Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0006439

Physical Location & Seq

Genomic Coordinates Forward (+)

13807653 .. 13811510

Gene Structure 3858 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00229330.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1761 bp

ATGGGCTGCATTTGCTCGAAAGGAACCTCAGAACCAGAACACGTACAGGATTCTAAGAGAGTAGAAAGTAATTTGAAGGAGTATTCGGTTCAATTGGTTGCTCCAACTCCTTCACTAAGAGATGAGTTTGTATCAGAAGGTGGTGATTCATCAATGCGTTTGTTATCAAGAAACGCTTCCAAAGCAAATGGGAGAATTAGCAATGTGTCTAGAGATCATGAAGATAAATCAAAGGTTCAGAAACCTGGGATTGCTAATCATCAAAGAGGGGCAACAGTGGAAATGGCCGCCAAGGAAAAAAAAGTGGCAATGTCTAGGATAGTGAGCTTGCCACTTGGTCAAGAAGCCTCACAAGCAGCTGCAGGGTGGCCTTCGTGGCTAACTTCAGTTGCCGGAGATGCCATCCAAGGGTGGGTTCCTCGCCGGGCAGACACCTTTGAGAAGCTAGACAAAATCGGACAAGGAACTTATAGCAGTGTATACAAGGCTCGTGATCTTGAAACTGGTAAAATAGTTGCATTGAAGAAAGTACGCTTGAGGGGTCTAGTCGCTTCAACAATGTCATGCAGCTTATATCTTGTGTTCGAGTATATGGATCATGACCTAGCAGGTCTTGCAGCAACACGTGGCATCAAGTTTACTGAACCACAGATAAAATGTTTAGCTCAACAATTGCTTAGTGGCCTTGAACACTGCCATAGTCGAGGTGTCCTGCACCGAGATATCAAGGGTTCTAATCTTTTGATTAATAATGATGGAGTTCTCAAGATTGGTGACTTCGGTTTGGCAACATTTTATGAGCCCGATCAGAAGCAGCCATTAACTAGTCGTGTTGTAACTCTGTGGTATAGGGCACCTGAGCTTCTGCTTGGTGCCACAGAGTATGGTCCGGCAATAGATCTGTGGAGTACAGGCTGTATCCTTGCAGAATTGTTTGCTGGAAAGCCTATCATGCCTGGTAGAACAGAGGTGGAACAAATGCATAAGATTTTCAAGCTCTGTGGTTCACCATCTGAGGACTTCTGGAAGAAAACAAAATTACCACATGCAACTACTTTGGCTCTTGTCGATAAACTCCTCGCCATAGAAGAAGATCATCGAGGATCTGCTGGTTCAGCCCTTAGAAGTGAATTCTTCACTACACCGCCTGTAGCTTGTCATCCATCAGCTTTACCACACTATCCTCCAAGCAAGGAGTTTGATGCCAAGCTTCGGGATGAGGAAAAAAGGCAAAGAGCGGATCCTATTAAAGGGCGTGGTCCTGAATCTGTTAGAAGGGCTTCAAGAGATGCCAAGATAGCACCAACACCAGATTATAATGCCCAAGGAAATATCCAGGGAAAGTCGAACCCGAAATCCATGGGTCACAAGTACATGCCTCACCAGCAGGATAGTGTCTCTGGCTTTGCAATGGAACCACACAGAGGAGCTAGGCAGAATGGTTATTCTCAATGTAGTTCAGTGATACATCCTCGTAGTGCAGTAGGATCATCATTGAATAAGACGACAGCTTCTACAAAACATAAGCCAGAATTAAGGGAGCTGAAATCTCACAAGCCTCTAACTGCAACAGACTTGTTTAATTCTTCCAGTAGGAAGGATGACAGACTGTTTTTCAAAGAATCTGGAATGCGGTACGTACCTCAGAGCAGAATCCATTGCTCTGGACCGTTGGTACCTCCAGGGGGAAACATTGAAGACATGCTCAAAGAGCATGAGAGACACATCCAACAGGCAGTACGTAAAGCTCGTGCACGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051726 GO:0065007 GO:0071704 GO:0071944 GO:0097472 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

586

Amino Acids

64.67

Weight (kDa)

9.4

Isoelectric Point (pI)

49.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PK_Tyr_Ser-Thr	PF07714	177 - 330	1.1e-18	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	188 - 379	6.2e-48	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006439)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33770 AT1G71530 AT1G71530 AT1G71530 AT1G71530 AT4G10010 AT4G10010
fragaria_vesca	FvH4_5g33160 FvH4_5g33160
malus_domestica	MD08G1214900.v1.1 MD15G1397900.v1.1
prunus_persica	Prupe.1G546300_v2.0.a1 Prupe.1G546300_v2.0.a1
pyrus_communis	pycom15g35760
rosa_chinensis	RchiOBHm_Chr7g0231421
rosa_laevigata	RLG00000001418
rosa_multiflora	Rmu_sc0003396.1_g000031 Rmu_sc0010066.1_g000001
rosa_roxburghii	Rroxscaffold_3G00229330
rosa_rugosa	Rorug07G0266500 Rorug07G0266500
rosa_samantha	Rh7AG420800 Rh7BG395200 Rh7CG440900 Rh7DG413400
rosa_wichuraiana	Rw7G034720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1317
Acc36I	ACCTGC	1 cut(s)	599
Acc65I	GGTACC	1 cut(s)	1675
AccB1I	GGYRCC	3 cut(s)	853, 872, 1675
AccBSI	CCGCTC	1 cut(s)	1238
AccI	GTMKAC	1 cut(s)	480
AciI	CCGC	4 cut(s)	288, 1145, 1238, 1633
AclWI	GGATC	5 cut(s)	603, 1111, 1235, 1248, 1495
AcoI	YGGCCR	1 cut(s)	285
AcsI	RAATTY	1 cut(s)	1130
AcuI	CTGAAG	1 cut(s)	369
AcvI	CACGTG	1 cut(s)	626
AfaI	GTAC	8 cut(s)	45, 531, 910, 1373, 1637, 1641, 1677, 1740
AfiI	CCNNNNNNNGG	6 cut(s)	408, 412, 1212, 1250, 1424, 1685
AflIII	ACRYGT	2 cut(s)	40, 623
AhlI	ACTAGT	1 cut(s)	824
AjnI	CCWGG	4 cut(s)	244, 955, 1335, 1681
AjuI	GAANNNNNNNTTGG	2 cut(s)	399, 431
AloI	GAACNNNNNNTCC	2 cut(s)	1340, 1372
Alw21I	GWGCWC	1 cut(s)	1756
Alw26I	GTCTC	2 cut(s)	1402, 1714
Alw44I	GTGCAC	1 cut(s)	1752
AlwI	GGATC	5 cut(s)	603, 1111, 1235, 1248, 1495
AoxI	GGCC	3 cut(s)	285, 368, 682
ApaLI	GTGCAC	1 cut(s)	1752
ApeKI	GCWGC	6 cut(s)	6, 356, 359, 567, 617, 814
ApoI	RAATTY	1 cut(s)	1130
AseI	ATTAAT	1 cut(s)	747
Asp700I	GAANNNNTTC	2 cut(s)	175, 1279
Asp718I	GGTACC	1 cut(s)	1675
AspS9I	GGNCC	3 cut(s)	887, 1259, 1667
AsuC2I	CCSGG	1 cut(s)	425
AsuHPI	GGTGA	4 cut(s)	155, 785, 999, 1373
AvaII	GGWCC	3 cut(s)	887, 1259, 1667
BaeGI	GKGCMC	2 cut(s)	856, 1756
BamHI	GGATCC	1 cut(s)	1240
BanI	GGYRCC	3 cut(s)	853, 872, 1675
BanII	GRGCYC	1 cut(s)	804
BauI	CACGAG	2 cut(s)	489, 1749
BbrPI	CACGTG	1 cut(s)	626
BbsI	GAAGAC	1 cut(s)	1704
Bbv12I	GWGCWC	1 cut(s)	1756
BbvI	GCAGC	5 cut(s)	346, 368, 579, 629, 826
BccI	CCATC	4 cut(s)	410, 749, 1018, 1171
BciT130I	CCWGG	4 cut(s)	246, 957, 1337, 1683
BciVI	GTATCC	1 cut(s)	929
BcnI	CCSGG	1 cut(s)	425
BcoDI	GTCTC	2 cut(s)	1402, 1714
BcuI	ACTAGT	1 cut(s)	824
BfaI	CTAG	7 cut(s)	210, 315, 446, 545, 605, 825, 1431
BfmI	CTRYAG	2 cut(s)	360, 1149
BfuAI	ACCTGC	1 cut(s)	599
BfuI	GTATCC	1 cut(s)	929
BglI	GCCNNNNNGGC	1 cut(s)	376
BglII	AGATCT	1 cut(s)	898
BisI	GCNGC	7 cut(s)	7, 288, 357, 360, 568, 618, 815
BlsI	GCNGC	7 cut(s)	8, 289, 358, 361, 569, 619, 816
Bme1390I	CCNGG	5 cut(s)	246, 425, 957, 1337, 1683
Bme18I	GGWCC	3 cut(s)	887, 1259, 1667
BmgT120I	GGNCC	3 cut(s)	887, 1259, 1667
BmiI	GGNNCC	7 cut(s)	25, 417, 855, 874, 1242, 1416, 1677
BmrFI	CCNGG	5 cut(s)	246, 425, 957, 1337, 1683
BmsI	GCATC	4 cut(s)	388, 639, 1192, 1279
BpiI	GAAGAC	1 cut(s)	1704
BpmI	CTGGAG	1 cut(s)	1665
Bpu10I	CCTNAGC	1 cut(s)	858
BpuEI	CTTGAG	2 cut(s)	556, 749
BpuMI	CCSGG	1 cut(s)	425
BsaAI	YACGTR	4 cut(s)	43, 626, 1639, 1742
BsaJI	CCNNGG	7 cut(s)	245, 291, 406, 1324, 1336, 1359, 1682
Bsc4I	CCNNNNNNNGG	6 cut(s)	408, 412, 1212, 1250, 1424, 1685
Bse1I	ACTGG	2 cut(s)	508, 1590
Bse3DI	GCAATG	4 cut(s)	208, 315, 1416, 1657
BseBI	CCWGG	4 cut(s)	246, 957, 1337, 1683
BseDI	CCNNGG	7 cut(s)	245, 291, 406, 1324, 1336, 1359, 1682
BseGI	GGATG	6 cut(s)	402, 1159, 1222, 1468, 1606, 1725
BseLI	CCNNNNNNNGG	6 cut(s)	408, 412, 1212, 1250, 1424, 1685
BseMI	GCAATG	4 cut(s)	208, 315, 1416, 1657
BseMII	CTCAG	4 cut(s)	42, 849, 1005, 1658
BseNI	ACTGG	2 cut(s)	508, 1590
BseRI	GAGGAG	2 cut(s)	1067, 1440
BseSI	GKGCMC	2 cut(s)	856, 1756
BseXI	GCAGC	5 cut(s)	346, 368, 579, 629, 826
BsgI	GTGCAG	2 cut(s)	698, 1500
BshFI	GGCC	3 cut(s)	287, 370, 684
BshNI	GGYRCC	3 cut(s)	853, 872, 1675
BsiHKAI	GWGCWC	1 cut(s)	1756
BsiSI	CCGG	3 cut(s)	393, 424, 890
BslI	CCNNNNNNNGG	6 cut(s)	408, 412, 1212, 1250, 1424, 1685
BsmAI	GTCTC	2 cut(s)	1402, 1714
BsmI	GAATGC	1 cut(s)	1635
BsnI	GGCC	3 cut(s)	287, 370, 684
Bsp1286I	GDGCHC	3 cut(s)	804, 856, 1756
Bsp143I	GATC	9 cut(s)	214, 493, 595, 805, 898, 1093, 1103, 1240, 1487
Bsp19I	CCATGG	1 cut(s)	1359
BspACI	CCGC	4 cut(s)	288, 1145, 1238, 1633
BspANI	GGCC	3 cut(s)	287, 370, 684
BspCNI	CTCAG	4 cut(s)	41, 850, 1006, 1657
BspHI	TCATGA	2 cut(s)	217, 598
BspLI	GGNNCC	7 cut(s)	25, 417, 855, 874, 1242, 1416, 1677
BspMAI	CTGCAG	1 cut(s)	364
BspMI	ACCTGC	1 cut(s)	599
BspPI	GGATC	5 cut(s)	603, 1111, 1235, 1248, 1495
BspT107I	GGYRCC	3 cut(s)	853, 872, 1675
BsrBI	CCGCTC	1 cut(s)	1238
BsrDI	GCAATG	4 cut(s)	208, 315, 1416, 1657
BsrI	ACTGG	2 cut(s)	508, 1590
BssECI	CCNNGG	7 cut(s)	245, 291, 406, 1324, 1336, 1359, 1682
BssMI	GATC	9 cut(s)	214, 493, 595, 805, 898, 1093, 1103, 1240, 1487
BssNAI	GTATAC	1 cut(s)	481
BssSI	CACGAG	2 cut(s)	489, 1749
BssT1I	CCWWGG	4 cut(s)	291, 406, 1324, 1359
Bst1107I	GTATAC	1 cut(s)	481
Bst2BI	CACGAG	2 cut(s)	489, 1749
Bst2UI	CCWGG	4 cut(s)	246, 957, 1337, 1683
Bst4CI	ACNGT	3 cut(s)	277, 1611, 1671
BstAPI	GCANNNNNTGC	1 cut(s)	614
BstBAI	YACGTR	4 cut(s)	43, 626, 1639, 1742
BstC8I	GCNNGC	2 cut(s)	329, 1756
BstDEI	CTNAG	8 cut(s)	28, 54, 116, 677, 858, 1014, 1121, 1644
BstDSI	CCRYGG	1 cut(s)	1359
BstENI	CCTNNNNNAGG	1 cut(s)	1248
BstF5I	GGATG	6 cut(s)	402, 1159, 1222, 1468, 1606, 1725
BstKTI	GATC	9 cut(s)	217, 496, 598, 808, 901, 1096, 1106, 1243, 1490
BstMAI	GTCTC	2 cut(s)	1402, 1714
BstMBI	GATC	9 cut(s)	214, 493, 595, 805, 898, 1093, 1103, 1240, 1487
BstNI	CCWGG	4 cut(s)	246, 957, 1337, 1683
BstNSI	RCATGY	3 cut(s)	1049, 1378, 1705
BstSCI	CCNGG	5 cut(s)	244, 423, 955, 1335, 1681
BstSFI	CTRYAG	2 cut(s)	360, 1149
BstSLI	GKGCMC	2 cut(s)	856, 1756
BstSNI	TACGTA	2 cut(s)	1639, 1742
BstV1I	GCAGC	5 cut(s)	346, 368, 579, 629, 826
BstV2I	GAAGAC	1 cut(s)	1704
BstX2I	RGATCY	3 cut(s)	898, 1103, 1240
BstXI	CCANNNNNNTGG	1 cut(s)	1664
BstYI	RGATCY	3 cut(s)	898, 1103, 1240
BstZ17I	GTATAC	1 cut(s)	481
BsuI	GTATCC	1 cut(s)	929
BsuRI	GGCC	3 cut(s)	287, 370, 684
BtgI	CCRYGG	1 cut(s)	1359
BtsCI	GGATG	6 cut(s)	402, 1159, 1222, 1468, 1606, 1725
BtsI	GCAGTG	2 cut(s)	481, 691
BtsIMutI	CAGTG	4 cut(s)	282, 481, 691, 1467
BveI	ACCTGC	1 cut(s)	599
Cac8I	GCNNGC	2 cut(s)	329, 1756
CciI	TCATGA	2 cut(s)	217, 598
Cfr13I	GGNCC	3 cut(s)	887, 1259, 1667
Csp6I	GTAC	8 cut(s)	44, 530, 909, 1372, 1636, 1640, 1676, 1739
CspCI	CAANNNNNGTGG	2 cut(s)	982, 1017
CviAII	CATG	9 cut(s)	218, 564, 599, 952, 1046, 1360, 1375, 1702, 1715
CviQI	GTAC	8 cut(s)	44, 530, 909, 1372, 1636, 1640, 1676, 1739
DdeI	CTNAG	8 cut(s)	28, 54, 116, 677, 858, 1014, 1121, 1644
DpnI	GATC	9 cut(s)	216, 495, 597, 807, 900, 1095, 1105, 1242, 1489
DpnII	GATC	9 cut(s)	214, 493, 595, 805, 898, 1093, 1103, 1240, 1487
EaeI	YGGCCR	1 cut(s)	285
Eco105I	TACGTA	2 cut(s)	1639, 1742
Eco130I	CCWWGG	4 cut(s)	291, 406, 1324, 1359
Eco24I	GRGCYC	1 cut(s)	804
Eco32I	GATATC	1 cut(s)	724
Eco47I	GGWCC	3 cut(s)	887, 1259, 1667
Eco57I	CTGAAG	1 cut(s)	369
Eco72I	CACGTG	1 cut(s)	626
EcoNI	CCTNNNNNAGG	1 cut(s)	1248
EcoRI	GAATTC	1 cut(s)	1130
EcoRII	CCWGG	4 cut(s)	244, 955, 1335, 1681
EcoRV	GATATC	1 cut(s)	724
EcoT14I	CCWWGG	4 cut(s)	291, 406, 1324, 1359
EcoT22I	ATGCAT	1 cut(s)	984
EcoT38I	GRGCYC	1 cut(s)	804
ErhI	CCWWGG	4 cut(s)	291, 406, 1324, 1359
FaeI	CATG	9 cut(s)	221, 567, 602, 955, 1049, 1363, 1378, 1705, 1718
FalI	AAGNNNNNCTT	2 cut(s)	160, 192
FatI	CATG	9 cut(s)	217, 563, 598, 951, 1045, 1359, 1374, 1701, 1714
FblI	GTMKAC	1 cut(s)	480
Fnu4HI	GCNGC	7 cut(s)	7, 288, 357, 360, 568, 618, 815
FokI	GGATG	6 cut(s)	389, 1146, 1229, 1455, 1613, 1712
FriOI	GRGCYC	1 cut(s)	804
Fsp4HI	GCNGC	7 cut(s)	7, 288, 357, 360, 568, 618, 815
FspBI	CTAG	7 cut(s)	210, 315, 446, 545, 605, 825, 1431
GluI	GCNGC	7 cut(s)	7, 288, 357, 360, 568, 618, 815
GsuI	CTGGAG	1 cut(s)	1665
HaeIII	GGCC	3 cut(s)	287, 370, 684
HapII	CCGG	3 cut(s)	393, 424, 890
Hin1II	CATG	9 cut(s)	221, 567, 602, 955, 1049, 1363, 1378, 1705, 1718
HindIII	AAGCTT	1 cut(s)	1208
HinfI	GANTC	5 cut(s)	50, 146, 1265, 1622, 1653
HpaII	CCGG	3 cut(s)	393, 424, 890
HphI	GGTGA	4 cut(s)	155, 785, 999, 1373
Hpy166II	GTNNAC	4 cut(s)	481, 639, 1007, 1754
Hpy188I	TCNGA	7 cut(s)	31, 136, 240, 458, 810, 1015, 1647
Hpy8I	GTNNAC	4 cut(s)	481, 639, 1007, 1754
HpyAV	CCTTC	6 cut(s)	70, 120, 131, 381, 1269, 1591
HpyCH4III	ACNGT	3 cut(s)	277, 1611, 1671
HpyCH4IV	ACGT	4 cut(s)	42, 625, 1638, 1741
HpyF3I	CTNAG	8 cut(s)	28, 54, 116, 677, 858, 1014, 1121, 1644
HpySE526I	ACGT	4 cut(s)	42, 625, 1638, 1741
Hsp92II	CATG	9 cut(s)	221, 567, 602, 955, 1049, 1363, 1378, 1705, 1718
KpnI	GGTACC	1 cut(s)	1679
Kzo9I	GATC	9 cut(s)	214, 493, 595, 805, 898, 1093, 1103, 1240, 1487
LmnI	GCTCC	3 cut(s)	106, 1427, 1540
Lsp1109I	GCAGC	5 cut(s)	346, 368, 579, 629, 826
LweI	GCATC	4 cut(s)	388, 639, 1192, 1279
MaeI	CTAG	7 cut(s)	210, 315, 446, 545, 605, 825, 1431
MaeII	ACGT	4 cut(s)	42, 625, 1638, 1741
MaeIII	GTNAC	3 cut(s)	773, 835, 1364
MalI	GATC	9 cut(s)	216, 495, 597, 807, 900, 1095, 1105, 1242, 1489
MbiI	CCGCTC	1 cut(s)	1238
MboI	GATC	9 cut(s)	214, 493, 595, 805, 898, 1093, 1103, 1240, 1487
MboII	GAAGA	8 cut(s)	233, 535, 1039, 1100, 1103, 1126, 1578, 1709
MfeI	CAATTG	2 cut(s)	92, 671
MflI	RGATCY	3 cut(s)	898, 1103, 1240
MhlI	GDGCHC	3 cut(s)	804, 856, 1756
MluCI	AATT	9 cut(s)	70, 92, 195, 671, 929, 1037, 1130, 1532, 1582
MmeI	TCCRAC	2 cut(s)	128, 1753
Mph1103I	ATGCAT	1 cut(s)	984
MroXI	GAANNNNTTC	2 cut(s)	175, 1279
MseI	TTAA	5 cut(s)	747, 821, 1248, 1535, 1581
MspA1I	CMGCKG	1 cut(s)	359
MspI	CCGG	3 cut(s)	393, 424, 890
MspR9I	CCNGG	5 cut(s)	246, 425, 957, 1337, 1683
MunI	CAATTG	2 cut(s)	92, 671
Mva1269I	GAATGC	1 cut(s)	1635
MvaI	CCWGG	4 cut(s)	246, 957, 1337, 1683
NciI	CCSGG	1 cut(s)	425
NcoI	CCATGG	1 cut(s)	1359
NdeII	GATC	9 cut(s)	214, 493, 595, 805, 898, 1093, 1103, 1240, 1487
NlaIII	CATG	9 cut(s)	221, 567, 602, 955, 1049, 1363, 1378, 1705, 1718
NlaIV	GGNNCC	7 cut(s)	25, 417, 855, 874, 1242, 1416, 1677
NmuCI	GTSAC	2 cut(s)	773, 1364
NsiI	ATGCAT	1 cut(s)	984
NspI	RCATGY	3 cut(s)	1049, 1378, 1705
PagI	TCATGA	2 cut(s)	217, 598
PcsI	WCGNNNNNNNCGW	1 cut(s)	1747
PctI	GAATGC	1 cut(s)	1635
PdmI	GAANNNNTTC	2 cut(s)	175, 1279
PfeI	GAWTC	5 cut(s)	50, 146, 1265, 1622, 1653
PkrI	GCNGC	7 cut(s)	8, 289, 358, 361, 569, 619, 816
PmaCI	CACGTG	1 cut(s)	626
PmlI	CACGTG	1 cut(s)	626
Ppu21I	YACGTR	4 cut(s)	43, 626, 1639, 1742
PshBI	ATTAAT	1 cut(s)	747
PsiI	TTATAA	1 cut(s)	1317
Psp6I	CCWGG	4 cut(s)	244, 955, 1335, 1681
PspCI	CACGTG	1 cut(s)	626
PspGI	CCWGG	4 cut(s)	244, 955, 1335, 1681
PspN4I	GGNNCC	7 cut(s)	25, 417, 855, 874, 1242, 1416, 1677
PspPI	GGNCC	3 cut(s)	887, 1259, 1667
PstI	CTGCAG	1 cut(s)	364
PsuI	RGATCY	3 cut(s)	898, 1103, 1240
PvuII	CAGCTG	1 cut(s)	359
RsaI	GTAC	8 cut(s)	45, 531, 910, 1373, 1637, 1641, 1677, 1740
RsaNI	GTAC	8 cut(s)	44, 530, 909, 1372, 1636, 1640, 1676, 1739
SaqAI	TTAA	5 cut(s)	747, 821, 1248, 1535, 1581
SatI	GCNGC	7 cut(s)	7, 288, 357, 360, 568, 618, 815
Sau3AI	GATC	9 cut(s)	214, 493, 595, 805, 898, 1093, 1103, 1240, 1487
Sau96I	GGNCC	3 cut(s)	887, 1259, 1667
ScrFI	CCNGG	5 cut(s)	246, 425, 957, 1337, 1683
SduI	GDGCHC	3 cut(s)	804, 856, 1756
SfaNI	GCATC	4 cut(s)	388, 639, 1192, 1279
SfcI	CTRYAG	2 cut(s)	360, 1149
SinI	GGWCC	3 cut(s)	887, 1259, 1667
SmlI	CTYRAG	2 cut(s)	535, 764
SmoI	CTYRAG	2 cut(s)	535, 764
SnaBI	TACGTA	2 cut(s)	1639, 1742
SpeI	ACTAGT	1 cut(s)	824
Sse9I	AATT	9 cut(s)	70, 92, 195, 671, 929, 1037, 1130, 1532, 1582
SsiI	CCGC	4 cut(s)	288, 1145, 1238, 1633
SspMI	CTAG	7 cut(s)	210, 315, 446, 545, 605, 825, 1431
StyD4I	CCNGG	5 cut(s)	244, 423, 955, 1335, 1681
StyI	CCWWGG	4 cut(s)	291, 406, 1324, 1359
TaaI	ACNGT	3 cut(s)	277, 1611, 1671
TaiI	ACGT	4 cut(s)	45, 628, 1641, 1744
TaqI	TCGA	6 cut(s)	17, 585, 703, 1068, 1099, 1346
TasI	AATT	9 cut(s)	70, 92, 195, 671, 929, 1037, 1130, 1532, 1582
TatI	WGTACW	2 cut(s)	908, 1371
TauI	GCSGC	1 cut(s)	290
TfiI	GAWTC	5 cut(s)	50, 146, 1265, 1622, 1653
Tru1I	TTAA	5 cut(s)	747, 821, 1248, 1535, 1581
Tru9I	TTAA	5 cut(s)	747, 821, 1248, 1535, 1581
TscAI	CASTG	4 cut(s)	282, 481, 698, 1467
TseFI	GTSAC	2 cut(s)	773, 1364
TseI	GCWGC	6 cut(s)	6, 356, 359, 567, 617, 814
Tsp45I	GTSAC	2 cut(s)	773, 1364
TspDTI	ATGAA	2 cut(s)	138, 234
TspRI	CASTG	4 cut(s)	282, 481, 698, 1467
VneI	GTGCAC	1 cut(s)	1752
VpaK11BI	GGWCC	3 cut(s)	887, 1259, 1667
VspI	ATTAAT	1 cut(s)	747
XagI	CCTNNNNNAGG	1 cut(s)	1248
XapI	RAATTY	1 cut(s)	1130
XbaI	TCTAGA	1 cut(s)	209
XceI	RCATGY	3 cut(s)	1049, 1378, 1705
XmiI	GTMKAC	1 cut(s)	480
XmnI	GAANNNNTTC	2 cut(s)	175, 1279
XspI	CTAG	7 cut(s)	210, 315, 446, 545, 605, 825, 1431
Zsp2I	ATGCAT	1 cut(s)	984

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.