325, 1090, 1289
BseMI	GCAATG	3 cut(s)	703, 1651, 1891
BseNI	ACTGG	7 cut(s)	67, 86, 149, 378, 612, 1017, 1284
BseSI	GKGCMC	1 cut(s)	1121
BseYI	CCCAGC	1 cut(s)	2074
BsgI	GTGCAG	2 cut(s)	91, 1961
Bsh1236I	CGCG	3 cut(s)	1391, 1695, 1850
BshNI	GGYRCC	1 cut(s)	1187
BsiHKAI	GWGCWC	4 cut(s)	471, 1121, 1357, 2069
BsiHKCI	CYCGRG	3 cut(s)	664, 1051, 1482
BsiSI	CCGG	1 cut(s)	579
BslFI	GGGAC	1 cut(s)	594
BslI	CCNNNNNNNGG	4 cut(s)	293, 325, 1090, 1289
BsmAI	GTCTC	1 cut(s)	1990
BsmFI	GGGAC	1 cut(s)	594
BsmI	GAATGC	1 cut(s)	2078
BsoBI	CYCGRG	3 cut(s)	664, 1051, 1482
Bsp1286I	GDGCHC	4 cut(s)	471, 1121, 1357, 2069
Bsp1407I	TGTACA	1 cut(s)	2160
Bsp143I	GATC	9 cut(s)	393, 480, 487, 841, 1036, 1561, 1657, 1859, 2099
Bsp19I	CCATGG	1 cut(s)	786
BspACI	CCGC	3 cut(s)	929, 1391, 1693
BspFNI	CGCG	3 cut(s)	1391, 1695, 1850
BspLI	GGNNCC	3 cut(s)	566, 1056, 1189
BspMAI	CTGCAG	2 cut(s)	466, 1665
BspMI	ACCTGC	2 cut(s)	1104, 1368
BspPI	GGATC	4 cut(s)	1044, 1556, 1867, 2107
BspT107I	GGYRCC	1 cut(s)	1187
BsrDI	GCAATG	3 cut(s)	703, 1651, 1891
BsrGI	TGTACA	1 cut(s)	2160
BsrI	ACTGG	7 cut(s)	67, 86, 149, 378, 612, 1017, 1284
BssECI	CCNNGG	5 cut(s)	786, 828, 1546, 1915, 1916
BssMI	GATC	9 cut(s)	393, 480, 487, 841, 1036, 1561, 1657, 1859, 2099
BssNI	GRCGYC	1 cut(s)	446
BssT1I	CCWWGG	3 cut(s)	786, 828, 1546
Bst2UI	CCWGG	6 cut(s)	280, 1428, 1684, 1770, 1917, 2121
Bst4CI	ACNGT	2 cut(s)	226, 731
Bst6I	CTCTTC	3 cut(s)	816, 1451, 1508
BstACI	GRCGYC	1 cut(s)	446
BstAUI	TGTACA	1 cut(s)	2160
BstC8I	GCNNGC	4 cut(s)	316, 457, 601, 1375
BstDSI	CCRYGG	1 cut(s)	786
BstEII	GGTNACC	1 cut(s)	1493
BstF5I	GGATG	7 cut(s)	298, 374, 643, 1910, 1926, 2035, 2065
BstFNI	CGCG	3 cut(s)	1391, 1695, 1850
BstHHI	GCGC	2 cut(s)	1692, 1697
BstKTI	GATC	9 cut(s)	396, 483, 490, 844, 1039, 1564, 1660, 1862, 2102
BstMAI	GTCTC	1 cut(s)	1990
BstMBI	GATC	9 cut(s)	393, 480, 487, 841, 1036, 1561, 1657, 1859, 2099
BstNI	CCWGG	6 cut(s)	280, 1428, 1684, 1770, 1917, 2121
BstPAI	GACNNNNGTC	1 cut(s)	1086
BstPI	GGTNACC	1 cut(s)	1493
BstSCI	CCNGG	7 cut(s)	278, 577, 1426, 1682, 1768, 1915, 2119
BstSFI	CTRYAG	5 cut(s)	462, 516, 880, 1553, 1661
BstSLI	GKGCMC	1 cut(s)	1121
BstUI	CGCG	3 cut(s)	1391, 1695, 1850
BstV2I	GAAGAC	4 cut(s)	346, 666, 1851, 2037
Bsu36I	CCTNAGG	3 cut(s)	569, 771, 1183
BtgI	CCRYGG	1 cut(s)	786
BtsCI	GGATG	7 cut(s)	298, 374, 643, 1910, 1926, 2035, 2065
BtsI	GCAGTG	1 cut(s)	450
BtsIMutI	CAGTG	8 cut(s)	74, 160, 385, 450, 490, 619, 736, 1119
BveI	ACCTGC	2 cut(s)	1104, 1368
Cac8I	GCNNGC	4 cut(s)	316, 457, 601, 1375
CaiI	CAGNNNCTG	1 cut(s)	353
CfoI	GCGC	2 cut(s)	1692, 1697
Cfr13I	GGNCC	2 cut(s)	295, 1055
CseI	GACGC	4 cut(s)	435, 1397, 1464, 1856
Csp6I	GTAC	4 cut(s)	19, 877, 1398, 2161
CviAII	CATG	8 cut(s)	413, 748, 787, 1321, 1416, 1829, 2044, 2132
CviQI	GTAC	4 cut(s)	19, 877, 1398, 2161
DpnI	GATC	9 cut(s)	395, 482, 489, 843, 1038, 1563, 1659, 1861, 2101
DpnII	GATC	9 cut(s)	393, 480, 487, 841, 1036, 1561, 1657, 1859, 2099
DrdI	GACNNNNNNGTC	1 cut(s)	1439
DseDI	GACNNNNNNGTC	1 cut(s)	1439
EaeI	YGGCCR	2 cut(s)	1543, 2046
Eam1104I	CTCTTC	3 cut(s)	816, 1451, 1508
EarI	CTCTTC	3 cut(s)	816, 1451, 1508
Ecl136II	GAGCTC	2 cut(s)	469, 1355
Eco130I	CCWWGG	3 cut(s)	786, 828, 1546
Eco147I	AGGCCT	3 cut(s)	827, 1229, 1259
Eco24I	GRGCYC	2 cut(s)	471, 1357
Eco47I	GGWCC	1 cut(s)	1055
Eco53kI	GAGCTC	2 cut(s)	469, 1355
Eco57I	CTGAAG	3 cut(s)	294, 1143, 1256
Eco81I	CCTNAGG	3 cut(s)	569, 771, 1183
Eco88I	CYCGRG	3 cut(s)	664, 1051, 1482
Eco91I	GGTNACC	1 cut(s)	1493
EcoICRI	GAGCTC	2 cut(s)	469, 1355
EcoO65I	GGTNACC	1 cut(s)	1493
EcoRII	CCWGG	6 cut(s)	278, 1426, 1682, 1768, 1915, 2119
EcoT14I	CCWWGG	3 cut(s)	786, 828, 1546
EcoT38I	GRGCYC	2 cut(s)	471, 1357
ErhI	CCWWGG	3 cut(s)	786, 828, 1546
FaeI	CATG	8 cut(s)	416, 751, 790, 1324, 1419, 1832, 2047, 2135
FalI	AAGNNNNNCTT	4 cut(s)	275, 307, 352, 384
FaqI	GGGAC	1 cut(s)	594
FatI	CATG	8 cut(s)	412, 747, 786, 1320, 1415, 1828, 2043, 2131
FbaI	TGATCA	1 cut(s)	487
FokI	GGATG	7 cut(s)	285, 361, 630, 1897, 1933, 2022, 2072
FriOI	GRGCYC	2 cut(s)	471, 1357
FspBI	CTAG	8 cut(s)	87, 126, 288, 648, 689, 1172, 1326, 1464
GlaI	GCGC	2 cut(s)	1691, 1696
GsaI	CCCAGC	1 cut(s)	2078
GsuI	CTGGAG	1 cut(s)	1791
HapII	CCGG	1 cut(s)	579
HgaI	GACGC	4 cut(s)	435, 1397, 1464, 1856
HhaI	GCGC	2 cut(s)	1692, 1697
Hin1I	GRCGYC	1 cut(s)	446
Hin1II	CATG	8 cut(s)	416, 751, 790, 1324, 1419, 1832, 2047, 2135
Hin6I	GCGC	2 cut(s)	1690, 1695
HinP1I	GCGC	2 cut(s)	1690, 1695
HincII	GTYRAC	1 cut(s)	1081
HindII	GTYRAC	1 cut(s)	1081
HindIII	AAGCTT	2 cut(s)	1238, 1610
HinfI	GANTC	5 cut(s)	182, 662, 711, 860, 1995
HpaII	CCGG	1 cut(s)	579
HphI	GGTGA	4 cut(s)	37, 482, 1442, 1465
Hpy166II	GTNNAC	6 cut(s)	248, 450, 1081, 1119, 1363, 1952
Hpy188I	TCNGA	8 cut(s)	349, 524, 594, 1010, 1131, 1525, 1859, 1898
Hpy188III	TCNNGA	3 cut(s)	955, 1739, 2083
Hpy8I	GTNNAC	6 cut(s)	248, 450, 1081, 1119, 1363, 1952
Hpy99I	CGWCG	1 cut(s)	1445
HpyAV	CCTTC	6 cut(s)	123, 261, 318, 435, 1508, 1677
HpyCH4III	ACNGT	2 cut(s)	226, 731
HpyCH4IV	ACGT	3 cut(s)	654, 1077, 1440
HpySE526I	ACGT	3 cut(s)	654, 1077, 1440
Hsp92I	GRCGYC	1 cut(s)	446
Hsp92II	CATG	8 cut(s)	416, 751, 790, 1324, 1419, 1832, 2047, 2135
HspAI	GCGC	2 cut(s)	1690, 1695
Ksp22I	TGATCA	1 cut(s)	487
Kzo9I	GATC	9 cut(s)	393, 480, 487, 841, 1036, 1561, 1657, 1859, 2099
LmnI	GCTCC	5 cut(s)	383, 893, 1204, 1352, 1727
LweI	GCATC	4 cut(s)	340, 1520, 1574, 1740
MaeI	CTAG	8 cut(s)	87, 126, 288, 648, 689, 1172, 1326, 1464
MaeII	ACGT	3 cut(s)	654, 1077, 1440
MaeIII	GTNAC	7 cut(s)	402, 583, 1430, 1493, 1906, 1940, 1965
MalI	GATC	9 cut(s)	395, 482, 489, 843, 1038, 1563, 1659, 1861, 2101
MboI	GATC	9 cut(s)	393, 480, 487, 841, 1036, 1561, 1657, 1859, 2099
MfeI	CAATTG	1 cut(s)	849
MhlI	GDGCHC	4 cut(s)	471, 1121, 1357, 2069
MlsI	TGGCCA	2 cut(s)	1545, 2048
MluNI	TGGCCA	2 cut(s)	1545, 2048
MlyI	GAGTC	1 cut(s)	656
MmeI	TCCRAC	3 cut(s)	837, 1695, 1765
Mox20I	TGGCCA	2 cut(s)	1545, 2048
MroXI	GAANNNNTTC	1 cut(s)	343
MscI	TGGCCA	2 cut(s)	1545, 2048
MseI	TTAA	3 cut(s)	542, 1343, 2007
MslI	CAYNNNNRTG	1 cut(s)	348
Msp20I	TGGCCA	2 cut(s)	1545, 2048
MspI	CCGG	1 cut(s)	579
MspR9I	CCNGG	7 cut(s)	280, 579, 1428, 1684, 1770, 1917, 2121
MteI	GCGCNGCGC	1 cut(s)	1693
MunI	CAATTG	1 cut(s)	849
Mva1269I	GAATGC	1 cut(s)	2078
MvaI	CCWGG	6 cut(s)	280, 1428, 1684, 1770, 1917, 2121
MvnI	CGCG	3 cut(s)	1391, 1695, 1850
NciI	CCSGG	1 cut(s)	579
NcoI	CCATGG	1 cut(s)	786
NdeII	GATC	9 cut(s)	393, 480, 487, 841, 1036, 1561, 1657, 1859, 2099
NlaIII	CATG	8 cut(s)	416, 751, 790, 1324, 1419, 1832, 2047, 2135
NlaIV	GGNNCC	3 cut(s)	566, 1056, 1189
NmuCI	GTSAC	3 cut(s)	402, 1430, 1906
PaeR7I	CTCGAG	1 cut(s)	664
PaqCI	CACCTGC	1 cut(s)	1104
PasI	CCCWGGG	1 cut(s)	1916
PceI	AGGCCT	3 cut(s)	827, 1229, 1259
PctI	GAATGC	1 cut(s)	2078
PdmI	GAANNNNTTC	1 cut(s)	343
PfeI	GAWTC	4 cut(s)	182, 711, 860, 1995
PfoI	TCCNGGA	1 cut(s)	1768
PleI	GAGTC	1 cut(s)	656
PpsI	GAGTC	1 cut(s)	656
PshAI	GACNNNNGTC	1 cut(s)	1086
Psp124BI	GAGCTC	2 cut(s)	471, 1357
Psp6I	CCWGG	6 cut(s)	278, 1426, 1682, 1768, 1915, 2119
PspEI	GGTNACC	1 cut(s)	1493
PspFI	CCCAGC	1 cut(s)	2074
PspGI	CCWGG	6 cut(s)	278, 1426, 1682, 1768, 1915, 2119
PspN4I	GGNNCC	3 cut(s)	566, 1056, 1189
PspPI	GGNCC	2 cut(s)	295, 1055
PspXI	VCTCGAGB	1 cut(s)	664
PsrI	GAACNNNNNNTAC	2 cut(s)	785, 817
PstI	CTGCAG	2 cut(s)	466, 1665
PstNI	CAGNNNCTG	1 cut(s)	353
RsaI	GTAC	4 cut(s)	20, 878, 1399, 2162
RsaNI	GTAC	4 cut(s)	19, 877, 1398, 2161
RseI	CAYNNNNRTG	1 cut(s)	348
SacI	GAGCTC	2 cut(s)	471, 1357
SaqAI	TTAA	3 cut(s)	542, 1343, 2007
Sau3AI	GATC	9 cut(s)	393, 480, 487, 841, 1036, 1561, 1657, 1859, 2099
Sau96I	GGNCC	2 cut(s)	295, 1055
SchI	GAGTC	1 cut(s)	656
ScrFI	CCNGG	7 cut(s)	280, 579, 1428, 1684, 1770, 1917, 2121
SduI	GDGCHC	4 cut(s)	471, 1121, 1357, 2069
SfaNI	GCATC	4 cut(s)	340, 1520, 1574, 1740
SfcI	CTRYAG	5 cut(s)	462, 516, 880, 1553, 1661
Sfr274I	CTCGAG	1 cut(s)	664
SinI	GGWCC	1 cut(s)	1055
SlaI	CTCGAG	1 cut(s)	664
SmiMI	CAYNNNNRTG	1 cut(s)	348
SmlI	CTYRAG	2 cut(s)	664, 2015
SmoI	CTYRAG	2 cut(s)	664, 2015
SseBI	AGGCCT	3 cut(s)	827, 1229, 1259
SsiI	CCGC	3 cut(s)	929, 1391, 1693
SspMI	CTAG	8 cut(s)	87, 126, 288, 648, 689, 1172, 1326, 1464
SstI	GAGCTC	2 cut(s)	471, 1357
StuI	AGGCCT	3 cut(s)	827, 1229, 1259
StyD4I	CCNGG	7 cut(s)	278, 577, 1426, 1682, 1768, 1915, 2119
StyI	CCWWGG	3 cut(s)	786, 828, 1546
TaaI	ACNGT	2 cut(s)	226, 731
TaiI	ACGT	3 cut(s)	657, 1080, 1443
TaqI	TCGA	7 cut(s)	264, 365, 665, 936, 1070, 1635, 1656
TatI	WGTACW	2 cut(s)	18, 2160
TauI	GCSGC	1 cut(s)	1695
TfiI	GAWTC	4 cut(s)	182, 711, 860, 1995
Tru1I	TTAA	3 cut(s)	542, 1343, 2007
Tru9I	TTAA	3 cut(s)	542, 1343, 2007
TscAI	CASTG	8 cut(s)	74, 160, 385, 457, 490, 619, 736, 1126
TseFI	GTSAC	3 cut(s)	402, 1430, 1906
Tsp45I	GTSAC	3 cut(s)	402, 1430, 1906
TspDTI	ATGAA	8 cut(s)	48, 92, 195, 363, 446, 1176, 1973, 2148
TspRI	CASTG	8 cut(s)	74, 160, 385, 457, 490, 619, 736, 1126
VneI	GTGCAC	1 cut(s)	1117
VpaK11BI	GGWCC	1 cut(s)	1055
XapI	RAATTY	4 cut(s)	238, 1310, 1853, 2115
XcmI	CCANNNNNNNNNTGG	1 cut(s)	265
XhoI	CTCGAG	1 cut(s)	664
XmnI	GAANNNNTTC	1 cut(s)	343
XspI	CTAG	8 cut(s)	87, 126, 288, 648, 689, 1172, 1326, 1464

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.