Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0015327

Physical Location & Seq

Genomic Coordinates Reverse (-)

49132639 .. 49134622

Gene Structure 1984 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1393900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1656 bp

ATGTGCAACCCAAAGCCTTCTTCTCCTTCCTCATTTCTCTCGACCAACAAAACCCTCTTAATCAAAACCTCCAACAAAACCATGGACGACCTTCACTCTTCTGATGTTTTTGTTGACGATGACGATCAAGAGCTCCATAGATGGCCTACTCTCTCCGAGGCTGTTCAAGAAATCAAGGCCATAGGGAAGATCTCAGGTCCATCAACCATGACAGGCCTACTTCTCTACTCAAGAGCCATGATCTCCATGCTTTTTCTGGGATACCTTGGTGAGCTTCAGCTCGCCGGAGGCTCCCTTTCAATTGGGTTTGCCAACATCACAGGCTACTCCGTCATCTCCGGCCTCGCCATGGGAATGGAACCCATCTGCGGGCAAGCGTACGGCGCCAAACAGTTGAAGCTCCTCGGCCTAACCCTTCAGAGAACCGTCCTCCTCCTCCTCTCCACCTCCCTACCCATCTCCTTCATGTGGCTCAACATGAAGAGAGTCCTCCTCTGGTGCGGCCAGGACGAAGAGATTTCCTCCGTCGCCCACACTTTCACCCTCTTCTCCATTCCTGACCTCTTCTTTCTCTCCCTTCTCCACCCCCTCAGAATTTATCTGCGCACCCAAAACATCACATTGCCAGTGACCTACTGCTCCGCCATCTCCGTCCTCCTCCACATCCCTCTAAACTTCCTCCTCGTTGTCAAATTCCAAATGGGGATTTCCGGGGTGGCCATAGCAATGGTTTGGACTAATCTCAACCTCTTCATCCTACTCTTTTCCTTCACGTACTTCTCCAATGTTTACAAGGACACGTGGGTTTGTCCCAGCGCTGATTGCCTCCGCGGCTGGTCGTCTTTGCTTGCGCTCTCTATCCCGACCTGCATCTCCGTTTGCCTCGAGTGGTGGTGGTACGAGTTCATGATAATGCTGTGCGGACTGTTAGCCAACCCAAAAGCCACCATTGCTTCAATGGGAATACTAATCCAGACTACCTCTCTTGTCTACGTGTTCCCTTCGTCGCTCAGCCTCGGCGTCTCCACGAGAGTTGGGAACTTATTGGGCGCTAAGCGACCCTCAAAAGCGCGCATTTCTATGATCGTCTCGCTCGTTTGCGCGGTGGCTTTAGGCCTTTTAGCCATGTTGTTCACAACATTGATGAGGCACCAATGGGGGAGATTCTTCACTAATGACGCGGAAATACTCAAGCTCACGGCGATTGCATTGCCGATAGCAGGGCTGTGTGAGCTCGGAAACTGCCCGCAAACCACCGCCTGCGGTGTTTTGAGGGGAAGCGCGAGACCTACGGTTGGAGCCAACATAAACTTGGGGTCATTTTACTTGGTGGGAATGCCGGTGGCGATGCTGATGGGGTTCGTGGTGAAAATGGGGTTTGCAGGGCTGTGGCTTGGATTGCTTGCAGCTCAAGGCTCTTGTGCTTTGCTCATGTTCTATGTCGTTTGCACAACAGATTGGAATCTTCAGGTCAAAAGATCAAAGGATCTCACCCAAGCTTCTTCTGCATCTGCTTCTGCAGCTTCTACAACTTCTTCGATATTACCAATATCATCCCCACCACCACCAAGTTCTGATCATAAGGATCCCAACTTGGAAGATGATGAGGTTGTCAAATCATCAGAAGCGCTGGAAACGGACCCACTTATTGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0001101 GO:0003674 GO:0005215 GO:0005381 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0005794 GO:0006810 GO:0006811 GO:0006812 GO:0006826 GO:0006855 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008324 GO:0009266 GO:0009314 GO:0009408 GO:0009416 GO:0009605 GO:0009607 GO:0009624 GO:0009628 GO:0009642 GO:0009646 GO:0009653 GO:0009719 GO:0009725 GO:0009737 GO:0010015 GO:0010033 GO:0012505 GO:0015075 GO:0015238 GO:0015318 GO:0015893 GO:0017119 GO:0022603 GO:0022622 GO:0022857 GO:0022890 GO:0030001 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0032991 GO:0033993 GO:0034220 GO:0034755 GO:0042221 GO:0042493 GO:0042592 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0046915 GO:0048364 GO:0048731 GO:0048856 GO:0048878 GO:0050789 GO:0050793 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055085 GO:0065007 GO:0065008 GO:0097305 GO:0097708 GO:0098655 GO:0098660 GO:0098662 GO:0098771 GO:0099023 GO:0099402 GO:1901700 GO:1905392 GO:1905428

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

552

Amino Acids

59.84

Weight (kDa)

7.46

Isoelectric Point (pI)

38.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MatE	PF01554	67 - 227	6.7e-36	MatE
MatE	PF01554	288 - 450	1.8e-35	MatE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0015327)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G58340
fragaria_vesca	FvH4_5g33670
malus_domestica	MD08G1209800.v1.1 MD15G1393900.v1.1
pyrus_communis	pycom08g18100 pycom15g35380
rosa_chinensis	RchiOBHm_Chr7g0232641
rosa_laevigata	RLG00000001319
rosa_multiflora	Rmu_sc0005034.1_g000008
rosa_roxburghii	Rroxscaffold_3G00228070
rosa_rugosa	Rorug07G0275900
rosa_samantha	Rh7AG430200 Rh7BG403700 Rh7CG449100 Rh7DG419900
rosa_wichuraiana	Rw7G035540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	605
Acc36I	ACCTGC	1 cut(s)	875
AccB1I	GGYRCC	2 cut(s)	383, 1149
AccI	GTMKAC	1 cut(s)	990
AccII	CGCG	5 cut(s)	831, 1072, 1103, 1181, 1283
AclWI	GGATC	3 cut(s)	1494, 1580, 1593
AcoI	YGGCCR	2 cut(s)	502, 717
AcsI	RAATTY	2 cut(s)	594, 692
AcuI	CTGAAG	3 cut(s)	260, 401, 1451
AcvI	CACGTG	1 cut(s)	801
AcyI	GRCGYC	2 cut(s)	384, 1020
AfaI	GTAC	3 cut(s)	380, 776, 899
AfeI	AGCGCT	2 cut(s)	817, 1629
AfiI	CCNNNNNNNGG	6 cut(s)	349, 368, 369, 468, 1220, 1295
AflIII	ACRYGT	2 cut(s)	798, 993
AgsI	TTSAA	4 cut(s)	167, 300, 397, 957
AjnI	CCWGG	1 cut(s)	504
AjuI	GAANNNNNNNTTGG	1 cut(s)	36
AluBI	AGCT	9 cut(s)	133, 274, 280, 400, 1195, 1234, 1409, 1499, 1523
AluI	AGCT	9 cut(s)	133, 274, 280, 400, 1195, 1234, 1409, 1499, 1523
Alw21I	GWGCWC	2 cut(s)	135, 1236
Alw26I	GTCTC	3 cut(s)	1027, 1093, 1279
AlwI	GGATC	3 cut(s)	1494, 1580, 1593
Ama87I	CYCGRG	1 cut(s)	884
Aor51HI	AGCGCT	2 cut(s)	817, 1629
AoxI	GGCC	8 cut(s)	143, 177, 214, 340, 406, 502, 717, 1114
ApeKI	GCWGC	2 cut(s)	1406, 1520
ApoI	RAATTY	2 cut(s)	594, 692
AspS9I	GGNCC	2 cut(s)	197, 1639
AsuC2I	CCSGG	1 cut(s)	712
AsuHPI	GGTGA	4 cut(s)	281, 532, 1378, 1483
AvaI	CYCGRG	1 cut(s)	884
AvaII	GGWCC	2 cut(s)	197, 1639
BaeI	ACNNNNGTAYC	2 cut(s)	253, 286
BalI	TGGCCA	1 cut(s)	719
BamHI	GGATCC	1 cut(s)	1585
BanI	GGYRCC	2 cut(s)	383, 1149
BanII	GRGCYC	2 cut(s)	135, 1236
BauI	CACGAG	1 cut(s)	1027
BbrPI	CACGTG	1 cut(s)	801
Bbv12I	GWGCWC	2 cut(s)	135, 1236
BbvI	GCAGC	2 cut(s)	1418, 1532
BccI	CCATC	6 cut(s)	135, 208, 371, 464, 653, 1348
BceAI	ACGGC	2 cut(s)	397, 1215
BcgI	CGANNNNNNTGC	2 cut(s)	1192, 1226
BciT130I	CCWGG	1 cut(s)	506
BciVI	GTATCC	1 cut(s)	254
BclI	TGATCA	1 cut(s)	1576
BcnI	CCSGG	1 cut(s)	712
BcoDI	GTCTC	3 cut(s)	1027, 1093, 1279
BfmI	CTRYAG	1 cut(s)	1518
BfoI	RGCGCY	4 cut(s)	387, 819, 1053, 1631
BfuAI	ACCTGC	1 cut(s)	875
BfuI	GTATCC	1 cut(s)	254
BglI	GCCNNNNNGGC	1 cut(s)	831
BglII	AGATCT	1 cut(s)	189
BisI	GCNGC	4 cut(s)	502, 832, 1407, 1521
BlpI	GCTNAGC	2 cut(s)	1010, 1053
BlsI	GCNGC	4 cut(s)	503, 833, 1408, 1522
Bme1390I	CCNGG	2 cut(s)	506, 712
Bme18I	GGWCC	2 cut(s)	197, 1639
BmeT110I	CYCGRG	1 cut(s)	884
BmgT120I	GGNCC	2 cut(s)	197, 1639
BmiI	GGNNCC	7 cut(s)	292, 360, 385, 1151, 1300, 1587, 1641
BmrFI	CCNGG	2 cut(s)	506, 712
BmsI	GCATC	3 cut(s)	879, 1338, 1517
BplI	GAGNNNNNCTC	4 cut(s)	477, 509, 506, 538
Bpu1102I	GCTNAGC	2 cut(s)	1010, 1053
BpuEI	CTTGAG	3 cut(s)	214, 1175, 1395
BpuMI	CCSGG	1 cut(s)	712
BsaAI	YACGTR	3 cut(s)	774, 801, 994
BsaBI	GATNNNNATC	2 cut(s)	123, 1461
BsaHI	GRCGYC	2 cut(s)	384, 1020
BsaI	GGTCTC	1 cut(s)	1279
BsaJI	CCNNGG	8 cut(s)	81, 156, 265, 348, 403, 711, 829, 1015
Bsc4I	CCNNNNNNNGG	6 cut(s)	349, 368, 369, 468, 1220, 1295
Bse118I	RCCGGY	1 cut(s)	1339
Bse1I	ACTGG	1 cut(s)	626
Bse3DI	GCAATG	4 cut(s)	620, 732, 948, 1208
Bse8I	GATNNNNATC	2 cut(s)	123, 1461
BseBI	CCWGG	1 cut(s)	506
BseDI	CCNNGG	8 cut(s)	81, 156, 265, 348, 403, 711, 829, 1015
BseGI	GGATG	3 cut(s)	663, 753, 1553
BseJI	GATNNNNATC	2 cut(s)	123, 1461
BseLI	CCNNNNNNNGG	6 cut(s)	349, 368, 369, 468, 1220, 1295
BseMI	GCAATG	4 cut(s)	620, 732, 948, 1208
BseMII	CTCAG	3 cut(s)	207, 604, 1024
BseNI	ACTGG	1 cut(s)	626
BsePI	GCGCGC	1 cut(s)	1070
BseRI	GAGGAG	7 cut(s)	392, 422, 425, 428, 482, 647, 671
BseXI	GCAGC	2 cut(s)	1418, 1532
BseYI	CCCAGC	1 cut(s)	812
Bsh1236I	CGCG	5 cut(s)	831, 1072, 1103, 1181, 1283
BshFI	GGCC	8 cut(s)	145, 179, 216, 342, 408, 504, 719, 1116
BshNI	GGYRCC	2 cut(s)	383, 1149
BsiHKAI	GWGCWC	2 cut(s)	135, 1236
BsiHKCI	CYCGRG	1 cut(s)	884
BsiSI	CCGG	4 cut(s)	285, 339, 711, 1340
BsiWI	CGTACG	1 cut(s)	378
BslFI	GGGAC	1 cut(s)	795
BslI	CCNNNNNNNGG	6 cut(s)	349, 368, 369, 468, 1220, 1295
BsmAI	GTCTC	3 cut(s)	1027, 1093, 1279
BsmBI	CGTCTC	2 cut(s)	1027, 1093
BsmFI	GGGAC	1 cut(s)	795
BsmI	GAATGC	1 cut(s)	1341
BsnI	GGCC	8 cut(s)	145, 179, 216, 342, 408, 504, 719, 1116
Bso31I	GGTCTC	1 cut(s)	1279
BsoBI	CYCGRG	1 cut(s)	884
Bsp1286I	GDGCHC	2 cut(s)	135, 1236
Bsp143I	GATC	8 cut(s)	124, 189, 240, 1083, 1478, 1486, 1576, 1585
Bsp1720I	GCTNAGC	2 cut(s)	1010, 1053
Bsp19I	CCATGG	2 cut(s)	81, 348
BspANI	GGCC	8 cut(s)	145, 179, 216, 342, 408, 504, 719, 1116
BspCNI	CTCAG	3 cut(s)	206, 603, 1023
BspFNI	CGCG	5 cut(s)	831, 1072, 1103, 1181, 1283
BspHI	TCATGA	1 cut(s)	906
BspLI	GGNNCC	7 cut(s)	292, 360, 385, 1151, 1300, 1587, 1641
BspMAI	CTGCAG	1 cut(s)	1522
BspMI	ACCTGC	1 cut(s)	875
BspPI	GGATC	3 cut(s)	1494, 1580, 1593
BspT107I	GGYRCC	2 cut(s)	383, 1149
BspTNI	GGTCTC	1 cut(s)	1279
BsrDI	GCAATG	4 cut(s)	620, 732, 948, 1208
BsrFI	RCCGGY	1 cut(s)	1339
BsrI	ACTGG	1 cut(s)	626
BssAI	RCCGGY	1 cut(s)	1339
BssECI	CCNNGG	8 cut(s)	81, 156, 265, 348, 403, 711, 829, 1015
BssHII	GCGCGC	1 cut(s)	1070
BssMI	GATC	8 cut(s)	124, 189, 240, 1083, 1478, 1486, 1576, 1585
BssNI	GRCGYC	2 cut(s)	384, 1020
BssSI	CACGAG	1 cut(s)	1027
BssT1I	CCWWGG	3 cut(s)	81, 265, 348
Bst2BI	CACGAG	1 cut(s)	1027
Bst2UI	CCWGG	1 cut(s)	506
Bst4CI	ACNGT	4 cut(s)	393, 427, 927, 1294
Bst6I	CTCTTC	6 cut(s)	103, 476, 507, 551, 569, 755
BstACI	GRCGYC	2 cut(s)	384, 1020
BstBAI	YACGTR	3 cut(s)	774, 801, 994
BstC8I	GCNNGC	8 cut(s)	282, 371, 375, 849, 1072, 1247, 1261, 1404
BstDEI	CTNAG	4 cut(s)	193, 590, 1010, 1053
BstDSI	CCRYGG	3 cut(s)	81, 348, 829
BstF5I	GGATG	3 cut(s)	663, 753, 1553
BstFNI	CGCG	5 cut(s)	831, 1072, 1103, 1181, 1283
BstH2I	RGCGCY	4 cut(s)	387, 819, 1053, 1631
BstKTI	GATC	8 cut(s)	127, 192, 243, 1086, 1481, 1489, 1579, 1588
BstMAI	GTCTC	3 cut(s)	1027, 1093, 1279
BstMBI	GATC	8 cut(s)	124, 189, 240, 1083, 1478, 1486, 1576, 1585
BstMWI	GCNNNNNNNGC	8 cut(s)	383, 822, 831, 950, 1231, 1399, 1505, 1520
BstNI	CCWGG	1 cut(s)	506
BstSCI	CCNGG	2 cut(s)	504, 710
BstSFI	CTRYAG	1 cut(s)	1518
BstUI	CGCG	5 cut(s)	831, 1072, 1103, 1181, 1283
BstV1I	GCAGC	2 cut(s)	1418, 1532
BstX2I	RGATCY	3 cut(s)	189, 1486, 1585
BstXI	CCANNNNNNTGG	2 cut(s)	355, 727
BstYI	RGATCY	3 cut(s)	189, 1486, 1585
BsuI	GTATCC	1 cut(s)	254
BsuRI	GGCC	8 cut(s)	145, 179, 216, 342, 408, 504, 719, 1116
BtgI	CCRYGG	3 cut(s)	81, 348, 829
BtgZI	GCGATG	1 cut(s)	1361
BtsCI	GGATG	3 cut(s)	663, 753, 1553
BtsIMutI	CAGTG	1 cut(s)	633
BveI	ACCTGC	1 cut(s)	875
Cac8I	GCNNGC	8 cut(s)	282, 371, 375, 849, 1072, 1247, 1261, 1404
CciI	TCATGA	1 cut(s)	906
Cfr10I	RCCGGY	1 cut(s)	1339
Cfr13I	GGNCC	2 cut(s)	197, 1639
Cfr42I	CCGCGG	1 cut(s)	832
CseI	GACGC	2 cut(s)	1009, 1187
Csp6I	GTAC	3 cut(s)	379, 775, 898
CspCI	CAANNNNNGTGG	2 cut(s)	1015, 1050
CviQI	GTAC	3 cut(s)	379, 775, 898
DdeI	CTNAG	4 cut(s)	193, 590, 1010, 1053
DinI	GGCGCC	1 cut(s)	385
DpnI	GATC	8 cut(s)	126, 191, 242, 1085, 1480, 1488, 1578, 1587
DpnII	GATC	8 cut(s)	124, 189, 240, 1083, 1478, 1486, 1576, 1585
EaeI	YGGCCR	2 cut(s)	502, 717
Eam1104I	CTCTTC	6 cut(s)	103, 476, 507, 551, 569, 755
EarI	CTCTTC	6 cut(s)	103, 476, 507, 551, 569, 755
EciI	GGCGGA	1 cut(s)	631
Ecl136II	GAGCTC	2 cut(s)	133, 1234
Eco130I	CCWWGG	3 cut(s)	81, 265, 348
Eco147I	AGGCCT	2 cut(s)	216, 1116
Eco24I	GRGCYC	2 cut(s)	135, 1236
Eco31I	GGTCTC	1 cut(s)	1279
Eco47I	GGWCC	2 cut(s)	197, 1639
Eco47III	AGCGCT	2 cut(s)	817, 1629
Eco53kI	GAGCTC	2 cut(s)	133, 1234
Eco57I	CTGAAG	3 cut(s)	260, 401, 1451
Eco72I	CACGTG	1 cut(s)	801
Eco88I	CYCGRG	1 cut(s)	884
EcoICRI	GAGCTC	2 cut(s)	133, 1234
EcoRII	CCWGG	1 cut(s)	504
EcoT14I	CCWWGG	3 cut(s)	81, 265, 348
EcoT38I	GRGCYC	2 cut(s)	135, 1236
EgeI	GGCGCC	1 cut(s)	385
EheI	GGCGCC	1 cut(s)	385
ErhI	CCWWGG	3 cut(s)	81, 265, 348
Esp3I	CGTCTC	2 cut(s)	1027, 1093
FaqI	GGGAC	1 cut(s)	795
FauI	CCCGC	2 cut(s)	362, 1254
FbaI	TGATCA	1 cut(s)	1576
FblI	GTMKAC	1 cut(s)	990
Fnu4HI	GCNGC	4 cut(s)	502, 832, 1407, 1521
FokI	GGATG	3 cut(s)	650, 740, 1540
FriOI	GRGCYC	2 cut(s)	135, 1236
Fsp4HI	GCNGC	4 cut(s)	502, 832, 1407, 1521
FspI	TGCGCA	1 cut(s)	605
GluI	GCNGC	4 cut(s)	502, 832, 1407, 1521
GsaI	CCCAGC	1 cut(s)	816
HaeII	RGCGCY	4 cut(s)	387, 819, 1053, 1631
HaeIII	GGCC	8 cut(s)	145, 179, 216, 342, 408, 504, 719, 1116
HapII	CCGG	4 cut(s)	285, 339, 711, 1340
HgaI	GACGC	2 cut(s)	1009, 1187
Hin1I	GRCGYC	2 cut(s)	384, 1020
HincII	GTYRAC	1 cut(s)	115
HindII	GTYRAC	1 cut(s)	115
HindIII	AAGCTT	1 cut(s)	1497
HinfI	GANTC	3 cut(s)	486, 1164, 1462
HpaII	CCGG	4 cut(s)	285, 339, 711, 1340
HphI	GGTGA	4 cut(s)	281, 532, 1378, 1483
Hpy166II	GTNNAC	4 cut(s)	115, 790, 991, 1134
Hpy188I	TCNGA	7 cut(s)	103, 157, 420, 593, 1238, 1576, 1624
Hpy188III	TCNNGA	8 cut(s)	40, 128, 167, 231, 557, 862, 907, 973
Hpy8I	GTNNAC	4 cut(s)	115, 790, 991, 1134
Hpy99I	CGWCG	2 cut(s)	530, 1009
HpyAV	CCTTC	8 cut(s)	27, 36, 101, 425, 472, 587, 778, 1011
HpyCH4III	ACNGT	4 cut(s)	393, 427, 927, 1294
HpyCH4IV	ACGT	3 cut(s)	773, 800, 993
HpyCH4V	TGCA	8 cut(s)	6, 870, 1208, 1382, 1406, 1449, 1508, 1520
HpyF10VI	GCNNNNNNNGC	8 cut(s)	383, 822, 831, 950, 1231, 1399, 1505, 1520
HpyF3I	CTNAG	4 cut(s)	193, 590, 1010, 1053
HpySE526I	ACGT	3 cut(s)	773, 800, 993
Hsp92I	GRCGYC	2 cut(s)	384, 1020
KasI	GGCGCC	1 cut(s)	383
Ksp22I	TGATCA	1 cut(s)	1576
KspI	CCGCGG	1 cut(s)	832
Kzo9I	GATC	8 cut(s)	124, 189, 240, 1083, 1478, 1486, 1576, 1585
LmnI	GCTCC	5 cut(s)	138, 296, 405, 644, 1298
Lsp1109I	GCAGC	2 cut(s)	1418, 1532
LweI	GCATC	3 cut(s)	879, 1338, 1517
MaeII	ACGT	3 cut(s)	773, 800, 993
MaeIII	GTNAC	1 cut(s)	628
MalI	GATC	8 cut(s)	126, 191, 242, 1085, 1480, 1488, 1578, 1587
MboI	GATC	8 cut(s)	124, 189, 240, 1083, 1478, 1486, 1576, 1585
MfeI	CAATTG	1 cut(s)	300
MflI	RGATCY	3 cut(s)	189, 1486, 1585
MhlI	GDGCHC	2 cut(s)	135, 1236
MlsI	TGGCCA	1 cut(s)	719
MluCI	AATT	3 cut(s)	300, 594, 692
MluNI	TGGCCA	1 cut(s)	719
Mly113I	GGCGCC	1 cut(s)	384
MlyI	GAGTC	1 cut(s)	495
MmeI	TCCRAC	2 cut(s)	96, 1276
Mox20I	TGGCCA	1 cut(s)	719
MscI	TGGCCA	1 cut(s)	719
MseI	TTAA	1 cut(s)	59
MslI	CAYNNNNRTG	4 cut(s)	353, 725, 911, 1079
Msp20I	TGGCCA	1 cut(s)	719
MspA1I	CMGCKG	1 cut(s)	831
MspI	CCGG	4 cut(s)	285, 339, 711, 1340
MspR9I	CCNGG	2 cut(s)	506, 712
MunI	CAATTG	1 cut(s)	300
Mva1269I	GAATGC	1 cut(s)	1341
MvaI	CCWGG	1 cut(s)	506
MvnI	CGCG	5 cut(s)	831, 1072, 1103, 1181, 1283
MwoI	GCNNNNNNNGC	8 cut(s)	383, 822, 831, 950, 1231, 1399, 1505, 1520
NarI	GGCGCC	1 cut(s)	384
NciI	CCSGG	1 cut(s)	712
NcoI	CCATGG	2 cut(s)	81, 348
NdeII	GATC	8 cut(s)	124, 189, 240, 1083, 1478, 1486, 1576, 1585
NlaIV	GGNNCC	7 cut(s)	292, 360, 385, 1151, 1300, 1587, 1641
NmeAIII	GCCGAG	2 cut(s)	384, 996
NmuCI	GTSAC	1 cut(s)	628
NsbI	TGCGCA	1 cut(s)	605
PaeR7I	CTCGAG	1 cut(s)	884
PagI	TCATGA	1 cut(s)	906
PauI	GCGCGC	1 cut(s)	1070
PceI	AGGCCT	2 cut(s)	216, 1116
PcsI	WCGNNNNNNNCGW	1 cut(s)	1092
PctI	GAATGC	1 cut(s)	1341
PfeI	GAWTC	2 cut(s)	1164, 1462
Pfl23II	CGTACG	1 cut(s)	378
PkrI	GCNGC	4 cut(s)	503, 833, 1408, 1522
PleI	GAGTC	1 cut(s)	494
PluTI	GGCGCC	1 cut(s)	387
PmaCI	CACGTG	1 cut(s)	801
PmlI	CACGTG	1 cut(s)	801
PpsI	GAGTC	1 cut(s)	494
Ppu21I	YACGTR	3 cut(s)	774, 801, 994
Psp124BI	GAGCTC	2 cut(s)	135, 1236
Psp6I	CCWGG	1 cut(s)	504
PspCI	CACGTG	1 cut(s)	801
PspFI	CCCAGC	1 cut(s)	812
PspGI	CCWGG	1 cut(s)	504
PspLI	CGTACG	1 cut(s)	378
PspN4I	GGNNCC	7 cut(s)	292, 360, 385, 1151, 1300, 1587, 1641
PspPI	GGNCC	2 cut(s)	197, 1639
PspXI	VCTCGAGB	1 cut(s)	884
PstI	CTGCAG	1 cut(s)	1522
PsuI	RGATCY	3 cut(s)	189, 1486, 1585
PteI	GCGCGC	1 cut(s)	1070
RsaI	GTAC	3 cut(s)	380, 776, 899
RsaNI	GTAC	3 cut(s)	379, 775, 898
RseI	CAYNNNNRTG	4 cut(s)	353, 725, 911, 1079
SacI	GAGCTC	2 cut(s)	135, 1236
SacII	CCGCGG	1 cut(s)	832
SaqAI	TTAA	1 cut(s)	59
SatI	GCNGC	4 cut(s)	502, 832, 1407, 1521
Sau3AI	GATC	8 cut(s)	124, 189, 240, 1083, 1478, 1486, 1576, 1585
Sau96I	GGNCC	2 cut(s)	197, 1639
SchI	GAGTC	1 cut(s)	495
ScrFI	CCNGG	2 cut(s)	506, 712
SduI	GDGCHC	2 cut(s)	135, 1236
SfaNI	GCATC	3 cut(s)	879, 1338, 1517
SfcI	CTRYAG	1 cut(s)	1518
SfoI	GGCGCC	1 cut(s)	385
Sfr274I	CTCGAG	1 cut(s)	884
Sfr303I	CCGCGG	1 cut(s)	832
SgrBI	CCGCGG	1 cut(s)	832
SinI	GGWCC	2 cut(s)	197, 1639
SlaI	CTCGAG	1 cut(s)	884
SmiMI	CAYNNNNRTG	4 cut(s)	353, 725, 911, 1079
SmlI	CTYRAG	4 cut(s)	229, 884, 1190, 1410
SmoI	CTYRAG	4 cut(s)	229, 884, 1190, 1410
Sse9I	AATT	3 cut(s)	300, 594, 692
SseBI	AGGCCT	2 cut(s)	216, 1116
SspDI	GGCGCC	1 cut(s)	383
SstI	GAGCTC	2 cut(s)	135, 1236
StuI	AGGCCT	2 cut(s)	216, 1116
StyD4I	CCNGG	2 cut(s)	504, 710
StyI	CCWWGG	3 cut(s)	81, 265, 348
TaaI	ACNGT	4 cut(s)	393, 427, 927, 1294
TaiI	ACGT	3 cut(s)	776, 803, 996
TaqI	TCGA	3 cut(s)	41, 885, 1538
TasI	AATT	3 cut(s)	300, 594, 692
TauI	GCSGC	2 cut(s)	504, 834
TfiI	GAWTC	2 cut(s)	1164, 1462
Tru1I	TTAA	1 cut(s)	59
Tru9I	TTAA	1 cut(s)	59
TscAI	CASTG	1 cut(s)	633
TseFI	GTSAC	1 cut(s)	628
TseI	GCWGC	2 cut(s)	1406, 1520
Tsp45I	GTSAC	1 cut(s)	628
TspDTI	ATGAA	4 cut(s)	454, 494, 742, 895
TspGWI	ACGGA	5 cut(s)	319, 514, 640, 865, 1652
TspRI	CASTG	1 cut(s)	633
VpaK11BI	GGWCC	2 cut(s)	197, 1639
XapI	RAATTY	2 cut(s)	594, 692
XcmI	CCANNNNNNNNNTGG	4 cut(s)	79, 253, 955, 1309
XhoI	CTCGAG	1 cut(s)	884
XmiI	GTMKAC	1 cut(s)	990

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.