Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0008561

Physical Location & Seq

Genomic Coordinates Reverse (-)

5029733 .. 5032884

Gene Structure 3152 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000000758

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2076 bp

ATGGCCAATTATAAGGTGGAGAATAATGACTTGGGTTGTGGTTTTCTATCTGGGATTTTCCAGTGCTCAAGAAAATCTCTGGTTCATTCATTACCCACCAATATTAGCCAAAATCATTTGAAGGCACCAGACAATGATGATTCCAAGAAGCCTAAAGAGTCCAAAGAAGTTTCTTTCGCCATCCCCACCAATTCGGCTAAGCCTTCTCCAAATCGAGAAGTGAAGCACACCAGAAAGCCGAGCTTGGATCATCCAAGGCCTTCTTCCACAGGTACTCACCAGAAGGTACTTCAAGCAAGAAGAAGCTCAGATGCTGGAAGAAGCTCAACATCTTCCAACGGTTCTAGGCAAATCAAGGTGTTTGTGGCGCCGGAGGAGAAAAAGATTCAGAGGGCATCTACTACCAGCCTGGCTGAGCTAAGTAGGAAGATCAATGATCACCATCAAGCCAATGACGGCAAAGCTTTAGTCCGAGCCAGTTCAGGTAGTGTCATTCATTCAGGACAGTTGGGGAACTTGAGGCTGCAGCCTGGAATTTCGAGTCTGCTAACAAGTAATAGTACTCCTAATTCCACACCAAAATGTAAAGCTGCTGTGATGGGAAACATTGTGAAGAAGAGTAGTGATGATCTTGGAGTTCTTAGTTCTGCGAATAAATTAGACCCTGAGGCTTTGAAGTCGATGGGAAATGAAGCATACAAGGAGAACAGATTCGAAGAGGCCTTGGCTTTATATGATCGAGCAATTGCTATGGATTCAAATAAGGCAGCTTATCACAGCAACAAAAGTGCTGCTTTGATTGGTTTAGGCCGCCTCATCGAGGCAGTTTTTGAATGCAAAGAAGCCATCCAGATTGAGCCTTCATATCACAAAGCTCATTATCGGCTAGCGATGGCATATCTCAGACTAGGAGAAACAGAGAAAGCATTGGATCATTACAAACTTTCGGGTCCATATGCGTATTCGAAAGACATAGATCAATGCCAGGCTCTTCAGAAATGCCTCAGCAGATGCATCGAAGCTCAGAAATTACAGGAGTGGAATGTTTTGTTAAATGAGACCCAATTGGCAATGTCTTCAGGTGCCAATTCAGCTCCACAGGTCTTTGCTCTACAAGCTGAGGCCTTGTTGAAACTTCACAGACATGAAGAGGCATATTCTACCTACCAGAACAGACCAAATTTCAGCATTATTTTGTGCACTAAATTCTTTGGCATGGCAATCAGTGCTTATCTGTTAATGATTGGTGCACAAGTTTACTTGGCTGCTGGCAGATTTGAAGATGCAATGGCAGCCGCTCAACAGGCAGCACGACTCAATCCGGGTCACAAGGAAATTGGCACAGTGGTGAAGAGGGCTAGAACTGTTGCATCAGCCCGATCGAGTGGTAACCTTCTCTTCAAGGCATCAAAATTCACAGAAGCGAGTGTAGTGTATAGCCAAGGATTAGAGCAGGATCCATACAACTCGGTTTTGCTATGCAATCGAGCAGCTTGTCGTTCTAAGCTAGGCCAATATGAAAAGGCTGTTGAAGATTGCACTGCAGCTCTTAATCTGCAGCCTTGTTATAGCAAGGCTAGGCTGCGACGGGCTGATTGCAATGCCAAGTTAGAGAGGTGGGGAGCTTCAATTAAAGATTATGAGGTGTTGATAAGAGAAACTCCAGGAGATGAAGAAGTGGGGAAGGCTTTGTTTGAAGCCCAAATCCAGCTAAAAAGACAACATGGTGAAGATATTGGGGACATGAAATTTGGATCAAATTTTATTTCCGTTGCCAACAATGAGCGTTTCAGACACTATGTGACCTCTCCAGGGATGTCAGTGGTGCTCTTCTGTAGCAAAACTAGACAGAAGCAAGTGTCGCAATCCCTGGAACAAGTCTGCAAAAGATTCCCTTCTGTTAACTTCCTCAAGGTGGAGGTAGAAGACCACCCGTACTTGGCAAAACTGGAGGACGTGAGCACCATCCCAGCCTTCAAGATATACAAAAATGGATCAAGGGTCAAAGAAATTCCAGGCAACCACCATGAATTATTAGAAAGCTCAGTCAAATTATACAGCGGTTCAGGATTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0007275 GO:0007389 GO:0008150 GO:0009628 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009741 GO:0009742 GO:0009755 GO:0009987 GO:0010033 GO:0010051 GO:0010305 GO:0014070 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0042221 GO:0043401 GO:0048545 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_1 TPR_11 TPR_16 TPR_2 TPR_7 TPR_8 Thioredoxin

Protein Analysis

692

Amino Acids

76.23

Weight (kDa)

9.24

Isoelectric Point (pI)

43.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_17	PF13431	479 - 510	9.5e-06	Tetratricopeptide repeat
TPR_1	PF00515	492 - 521	2.9e-06	Tetratricopeptide repeat
Thioredoxin	PF00085	592 - 680	9.2e-07	Thioredoxin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008561)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78120 AT1G78120
fragaria_vesca	FvH4_5g37700 FvH4_5g37700 FvH4_5g37700 FvH4_5g37700 FvH4_5g37700
malus_domestica	MD08G1181000.v1.1 MD15G1366600.v1.1
prunus_persica	Prupe.1G514500_v2.0.a1 Prupe.1G514500_v2.0.a1 Prupe.1G514500_v2.0.a1
pyrus_communis	pycom08g15470 pycom15g32870
rosa_chinensis	RchiOBHm_Chr7g0239431
rosa_laevigata	RLG00000000758
rosa_roxburghii	Rroxscaffold_3G00220960
rosa_rugosa	Rorug07G0327800
rosa_samantha	Rh7AG481300 Rh7BG453800 Rh7CG499200 Rh7DG467300
rosa_wichuraiana	Rw7G040320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	12
AccB1I	GGYRCC	3 cut(s)	124, 367, 1082
AccBSI	CCGCTC	1 cut(s)	1298
AciI	CCGC	3 cut(s)	811, 1296, 2061
AclWI	GGATC	6 cut(s)	255, 939, 1451, 1464, 1762, 2002
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	7 cut(s)	534, 1180, 1205, 1412, 1748, 1759, 2010
AcuI	CTGAAG	2 cut(s)	977, 1062
AcyI	GRCGYC	1 cut(s)	368
AdeI	CACNNNGTG	1 cut(s)	1801
AfaI	GTAC	4 cut(s)	274, 288, 562, 1937
AfiI	CCNNNNNNNGG	4 cut(s)	820, 1812, 1915, 1939
AjiI	CACGTC	1 cut(s)	1957
AjnI	CCWGG	7 cut(s)	408, 529, 984, 1663, 1810, 1869, 2014
AjuI	GAANNNNNNNTTGG	4 cut(s)	14, 46, 247, 279
AleI	CACNNNNGTG	1 cut(s)	1346
Alw21I	GWGCWC	5 cut(s)	68, 1202, 1252, 1830, 1964
Alw26I	GTCTC	1 cut(s)	1052
Alw44I	GTGCAC	2 cut(s)	1198, 1248
AlwI	GGATC	6 cut(s)	255, 939, 1451, 1464, 1762, 2002
AlwNI	CAGNNNCTG	1 cut(s)	314
AoxI	GGCC	6 cut(s)	3, 257, 720, 808, 1122, 1510
ApaLI	GTGCAC	2 cut(s)	1198, 1248
ApoI	RAATTY	7 cut(s)	534, 1180, 1205, 1412, 1748, 1759, 2010
ArsI	GACNNNNNNTTYG	4 cut(s)	453, 485, 1733, 1765
Asp700I	GAANNNNTTC	1 cut(s)	710
AspLEI	GCGC	1 cut(s)	370
AspS9I	GGNCC	1 cut(s)	950
AsuC2I	CCSGG	1 cut(s)	1323
AsuHPI	GGTGA	4 cut(s)	269, 431, 1360, 1739
AsuII	TTCGAA	2 cut(s)	714, 965
AsuNHI	GCTAGC	1 cut(s)	886
AvaII	GGWCC	1 cut(s)	950
AxyI	CCTNAGG	1 cut(s)	666
BaeGI	GKGCMC	2 cut(s)	1202, 1252
BalI	TGGCCA	1 cut(s)	5
BamHI	GGATCC	1 cut(s)	1456
BanI	GGYRCC	3 cut(s)	124, 367, 1082
BbsI	GAAGAC	2 cut(s)	1068, 1932
Bbv12I	GWGCWC	5 cut(s)	68, 1202, 1252, 1830, 1964
BbvCI	CCTCAGC	2 cut(s)	1004, 1119
BccI	CCATC	7 cut(s)	188, 450, 592, 676, 854, 886, 1973
BceAI	ACGGC	1 cut(s)	472
BcgI	CGANNNNNNTGC	2 cut(s)	997, 1031
BciT130I	CCWGG	7 cut(s)	410, 531, 986, 1665, 1812, 1871, 2016
BclI	TGATCA	1 cut(s)	436
BcnI	CCSGG	1 cut(s)	1323
BcoDI	GTCTC	1 cut(s)	1052
BfaI	CTAG	7 cut(s)	345, 887, 908, 1359, 1508, 1578, 1845
BfmI	CTRYAG	4 cut(s)	524, 1542, 1556, 1834
BfoI	RGCGCY	1 cut(s)	371
BlpI	GCTNAGC	2 cut(s)	198, 414
BmcAI	AGTACT	1 cut(s)	562
Bme1390I	CCNGG	8 cut(s)	410, 531, 986, 1323, 1665, 1812, 1871, 2016
Bme18I	GGWCC	1 cut(s)	950
BmgBI	CACGTC	1 cut(s)	1957
BmgT120I	GGNCC	1 cut(s)	950
BmiI	GGNNCC	5 cut(s)	126, 369, 951, 1084, 1458
BmrFI	CCNGG	8 cut(s)	410, 531, 986, 1323, 1665, 1812, 1871, 2016
BmsI	GCATC	7 cut(s)	301, 404, 1001, 1023, 1273, 1379, 1415
BmtI	GCTAGC	1 cut(s)	890
BpiI	GAAGAC	2 cut(s)	1068, 1932
BpmI	CTGGAG	3 cut(s)	1647, 1794, 1970
Bpu10I	CCTNAGC	2 cut(s)	1004, 1119
Bpu1102I	GCTNAGC	2 cut(s)	198, 414
Bpu14I	TTCGAA	2 cut(s)	714, 965
BpuEI	CTTGAG	3 cut(s)	52, 538, 1895
BpuMI	CCSGG	1 cut(s)	1323
BsaBI	GATNNNNATC	1 cut(s)	441
BsaHI	GRCGYC	1 cut(s)	368
BsaI	GGTCTC	1 cut(s)	1052
BsaJI	CCNNGG	5 cut(s)	254, 723, 1441, 1811, 1869
Bsc4I	CCNNNNNNNGG	4 cut(s)	820, 1812, 1915, 1939
Bse1I	ACTGG	3 cut(s)	61, 477, 1953
Bse21I	CCTNAGG	1 cut(s)	666
Bse3DI	GCAATG	3 cut(s)	1077, 1293, 1606
Bse8I	GATNNNNATC	1 cut(s)	441
BseBI	CCWGG	7 cut(s)	410, 531, 986, 1665, 1812, 1871, 2016
BseDI	CCNNGG	5 cut(s)	254, 723, 1441, 1811, 1869
BseGI	GGATG	5 cut(s)	180, 250, 846, 1821, 1965
BseJI	GATNNNNATC	1 cut(s)	441
BseLI	CCNNNNNNNGG	4 cut(s)	820, 1812, 1915, 1939
BseMI	GCAATG	3 cut(s)	1077, 1293, 1606
BseMII	CTCAG	8 cut(s)	321, 405, 657, 916, 1018, 1037, 1110, 2058
BseNI	ACTGG	3 cut(s)	61, 477, 1953
BseRI	GAGGAG	1 cut(s)	389
BseSI	GKGCMC	2 cut(s)	1202, 1252
BseYI	CCCAGC	1 cut(s)	1969
Bsh1285I	CGRYCG	1 cut(s)	1382
BshFI	GGCC	6 cut(s)	5, 259, 722, 810, 1124, 1512
BshNI	GGYRCC	3 cut(s)	124, 367, 1082
BsiEI	CGRYCG	1 cut(s)	1382
BsiHKAI	GWGCWC	5 cut(s)	68, 1202, 1252, 1830, 1964
BsiSI	CCGG	2 cut(s)	371, 1322
BslFI	GGGAC	1 cut(s)	1754
BslI	CCNNNNNNNGG	4 cut(s)	820, 1812, 1915, 1939
BsmAI	GTCTC	1 cut(s)	1052
BsmFI	GGGAC	1 cut(s)	1754
BsmI	GAATGC	1 cut(s)	839
BsnI	GGCC	6 cut(s)	5, 259, 722, 810, 1124, 1512
Bso31I	GGTCTC	1 cut(s)	1052
Bsp119I	TTCGAA	2 cut(s)	714, 965
Bsp1286I	GDGCHC	5 cut(s)	68, 1202, 1252, 1830, 1964
Bsp1720I	GCTNAGC	2 cut(s)	198, 414
BspACI	CCGC	3 cut(s)	811, 1296, 2061
BspANI	GGCC	6 cut(s)	5, 259, 722, 810, 1124, 1512
BspCNI	CTCAG	8 cut(s)	320, 406, 658, 915, 1017, 1036, 1111, 2057
BspLI	GGNNCC	5 cut(s)	126, 369, 951, 1084, 1458
BspMAI	CTGCAG	3 cut(s)	528, 1546, 1560
BspOI	GCTAGC	1 cut(s)	890
BspPI	GGATC	6 cut(s)	255, 939, 1451, 1464, 1762, 2002
BspQI	GCTCTTC	2 cut(s)	996, 1835
BspT104I	TTCGAA	2 cut(s)	714, 965
BspT107I	GGYRCC	3 cut(s)	124, 367, 1082
BspTNI	GGTCTC	1 cut(s)	1052
BsrBI	CCGCTC	1 cut(s)	1298
BsrDI	GCAATG	3 cut(s)	1077, 1293, 1606
BsrI	ACTGG	3 cut(s)	61, 477, 1953
BssECI	CCNNGG	5 cut(s)	254, 723, 1441, 1811, 1869
BssNI	GRCGYC	1 cut(s)	368
BssT1I	CCWWGG	3 cut(s)	254, 723, 1441
Bst2UI	CCWGG	7 cut(s)	410, 531, 986, 1665, 1812, 1871, 2016
Bst4CI	ACNGT	4 cut(s)	341, 507, 1345, 1366
Bst6I	CTCTTC	7 cut(s)	611, 711, 996, 1143, 1346, 1403, 1835
BstACI	GRCGYC	1 cut(s)	368
BstAPI	GCANNNNNTGC	1 cut(s)	1226
BstBI	TTCGAA	2 cut(s)	714, 965
BstC8I	GCNNGC	2 cut(s)	888, 1270
BstEII	GGTNACC	1 cut(s)	1388
BstENI	CCTNNNNNAGG	1 cut(s)	818
BstF5I	GGATG	5 cut(s)	180, 250, 846, 1821, 1965
BstH2I	RGCGCY	1 cut(s)	371
BstHHI	GCGC	1 cut(s)	370
BstMAI	GTCTC	1 cut(s)	1052
BstMCI	CGRYCG	1 cut(s)	1382
BstMWI	GCNNNNNNNGC	6 cut(s)	1091, 1115, 1226, 1292, 1304, 1861
BstNI	CCWGG	7 cut(s)	410, 531, 986, 1665, 1812, 1871, 2016
BstPI	GGTNACC	1 cut(s)	1388
BstSCI	CCNGG	8 cut(s)	408, 529, 984, 1321, 1663, 1810, 1869, 2014
BstSFI	CTRYAG	4 cut(s)	524, 1542, 1556, 1834
BstSLI	GKGCMC	2 cut(s)	1202, 1252
BstV2I	GAAGAC	2 cut(s)	1068, 1932
BstX2I	RGATCY	1 cut(s)	1456
BstYI	RGATCY	1 cut(s)	1456
Bsu36I	CCTNAGG	1 cut(s)	666
BsuRI	GGCC	6 cut(s)	5, 259, 722, 810, 1124, 1512
BtgZI	GCGATG	1 cut(s)	905
BtrI	CACGTC	1 cut(s)	1957
BtsCI	GGATG	5 cut(s)	180, 250, 846, 1821, 1965
BtsI	GCAGTG	1 cut(s)	1539
BtsIMutI	CAGTG	5 cut(s)	68, 1231, 1350, 1539, 1827
Cac8I	GCNNGC	2 cut(s)	888, 1270
CaiI	CAGNNNCTG	1 cut(s)	314
CfoI	GCGC	1 cut(s)	370
Cfr13I	GGNCC	1 cut(s)	950
Csp6I	GTAC	4 cut(s)	273, 287, 561, 1936
CviAII	CATG	5 cut(s)	1145, 1216, 1724, 1744, 2027
CviQI	GTAC	4 cut(s)	273, 287, 561, 1936
DinI	GGCGCC	1 cut(s)	369
DraIII	CACNNNGTG	1 cut(s)	1801
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	7 cut(s)	611, 711, 996, 1143, 1346, 1403, 1835
EarI	CTCTTC	7 cut(s)	611, 711, 996, 1143, 1346, 1403, 1835
Eco130I	CCWWGG	3 cut(s)	254, 723, 1441
Eco147I	AGGCCT	3 cut(s)	259, 722, 1124
Eco31I	GGTCTC	1 cut(s)	1052
Eco47I	GGWCC	1 cut(s)	950
Eco57I	CTGAAG	2 cut(s)	977, 1062
Eco81I	CCTNAGG	1 cut(s)	666
Eco91I	GGTNACC	1 cut(s)	1388
EcoNI	CCTNNNNNAGG	1 cut(s)	818
EcoO65I	GGTNACC	1 cut(s)	1388
EcoRII	CCWGG	7 cut(s)	408, 529, 984, 1663, 1810, 1869, 2014
EcoT14I	CCWWGG	3 cut(s)	254, 723, 1441
EcoT22I	ATGCAT	1 cut(s)	1016
EgeI	GGCGCC	1 cut(s)	369
EheI	GGCGCC	1 cut(s)	369
ErhI	CCWWGG	3 cut(s)	254, 723, 1441
FaeI	CATG	5 cut(s)	1148, 1219, 1727, 1747, 2030
FalI	AAGNNNNNCTT	8 cut(s)	227, 259, 247, 279, 778, 810, 1879, 1911
FaqI	GGGAC	1 cut(s)	1754
FatI	CATG	5 cut(s)	1144, 1215, 1723, 1743, 2026
FauNDI	CATATG	1 cut(s)	955
FbaI	TGATCA	1 cut(s)	436
FokI	GGATG	5 cut(s)	167, 237, 833, 1828, 1952
FspBI	CTAG	7 cut(s)	345, 887, 908, 1359, 1508, 1578, 1845
GlaI	GCGC	1 cut(s)	369
GsaI	CCCAGC	1 cut(s)	1973
GsuI	CTGGAG	3 cut(s)	1647, 1794, 1970
HaeII	RGCGCY	1 cut(s)	371
HaeIII	GGCC	6 cut(s)	5, 259, 722, 810, 1124, 1512
HapII	CCGG	2 cut(s)	371, 1322
HhaI	GCGC	1 cut(s)	370
Hin1I	GRCGYC	1 cut(s)	368
Hin1II	CATG	5 cut(s)	1148, 1219, 1727, 1747, 2030
Hin6I	GCGC	1 cut(s)	368
HinP1I	GCGC	1 cut(s)	368
HincII	GTYRAC	1 cut(s)	1903
HindII	GTYRAC	1 cut(s)	1903
HindIII	AAGCTT	1 cut(s)	462
HinfI	GANTC	8 cut(s)	140, 158, 385, 541, 711, 755, 1314, 1890
HpaI	GTTAAC	1 cut(s)	1903
HpaII	CCGG	2 cut(s)	371, 1322
HphI	GGTGA	4 cut(s)	269, 431, 1360, 1739
Hpy166II	GTNNAC	4 cut(s)	1200, 1250, 1258, 1903
Hpy188I	TCNGA	7 cut(s)	310, 390, 473, 905, 996, 1026, 1793
Hpy188III	TCNNGA	6 cut(s)	69, 215, 501, 850, 1978, 2067
Hpy8I	GTNNAC	4 cut(s)	1200, 1250, 1258, 1903
Hpy99I	CGWCG	1 cut(s)	1590
HpyAV	CCTTC	9 cut(s)	115, 213, 270, 277, 870, 1403, 1678, 1905, 1984
HpyCH4III	ACNGT	4 cut(s)	341, 507, 1345, 1366
HpyCH4IV	ACGT	1 cut(s)	1956
HpyF10VI	GCNNNNNNNGC	6 cut(s)	1091, 1115, 1226, 1292, 1304, 1861
HpySE526I	ACGT	1 cut(s)	1956
Hsp92I	GRCGYC	1 cut(s)	368
Hsp92II	CATG	5 cut(s)	1148, 1219, 1727, 1747, 2030
HspAI	GCGC	1 cut(s)	368
KasI	GGCGCC	1 cut(s)	367
Ksp22I	TGATCA	1 cut(s)	436
KspAI	GTTAAC	1 cut(s)	1903
LguI	GCTCTTC	2 cut(s)	996, 1835
LmnI	GCTCC	2 cut(s)	1099, 1622
LweI	GCATC	7 cut(s)	301, 404, 1001, 1023, 1273, 1379, 1415
MaeI	CTAG	7 cut(s)	345, 887, 908, 1359, 1508, 1578, 1845
MaeII	ACGT	1 cut(s)	1956
MaeIII	GTNAC	3 cut(s)	1325, 1388, 1801
MbiI	CCGCTC	1 cut(s)	1298
MfeI	CAATTG	2 cut(s)	744, 1064
MflI	RGATCY	1 cut(s)	1456
MhlI	GDGCHC	5 cut(s)	68, 1202, 1252, 1830, 1964
MlsI	TGGCCA	1 cut(s)	5
MluNI	TGGCCA	1 cut(s)	5
Mly113I	GGCGCC	1 cut(s)	368
MlyI	GAGTC	3 cut(s)	167, 550, 1308
MmeI	TCCRAC	1 cut(s)	360
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	1 cut(s)	1016
MroXI	GAANNNNTTC	1 cut(s)	710
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	5 cut(s)	1052, 1238, 1551, 1632, 1902
MslI	CAYNNNNRTG	3 cut(s)	580, 1143, 1346
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	1 cut(s)	2061
MspI	CCGG	2 cut(s)	371, 1322
MspR9I	CCNGG	8 cut(s)	410, 531, 986, 1323, 1665, 1812, 1871, 2016
MunI	CAATTG	2 cut(s)	744, 1064
Mva1269I	GAATGC	1 cut(s)	839
MvaI	CCWGG	7 cut(s)	410, 531, 986, 1665, 1812, 1871, 2016
MwoI	GCNNNNNNNGC	6 cut(s)	1091, 1115, 1226, 1292, 1304, 1861
NarI	GGCGCC	1 cut(s)	368
NciI	CCSGG	1 cut(s)	1323
NdeI	CATATG	1 cut(s)	955
NheI	GCTAGC	1 cut(s)	886
NlaIII	CATG	5 cut(s)	1148, 1219, 1727, 1747, 2030
NlaIV	GGNNCC	5 cut(s)	126, 369, 951, 1084, 1458
NmeAIII	GCCGAG	1 cut(s)	264
NmuCI	GTSAC	2 cut(s)	1325, 1801
NsiI	ATGCAT	1 cut(s)	1016
NspV	TTCGAA	2 cut(s)	714, 965
OliI	CACNNNNGTG	1 cut(s)	1346
PceI	AGGCCT	3 cut(s)	259, 722, 1124
PciSI	GCTCTTC	2 cut(s)	996, 1835
PctI	GAATGC	1 cut(s)	839
PdmI	GAANNNNTTC	1 cut(s)	710
PfeI	GAWTC	5 cut(s)	140, 385, 711, 755, 1890
PfoI	TCCNGGA	1 cut(s)	1663
Ple19I	CGATCG	1 cut(s)	1382
PleI	GAGTC	3 cut(s)	166, 549, 1308
PluTI	GGCGCC	1 cut(s)	371
PpsI	GAGTC	3 cut(s)	166, 549, 1308
PsiI	TTATAA	1 cut(s)	12
Psp6I	CCWGG	7 cut(s)	408, 529, 984, 1663, 1810, 1869, 2014
PspEI	GGTNACC	1 cut(s)	1388
PspFI	CCCAGC	1 cut(s)	1969
PspGI	CCWGG	7 cut(s)	408, 529, 984, 1663, 1810, 1869, 2014
PspN4I	GGNNCC	5 cut(s)	126, 369, 951, 1084, 1458
PspPI	GGNCC	1 cut(s)	950
PstI	CTGCAG	3 cut(s)	528, 1546, 1560
PstNI	CAGNNNCTG	1 cut(s)	314
PsuI	RGATCY	1 cut(s)	1456
PvuI	CGATCG	1 cut(s)	1382
RsaI	GTAC	4 cut(s)	274, 288, 562, 1937
RsaNI	GTAC	4 cut(s)	273, 287, 561, 1936
RseI	CAYNNNNRTG	3 cut(s)	580, 1143, 1346
SapI	GCTCTTC	2 cut(s)	996, 1835
SaqAI	TTAA	5 cut(s)	1052, 1238, 1551, 1632, 1902
Sau96I	GGNCC	1 cut(s)	950
ScaI	AGTACT	1 cut(s)	562
SchI	GAGTC	3 cut(s)	167, 550, 1308
ScrFI	CCNGG	8 cut(s)	410, 531, 986, 1323, 1665, 1812, 1871, 2016
SduI	GDGCHC	5 cut(s)	68, 1202, 1252, 1830, 1964
SfaNI	GCATC	7 cut(s)	301, 404, 1001, 1023, 1273, 1379, 1415
SfcI	CTRYAG	4 cut(s)	524, 1542, 1556, 1834
SfoI	GGCGCC	1 cut(s)	369
SfuI	TTCGAA	2 cut(s)	714, 965
SinI	GGWCC	1 cut(s)	950
SmiMI	CAYNNNNRTG	3 cut(s)	580, 1143, 1346
SmlI	CTYRAG	3 cut(s)	67, 517, 1910
SmoI	CTYRAG	3 cut(s)	67, 517, 1910
SseBI	AGGCCT	3 cut(s)	259, 722, 1124
SsiI	CCGC	3 cut(s)	811, 1296, 2061
SspDI	GGCGCC	1 cut(s)	367
SspI	AATATT	1 cut(s)	103
SspMI	CTAG	7 cut(s)	345, 887, 908, 1359, 1508, 1578, 1845
StuI	AGGCCT	3 cut(s)	259, 722, 1124
StyD4I	CCNGG	8 cut(s)	408, 529, 984, 1321, 1663, 1810, 1869, 2014
StyI	CCWWGG	3 cut(s)	254, 723, 1441
TaaI	ACNGT	4 cut(s)	341, 507, 1345, 1366
TaiI	ACGT	1 cut(s)	1959
TatI	WGTACW	1 cut(s)	560
TauI	GCSGC	2 cut(s)	813, 1298
TfiI	GAWTC	5 cut(s)	140, 385, 711, 755, 1890
Tru1I	TTAA	5 cut(s)	1052, 1238, 1551, 1632, 1902
Tru9I	TTAA	5 cut(s)	1052, 1238, 1551, 1632, 1902
TscAI	CASTG	5 cut(s)	68, 1231, 1350, 1546, 1827
TseFI	GTSAC	2 cut(s)	1325, 1801
Tsp45I	GTSAC	2 cut(s)	1325, 1801
TspGWI	ACGGA	1 cut(s)	1759
TspRI	CASTG	5 cut(s)	68, 1231, 1350, 1546, 1827
VneI	GTGCAC	2 cut(s)	1198, 1248
VpaK11BI	GGWCC	1 cut(s)	950
XagI	CCTNNNNNAGG	1 cut(s)	818
XapI	RAATTY	7 cut(s)	534, 1180, 1205, 1412, 1748, 1759, 2010
XcmI	CCANNNNNNNNNTGG	1 cut(s)	13
XmnI	GAANNNNTTC	1 cut(s)	710
XspI	CTAG	7 cut(s)	345, 887, 908, 1359, 1508, 1578, 1845
ZrmI	AGTACT	1 cut(s)	562
Zsp2I	ATGCAT	1 cut(s)	1016

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.