Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G58340 |
| fragaria_vesca | FvH4_5g33670 |
| malus_domestica | MD08G1209800.v1.1 MD15G1393900.v1.1 |
| pyrus_communis | pycom08g18100 pycom15g35380 |
| rosa_chinensis | RchiOBHm_Chr7g0232641 |
| rosa_laevigata | RLG00000001319 |
| rosa_multiflora | Rmu_sc0005034.1_g000008 |
| rosa_roxburghii | Rroxscaffold_3G00228070 |
| rosa_rugosa | Rorug07G0275900 |
| rosa_samantha | Rh7AG430200 Rh7BG403700 Rh7CG449100 Rh7DG419900 |
| rosa_wichuraiana | Rw7G035540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 832 |
| AccB1I | GGYRCC | 1 cut(s) | 146 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 156, 495 |
| AccII | CGCG | 1 cut(s) | 944 |
| AccIII | TCCGGA | 1 cut(s) | 473 |
| AciI | CCGC | 6 cut(s) | 132, 944, 963, 1026, 1169, 1257 |
| AcoI | YGGCCR | 1 cut(s) | 265 |
| AcsI | RAATTY | 2 cut(s) | 279, 436 |
| AcuI | CTGAAG | 2 cut(s) | 164, 1415 |
| AcyI | GRCGYC | 1 cut(s) | 147 |
| AfaI | GTAC | 1 cut(s) | 89 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 131, 156, 231, 274, 448, 495, 983, 1058, 1152 |
| AgsI | TTSAA | 6 cut(s) | 238, 436, 720, 1232, 1281, 1418 |
| AjnI | CCWGG | 1 cut(s) | 563 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 241, 273 |
| AluBI | AGCT | 9 cut(s) | 37, 43, 140, 163, 579, 958, 997, 1252, 1390 |
| AluI | AGCT | 9 cut(s) | 37, 43, 140, 163, 579, 958, 997, 1252, 1390 |
| Alw21I | GWGCWC | 5 cut(s) | 45, 581, 960, 1214, 1254 |
| Alw26I | GTCTC | 4 cut(s) | 609, 790, 856, 904 |
| Alw44I | GTGCAC | 1 cut(s) | 1210 |
| Aor13HI | TCCGGA | 1 cut(s) | 473 |
| AoxI | GGCC | 4 cut(s) | 169, 265, 813, 877 |
| ApaLI | GTGCAC | 1 cut(s) | 1210 |
| ApeKI | GCWGC | 1 cut(s) | 1023 |
| ApoI | RAATTY | 2 cut(s) | 279, 436 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 512 |
| AspLEI | GCGC | 3 cut(s) | 149, 1046, 1187 |
| AspS9I | GGNCC | 3 cut(s) | 813, 1080, 1423 |
| AsuC2I | CCSGG | 4 cut(s) | 85, 593, 985, 1147 |
| AsuHPI | GGTGA | 5 cut(s) | 73, 338, 952, 1246, 1308 |
| AvaII | GGWCC | 2 cut(s) | 1080, 1423 |
| BaeGI | GKGCMC | 1 cut(s) | 1214 |
| BalI | TGGCCA | 1 cut(s) | 267 |
| BanI | GGYRCC | 1 cut(s) | 146 |
| BanII | GRGCYC | 6 cut(s) | 45, 581, 960, 990, 1152, 1254 |
| BauI | CACGAG | 1 cut(s) | 446 |
| Bbv12I | GWGCWC | 5 cut(s) | 45, 581, 960, 1214, 1254 |
| BbvI | GCAGC | 1 cut(s) | 1010 |
| BccI | CCATC | 5 cut(s) | 221, 416, 591, 772, 1219 |
| BciT130I | CCWGG | 1 cut(s) | 565 |
| BcnI | CCSGG | 4 cut(s) | 85, 593, 985, 1147 |
| BcoDI | GTCTC | 4 cut(s) | 609, 790, 856, 904 |
| BfaI | CTAG | 2 cut(s) | 167, 884 |
| BfmI | CTRYAG | 1 cut(s) | 1404 |
| BfoI | RGCGCY | 1 cut(s) | 150 |
| BfuAI | ACCTGC | 1 cut(s) | 832 |
| BisI | GCNGC | 3 cut(s) | 1024, 1027, 1170 |
| BlsI | GCNGC | 3 cut(s) | 1025, 1028, 1171 |
| Bme1390I | CCNGG | 5 cut(s) | 85, 565, 593, 985, 1147 |
| Bme18I | GGWCC | 2 cut(s) | 1080, 1423 |
| BmgT120I | GGNCC | 3 cut(s) | 813, 1080, 1423 |
| BmiI | GGNNCC | 7 cut(s) | 123, 148, 814, 1063, 1081, 1180, 1425 |
| BmrFI | CCNGG | 5 cut(s) | 85, 565, 593, 985, 1147 |
| BmsI | GCATC | 1 cut(s) | 387 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 42, 74 |
| BpuEI | CTTGAG | 4 cut(s) | 59, 385, 974, 1158 |
| BpuMI | CCSGG | 4 cut(s) | 85, 593, 985, 1147 |
| BsaHI | GRCGYC | 1 cut(s) | 147 |
| BsaJI | CCNNGG | 6 cut(s) | 19, 111, 489, 564, 592, 778 |
| BsaWI | WCCGGW | 1 cut(s) | 473 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 545, 575 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 131, 156, 231, 274, 448, 495, 983, 1058, 1152 |
| Bse118I | RCCGGY | 1 cut(s) | 1019 |
| Bse3DI | GCAATG | 3 cut(s) | 808, 966, 971 |
| BseAI | TCCGGA | 1 cut(s) | 473 |
| BseBI | CCWGG | 1 cut(s) | 565 |
| BseDI | CCNNGG | 6 cut(s) | 19, 111, 489, 564, 592, 778 |
| BseGI | GGATG | 4 cut(s) | 213, 602, 1230, 1390 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 131, 156, 231, 274, 448, 495, 983, 1058, 1152 |
| BseMI | GCAATG | 3 cut(s) | 808, 966, 971 |
| BseMII | CTCAG | 1 cut(s) | 300 |
| BseRI | GAGGAG | 1 cut(s) | 434 |
| BseSI | GKGCMC | 1 cut(s) | 1214 |
| BseXI | GCAGC | 1 cut(s) | 1010 |
| Bsh1236I | CGCG | 1 cut(s) | 944 |
| BshFI | GGCC | 4 cut(s) | 171, 267, 815, 879 |
| BshNI | GGYRCC | 1 cut(s) | 146 |
| BsiHKAI | GWGCWC | 5 cut(s) | 45, 581, 960, 1214, 1254 |
| BsiSI | CCGG | 7 cut(s) | 48, 84, 474, 592, 984, 1020, 1146 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 131, 156, 231, 274, 448, 495, 983, 1058, 1152 |
| BsmAI | GTCTC | 4 cut(s) | 609, 790, 856, 904 |
| BsmBI | CGTCTC | 2 cut(s) | 609, 856 |
| BsnI | GGCC | 4 cut(s) | 171, 267, 815, 879 |
| Bsp1286I | GDGCHC | 7 cut(s) | 45, 581, 960, 990, 1152, 1214, 1254 |
| Bsp13I | TCCGGA | 1 cut(s) | 473 |
| Bsp143I | GATC | 2 cut(s) | 3, 846 |
| Bsp19I | CCATGG | 2 cut(s) | 111, 489 |
| BspACI | CCGC | 6 cut(s) | 132, 944, 963, 1026, 1169, 1257 |
| BspANI | GGCC | 4 cut(s) | 171, 267, 815, 879 |
| BspCNI | CTCAG | 1 cut(s) | 299 |
| BspEI | TCCGGA | 1 cut(s) | 473 |
| BspFNI | CGCG | 1 cut(s) | 944 |
| BspHI | TCATGA | 1 cut(s) | 669 |
| BspLI | GGNNCC | 7 cut(s) | 123, 148, 814, 1063, 1081, 1180, 1425 |
| BspMAI | CTGCAG | 1 cut(s) | 1408 |
| BspMI | ACCTGC | 1 cut(s) | 832 |
| BspT107I | GGYRCC | 1 cut(s) | 146 |
| BsrDI | GCAATG | 3 cut(s) | 808, 966, 971 |
| BsrFI | RCCGGY | 1 cut(s) | 1019 |
| BssAI | RCCGGY | 1 cut(s) | 1019 |
| BssECI | CCNNGG | 6 cut(s) | 19, 111, 489, 564, 592, 778 |
| BssMI | GATC | 2 cut(s) | 3, 846 |
| BssNI | GRCGYC | 1 cut(s) | 147 |
| BssSI | CACGAG | 1 cut(s) | 446 |
| BssT1I | CCWWGG | 3 cut(s) | 111, 489, 778 |
| Bst2BI | CACGAG | 1 cut(s) | 446 |
| Bst2UI | CCWGG | 1 cut(s) | 565 |
| Bst4CI | ACNGT | 2 cut(s) | 190, 1057 |
| Bst6I | CTCTTC | 4 cut(s) | 239, 314, 332, 518 |
| BstACI | GRCGYC | 1 cut(s) | 147 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 713 |
| BstC8I | GCNNGC | 6 cut(s) | 35, 45, 612, 995, 1100, 1167 |
| BstDEI | CTNAG | 3 cut(s) | 286, 773, 1034 |
| BstDSI | CCRYGG | 2 cut(s) | 111, 489 |
| BstF5I | GGATG | 4 cut(s) | 213, 602, 1230, 1390 |
| BstFNI | CGCG | 1 cut(s) | 944 |
| BstH2I | RGCGCY | 1 cut(s) | 150 |
| BstHHI | GCGC | 3 cut(s) | 149, 1046, 1187 |
| BstKTI | GATC | 2 cut(s) | 6, 849 |
| BstMAI | GTCTC | 4 cut(s) | 609, 790, 856, 904 |
| BstMBI | GATC | 2 cut(s) | 3, 846 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 30, 146, 585, 713, 994 |
| BstNI | CCWGG | 1 cut(s) | 565 |
| BstNSI | RCATGY | 2 cut(s) | 1102, 1334 |
| BstSCI | CCNGG | 5 cut(s) | 83, 563, 591, 983, 1145 |
| BstSFI | CTRYAG | 1 cut(s) | 1404 |
| BstSLI | GKGCMC | 1 cut(s) | 1214 |
| BstUI | CGCG | 1 cut(s) | 944 |
| BstV1I | GCAGC | 1 cut(s) | 1010 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 118, 490, 1117 |
| BsuRI | GGCC | 4 cut(s) | 171, 267, 815, 879 |
| BtgI | CCRYGG | 2 cut(s) | 111, 489 |
| BtsCI | GGATG | 4 cut(s) | 213, 602, 1230, 1390 |
| BtsI | GCAGTG | 1 cut(s) | 1413 |
| BtsIMutI | CAGTG | 1 cut(s) | 1413 |
| BveI | ACCTGC | 1 cut(s) | 832 |
| Cac8I | GCNNGC | 6 cut(s) | 35, 45, 612, 995, 1100, 1167 |
| CciI | TCATGA | 1 cut(s) | 669 |
| CfoI | GCGC | 3 cut(s) | 149, 1046, 1187 |
| Cfr10I | RCCGGY | 1 cut(s) | 1019 |
| Cfr13I | GGNCC | 3 cut(s) | 813, 1080, 1423 |
| CseI | GACGC | 2 cut(s) | 950, 1351 |
| Csp6I | GTAC | 1 cut(s) | 88 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 730, 765, 778, 813 |
| CviQI | GTAC | 1 cut(s) | 88 |
| DdeI | CTNAG | 3 cut(s) | 286, 773, 1034 |
| DinI | GGCGCC | 1 cut(s) | 148 |
| DpnI | GATC | 2 cut(s) | 5, 848 |
| DpnII | GATC | 2 cut(s) | 3, 846 |
| EaeI | YGGCCR | 1 cut(s) | 265 |
| Eam1104I | CTCTTC | 4 cut(s) | 239, 314, 332, 518 |
| EarI | CTCTTC | 4 cut(s) | 239, 314, 332, 518 |
| Ecl136II | GAGCTC | 4 cut(s) | 43, 579, 958, 1252 |
| Eco130I | CCWWGG | 3 cut(s) | 111, 489, 778 |
| Eco147I | AGGCCT | 2 cut(s) | 171, 879 |
| Eco24I | GRGCYC | 6 cut(s) | 45, 581, 960, 990, 1152, 1254 |
| Eco47I | GGWCC | 2 cut(s) | 1080, 1423 |
| Eco53kI | GAGCTC | 4 cut(s) | 43, 579, 958, 1252 |
| Eco57I | CTGAAG | 2 cut(s) | 164, 1415 |
| EcoICRI | GAGCTC | 4 cut(s) | 43, 579, 958, 1252 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1080 |
| EcoRII | CCWGG | 1 cut(s) | 563 |
| EcoT14I | CCWWGG | 3 cut(s) | 111, 489, 778 |
| EcoT38I | GRGCYC | 6 cut(s) | 45, 581, 960, 990, 1152, 1254 |
| EgeI | GGCGCC | 1 cut(s) | 148 |
| EheI | GGCGCC | 1 cut(s) | 148 |
| ErhI | CCWWGG | 3 cut(s) | 111, 489, 778 |
| Esp3I | CGTCTC | 2 cut(s) | 609, 856 |
| Fnu4HI | GCNGC | 3 cut(s) | 1024, 1027, 1170 |
| FokI | GGATG | 4 cut(s) | 200, 609, 1237, 1397 |
| FriOI | GRGCYC | 6 cut(s) | 45, 581, 960, 990, 1152, 1254 |
| Fsp4HI | GCNGC | 3 cut(s) | 1024, 1027, 1170 |
| FspBI | CTAG | 2 cut(s) | 167, 884 |
| GlaI | GCGC | 3 cut(s) | 148, 1045, 1186 |
| GluI | GCNGC | 3 cut(s) | 1024, 1027, 1170 |
| HaeII | RGCGCY | 1 cut(s) | 150 |
| HaeIII | GGCC | 4 cut(s) | 171, 267, 815, 879 |
| HapII | CCGG | 7 cut(s) | 48, 84, 474, 592, 984, 1020, 1146 |
| HgaI | GACGC | 2 cut(s) | 950, 1351 |
| HhaI | GCGC | 3 cut(s) | 149, 1046, 1187 |
| Hin1I | GRCGYC | 1 cut(s) | 147 |
| Hin6I | GCGC | 3 cut(s) | 147, 1044, 1185 |
| HinP1I | GCGC | 3 cut(s) | 147, 1044, 1185 |
| HindIII | AAGCTT | 2 cut(s) | 138, 161 |
| HinfI | GANTC | 8 cut(s) | 105, 249, 316, 357, 560, 783, 837, 927 |
| HpaII | CCGG | 7 cut(s) | 48, 84, 474, 592, 984, 1020, 1146 |
| HphI | GGTGA | 5 cut(s) | 73, 338, 952, 1246, 1308 |
| Hpy166II | GTNNAC | 5 cut(s) | 498, 553, 686, 897, 1212 |
| Hpy188I | TCNGA | 8 cut(s) | 183, 356, 507, 576, 583, 1299, 1395, 1439 |
| Hpy188III | TCNNGA | 6 cut(s) | 102, 313, 320, 474, 670, 841 |
| Hpy8I | GTNNAC | 5 cut(s) | 498, 553, 686, 897, 1212 |
| Hpy99I | CGWCG | 2 cut(s) | 944, 1130 |
| HpyAV | CCTTC | 3 cut(s) | 235, 431, 541 |
| HpyCH4III | ACNGT | 2 cut(s) | 190, 1057 |
| HpyCH4IV | ACGT | 1 cut(s) | 209 |
| HpyCH4V | TGCA | 4 cut(s) | 620, 971, 1212, 1406 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 30, 146, 585, 713, 994 |
| HpyF3I | CTNAG | 3 cut(s) | 286, 773, 1034 |
| HpySE526I | ACGT | 1 cut(s) | 209 |
| Hsp92I | GRCGYC | 1 cut(s) | 147 |
| HspAI | GCGC | 3 cut(s) | 147, 1044, 1185 |
| KasI | GGCGCC | 1 cut(s) | 146 |
| Kpn2I | TCCGGA | 1 cut(s) | 473 |
| Kzo9I | GATC | 2 cut(s) | 3, 846 |
| LmnI | GCTCC | 4 cut(s) | 584, 1061, 1184, 1249 |
| Lsp1109I | GCAGC | 1 cut(s) | 1010 |
| LweI | GCATC | 1 cut(s) | 387 |
| MaeI | CTAG | 2 cut(s) | 167, 884 |
| MaeII | ACGT | 1 cut(s) | 209 |
| MalI | GATC | 2 cut(s) | 5, 848 |
| MboI | GATC | 2 cut(s) | 3, 846 |
| MboII | GAAGA | 8 cut(s) | 185, 256, 301, 319, 335, 505, 922, 936 |
| MfeI | CAATTG | 1 cut(s) | 711 |
| MhlI | GDGCHC | 7 cut(s) | 45, 581, 960, 990, 1152, 1214, 1254 |
| MlsI | TGGCCA | 1 cut(s) | 267 |
| MluCI | AATT | 8 cut(s) | 279, 436, 711, 795, 806, 1072, 1267, 1431 |
| MluNI | TGGCCA | 1 cut(s) | 267 |
| Mly113I | GGCGCC | 1 cut(s) | 147 |
| MlyI | GAGTC | 3 cut(s) | 99, 554, 792 |
| MmeI | TCCRAC | 3 cut(s) | 438, 1039, 1322 |
| Mox20I | TGGCCA | 1 cut(s) | 267 |
| MroI | TCCGGA | 1 cut(s) | 473 |
| MroXI | GAANNNNTTC | 1 cut(s) | 512 |
| MscI | TGGCCA | 1 cut(s) | 267 |
| MseI | TTAA | 3 cut(s) | 453, 1335, 1347 |
| MslI | CAYNNNNRTG | 5 cut(s) | 116, 488, 674, 1115, 1335 |
| Msp20I | TGGCCA | 1 cut(s) | 267 |
| MspI | CCGG | 7 cut(s) | 48, 84, 474, 592, 984, 1020, 1146 |
| MspR9I | CCNGG | 5 cut(s) | 85, 565, 593, 985, 1147 |
| MunI | CAATTG | 1 cut(s) | 711 |
| MvaI | CCWGG | 1 cut(s) | 565 |
| MvnI | CGCG | 1 cut(s) | 944 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 30, 146, 585, 713, 994 |
| NarI | GGCGCC | 1 cut(s) | 147 |
| NciI | CCSGG | 4 cut(s) | 85, 593, 985, 1147 |
| NcoI | CCATGG | 2 cut(s) | 111, 489 |
| NdeII | GATC | 2 cut(s) | 3, 846 |
| NlaIV | GGNNCC | 7 cut(s) | 123, 148, 814, 1063, 1081, 1180, 1425 |
| NmeAIII | GCCGAG | 1 cut(s) | 9 |
| NspI | RCATGY | 2 cut(s) | 1102, 1334 |
| PaeI | GCATGC | 1 cut(s) | 1102 |
| PagI | TCATGA | 1 cut(s) | 669 |
| PceI | AGGCCT | 2 cut(s) | 171, 879 |
| PdmI | GAANNNNTTC | 1 cut(s) | 512 |
| PfeI | GAWTC | 5 cut(s) | 249, 316, 357, 837, 927 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 156, 495 |
| PkrI | GCNGC | 3 cut(s) | 1025, 1028, 1171 |
| PleI | GAGTC | 3 cut(s) | 99, 554, 791 |
| PluTI | GGCGCC | 1 cut(s) | 150 |
| PpsI | GAGTC | 3 cut(s) | 99, 554, 791 |
| PpuMI | RGGWCCY | 1 cut(s) | 1080 |
| Psp124BI | GAGCTC | 4 cut(s) | 45, 581, 960, 1254 |
| Psp5II | RGGWCCY | 1 cut(s) | 1080 |
| Psp6I | CCWGG | 1 cut(s) | 563 |
| PspGI | CCWGG | 1 cut(s) | 563 |
| PspN4I | GGNNCC | 7 cut(s) | 123, 148, 814, 1063, 1081, 1180, 1425 |
| PspPI | GGNCC | 3 cut(s) | 813, 1080, 1423 |
| PspPPI | RGGWCCY | 1 cut(s) | 1080 |
| PstI | CTGCAG | 1 cut(s) | 1408 |
| RsaI | GTAC | 1 cut(s) | 89 |
| RsaNI | GTAC | 1 cut(s) | 88 |
| RseI | CAYNNNNRTG | 5 cut(s) | 116, 488, 674, 1115, 1335 |
| SacI | GAGCTC | 4 cut(s) | 45, 581, 960, 1254 |
| SaqAI | TTAA | 3 cut(s) | 453, 1335, 1347 |
| SatI | GCNGC | 3 cut(s) | 1024, 1027, 1170 |
| Sau3AI | GATC | 2 cut(s) | 3, 846 |
| Sau96I | GGNCC | 3 cut(s) | 813, 1080, 1423 |
| SchI | GAGTC | 3 cut(s) | 99, 554, 792 |
| ScrFI | CCNGG | 5 cut(s) | 85, 565, 593, 985, 1147 |
| SduI | GDGCHC | 7 cut(s) | 45, 581, 960, 990, 1152, 1214, 1254 |
| SfaNI | GCATC | 1 cut(s) | 387 |
| SfcI | CTRYAG | 1 cut(s) | 1404 |
| SfoI | GGCGCC | 1 cut(s) | 148 |
| SinI | GGWCC | 2 cut(s) | 1080, 1423 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 116, 488, 674, 1115, 1335 |
| SmlI | CTYRAG | 4 cut(s) | 38, 364, 953, 1173 |
| SmoI | CTYRAG | 4 cut(s) | 38, 364, 953, 1173 |
| SphI | GCATGC | 1 cut(s) | 1102 |
| Sse9I | AATT | 8 cut(s) | 279, 436, 711, 795, 806, 1072, 1267, 1431 |
| SseBI | AGGCCT | 2 cut(s) | 171, 879 |
| SsiI | CCGC | 6 cut(s) | 132, 944, 963, 1026, 1169, 1257 |
| SspDI | GGCGCC | 1 cut(s) | 146 |
| SspI | AATATT | 1 cut(s) | 1345 |
| SspMI | CTAG | 2 cut(s) | 167, 884 |
| SstI | GAGCTC | 4 cut(s) | 45, 581, 960, 1254 |
| StuI | AGGCCT | 2 cut(s) | 171, 879 |
| StyD4I | CCNGG | 5 cut(s) | 83, 563, 591, 983, 1145 |
| StyI | CCWWGG | 3 cut(s) | 111, 489, 778 |
| TaaI | ACNGT | 2 cut(s) | 190, 1057 |
| TaiI | ACGT | 1 cut(s) | 212 |
| TaqI | TCGA | 2 cut(s) | 314, 842 |
| TasI | AATT | 8 cut(s) | 279, 436, 711, 795, 806, 1072, 1267, 1431 |
| TauI | GCSGC | 2 cut(s) | 1029, 1172 |
| TfiI | GAWTC | 5 cut(s) | 249, 316, 357, 837, 927 |
| Tru1I | TTAA | 3 cut(s) | 453, 1335, 1347 |
| Tru9I | TTAA | 3 cut(s) | 453, 1335, 1347 |
| TscAI | CASTG | 1 cut(s) | 1413 |
| TseI | GCWGC | 1 cut(s) | 1023 |
| TspDTI | ATGAA | 6 cut(s) | 217, 257, 292, 413, 658, 819 |
| TspGWI | ACGGA | 1 cut(s) | 1436 |
| TspRI | CASTG | 1 cut(s) | 1413 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 156, 495 |
| VneI | GTGCAC | 1 cut(s) | 1210 |
| VpaK11BI | GGWCC | 2 cut(s) | 1080, 1423 |
| XapI | RAATTY | 2 cut(s) | 279, 436 |
| XceI | RCATGY | 2 cut(s) | 1102, 1334 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1072, 1268 |
| XmnI | GAANNNNTTC | 1 cut(s) | 512 |
| XspI | CTAG | 2 cut(s) | 167, 884 |