Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0006439

Physical Location & Seq

Genomic Coordinates Forward (+)

49836749 .. 49841922

Gene Structure 5174 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1397900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1902 bp

ATGGGCTGCCTTTGCTCAAAAGCTACATCGCAAGAGGAAATGGCGAAGGAATCCGATACAGTAGAACGCCCATTGAAGGATTATTCGGTTCAGTTGATTGCTCCTACTCCCTCATTGAGAGATGACATTGTAGCAGAAGTAGGTGGTGGCGGTGGTGGGGCCGACGGGTCAGTGCGCAGGTTATCAAGAACAGCCTCAAAAGCAAATGTGGGGAACAATGCTGGTAAAGATGATCATAATAAAACCAAAGTCATCTCAAGGCTAGGGATTTTGAATCATCAAAGAGGGGCAACCCTGGATTTAGGAGCAAGTGAAAGGGAAACTGTGATGTCTAGGATAGTAAGCATGCCACATGGGGCAAAAGGAGAACAAACTGCTGCTGGATGGCCGTCGTGGCTAACTTCGGTTGCAGGAGATGCCATCAAAGGGTGGGTGCCTCGACGGGCAGACTCCTTTGAAAAGTTAGACAAAATTGGACAAGGAACTTATAGCAGTGTATACAAAGCTCGCGACCTGGAAACTGGTAAAATCGTTGCATTGAAGAAAGTACGATTTGTAAATATGGACCCAGAAAGTGTTCGCTTTATGGCAAGAGAAATCTTAATTTTACGCAGACTTAATCACCCAAATGTTATGAAGCTCGAGGGTCTAGTCACTTCAAGAATGTCATGCAACTTATACCTTGTCTTTGAGTATATGGAACATGACCTTGCTGGTCTAGCAGCAACACGTGGCATCAAGTTTACTGAACCACAGATAAAATGTTATATGCAACAATTGCTTCGTGGACTAGAACACTGTCATAGTCAAGGTGTCCTGCACCGAGATATCAAGGGTTCAAATCTTTTGCTTGACAACAACGGAACTCTCAAGATAGGCGACTTTGGTCTGGCGACCTTTTATGAGCCTGATCAAAAGCAGCCATTAACAAGTCGTGTTGTGACACTGTGGTATAGGGCACCTGAACTTTTGCTTGGTTCTACTGAGTATGGAGTTTCTATAGATCTATGGAGCACTGGCTGTATCCTAGCGGAAATGTTTGCTGGAAAGCCTATCATGCCTGGCAGAACAGAGGTGGAACAAATGCATAAAATTTTTAAGCTTTGTGGTTCACCATCCGAGGAATTCTGGAAGAAAACAAAGTTACCCCTCGCAACTAGTTTCAAACCTCAACAACCTTACAAGCGTCGTATTGCAGATACTTTCAAGGACTTCCCTCCTTCAGCTTTGGGGCTTATTGAAAAACTCCTTGCAATAGAACCAGAGACTCGGGGATCGGCTGCTTCAGCGCTTACTAGTGAGTTCTTCAGTACACATCCTCTACCTTGTGATCCAGCAGATCTACCAAAATATCCTCCAAGCAAAGAGTTTGATGCAAAGCTTCGGGATGAGGAAAAACGGCGAAAAGCCGATGCGTTTAAAGGGGGTTCAAGAGATACCAAGGGGCCATCACCAGAATTTAATGTTCAGGGAGATGTATCTTTGCAGGGACAGAGAAACCTGAAAACGACAGGTCACAAGTACACGCCCCAGCGAGATAGTGTCTCTGGCTTTGCAATGGAACCACCTGGAGGAGCGAGACCAAATGGGTACTCTCTTTGTAGTTCAATGGTACACCCTAGTGCAGTTGGATCATCATTGAATAAGACAGCAGGTTATACAAGTAGGCCAGAGTTAAAGTCGCAGAGATCTCACATGCCTCAAGCTGCAGCAGACTTATCAAGTTCTTCCAGTAAGAAAGATGAAACAGTGGCTAGCAAAGAATCCAGAAGGTGCTATGTACCTAAGAACAGAATCCATTACTCTGGACCATTGGTGCCTCCGGGGGGAAATCTTGAGGACATGCTCAAAGAGCACGAAAGACAAATCCAGCATGCTGTACGTAAAGCACGAGCACGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051726 GO:0065007 GO:0071704 GO:0071944 GO:0097472 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

634

Amino Acids

69.74

Weight (kDa)

9.32

Isoelectric Point (pI)

49.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	152 - 436	1.5e-69	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	155 - 365	2.6e-31	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006439)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33770 AT1G71530 AT1G71530 AT1G71530 AT1G71530 AT4G10010 AT4G10010
fragaria_vesca	FvH4_5g33160 FvH4_5g33160
malus_domestica	MD08G1214900.v1.1 MD15G1397900.v1.1
prunus_persica	Prupe.1G546300_v2.0.a1 Prupe.1G546300_v2.0.a1
pyrus_communis	pycom15g35760
rosa_chinensis	RchiOBHm_Chr7g0231421
rosa_laevigata	RLG00000001418
rosa_multiflora	Rmu_sc0003396.1_g000031 Rmu_sc0010066.1_g000001
rosa_roxburghii	Rroxscaffold_3G00229330
rosa_rugosa	Rorug07G0266500 Rorug07G0266500
rosa_samantha	Rh7AG420800 Rh7BG395200 Rh7CG440900 Rh7DG413400
rosa_wichuraiana	Rw7G034720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	176
Acc36I	ACCTGC	2 cut(s)	168, 1643
AccB1I	GGYRCC	3 cut(s)	433, 958, 1816
AccI	GTMKAC	1 cut(s)	498
AccII	CGCG	1 cut(s)	510
AciI	CCGC	2 cut(s)	150, 1031
AclWI	GGATC	3 cut(s)	1282, 1325, 1639
AcoI	YGGCCR	1 cut(s)	386
AcsI	RAATTY	3 cut(s)	1092, 1124, 1457
AcuI	CTGAAG	3 cut(s)	1206, 1269, 1291
AcvI	CACGTG	1 cut(s)	731
AfaI	GTAC	7 cut(s)	549, 1312, 1523, 1592, 1614, 1782, 1881
AfeI	AGCGCT	1 cut(s)	1290
AfiI	CCNNNNNNNGG	4 cut(s)	76, 426, 1571, 1826
AflIII	ACRYGT	1 cut(s)	728
AhlI	ACTAGT	2 cut(s)	1157, 1295
AjnI	CCWGG	4 cut(s)	294, 513, 1060, 1567
AjuI	GAANNNNNNNTTGG	2 cut(s)	957, 989
AleI	CACNNNNGTG	1 cut(s)	1620
AluBI	AGCT	7 cut(s)	23, 506, 640, 1102, 1226, 1381, 1706
AluI	AGCT	7 cut(s)	23, 506, 640, 1102, 1226, 1381, 1706
Alw21I	GWGCWC	3 cut(s)	1016, 1857, 1897
Alw26I	GTCTC	3 cut(s)	1259, 1549, 1573
AlwI	GGATC	3 cut(s)	1282, 1325, 1639
Ama87I	CYCGRG	2 cut(s)	641, 1269
Aor51HI	AGCGCT	1 cut(s)	1290
AoxI	GGCC	4 cut(s)	159, 386, 1445, 1667
ApeKI	GCWGC	7 cut(s)	6, 377, 722, 919, 1280, 1706, 1709
ApoI	RAATTY	3 cut(s)	1092, 1124, 1457
Asp700I	GAANNNNTTC	1 cut(s)	576
AspLEI	GCGC	2 cut(s)	177, 1291
AspS9I	GGNCC	4 cut(s)	159, 565, 1445, 1808
AsuC2I	CCSGG	1 cut(s)	1824
AsuHPI	GGTGA	3 cut(s)	614, 1104, 1443
AsuNHI	GCTAGC	1 cut(s)	1754
AvaI	CYCGRG	2 cut(s)	641, 1269
AvaII	GGWCC	2 cut(s)	565, 1808
BaeGI	GKGCMC	1 cut(s)	961
BanI	GGYRCC	3 cut(s)	433, 958, 1816
BauI	CACGAG	1 cut(s)	1890
BbrPI	CACGTG	1 cut(s)	731
Bbv12I	GWGCWC	3 cut(s)	1016, 1857, 1897
BbvI	GCAGC	6 cut(s)	364, 734, 931, 1267, 1693, 1721
BccI	CCATC	4 cut(s)	378, 428, 1123, 1456
BceAI	ACGGC	2 cut(s)	373, 1415
BciT130I	CCWGG	4 cut(s)	296, 515, 1062, 1569
BciVI	GTATCC	1 cut(s)	1034
BclI	TGATCA	2 cut(s)	232, 910
BcnI	CCSGG	1 cut(s)	1824
BcoDI	GTCTC	3 cut(s)	1259, 1549, 1573
BcuI	ACTAGT	2 cut(s)	1157, 1295
BfmI	CTRYAG	2 cut(s)	999, 1707
BfoI	RGCGCY	1 cut(s)	1292
BfuAI	ACCTGC	2 cut(s)	168, 1643
BfuI	GTATCC	1 cut(s)	1034
BglI	GCCNNNNNGGC	1 cut(s)	394
BglII	AGATCT	3 cut(s)	1003, 1339, 1688
BisI	GCNGC	7 cut(s)	7, 378, 723, 920, 1281, 1707, 1710
BlsI	GCNGC	7 cut(s)	8, 379, 724, 921, 1282, 1708, 1711
Bme1390I	CCNGG	5 cut(s)	296, 515, 1062, 1569, 1824
Bme18I	GGWCC	2 cut(s)	565, 1808
BmeT110I	CYCGRG	2 cut(s)	641, 1269
BmgT120I	GGNCC	4 cut(s)	159, 565, 1445, 1808
BmiI	GGNNCC	7 cut(s)	160, 435, 567, 960, 1446, 1563, 1818
BmrFI	CCNGG	5 cut(s)	296, 515, 1062, 1569, 1824
BmsI	GCATC	4 cut(s)	406, 744, 1363, 1402
BmtI	GCTAGC	1 cut(s)	1758
BoxI	GACNNNNGTC	1 cut(s)	885
BpmI	CTGGAG	1 cut(s)	1590
BpuEI	CTTGAG	4 cut(s)	241, 854, 1686, 1856
BpuMI	CCSGG	1 cut(s)	1824
BsaAI	YACGTR	2 cut(s)	731, 1883
BsaI	GGTCTC	1 cut(s)	1573
BsaJI	CCNNGG	4 cut(s)	294, 1119, 1440, 1823
Bsc4I	CCNNNNNNNGG	4 cut(s)	76, 426, 1571, 1826
Bse1I	ACTGG	3 cut(s)	526, 1021, 1731
Bse3DI	GCAATG	1 cut(s)	1563
BseBI	CCWGG	4 cut(s)	296, 515, 1062, 1569
BseDI	CCNNGG	4 cut(s)	294, 1119, 1440, 1823
BseGI	GGATG	4 cut(s)	389, 1115, 1315, 1393
BseLI	CCNNNNNNNGG	4 cut(s)	76, 426, 1571, 1826
BseMI	GCAATG	1 cut(s)	1563
BseMII	CTCAG	1 cut(s)	975
BseNI	ACTGG	3 cut(s)	526, 1021, 1731
BseRI	GAGGAG	1 cut(s)	1587
BseSI	GKGCMC	1 cut(s)	961
BseXI	GCAGC	6 cut(s)	364, 734, 931, 1267, 1693, 1721
BseYI	CCCAGC	1 cut(s)	1530
BsgI	GTGCAG	2 cut(s)	803, 1644
Bsh1236I	CGCG	1 cut(s)	510
BshFI	GGCC	4 cut(s)	161, 388, 1447, 1669
BshNI	GGYRCC	3 cut(s)	433, 958, 1816
BsiHKAI	GWGCWC	3 cut(s)	1016, 1857, 1897
BsiHKCI	CYCGRG	2 cut(s)	641, 1269
BsiSI	CCGG	1 cut(s)	1823
BslFI	GGGAC	1 cut(s)	1503
BslI	CCNNNNNNNGG	4 cut(s)	76, 426, 1571, 1826
BsmAI	GTCTC	3 cut(s)	1259, 1549, 1573
BsmFI	GGGAC	1 cut(s)	1503
BsnI	GGCC	4 cut(s)	161, 388, 1447, 1669
Bso31I	GGTCTC	1 cut(s)	1573
BsoBI	CYCGRG	2 cut(s)	641, 1269
Bsp1286I	GDGCHC	4 cut(s)	961, 1016, 1857, 1897
Bsp143I	GATC	8 cut(s)	232, 910, 1003, 1274, 1330, 1339, 1631, 1688
Bsp68I	TCGCGA	1 cut(s)	510
BspACI	CCGC	2 cut(s)	150, 1031
BspANI	GGCC	4 cut(s)	161, 388, 1447, 1669
BspCNI	CTCAG	1 cut(s)	976
BspFNI	CGCG	1 cut(s)	510
BspLI	GGNNCC	7 cut(s)	160, 435, 567, 960, 1446, 1563, 1818
BspMAI	CTGCAG	1 cut(s)	1711
BspMI	ACCTGC	2 cut(s)	168, 1643
BspOI	GCTAGC	1 cut(s)	1758
BspPI	GGATC	3 cut(s)	1282, 1325, 1639
BspT107I	GGYRCC	3 cut(s)	433, 958, 1816
BspTNI	GGTCTC	1 cut(s)	1573
BsrDI	GCAATG	1 cut(s)	1563
BsrI	ACTGG	3 cut(s)	526, 1021, 1731
BssECI	CCNNGG	4 cut(s)	294, 1119, 1440, 1823
BssMI	GATC	8 cut(s)	232, 910, 1003, 1274, 1330, 1339, 1631, 1688
BssNAI	GTATAC	1 cut(s)	499
BssSI	CACGAG	1 cut(s)	1890
BssT1I	CCWWGG	1 cut(s)	1440
Bst1107I	GTATAC	1 cut(s)	499
Bst2BI	CACGAG	1 cut(s)	1890
Bst2UI	CCWGG	4 cut(s)	296, 515, 1062, 1569
Bst4CI	ACNGT	5 cut(s)	61, 325, 800, 948, 1750
BstAPI	GCANNNNNTGC	2 cut(s)	416, 778
BstBAI	YACGTR	2 cut(s)	731, 1883
BstC8I	GCNNGC	4 cut(s)	347, 508, 1756, 1875
BstDEI	CTNAG	2 cut(s)	984, 1785
BstF5I	GGATG	4 cut(s)	389, 1115, 1315, 1393
BstFNI	CGCG	1 cut(s)	510
BstH2I	RGCGCY	1 cut(s)	1292
BstHHI	GCGC	2 cut(s)	177, 1291
BstKTI	GATC	8 cut(s)	235, 913, 1006, 1277, 1333, 1342, 1634, 1691
BstMAI	GTCTC	3 cut(s)	1259, 1549, 1573
BstMBI	GATC	8 cut(s)	232, 910, 1003, 1274, 1330, 1339, 1631, 1688
BstMWI	GCNNNNNNNGC	9 cut(s)	12, 200, 394, 416, 719, 778, 1057, 1286, 1852
BstNI	CCWGG	4 cut(s)	296, 515, 1062, 1569
BstNSI	RCATGY	4 cut(s)	349, 1699, 1846, 1877
BstPAI	GACNNNNGTC	1 cut(s)	885
BstSCI	CCNGG	5 cut(s)	294, 513, 1060, 1567, 1822
BstSFI	CTRYAG	2 cut(s)	999, 1707
BstSLI	GKGCMC	1 cut(s)	961
BstSNI	TACGTA	1 cut(s)	1883
BstUI	CGCG	1 cut(s)	510
BstV1I	GCAGC	6 cut(s)	364, 734, 931, 1267, 1693, 1721
BstX2I	RGATCY	3 cut(s)	1003, 1339, 1688
BstXI	CCANNNNNNTGG	1 cut(s)	1805
BstYI	RGATCY	3 cut(s)	1003, 1339, 1688
BstZ17I	GTATAC	1 cut(s)	499
BsuI	GTATCC	1 cut(s)	1034
BsuRI	GGCC	4 cut(s)	161, 388, 1447, 1669
BtgZI	GCGATG	1 cut(s)	12
BtsCI	GGATG	4 cut(s)	389, 1115, 1315, 1393
BtsI	GCAGTG	1 cut(s)	499
BtsIMutI	CAGTG	6 cut(s)	177, 499, 796, 944, 1014, 1755
BtuMI	TCGCGA	1 cut(s)	510
BveI	ACCTGC	2 cut(s)	168, 1643
Cac8I	GCNNGC	4 cut(s)	347, 508, 1756, 1875
CfoI	GCGC	2 cut(s)	177, 1291
Cfr13I	GGNCC	4 cut(s)	159, 565, 1445, 1808
CseI	GACGC	1 cut(s)	1175
Csp6I	GTAC	7 cut(s)	548, 1311, 1522, 1591, 1613, 1781, 1880
CviAII	CATG	8 cut(s)	346, 353, 669, 704, 1057, 1696, 1843, 1874
CviQI	GTAC	7 cut(s)	548, 1311, 1522, 1591, 1613, 1781, 1880
DdeI	CTNAG	2 cut(s)	984, 1785
DpnI	GATC	8 cut(s)	234, 912, 1005, 1276, 1332, 1341, 1633, 1690
DpnII	GATC	8 cut(s)	232, 910, 1003, 1274, 1330, 1339, 1631, 1688
DraI	TTTAAA	1 cut(s)	1420
EaeI	YGGCCR	1 cut(s)	386
Eco105I	TACGTA	1 cut(s)	1883
Eco130I	CCWWGG	1 cut(s)	1440
Eco31I	GGTCTC	1 cut(s)	1573
Eco32I	GATATC	1 cut(s)	829
Eco47I	GGWCC	2 cut(s)	565, 1808
Eco47III	AGCGCT	1 cut(s)	1290
Eco57I	CTGAAG	3 cut(s)	1206, 1269, 1291
Eco72I	CACGTG	1 cut(s)	731
Eco88I	CYCGRG	2 cut(s)	641, 1269
EcoRI	GAATTC	1 cut(s)	1124
EcoRII	CCWGG	4 cut(s)	294, 513, 1060, 1567
EcoRV	GATATC	1 cut(s)	829
EcoT14I	CCWWGG	1 cut(s)	1440
EcoT22I	ATGCAT	1 cut(s)	1089
ErhI	CCWWGG	1 cut(s)	1440
FaeI	CATG	8 cut(s)	349, 356, 672, 707, 1060, 1699, 1846, 1877
FaqI	GGGAC	1 cut(s)	1503
FatI	CATG	8 cut(s)	345, 352, 668, 703, 1056, 1695, 1842, 1873
FbaI	TGATCA	2 cut(s)	232, 910
FblI	GTMKAC	1 cut(s)	498
Fnu4HI	GCNGC	7 cut(s)	7, 378, 723, 920, 1281, 1707, 1710
FokI	GGATG	4 cut(s)	396, 1102, 1302, 1400
Fsp4HI	GCNGC	7 cut(s)	7, 378, 723, 920, 1281, 1707, 1710
FspI	TGCGCA	1 cut(s)	176
GlaI	GCGC	2 cut(s)	176, 1290
GluI	GCNGC	7 cut(s)	7, 378, 723, 920, 1281, 1707, 1710
GsaI	CCCAGC	1 cut(s)	1534
GsuI	CTGGAG	1 cut(s)	1590
HaeII	RGCGCY	1 cut(s)	1292
HaeIII	GGCC	4 cut(s)	161, 388, 1447, 1669
HapII	CCGG	1 cut(s)	1823
HgaI	GACGC	1 cut(s)	1175
HhaI	GCGC	2 cut(s)	177, 1291
Hin1II	CATG	8 cut(s)	349, 356, 672, 707, 1060, 1699, 1846, 1877
Hin6I	GCGC	2 cut(s)	175, 1289
HinP1I	GCGC	2 cut(s)	175, 1289
HindIII	AAGCTT	2 cut(s)	1100, 1379
HinfI	GANTC	6 cut(s)	50, 274, 449, 1267, 1763, 1794
HpaII	CCGG	1 cut(s)	1823
HphI	GGTGA	3 cut(s)	614, 1104, 1443
Hpy166II	GTNNAC	7 cut(s)	499, 744, 788, 1112, 1313, 1524, 1615
Hpy188I	TCNGA	2 cut(s)	55, 1120
Hpy8I	GTNNAC	7 cut(s)	499, 744, 788, 1112, 1313, 1524, 1615
Hpy99I	CGWCG	4 cut(s)	167, 394, 444, 1191
HpyAV	CCTTC	4 cut(s)	40, 70, 1230, 1764
HpyCH4III	ACNGT	5 cut(s)	61, 325, 800, 948, 1750
HpyCH4IV	ACGT	3 cut(s)	730, 1882, 1897
HpyF10VI	GCNNNNNNNGC	9 cut(s)	12, 200, 394, 416, 719, 778, 1057, 1286, 1852
HpyF3I	CTNAG	2 cut(s)	984, 1785
HpySE526I	ACGT	3 cut(s)	730, 1882, 1897
Hsp92II	CATG	8 cut(s)	349, 356, 672, 707, 1060, 1699, 1846, 1877
HspAI	GCGC	2 cut(s)	175, 1289
Ksp22I	TGATCA	2 cut(s)	232, 910
Kzo9I	GATC	8 cut(s)	232, 910, 1003, 1274, 1330, 1339, 1631, 1688
LmnI	GCTCC	4 cut(s)	106, 305, 1011, 1574
Lsp1109I	GCAGC	6 cut(s)	364, 734, 931, 1267, 1693, 1721
LweI	GCATC	4 cut(s)	406, 744, 1363, 1402
MaeII	ACGT	3 cut(s)	730, 1882, 1897
MaeIII	GTNAC	4 cut(s)	652, 940, 1143, 1514
MalI	GATC	8 cut(s)	234, 912, 1005, 1276, 1332, 1341, 1633, 1690
MboI	GATC	8 cut(s)	232, 910, 1003, 1274, 1330, 1339, 1631, 1688
MboII	GAAGA	4 cut(s)	553, 1144, 1297, 1719
MfeI	CAATTG	1 cut(s)	776
MflI	RGATCY	3 cut(s)	1003, 1339, 1688
MhlI	GDGCHC	4 cut(s)	961, 1016, 1857, 1897
MluCI	AATT	6 cut(s)	471, 603, 776, 1092, 1124, 1457
MlyI	GAGTC	2 cut(s)	443, 1261
MmeI	TCCRAC	1 cut(s)	1609
Mph1103I	ATGCAT	1 cut(s)	1089
MroXI	GAANNNNTTC	1 cut(s)	576
MseI	TTAA	7 cut(s)	602, 618, 926, 1098, 1419, 1461, 1676
MslI	CAYNNNNRTG	2 cut(s)	627, 1620
MspI	CCGG	1 cut(s)	1823
MspR9I	CCNGG	5 cut(s)	296, 515, 1062, 1569, 1824
MunI	CAATTG	1 cut(s)	776
MvaI	CCWGG	4 cut(s)	296, 515, 1062, 1569
MvnI	CGCG	1 cut(s)	510
MwoI	GCNNNNNNNGC	9 cut(s)	12, 200, 394, 416, 719, 778, 1057, 1286, 1852
NciI	CCSGG	1 cut(s)	1824
NdeII	GATC	8 cut(s)	232, 910, 1003, 1274, 1330, 1339, 1631, 1688
NheI	GCTAGC	1 cut(s)	1754
NlaIII	CATG	8 cut(s)	349, 356, 672, 707, 1060, 1699, 1846, 1877
NlaIV	GGNNCC	7 cut(s)	160, 435, 567, 960, 1446, 1563, 1818
NmuCI	GTSAC	3 cut(s)	652, 940, 1514
NruI	TCGCGA	1 cut(s)	510
NsbI	TGCGCA	1 cut(s)	176
NsiI	ATGCAT	1 cut(s)	1089
NspI	RCATGY	4 cut(s)	349, 1699, 1846, 1877
OliI	CACNNNNGTG	1 cut(s)	1620
PaeI	GCATGC	2 cut(s)	349, 1877
PaeR7I	CTCGAG	1 cut(s)	641
PcsI	WCGNNNNNNNCGW	1 cut(s)	1888
PdmI	GAANNNNTTC	1 cut(s)	576
PfeI	GAWTC	4 cut(s)	50, 274, 1763, 1794
PkrI	GCNGC	7 cut(s)	8, 379, 724, 921, 1282, 1708, 1711
PleI	GAGTC	2 cut(s)	443, 1261
PmaCI	CACGTG	1 cut(s)	731
PmlI	CACGTG	1 cut(s)	731
PpsI	GAGTC	2 cut(s)	443, 1261
Ppu21I	YACGTR	2 cut(s)	731, 1883
PshAI	GACNNNNGTC	1 cut(s)	885
Psp6I	CCWGG	4 cut(s)	294, 513, 1060, 1567
PspCI	CACGTG	1 cut(s)	731
PspFI	CCCAGC	1 cut(s)	1530
PspGI	CCWGG	4 cut(s)	294, 513, 1060, 1567
PspN4I	GGNNCC	7 cut(s)	160, 435, 567, 960, 1446, 1563, 1818
PspPI	GGNCC	4 cut(s)	159, 565, 1445, 1808
PspXI	VCTCGAGB	1 cut(s)	641
PstI	CTGCAG	1 cut(s)	1711
PsuI	RGATCY	3 cut(s)	1003, 1339, 1688
RruI	TCGCGA	1 cut(s)	510
RsaI	GTAC	7 cut(s)	549, 1312, 1523, 1592, 1614, 1782, 1881
RsaNI	GTAC	7 cut(s)	548, 1311, 1522, 1591, 1613, 1781, 1880
RseI	CAYNNNNRTG	2 cut(s)	627, 1620
SaqAI	TTAA	7 cut(s)	602, 618, 926, 1098, 1419, 1461, 1676
SatI	GCNGC	7 cut(s)	7, 378, 723, 920, 1281, 1707, 1710
Sau3AI	GATC	8 cut(s)	232, 910, 1003, 1274, 1330, 1339, 1631, 1688
Sau96I	GGNCC	4 cut(s)	159, 565, 1445, 1808
SchI	GAGTC	2 cut(s)	443, 1261
ScrFI	CCNGG	5 cut(s)	296, 515, 1062, 1569, 1824
SduI	GDGCHC	4 cut(s)	961, 1016, 1857, 1897
SfaNI	GCATC	4 cut(s)	406, 744, 1363, 1402
SfcI	CTRYAG	2 cut(s)	999, 1707
Sfr274I	CTCGAG	1 cut(s)	641
SinI	GGWCC	2 cut(s)	565, 1808
SlaI	CTCGAG	1 cut(s)	641
SmiMI	CAYNNNNRTG	2 cut(s)	627, 1620
SmlI	CTYRAG	5 cut(s)	256, 641, 869, 1701, 1835
SmoI	CTYRAG	5 cut(s)	256, 641, 869, 1701, 1835
SnaBI	TACGTA	1 cut(s)	1883
SpeI	ACTAGT	2 cut(s)	1157, 1295
SphI	GCATGC	2 cut(s)	349, 1877
Sse9I	AATT	6 cut(s)	471, 603, 776, 1092, 1124, 1457
SsiI	CCGC	2 cut(s)	150, 1031
StyD4I	CCNGG	5 cut(s)	294, 513, 1060, 1567, 1822
StyI	CCWWGG	1 cut(s)	1440
TaaI	ACNGT	5 cut(s)	61, 325, 800, 948, 1750
TaiI	ACGT	3 cut(s)	733, 1885, 1900
TaqI	TCGA	2 cut(s)	439, 642
TasI	AATT	6 cut(s)	471, 603, 776, 1092, 1124, 1457
TatI	WGTACW	2 cut(s)	1310, 1521
TfiI	GAWTC	4 cut(s)	50, 274, 1763, 1794
Tru1I	TTAA	7 cut(s)	602, 618, 926, 1098, 1419, 1461, 1676
Tru9I	TTAA	7 cut(s)	602, 618, 926, 1098, 1419, 1461, 1676
TscAI	CASTG	6 cut(s)	177, 499, 803, 951, 1021, 1755
TseFI	GTSAC	3 cut(s)	652, 940, 1514
TseI	GCWGC	7 cut(s)	6, 377, 722, 919, 1280, 1706, 1709
Tsp45I	GTSAC	3 cut(s)	652, 940, 1514
TspDTI	ATGAA	2 cut(s)	650, 1758
TspGWI	ACGGA	1 cut(s)	876
TspRI	CASTG	6 cut(s)	177, 499, 803, 951, 1021, 1755
VpaK11BI	GGWCC	2 cut(s)	565, 1808
XapI	RAATTY	3 cut(s)	1092, 1124, 1457
XceI	RCATGY	4 cut(s)	349, 1699, 1846, 1877
XhoI	CTCGAG	1 cut(s)	641
XmiI	GTMKAC	1 cut(s)	498
XmnI	GAANNNNTTC	1 cut(s)	576
Zsp2I	ATGCAT	1 cut(s)	1089

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.