Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0015327

Physical Location & Seq

Genomic Coordinates Reverse (-)

12387018 .. 12389035

Gene Structure 2018 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00228070.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1647 bp

ATGTGTAACCCCAATCCCTCTTCTCCTTCCTCATTCAAAACCCATTTCATGAACCCCAACAAAATCCAAACCCATGATGAAGTTGTTGCTCAGGATCAAGAACTCCATAGATGGCCAACTATCTCCGAGGCTTTACAAGAAATCAAAGCCATAGGGAAAATCTCTGGTCCAACAACCATCACTGGTCTCCTTCTGTATTCCAGAGCCATGATCTCCATGCTTTTCCTCGGCTACCTCGGTGAGCTTGAGCTCGCCGGAGGCTCTCTCTCAATCGGTTTCGCCAACATCACCGGCTACTCTGTAATATCTGGACTCGCCATGGGAATGGAACCCATTTGCGGACAAGCTTATGGCGCCAAACAATGGAAGCTTCTAGGCCTAACACTTCAGAGAACAGTTCTTCTGTTGCTCTCAACGTCCATCCCCATTTCCTTCATGTGGTTCAACATGAAGAGAATCCTCCTTTGGTGTGGCCAAGATGAGGAGATTTCCTCAGTTGCCCACACTTTCATTCTCTTCTCGATTCCTGACCTCTTCTTTCTCTCGCTTCTTCACCCTCTCCGAATCTACTTGAGAACTCAAAGCATCACATTACCACTCACTTATTGCTCTGCCATCTCTGTTCTCCTTCATGTGCCTCTGAATTTCCTCCTCGTGGTTAAGTTGGACATGGGTGTTTCCGGAGTTGCCATAGCCATGGTGTGGACTAATCTGAACCTCTTCGTTCTGTTGTTCTCCTTCACTTATTTCTCAAATGTTTACAAGGACTCCTGGGTTTCTCCGAGCTCCGATTGCCTCCGGGGATGGTCGTCTCTGCTTGCTCTTGCAATCCCAACTTGTATCTCTGTTTGCTTGGAATGGTGGTGGTATGAGTTCATGATAATGCTGTGTGGACTATTGGCCAACCCCAAAGCAACAATTGCTTCAATGGGAATACTAATCCAAACCACTTCTCTTGTCTATGTGTTCCCATCATCACTAAGCCTTGGAGTCTCCACAAGAATTGGCAATGAATTAGGGGCCAATAGACCTGCCAAAGCCCGAATCTCGATGATCGTCTCCCTTGCTTGTGCTTTCGCATTAGGCCTACTAGCCATGTTGTTCACAACCTTGATGAGACACCAATGGGGAAGATTCTTCACAAACGACACGGAAATCCTTGAGCTCACCGCCATTGCATTGCCGATAGCCGGGCTCTGCGAGCTTGGAAACTGCCCACAGACCACCGGCTGCGGCGTTCTAAGGGGAAGCGCAAGACCCACAATTGGAGCCAACATCAATTTGGGGTCCTTTTACTTGGTGGGCATGCCTGTTGCCATGCTTATGGGGTTCGTCGTCAAAATGGGGTTCGCCGGGCTCTGGTTGGGTTTGCTTGCGGCTCAAGGCTCCTGCGCCTTGCTCATGCTCTATGTTCTGTGCACAACAGATTGGATGGTTCAAGTGAAAAGAGCAAGTGAGCTCACCGCCCAAACTAATTCTGGCACTTCAACTGCTACTGCTAATCCGACATTACCAATAACATCACCACCCAAGAAGCAGGTTAATGATAATATTAAAGAGATTTTATGCATCAAAGATGATGATAATGAGGATGAGCTTCTGAAGTCATCTGCAGTGCCACTTGAAACGGACCCTCTAATTATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0001101 GO:0003674 GO:0005215 GO:0005381 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0005794 GO:0006810 GO:0006811 GO:0006812 GO:0006826 GO:0006855 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008324 GO:0009266 GO:0009314 GO:0009408 GO:0009416 GO:0009605 GO:0009607 GO:0009624 GO:0009628 GO:0009642 GO:0009646 GO:0009653 GO:0009719 GO:0009725 GO:0009737 GO:0010015 GO:0010033 GO:0012505 GO:0015075 GO:0015238 GO:0015318 GO:0015893 GO:0017119 GO:0022603 GO:0022622 GO:0022857 GO:0022890 GO:0030001 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0032991 GO:0033993 GO:0034220 GO:0034755 GO:0042221 GO:0042493 GO:0042592 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0046915 GO:0048364 GO:0048731 GO:0048856 GO:0048878 GO:0050789 GO:0050793 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055085 GO:0065007 GO:0065008 GO:0097305 GO:0097708 GO:0098655 GO:0098660 GO:0098662 GO:0098771 GO:0099023 GO:0099402 GO:1901700 GO:1905392 GO:1905428

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

548

Amino Acids

59.86

Weight (kDa)

6.39

Isoelectric Point (pI)

36.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MatE	PF01554	57 - 217	2.1e-37	MatE
MatE	PF01554	278 - 440	3e-35	MatE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0015327)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G58340
fragaria_vesca	FvH4_5g33670
malus_domestica	MD08G1209800.v1.1 MD15G1393900.v1.1
pyrus_communis	pycom08g18100 pycom15g35380
rosa_chinensis	RchiOBHm_Chr7g0232641
rosa_laevigata	RLG00000001319
rosa_multiflora	Rmu_sc0005034.1_g000008
rosa_roxburghii	Rroxscaffold_3G00228070
rosa_rugosa	Rorug07G0275900
rosa_samantha	Rh7AG430200 Rh7BG403700 Rh7CG449100 Rh7DG419900
rosa_wichuraiana	Rw7G035540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1039, 1528
AccB1I	GGYRCC	1 cut(s)	353
AccB7I	CCANNNNNTGG	2 cut(s)	363, 702
AccIII	TCCGGA	1 cut(s)	680
AciI	CCGC	5 cut(s)	339, 1170, 1233, 1376, 1464
AclWI	GGATC	1 cut(s)	102
AcoI	YGGCCR	3 cut(s)	113, 472, 900
AcsI	RAATTY	1 cut(s)	643
AcuI	CTGAAG	2 cut(s)	371, 1622
AcyI	GRCGYC	1 cut(s)	354
AfiI	CCNNNNNNNGG	9 cut(s)	338, 363, 438, 481, 655, 702, 1190, 1265, 1359
AgsI	TTSAA	6 cut(s)	37, 445, 927, 1439, 1488, 1625
AjnI	CCWGG	1 cut(s)	770
AjuI	GAANNNNNNNTTGG	2 cut(s)	448, 480
AluBI	AGCT	9 cut(s)	244, 250, 347, 370, 786, 1165, 1204, 1459, 1597
AluI	AGCT	9 cut(s)	244, 250, 347, 370, 786, 1165, 1204, 1459, 1597
Alw21I	GWGCWC	5 cut(s)	252, 788, 1167, 1421, 1461
Alw26I	GTCTC	5 cut(s)	191, 816, 997, 1063, 1111
Alw44I	GTGCAC	1 cut(s)	1417
AlwI	GGATC	1 cut(s)	102
Aor13HI	TCCGGA	1 cut(s)	680
AoxI	GGCC	6 cut(s)	113, 376, 472, 900, 1020, 1084
ApaLI	GTGCAC	1 cut(s)	1417
ApeKI	GCWGC	1 cut(s)	1230
ApoI	RAATTY	1 cut(s)	643
Asp700I	GAANNNNTTC	1 cut(s)	719
AspLEI	GCGC	3 cut(s)	356, 1253, 1394
AspS9I	GGNCC	4 cut(s)	167, 1020, 1287, 1630
AsuC2I	CCSGG	3 cut(s)	800, 1192, 1354
AsuHPI	GGTGA	6 cut(s)	251, 280, 545, 1159, 1453, 1515
AvaII	GGWCC	3 cut(s)	167, 1287, 1630
BaeGI	GKGCMC	1 cut(s)	1421
BalI	TGGCCA	3 cut(s)	115, 474, 902
BanI	GGYRCC	1 cut(s)	353
BanII	GRGCYC	6 cut(s)	252, 788, 1167, 1197, 1359, 1461
BauI	CACGAG	1 cut(s)	653
Bbv12I	GWGCWC	5 cut(s)	252, 788, 1167, 1421, 1461
BbvI	GCAGC	1 cut(s)	1217
BccI	CCATC	7 cut(s)	105, 185, 428, 623, 798, 979, 1426
BciT130I	CCWGG	1 cut(s)	772
BcnI	CCSGG	3 cut(s)	800, 1192, 1354
BcoDI	GTCTC	5 cut(s)	191, 816, 997, 1063, 1111
BfaI	CTAG	2 cut(s)	374, 1091
BfmI	CTRYAG	1 cut(s)	1611
BfoI	RGCGCY	1 cut(s)	357
BfuAI	ACCTGC	2 cut(s)	1039, 1528
BisI	GCNGC	3 cut(s)	1231, 1234, 1377
BlsI	GCNGC	3 cut(s)	1232, 1235, 1378
Bme1390I	CCNGG	4 cut(s)	772, 800, 1192, 1354
Bme18I	GGWCC	3 cut(s)	167, 1287, 1630
BmgT120I	GGNCC	4 cut(s)	167, 1020, 1287, 1630
BmiI	GGNNCC	7 cut(s)	330, 355, 1021, 1270, 1288, 1387, 1632
BmrFI	CCNGG	4 cut(s)	772, 800, 1192, 1354
BmsI	GCATC	2 cut(s)	594, 1578
BplI	GAGNNNNNCTC	4 cut(s)	249, 281, 476, 508
Bpu10I	CCTNAGC	1 cut(s)	90
BpuEI	CTTGAG	4 cut(s)	266, 592, 1181, 1365
BpuMI	CCSGG	3 cut(s)	800, 1192, 1354
BsaHI	GRCGYC	1 cut(s)	354
BsaI	GGTCTC	1 cut(s)	191
BsaJI	CCNNGG	8 cut(s)	126, 226, 235, 318, 696, 771, 799, 985
BsaWI	WCCGGW	1 cut(s)	680
BsaXI	ACNNNNNCTCC	2 cut(s)	752, 782
Bsc4I	CCNNNNNNNGG	9 cut(s)	338, 363, 438, 481, 655, 702, 1190, 1265, 1359
Bse118I	RCCGGY	2 cut(s)	290, 1226
Bse1I	ACTGG	1 cut(s)	187
Bse3DI	GCAATG	3 cut(s)	1015, 1173, 1178
BseAI	TCCGGA	1 cut(s)	680
BseBI	CCWGG	1 cut(s)	772
BseDI	CCNNGG	8 cut(s)	126, 226, 235, 318, 696, 771, 799, 985
BseGI	GGATG	4 cut(s)	420, 809, 1437, 1597
BseLI	CCNNNNNNNGG	9 cut(s)	338, 363, 438, 481, 655, 702, 1190, 1265, 1359
BseMI	GCAATG	3 cut(s)	1015, 1173, 1178
BseMII	CTCAG	2 cut(s)	104, 507
BseNI	ACTGG	1 cut(s)	187
BseRI	GAGGAG	2 cut(s)	497, 641
BseSI	GKGCMC	1 cut(s)	1421
BseXI	GCAGC	1 cut(s)	1217
BshFI	GGCC	6 cut(s)	115, 378, 474, 902, 1022, 1086
BshNI	GGYRCC	1 cut(s)	353
BsiHKAI	GWGCWC	5 cut(s)	252, 788, 1167, 1421, 1461
BsiSI	CCGG	7 cut(s)	255, 291, 681, 799, 1191, 1227, 1353
BslI	CCNNNNNNNGG	9 cut(s)	338, 363, 438, 481, 655, 702, 1190, 1265, 1359
BsmAI	GTCTC	5 cut(s)	191, 816, 997, 1063, 1111
BsmBI	CGTCTC	2 cut(s)	816, 1063
BsnI	GGCC	6 cut(s)	115, 378, 474, 902, 1022, 1086
Bso31I	GGTCTC	1 cut(s)	191
Bsp1286I	GDGCHC	7 cut(s)	252, 788, 1167, 1197, 1359, 1421, 1461
Bsp13I	TCCGGA	1 cut(s)	680
Bsp143I	GATC	3 cut(s)	94, 210, 1053
Bsp19I	CCATGG	2 cut(s)	318, 696
BspACI	CCGC	5 cut(s)	339, 1170, 1233, 1376, 1464
BspANI	GGCC	6 cut(s)	115, 378, 474, 902, 1022, 1086
BspCNI	CTCAG	2 cut(s)	103, 506
BspEI	TCCGGA	1 cut(s)	680
BspHI	TCATGA	2 cut(s)	48, 876
BspLI	GGNNCC	7 cut(s)	330, 355, 1021, 1270, 1288, 1387, 1632
BspMAI	CTGCAG	1 cut(s)	1615
BspMI	ACCTGC	2 cut(s)	1039, 1528
BspPI	GGATC	1 cut(s)	102
BspT107I	GGYRCC	1 cut(s)	353
BspTNI	GGTCTC	1 cut(s)	191
BsrDI	GCAATG	3 cut(s)	1015, 1173, 1178
BsrFI	RCCGGY	2 cut(s)	290, 1226
BsrI	ACTGG	1 cut(s)	187
BssAI	RCCGGY	2 cut(s)	290, 1226
BssECI	CCNNGG	8 cut(s)	126, 226, 235, 318, 696, 771, 799, 985
BssMI	GATC	3 cut(s)	94, 210, 1053
BssNI	GRCGYC	1 cut(s)	354
BssSI	CACGAG	1 cut(s)	653
BssT1I	CCWWGG	3 cut(s)	318, 696, 985
Bst2BI	CACGAG	1 cut(s)	653
Bst2UI	CCWGG	1 cut(s)	772
Bst4CI	ACNGT	1 cut(s)	397
Bst6I	CTCTTC	5 cut(s)	25, 446, 521, 539, 725
BstACI	GRCGYC	1 cut(s)	354
BstAPI	GCANNNNNTGC	1 cut(s)	920
BstC8I	GCNNGC	5 cut(s)	252, 819, 1202, 1307, 1374
BstDEI	CTNAG	4 cut(s)	90, 493, 980, 1241
BstDSI	CCRYGG	2 cut(s)	318, 696
BstF5I	GGATG	4 cut(s)	420, 809, 1437, 1597
BstH2I	RGCGCY	1 cut(s)	357
BstHHI	GCGC	3 cut(s)	356, 1253, 1394
BstKTI	GATC	3 cut(s)	97, 213, 1056
BstMAI	GTCTC	5 cut(s)	191, 816, 997, 1063, 1111
BstMBI	GATC	3 cut(s)	94, 210, 1053
BstMWI	GCNNNNNNNGC	4 cut(s)	353, 792, 920, 1201
BstNI	CCWGG	1 cut(s)	772
BstNSI	RCATGY	1 cut(s)	1309
BstSCI	CCNGG	4 cut(s)	770, 798, 1190, 1352
BstSFI	CTRYAG	1 cut(s)	1611
BstSLI	GKGCMC	1 cut(s)	1421
BstV1I	GCAGC	1 cut(s)	1217
BstXI	CCANNNNNNTGG	3 cut(s)	325, 697, 1324
BsuRI	GGCC	6 cut(s)	115, 378, 474, 902, 1022, 1086
BtgI	CCRYGG	2 cut(s)	318, 696
BtsCI	GGATG	4 cut(s)	420, 809, 1437, 1597
BtsI	GCAGTG	1 cut(s)	1620
BtsIMutI	CAGTG	2 cut(s)	180, 1620
BveI	ACCTGC	2 cut(s)	1039, 1528
Cac8I	GCNNGC	5 cut(s)	252, 819, 1202, 1307, 1374
CciI	TCATGA	2 cut(s)	48, 876
CfoI	GCGC	3 cut(s)	356, 1253, 1394
Cfr10I	RCCGGY	2 cut(s)	290, 1226
Cfr13I	GGNCC	4 cut(s)	167, 1020, 1287, 1630
CspCI	CAANNNNNGTGG	4 cut(s)	937, 972, 985, 1020
DdeI	CTNAG	4 cut(s)	90, 493, 980, 1241
DinI	GGCGCC	1 cut(s)	355
DpnI	GATC	3 cut(s)	96, 212, 1055
DpnII	GATC	3 cut(s)	94, 210, 1053
EaeI	YGGCCR	3 cut(s)	113, 472, 900
Eam1104I	CTCTTC	5 cut(s)	25, 446, 521, 539, 725
EarI	CTCTTC	5 cut(s)	25, 446, 521, 539, 725
Ecl136II	GAGCTC	4 cut(s)	250, 786, 1165, 1459
Eco130I	CCWWGG	3 cut(s)	318, 696, 985
Eco147I	AGGCCT	2 cut(s)	378, 1086
Eco24I	GRGCYC	6 cut(s)	252, 788, 1167, 1197, 1359, 1461
Eco31I	GGTCTC	1 cut(s)	191
Eco47I	GGWCC	3 cut(s)	167, 1287, 1630
Eco53kI	GAGCTC	4 cut(s)	250, 786, 1165, 1459
Eco57I	CTGAAG	2 cut(s)	371, 1622
EcoICRI	GAGCTC	4 cut(s)	250, 786, 1165, 1459
EcoO109I	RGGNCCY	1 cut(s)	1287
EcoRII	CCWGG	1 cut(s)	770
EcoT14I	CCWWGG	3 cut(s)	318, 696, 985
EcoT22I	ATGCAT	1 cut(s)	1571
EcoT38I	GRGCYC	6 cut(s)	252, 788, 1167, 1197, 1359, 1461
EgeI	GGCGCC	1 cut(s)	355
EheI	GGCGCC	1 cut(s)	355
ErhI	CCWWGG	3 cut(s)	318, 696, 985
Esp3I	CGTCTC	2 cut(s)	816, 1063
Fnu4HI	GCNGC	3 cut(s)	1231, 1234, 1377
FokI	GGATG	4 cut(s)	407, 816, 1444, 1604
FriOI	GRGCYC	6 cut(s)	252, 788, 1167, 1197, 1359, 1461
Fsp4HI	GCNGC	3 cut(s)	1231, 1234, 1377
FspBI	CTAG	2 cut(s)	374, 1091
GlaI	GCGC	3 cut(s)	355, 1252, 1393
GluI	GCNGC	3 cut(s)	1231, 1234, 1377
HaeII	RGCGCY	1 cut(s)	357
HaeIII	GGCC	6 cut(s)	115, 378, 474, 902, 1022, 1086
HapII	CCGG	7 cut(s)	255, 291, 681, 799, 1191, 1227, 1353
HhaI	GCGC	3 cut(s)	356, 1253, 1394
Hin1I	GRCGYC	1 cut(s)	354
Hin6I	GCGC	3 cut(s)	354, 1251, 1392
HinP1I	GCGC	3 cut(s)	354, 1251, 1392
HindIII	AAGCTT	2 cut(s)	345, 368
HinfI	GANTC	8 cut(s)	312, 456, 523, 564, 767, 990, 1044, 1134
HpaII	CCGG	7 cut(s)	255, 291, 681, 799, 1191, 1227, 1353
HphI	GGTGA	6 cut(s)	251, 280, 545, 1159, 1453, 1515
Hpy166II	GTNNAC	5 cut(s)	705, 760, 893, 1104, 1419
Hpy8I	GTNNAC	5 cut(s)	705, 760, 893, 1104, 1419
Hpy99I	CGWCG	1 cut(s)	1337
HpyAV	CCTTC	5 cut(s)	36, 200, 442, 638, 748
HpyCH4III	ACNGT	1 cut(s)	397
HpyCH4IV	ACGT	1 cut(s)	416
HpyCH4V	TGCA	5 cut(s)	827, 1178, 1419, 1569, 1613
HpyF10VI	GCNNNNNNNGC	4 cut(s)	353, 792, 920, 1201
HpyF3I	CTNAG	4 cut(s)	90, 493, 980, 1241
HpySE526I	ACGT	1 cut(s)	416
Hsp92I	GRCGYC	1 cut(s)	354
HspAI	GCGC	3 cut(s)	354, 1251, 1392
KasI	GGCGCC	1 cut(s)	353
Kpn2I	TCCGGA	1 cut(s)	680
Kzo9I	GATC	3 cut(s)	94, 210, 1053
LmnI	GCTCC	3 cut(s)	791, 1268, 1391
Lsp1109I	GCAGC	1 cut(s)	1217
LweI	GCATC	2 cut(s)	594, 1578
MaeI	CTAG	2 cut(s)	374, 1091
MaeII	ACGT	1 cut(s)	416
MaeIII	GTNAC	1 cut(s)	5
MalI	GATC	3 cut(s)	96, 212, 1055
MboI	GATC	3 cut(s)	94, 210, 1053
MboII	GAAGA	9 cut(s)	12, 392, 463, 508, 526, 542, 712, 1129, 1143
MfeI	CAATTG	2 cut(s)	918, 1263
MhlI	GDGCHC	7 cut(s)	252, 788, 1167, 1197, 1359, 1421, 1461
MlsI	TGGCCA	3 cut(s)	115, 474, 902
MluCI	AATT	8 cut(s)	643, 918, 1002, 1013, 1263, 1279, 1474, 1638
MluNI	TGGCCA	3 cut(s)	115, 474, 902
Mly113I	GGCGCC	1 cut(s)	354
MlyI	GAGTC	3 cut(s)	306, 761, 999
MmeI	TCCRAC	3 cut(s)	194, 645, 1529
Mox20I	TGGCCA	3 cut(s)	115, 474, 902
Mph1103I	ATGCAT	1 cut(s)	1571
MroI	TCCGGA	1 cut(s)	680
MroXI	GAANNNNTTC	1 cut(s)	719
MscI	TGGCCA	3 cut(s)	115, 474, 902
MseI	TTAA	3 cut(s)	660, 1542, 1554
MslI	CAYNNNNRTG	4 cut(s)	323, 695, 881, 1322
Msp20I	TGGCCA	3 cut(s)	115, 474, 902
MspI	CCGG	7 cut(s)	255, 291, 681, 799, 1191, 1227, 1353
MspR9I	CCNGG	4 cut(s)	772, 800, 1192, 1354
MunI	CAATTG	2 cut(s)	918, 1263
MvaI	CCWGG	1 cut(s)	772
MwoI	GCNNNNNNNGC	4 cut(s)	353, 792, 920, 1201
NarI	GGCGCC	1 cut(s)	354
NciI	CCSGG	3 cut(s)	800, 1192, 1354
NcoI	CCATGG	2 cut(s)	318, 696
NdeII	GATC	3 cut(s)	94, 210, 1053
NlaIV	GGNNCC	7 cut(s)	330, 355, 1021, 1270, 1288, 1387, 1632
NmeAIII	GCCGAG	1 cut(s)	207
NsiI	ATGCAT	1 cut(s)	1571
NspI	RCATGY	1 cut(s)	1309
PaeI	GCATGC	1 cut(s)	1309
PagI	TCATGA	2 cut(s)	48, 876
PceI	AGGCCT	2 cut(s)	378, 1086
PdmI	GAANNNNTTC	1 cut(s)	719
PfeI	GAWTC	5 cut(s)	456, 523, 564, 1044, 1134
PflMI	CCANNNNNTGG	2 cut(s)	363, 702
PkrI	GCNGC	3 cut(s)	1232, 1235, 1378
PleI	GAGTC	3 cut(s)	306, 761, 998
PluTI	GGCGCC	1 cut(s)	357
PpsI	GAGTC	3 cut(s)	306, 761, 998
PpuMI	RGGWCCY	1 cut(s)	1287
Psp124BI	GAGCTC	4 cut(s)	252, 788, 1167, 1461
Psp5II	RGGWCCY	1 cut(s)	1287
Psp6I	CCWGG	1 cut(s)	770
PspGI	CCWGG	1 cut(s)	770
PspN4I	GGNNCC	7 cut(s)	330, 355, 1021, 1270, 1288, 1387, 1632
PspPI	GGNCC	4 cut(s)	167, 1020, 1287, 1630
PspPPI	RGGWCCY	1 cut(s)	1287
PstI	CTGCAG	1 cut(s)	1615
RseI	CAYNNNNRTG	4 cut(s)	323, 695, 881, 1322
SacI	GAGCTC	4 cut(s)	252, 788, 1167, 1461
SaqAI	TTAA	3 cut(s)	660, 1542, 1554
SatI	GCNGC	3 cut(s)	1231, 1234, 1377
Sau3AI	GATC	3 cut(s)	94, 210, 1053
Sau96I	GGNCC	4 cut(s)	167, 1020, 1287, 1630
SchI	GAGTC	3 cut(s)	306, 761, 999
ScrFI	CCNGG	4 cut(s)	772, 800, 1192, 1354
SduI	GDGCHC	7 cut(s)	252, 788, 1167, 1197, 1359, 1421, 1461
SfaNI	GCATC	2 cut(s)	594, 1578
SfcI	CTRYAG	1 cut(s)	1611
SfoI	GGCGCC	1 cut(s)	355
SinI	GGWCC	3 cut(s)	167, 1287, 1630
SmiMI	CAYNNNNRTG	4 cut(s)	323, 695, 881, 1322
SmlI	CTYRAG	4 cut(s)	245, 571, 1160, 1380
SmoI	CTYRAG	4 cut(s)	245, 571, 1160, 1380
SphI	GCATGC	1 cut(s)	1309
Sse9I	AATT	8 cut(s)	643, 918, 1002, 1013, 1263, 1279, 1474, 1638
SseBI	AGGCCT	2 cut(s)	378, 1086
SsiI	CCGC	5 cut(s)	339, 1170, 1233, 1376, 1464
SspDI	GGCGCC	1 cut(s)	353
SspI	AATATT	1 cut(s)	1552
SspMI	CTAG	2 cut(s)	374, 1091
SstI	GAGCTC	4 cut(s)	252, 788, 1167, 1461
StuI	AGGCCT	2 cut(s)	378, 1086
StyD4I	CCNGG	4 cut(s)	770, 798, 1190, 1352
StyI	CCWWGG	3 cut(s)	318, 696, 985
TaaI	ACNGT	1 cut(s)	397
TaiI	ACGT	1 cut(s)	419
TaqI	TCGA	2 cut(s)	521, 1049
TasI	AATT	8 cut(s)	643, 918, 1002, 1013, 1263, 1279, 1474, 1638
TauI	GCSGC	2 cut(s)	1236, 1379
TfiI	GAWTC	5 cut(s)	456, 523, 564, 1044, 1134
Tru1I	TTAA	3 cut(s)	660, 1542, 1554
Tru9I	TTAA	3 cut(s)	660, 1542, 1554
TscAI	CASTG	2 cut(s)	187, 1620
TseI	GCWGC	1 cut(s)	1230
TspDTI	ATGAA	9 cut(s)	37, 65, 93, 424, 464, 499, 620, 865, 1026
TspGWI	ACGGA	2 cut(s)	1166, 1643
TspRI	CASTG	2 cut(s)	187, 1620
Van91I	CCANNNNNTGG	2 cut(s)	363, 702
VneI	GTGCAC	1 cut(s)	1417
VpaK11BI	GGWCC	3 cut(s)	167, 1287, 1630
XapI	RAATTY	1 cut(s)	643
XceI	RCATGY	1 cut(s)	1309
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1279, 1475
XmnI	GAANNNNTTC	1 cut(s)	719
XspI	CTAG	2 cut(s)	374, 1091
Zsp2I	ATGCAT	1 cut(s)	1571

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.