Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0015327

Physical Location & Seq

Genomic Coordinates Forward (+)

59034240 .. 59036005

Gene Structure 1766 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG449100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1662 bp

ATGTGTAACCCCAATCCCTCTTCTCCTTCCTCATTCAAAACCCATTTCATGAACCCCAACAAAATGAACCCCAACAAAATCCAAACCCACGATGAAGTTGTTGATCAGGATCAAGAACTCCATAGATGGCCAACTATCTCCGAGGCTTTAGAAGAAATCAAAGCCATAGGGAAAATCTCTGGTCCAACAACCATCACTGGTCTCCTTCTGTATTCCAGAGCCATGATCTCCATGCTTTTCCTCGGCTACCTCGGTGAGCTTGAGCTCGCTGGAGGCTCTCTCTCAATCGGTTTCGCCAACATCACCGGCTACTCTGTAATATCTGGACTCGCCATGGGGATGGAACCCATTTGCGGACAAGCTTATGGCGCCAAACAATGGAAACTTCTAGGCCTTACACTTCAGAGAACAGTTCTTCTCTTACTCTCAACGTCCATCCCCATTTCCTTCATGTGGTTCAACATGAAGAGAATCCTCCTTTGGTGTGGCCAAGATGAGGAGATTTCCTCAGTTGCCCACACTTTCATTCTCTTCTCGATTCCTGACCTCTTCTTTCTCTCGCTTCTTCACCCTCTCAGAATCTACTTGAGAACTCAAAGCATCACATTACCACTCACTTATTGCTCTGCCATCTCTGTTCTCCTTCATGTGCCTTTGAATTTCCTCCTCGTGGTTAAGTTGGACATGGGTGTTTCCGGAGTTGCCATAGCCATGGTGTGGACTAATCTGAACCTCTTCGTTCTGTTGTTCTCCTTCACTTATTTCTCAAATGTTTACAAGGACTCCTGGGTTTCTCCGAGCTCCGATTGCCTCCGGGGATGGTCGTCTCTGCTTGCTCTTGCAATCCCAACTTGTATCTCTGTTTGCTTGGAATGGTGGTGGTATGAGTTCATGATAATGCTGTGTGGACTATTGACCAACCCCAAAGCAACAATTGCTTCAATGGGAATACTAATCCAAACCACTTCTCTTGTCTATGTGTTCCCATCATCACTAAGCCTTGGAGTCTCCACAAGAATTGGCAATGAATTAGGGGCCAATAGACCTGCCAAAGCCCGAATCTCGATGATCGTCTCCCTTGCTTGTGCTTTCGCATTAGGCCTACTAGCCATGTTGTTCACAACCTTGATGAGACACCAATGGGGAAGATTCTTCACAAACGACGCGGAAATCCTCGAGCTCACCGCCATTGCATTGCCGATAGCCGGGCTCTGCGAGCTTGGAAACTGCCCACAGACCACCGGCTGCGGCGTTCTAAGGGGAAGCGCAAGACCCACAGTTGGAGCCAACATCAATTTGGGGTCCTTTTACTTGGTGGGCATGCCTGTTGCCATGCTTATGGGGTTCGTCGTCAAAATGGGGTTTGCCGGGCTCTGGTTGGGTTTGCTTGCGGCTCAAGGCTCCTGCGCCTTGCTCATGCTCTATGTTCTGTGCACAACAGATTGGATGGTTCAAGTGAAAAGAGCAAGTGAGCTCACCGCCCAAACTAATTCTGGCACTTCAACTGCTACTGCTAATCCGACATTACCAATAACATCACCACCCAAGAAGCAGGTTAATGATAATATTAAAGAGATTTTATGCGTCAAAGATGATGATAATGAGGATGAGCTTCTGAAGTCATCTGCAGTGCCACTTGAAACGGACCCTCTAATTATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0001101 GO:0003674 GO:0005215 GO:0005381 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0005794 GO:0006810 GO:0006811 GO:0006812 GO:0006826 GO:0006855 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008324 GO:0009266 GO:0009314 GO:0009408 GO:0009416 GO:0009605 GO:0009607 GO:0009624 GO:0009628 GO:0009642 GO:0009646 GO:0009653 GO:0009719 GO:0009725 GO:0009737 GO:0010015 GO:0010033 GO:0012505 GO:0015075 GO:0015238 GO:0015318 GO:0015893 GO:0017119 GO:0022603 GO:0022622 GO:0022857 GO:0022890 GO:0030001 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0032991 GO:0033993 GO:0034220 GO:0034755 GO:0042221 GO:0042493 GO:0042592 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0046915 GO:0048364 GO:0048731 GO:0048856 GO:0048878 GO:0050789 GO:0050793 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055085 GO:0065007 GO:0065008 GO:0097305 GO:0097708 GO:0098655 GO:0098660 GO:0098662 GO:0098771 GO:0099023 GO:0099402 GO:1901700 GO:1905392 GO:1905428

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

553

Amino Acids

60.46

Weight (kDa)

6.19

Isoelectric Point (pI)

35.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MatE	PF01554	62 - 222	2.2e-37	MatE
MatE	PF01554	283 - 445	1.6e-35	MatE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0015327)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G58340
fragaria_vesca	FvH4_5g33670
malus_domestica	MD08G1209800.v1.1 MD15G1393900.v1.1
pyrus_communis	pycom08g18100 pycom15g35380
rosa_chinensis	RchiOBHm_Chr7g0232641
rosa_laevigata	RLG00000001319
rosa_multiflora	Rmu_sc0005034.1_g000008
rosa_roxburghii	Rroxscaffold_3G00228070
rosa_rugosa	Rorug07G0275900
rosa_samantha	Rh7AG430200 Rh7BG403700 Rh7CG449100 Rh7DG419900
rosa_wichuraiana	Rw7G035540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1054, 1543
AccB1I	GGYRCC	1 cut(s)	368
AccB7I	CCANNNNNTGG	2 cut(s)	378, 717
AccII	CGCG	1 cut(s)	1166
AccIII	TCCGGA	1 cut(s)	695
AciI	CCGC	6 cut(s)	354, 1166, 1185, 1248, 1391, 1479
AclWI	GGATC	1 cut(s)	117
AcoI	YGGCCR	2 cut(s)	128, 487
AcsI	RAATTY	1 cut(s)	658
AcuI	CTGAAG	2 cut(s)	386, 1637
AcyI	GRCGYC	1 cut(s)	369
AfiI	CCNNNNNNNGG	9 cut(s)	353, 378, 453, 496, 670, 717, 1205, 1280, 1374
AgsI	TTSAA	7 cut(s)	37, 460, 658, 942, 1454, 1503, 1640
AjnI	CCWGG	1 cut(s)	785
AjuI	GAANNNNNNNTTGG	2 cut(s)	463, 495
AluBI	AGCT	8 cut(s)	259, 265, 362, 801, 1180, 1219, 1474, 1612
AluI	AGCT	8 cut(s)	259, 265, 362, 801, 1180, 1219, 1474, 1612
Alw21I	GWGCWC	5 cut(s)	267, 803, 1182, 1436, 1476
Alw26I	GTCTC	5 cut(s)	206, 831, 1012, 1078, 1126
Alw44I	GTGCAC	1 cut(s)	1432
AlwI	GGATC	1 cut(s)	117
Ama87I	CYCGRG	1 cut(s)	1175
Aor13HI	TCCGGA	1 cut(s)	695
AoxI	GGCC	5 cut(s)	128, 391, 487, 1035, 1099
ApaLI	GTGCAC	1 cut(s)	1432
ApeKI	GCWGC	1 cut(s)	1245
ApoI	RAATTY	1 cut(s)	658
Asp700I	GAANNNNTTC	1 cut(s)	734
AspLEI	GCGC	3 cut(s)	371, 1268, 1409
AspS9I	GGNCC	4 cut(s)	182, 1035, 1302, 1645
AsuC2I	CCSGG	3 cut(s)	815, 1207, 1369
AsuHPI	GGTGA	6 cut(s)	266, 295, 560, 1174, 1468, 1530
AvaI	CYCGRG	1 cut(s)	1175
AvaII	GGWCC	3 cut(s)	182, 1302, 1645
BaeGI	GKGCMC	1 cut(s)	1436
BalI	TGGCCA	2 cut(s)	130, 489
BanI	GGYRCC	1 cut(s)	368
BanII	GRGCYC	6 cut(s)	267, 803, 1182, 1212, 1374, 1476
BauI	CACGAG	1 cut(s)	668
Bbv12I	GWGCWC	5 cut(s)	267, 803, 1182, 1436, 1476
BbvI	GCAGC	1 cut(s)	1232
BccI	CCATC	8 cut(s)	120, 200, 334, 443, 638, 813, 994, 1441
BciT130I	CCWGG	1 cut(s)	787
BclI	TGATCA	1 cut(s)	103
BcnI	CCSGG	3 cut(s)	815, 1207, 1369
BcoDI	GTCTC	5 cut(s)	206, 831, 1012, 1078, 1126
BfaI	CTAG	2 cut(s)	389, 1106
BfmI	CTRYAG	1 cut(s)	1626
BfoI	RGCGCY	1 cut(s)	372
BfuAI	ACCTGC	2 cut(s)	1054, 1543
BisI	GCNGC	3 cut(s)	1246, 1249, 1392
BlsI	GCNGC	3 cut(s)	1247, 1250, 1393
Bme1390I	CCNGG	4 cut(s)	787, 815, 1207, 1369
Bme18I	GGWCC	3 cut(s)	182, 1302, 1645
BmeT110I	CYCGRG	1 cut(s)	1175
BmgT120I	GGNCC	4 cut(s)	182, 1035, 1302, 1645
BmiI	GGNNCC	7 cut(s)	345, 370, 1036, 1285, 1303, 1402, 1647
BmrFI	CCNGG	4 cut(s)	787, 815, 1207, 1369
BmsI	GCATC	1 cut(s)	609
BplI	GAGNNNNNCTC	4 cut(s)	264, 296, 491, 523
BpmI	CTGGAG	1 cut(s)	291
BpuEI	CTTGAG	3 cut(s)	281, 607, 1380
BpuMI	CCSGG	3 cut(s)	815, 1207, 1369
BsaBI	GATNNNNATC	1 cut(s)	108
BsaHI	GRCGYC	1 cut(s)	369
BsaI	GGTCTC	1 cut(s)	206
BsaJI	CCNNGG	8 cut(s)	141, 241, 250, 333, 711, 786, 814, 1000
BsaWI	WCCGGW	1 cut(s)	695
BsaXI	ACNNNNNCTCC	2 cut(s)	767, 797
Bsc4I	CCNNNNNNNGG	9 cut(s)	353, 378, 453, 496, 670, 717, 1205, 1280, 1374
Bse118I	RCCGGY	2 cut(s)	305, 1241
Bse1I	ACTGG	1 cut(s)	202
Bse3DI	GCAATG	3 cut(s)	1030, 1188, 1193
Bse8I	GATNNNNATC	1 cut(s)	108
BseAI	TCCGGA	1 cut(s)	695
BseBI	CCWGG	1 cut(s)	787
BseDI	CCNNGG	8 cut(s)	141, 241, 250, 333, 711, 786, 814, 1000
BseGI	GGATG	5 cut(s)	345, 435, 824, 1452, 1612
BseJI	GATNNNNATC	1 cut(s)	108
BseLI	CCNNNNNNNGG	9 cut(s)	353, 378, 453, 496, 670, 717, 1205, 1280, 1374
BseMI	GCAATG	3 cut(s)	1030, 1188, 1193
BseMII	CTCAG	2 cut(s)	522, 589
BseNI	ACTGG	1 cut(s)	202
BseRI	GAGGAG	2 cut(s)	512, 656
BseSI	GKGCMC	1 cut(s)	1436
BseXI	GCAGC	1 cut(s)	1232
Bsh1236I	CGCG	1 cut(s)	1166
BshFI	GGCC	5 cut(s)	130, 393, 489, 1037, 1101
BshNI	GGYRCC	1 cut(s)	368
BsiHKAI	GWGCWC	5 cut(s)	267, 803, 1182, 1436, 1476
BsiHKCI	CYCGRG	1 cut(s)	1175
BsiSI	CCGG	6 cut(s)	306, 696, 814, 1206, 1242, 1368
BslI	CCNNNNNNNGG	9 cut(s)	353, 378, 453, 496, 670, 717, 1205, 1280, 1374
BsmAI	GTCTC	5 cut(s)	206, 831, 1012, 1078, 1126
BsmBI	CGTCTC	2 cut(s)	831, 1078
BsnI	GGCC	5 cut(s)	130, 393, 489, 1037, 1101
Bso31I	GGTCTC	1 cut(s)	206
BsoBI	CYCGRG	1 cut(s)	1175
Bsp1286I	GDGCHC	7 cut(s)	267, 803, 1182, 1212, 1374, 1436, 1476
Bsp13I	TCCGGA	1 cut(s)	695
Bsp143I	GATC	4 cut(s)	103, 109, 225, 1068
Bsp19I	CCATGG	2 cut(s)	333, 711
BspACI	CCGC	6 cut(s)	354, 1166, 1185, 1248, 1391, 1479
BspANI	GGCC	5 cut(s)	130, 393, 489, 1037, 1101
BspCNI	CTCAG	2 cut(s)	521, 588
BspEI	TCCGGA	1 cut(s)	695
BspFNI	CGCG	1 cut(s)	1166
BspHI	TCATGA	2 cut(s)	48, 891
BspLI	GGNNCC	7 cut(s)	345, 370, 1036, 1285, 1303, 1402, 1647
BspMAI	CTGCAG	1 cut(s)	1630
BspMI	ACCTGC	2 cut(s)	1054, 1543
BspPI	GGATC	1 cut(s)	117
BspT107I	GGYRCC	1 cut(s)	368
BspTNI	GGTCTC	1 cut(s)	206
BsrDI	GCAATG	3 cut(s)	1030, 1188, 1193
BsrFI	RCCGGY	2 cut(s)	305, 1241
BsrI	ACTGG	1 cut(s)	202
BssAI	RCCGGY	2 cut(s)	305, 1241
BssECI	CCNNGG	8 cut(s)	141, 241, 250, 333, 711, 786, 814, 1000
BssMI	GATC	4 cut(s)	103, 109, 225, 1068
BssNI	GRCGYC	1 cut(s)	369
BssSI	CACGAG	1 cut(s)	668
BssT1I	CCWWGG	3 cut(s)	333, 711, 1000
Bst2BI	CACGAG	1 cut(s)	668
Bst2UI	CCWGG	1 cut(s)	787
Bst4CI	ACNGT	2 cut(s)	412, 1279
Bst6I	CTCTTC	5 cut(s)	25, 461, 536, 554, 740
BstACI	GRCGYC	1 cut(s)	369
BstAPI	GCANNNNNTGC	1 cut(s)	935
BstC8I	GCNNGC	5 cut(s)	267, 834, 1217, 1322, 1389
BstDEI	CTNAG	4 cut(s)	508, 575, 995, 1256
BstDSI	CCRYGG	2 cut(s)	333, 711
BstF5I	GGATG	5 cut(s)	345, 435, 824, 1452, 1612
BstFNI	CGCG	1 cut(s)	1166
BstH2I	RGCGCY	1 cut(s)	372
BstHHI	GCGC	3 cut(s)	371, 1268, 1409
BstKTI	GATC	4 cut(s)	106, 112, 228, 1071
BstMAI	GTCTC	5 cut(s)	206, 831, 1012, 1078, 1126
BstMBI	GATC	4 cut(s)	103, 109, 225, 1068
BstMWI	GCNNNNNNNGC	4 cut(s)	368, 807, 935, 1216
BstNI	CCWGG	1 cut(s)	787
BstNSI	RCATGY	1 cut(s)	1324
BstSCI	CCNGG	4 cut(s)	785, 813, 1205, 1367
BstSFI	CTRYAG	1 cut(s)	1626
BstSLI	GKGCMC	1 cut(s)	1436
BstUI	CGCG	1 cut(s)	1166
BstV1I	GCAGC	1 cut(s)	1232
BstXI	CCANNNNNNTGG	3 cut(s)	340, 712, 1339
BsuRI	GGCC	5 cut(s)	130, 393, 489, 1037, 1101
BtgI	CCRYGG	2 cut(s)	333, 711
BtsCI	GGATG	5 cut(s)	345, 435, 824, 1452, 1612
BtsI	GCAGTG	1 cut(s)	1635
BtsIMutI	CAGTG	2 cut(s)	195, 1635
BveI	ACCTGC	2 cut(s)	1054, 1543
Cac8I	GCNNGC	5 cut(s)	267, 834, 1217, 1322, 1389
CciI	TCATGA	2 cut(s)	48, 891
CfoI	GCGC	3 cut(s)	371, 1268, 1409
Cfr10I	RCCGGY	2 cut(s)	305, 1241
Cfr13I	GGNCC	4 cut(s)	182, 1035, 1302, 1645
CseI	GACGC	2 cut(s)	1172, 1573
CspCI	CAANNNNNGTGG	4 cut(s)	952, 987, 1000, 1035
DdeI	CTNAG	4 cut(s)	508, 575, 995, 1256
DinI	GGCGCC	1 cut(s)	370
DpnI	GATC	4 cut(s)	105, 111, 227, 1070
DpnII	GATC	4 cut(s)	103, 109, 225, 1068
EaeI	YGGCCR	2 cut(s)	128, 487
Eam1104I	CTCTTC	5 cut(s)	25, 461, 536, 554, 740
EarI	CTCTTC	5 cut(s)	25, 461, 536, 554, 740
Ecl136II	GAGCTC	4 cut(s)	265, 801, 1180, 1474
Eco130I	CCWWGG	3 cut(s)	333, 711, 1000
Eco147I	AGGCCT	2 cut(s)	393, 1101
Eco24I	GRGCYC	6 cut(s)	267, 803, 1182, 1212, 1374, 1476
Eco31I	GGTCTC	1 cut(s)	206
Eco47I	GGWCC	3 cut(s)	182, 1302, 1645
Eco53kI	GAGCTC	4 cut(s)	265, 801, 1180, 1474
Eco57I	CTGAAG	2 cut(s)	386, 1637
Eco88I	CYCGRG	1 cut(s)	1175
EcoICRI	GAGCTC	4 cut(s)	265, 801, 1180, 1474
EcoO109I	RGGNCCY	1 cut(s)	1302
EcoRII	CCWGG	1 cut(s)	785
EcoT14I	CCWWGG	3 cut(s)	333, 711, 1000
EcoT38I	GRGCYC	6 cut(s)	267, 803, 1182, 1212, 1374, 1476
EgeI	GGCGCC	1 cut(s)	370
EheI	GGCGCC	1 cut(s)	370
ErhI	CCWWGG	3 cut(s)	333, 711, 1000
Esp3I	CGTCTC	2 cut(s)	831, 1078
FbaI	TGATCA	1 cut(s)	103
Fnu4HI	GCNGC	3 cut(s)	1246, 1249, 1392
FokI	GGATG	5 cut(s)	352, 422, 831, 1459, 1619
FriOI	GRGCYC	6 cut(s)	267, 803, 1182, 1212, 1374, 1476
Fsp4HI	GCNGC	3 cut(s)	1246, 1249, 1392
FspBI	CTAG	2 cut(s)	389, 1106
GlaI	GCGC	3 cut(s)	370, 1267, 1408
GluI	GCNGC	3 cut(s)	1246, 1249, 1392
GsuI	CTGGAG	1 cut(s)	291
HaeII	RGCGCY	1 cut(s)	372
HaeIII	GGCC	5 cut(s)	130, 393, 489, 1037, 1101
HapII	CCGG	6 cut(s)	306, 696, 814, 1206, 1242, 1368
HgaI	GACGC	2 cut(s)	1172, 1573
HhaI	GCGC	3 cut(s)	371, 1268, 1409
Hin1I	GRCGYC	1 cut(s)	369
Hin6I	GCGC	3 cut(s)	369, 1266, 1407
HinP1I	GCGC	3 cut(s)	369, 1266, 1407
HindIII	AAGCTT	1 cut(s)	360
HinfI	GANTC	8 cut(s)	327, 471, 538, 579, 782, 1005, 1059, 1149
HpaII	CCGG	6 cut(s)	306, 696, 814, 1206, 1242, 1368
HphI	GGTGA	6 cut(s)	266, 295, 560, 1174, 1468, 1530
Hpy166II	GTNNAC	5 cut(s)	720, 775, 908, 1119, 1434
Hpy188I	TCNGA	9 cut(s)	142, 405, 578, 729, 798, 805, 1521, 1617, 1661
Hpy8I	GTNNAC	5 cut(s)	720, 775, 908, 1119, 1434
Hpy99I	CGWCG	2 cut(s)	1166, 1352
HpyAV	CCTTC	5 cut(s)	36, 215, 457, 653, 763
HpyCH4III	ACNGT	2 cut(s)	412, 1279
HpyCH4IV	ACGT	1 cut(s)	431
HpyCH4V	TGCA	4 cut(s)	842, 1193, 1434, 1628
HpyF10VI	GCNNNNNNNGC	4 cut(s)	368, 807, 935, 1216
HpyF3I	CTNAG	4 cut(s)	508, 575, 995, 1256
HpySE526I	ACGT	1 cut(s)	431
Hsp92I	GRCGYC	1 cut(s)	369
HspAI	GCGC	3 cut(s)	369, 1266, 1407
KasI	GGCGCC	1 cut(s)	368
Kpn2I	TCCGGA	1 cut(s)	695
Ksp22I	TGATCA	1 cut(s)	103
Kzo9I	GATC	4 cut(s)	103, 109, 225, 1068
LmnI	GCTCC	3 cut(s)	806, 1283, 1406
Lsp1109I	GCAGC	1 cut(s)	1232
LweI	GCATC	1 cut(s)	609
MaeI	CTAG	2 cut(s)	389, 1106
MaeII	ACGT	1 cut(s)	431
MaeIII	GTNAC	1 cut(s)	5
MalI	GATC	4 cut(s)	105, 111, 227, 1070
MboI	GATC	4 cut(s)	103, 109, 225, 1068
MfeI	CAATTG	1 cut(s)	933
MhlI	GDGCHC	7 cut(s)	267, 803, 1182, 1212, 1374, 1436, 1476
MlsI	TGGCCA	2 cut(s)	130, 489
MluCI	AATT	7 cut(s)	658, 933, 1017, 1028, 1294, 1489, 1653
MluNI	TGGCCA	2 cut(s)	130, 489
Mly113I	GGCGCC	1 cut(s)	369
MlyI	GAGTC	3 cut(s)	321, 776, 1014
MmeI	TCCRAC	4 cut(s)	209, 660, 1261, 1544
Mox20I	TGGCCA	2 cut(s)	130, 489
MroI	TCCGGA	1 cut(s)	695
MroXI	GAANNNNTTC	1 cut(s)	734
MscI	TGGCCA	2 cut(s)	130, 489
MseI	TTAA	3 cut(s)	675, 1557, 1569
MslI	CAYNNNNRTG	4 cut(s)	338, 710, 896, 1337
Msp20I	TGGCCA	2 cut(s)	130, 489
MspI	CCGG	6 cut(s)	306, 696, 814, 1206, 1242, 1368
MspR9I	CCNGG	4 cut(s)	787, 815, 1207, 1369
MunI	CAATTG	1 cut(s)	933
MvaI	CCWGG	1 cut(s)	787
MvnI	CGCG	1 cut(s)	1166
MwoI	GCNNNNNNNGC	4 cut(s)	368, 807, 935, 1216
NarI	GGCGCC	1 cut(s)	369
NciI	CCSGG	3 cut(s)	815, 1207, 1369
NcoI	CCATGG	2 cut(s)	333, 711
NdeII	GATC	4 cut(s)	103, 109, 225, 1068
NlaIV	GGNNCC	7 cut(s)	345, 370, 1036, 1285, 1303, 1402, 1647
NmeAIII	GCCGAG	1 cut(s)	222
NspI	RCATGY	1 cut(s)	1324
PaeI	GCATGC	1 cut(s)	1324
PaeR7I	CTCGAG	1 cut(s)	1175
PagI	TCATGA	2 cut(s)	48, 891
PceI	AGGCCT	2 cut(s)	393, 1101
PdmI	GAANNNNTTC	1 cut(s)	734
PfeI	GAWTC	5 cut(s)	471, 538, 579, 1059, 1149
PflMI	CCANNNNNTGG	2 cut(s)	378, 717
PkrI	GCNGC	3 cut(s)	1247, 1250, 1393
PleI	GAGTC	3 cut(s)	321, 776, 1013
PluTI	GGCGCC	1 cut(s)	372
PpsI	GAGTC	3 cut(s)	321, 776, 1013
PpuMI	RGGWCCY	1 cut(s)	1302
Psp124BI	GAGCTC	4 cut(s)	267, 803, 1182, 1476
Psp5II	RGGWCCY	1 cut(s)	1302
Psp6I	CCWGG	1 cut(s)	785
PspGI	CCWGG	1 cut(s)	785
PspN4I	GGNNCC	7 cut(s)	345, 370, 1036, 1285, 1303, 1402, 1647
PspPI	GGNCC	4 cut(s)	182, 1035, 1302, 1645
PspPPI	RGGWCCY	1 cut(s)	1302
PspXI	VCTCGAGB	1 cut(s)	1175
PstI	CTGCAG	1 cut(s)	1630
RseI	CAYNNNNRTG	4 cut(s)	338, 710, 896, 1337
SacI	GAGCTC	4 cut(s)	267, 803, 1182, 1476
SaqAI	TTAA	3 cut(s)	675, 1557, 1569
SatI	GCNGC	3 cut(s)	1246, 1249, 1392
Sau3AI	GATC	4 cut(s)	103, 109, 225, 1068
Sau96I	GGNCC	4 cut(s)	182, 1035, 1302, 1645
SchI	GAGTC	3 cut(s)	321, 776, 1014
ScrFI	CCNGG	4 cut(s)	787, 815, 1207, 1369
SduI	GDGCHC	7 cut(s)	267, 803, 1182, 1212, 1374, 1436, 1476
SfaNI	GCATC	1 cut(s)	609
SfcI	CTRYAG	1 cut(s)	1626
SfoI	GGCGCC	1 cut(s)	370
Sfr274I	CTCGAG	1 cut(s)	1175
SinI	GGWCC	3 cut(s)	182, 1302, 1645
SlaI	CTCGAG	1 cut(s)	1175
SmiMI	CAYNNNNRTG	4 cut(s)	338, 710, 896, 1337
SmlI	CTYRAG	4 cut(s)	260, 586, 1175, 1395
SmoI	CTYRAG	4 cut(s)	260, 586, 1175, 1395
SphI	GCATGC	1 cut(s)	1324
Sse9I	AATT	7 cut(s)	658, 933, 1017, 1028, 1294, 1489, 1653
SseBI	AGGCCT	2 cut(s)	393, 1101
SsiI	CCGC	6 cut(s)	354, 1166, 1185, 1248, 1391, 1479
SspDI	GGCGCC	1 cut(s)	368
SspI	AATATT	1 cut(s)	1567
SspMI	CTAG	2 cut(s)	389, 1106
SstI	GAGCTC	4 cut(s)	267, 803, 1182, 1476
StuI	AGGCCT	2 cut(s)	393, 1101
StyD4I	CCNGG	4 cut(s)	785, 813, 1205, 1367
StyI	CCWWGG	3 cut(s)	333, 711, 1000
TaaI	ACNGT	2 cut(s)	412, 1279
TaiI	ACGT	1 cut(s)	434
TaqI	TCGA	3 cut(s)	536, 1064, 1176
TasI	AATT	7 cut(s)	658, 933, 1017, 1028, 1294, 1489, 1653
TauI	GCSGC	2 cut(s)	1251, 1394
TfiI	GAWTC	5 cut(s)	471, 538, 579, 1059, 1149
Tru1I	TTAA	3 cut(s)	675, 1557, 1569
Tru9I	TTAA	3 cut(s)	675, 1557, 1569
TscAI	CASTG	2 cut(s)	202, 1635
TseI	GCWGC	1 cut(s)	1245
TspGWI	ACGGA	1 cut(s)	1658
TspRI	CASTG	2 cut(s)	202, 1635
Van91I	CCANNNNNTGG	2 cut(s)	378, 717
VneI	GTGCAC	1 cut(s)	1432
VpaK11BI	GGWCC	3 cut(s)	182, 1302, 1645
XapI	RAATTY	1 cut(s)	658
XceI	RCATGY	1 cut(s)	1324
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1294, 1490
XhoI	CTCGAG	1 cut(s)	1175
XmnI	GAANNNNTTC	1 cut(s)	734
XspI	CTAG	2 cut(s)	389, 1106

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.