Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0006439

Physical Location & Seq

Genomic Coordinates Reverse (-)

43714327 .. 43718197

Gene Structure 3871 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG395200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1911 bp

ATGGGCTGCATTTGCTCGAAAGGAACCTCAGAACCAGAACACGTACAGGATTCTAAGAGAGTAGAAAGTAATTTGAAGGAGTATTCGGTTCAATTGGTTGCTCCAACTCCTTCACTAAGAGATGACTTTGTATCAGAAGGTGGTGATTCATCAATGCGTTTGTTATCAAGAAATGCTTCCAAAGCAAATGGGAGAATTAGCAATGTGTCTAGAGATCATGAAGATAAATCAAAGGTTCAGAAACATGGGATTGCTAATCATCAAAGAGGGGCAACAGTGGAAATGGCCGCCAAGGAAAAAAAAGTGGCAATGTCTAGGATAGTGAGCTTGCCACTTGGTGAAGAAGCCTCACAAGCAGCTGCAGGGTGGCCTTCGTGGCTAACTTCAGTTGCCGGAGATGCCATCCAAGGGTGGGTTCCTCGCCGGGCAGACACCTTTGAGAAGCTAGACAAAATCGGACAAGGAACTTATAGCAGTGTATACAAGGCTCGTGATCTTGAAACTGGTAAAATAGTTGCATTGAAGAAAGTACGGTTTGTAAATATGGACCCGGAAAGTGTGCGCTTCATGGCTAGAGAAATCTATATTTTACGTAAACTTGACCATCCAAATGTCATGAAGCTTGAGGGTCTAGTCGCTTCAACAATGTCATGCAGCTTATATCTTGTGTTCGAGTATATGGATCATGACCTTGCAGGTCTTGCAGCAACACGTGGCATCAAGTTTACTGAACCACAGATAAAATGTTTAGCGCAACAATTGCTTAGTGGCCTTGAACACTGCCATAGTCGAGGTGTCCTGCACCGAGATATCAAGGGTTCTAATCTTTTGATTAATAATGATGGAGTTCTCAAGATTGGTGACTTCGGTTTGGCAACATTTTATGAGCCCGATCAGAAGCAGCCATTAACTAGTCGTGTTGTAACTCTGTGGTACAGGGCACCTGAGCTTCTGCTTGGTGCCACAGAGTATGGTCCGGCAATAGATCTGTGGAGCACAGGCTGTATCCTTGCAGAATTGTTTGCTGGAAAGCCTATCATGCCTGGTAGAACAGAGGTGGAACAAATGCATAAGATTTTCAAGCTCTGTGGTTCACCATCTGAGGACTTCTGGAAGAAAACAAAATTACCACATGCAACTAGTTTCAAGCCTCAACAACCTTACAAGCGTCGCCTTGCTGAGACCTTCAAAGACTTCCCTTCTACAGCTTTGACTCTTGTCGATAAACTCCTCGCCATAGAAGAAGATCATCGAGGATCTGCTGGTTCAGCCCTTAGAAGTGAATTCTTCACTACACCGCCTGTAGCTTGTCATCCATCAGCTTTACCACACTATCCTCCAAGCAAGGAGTTTGATGCCAAGCTTCGGGATGAGGAAAAAAGGCAAAGAGCGGATCCTATTAAAGGGCGTGGTCCTGAATCTGTTAGAAGGGCTTCAAGAGATGCCAAGATAGCACCAACACCAGATTATGCCCAAGGAAATATCCAGGGAAAGTCGAACCCGAAATCCATGGGTCACAAGTACATGCCTCACCAGCAGGATAGTGTCTCTGGCTTTGCAATGGAACCACACAGAGGAGCTAGGCAGAATGGTTATTCTCAATGTAGTTCAGTGATACATCCTCGTAGTGCAGTAGGATCATCATTGAATAAGACGACAGCTTCTACAAAACATAAGCCAGAATTGAGGGAGCTGAAATCTCACAAGCCTCTAACTGCAACAGACTTGTTTAATTCTTCCAGTCGGAAGGATGACAGACTGTTTTTCAAAGAATCTGGAATGCGGTACGTACCTCAGAGCAGAATCCATTGCTCTGGACCGTTGGTACCTCCAGGGGGAAACATTGAAGACATGCTCAAAGAGCATGAGAGACACATCCAACAGGCAGTACGTAAAGCTCGTGCACGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051726 GO:0065007 GO:0071704 GO:0071944 GO:0097472 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

636

Amino Acids

70.74

Weight (kDa)

9.39

Isoelectric Point (pI)

50.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	146 - 430	1.2e-66	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	149 - 359	1.2e-30	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006439)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33770 AT1G71530 AT1G71530 AT1G71530 AT1G71530 AT4G10010 AT4G10010
fragaria_vesca	FvH4_5g33160 FvH4_5g33160
malus_domestica	MD08G1214900.v1.1 MD15G1397900.v1.1
prunus_persica	Prupe.1G546300_v2.0.a1 Prupe.1G546300_v2.0.a1
pyrus_communis	pycom15g35760
rosa_chinensis	RchiOBHm_Chr7g0231421
rosa_laevigata	RLG00000001418
rosa_multiflora	Rmu_sc0003396.1_g000031 Rmu_sc0010066.1_g000001
rosa_roxburghii	Rroxscaffold_3G00229330
rosa_rugosa	Rorug07G0266500 Rorug07G0266500
rosa_samantha	Rh7AG420800 Rh7BG395200 Rh7CG440900 Rh7DG413400
rosa_wichuraiana	Rw7G034720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	686
Acc65I	GGTACC	1 cut(s)	1825
AccB1I	GGYRCC	3 cut(s)	940, 959, 1825
AccBSI	CCGCTC	1 cut(s)	1391
AccI	GTMKAC	1 cut(s)	480
AciI	CCGC	4 cut(s)	288, 1298, 1391, 1783
AclWI	GGATC	5 cut(s)	690, 1264, 1388, 1401, 1645
AcoI	YGGCCR	1 cut(s)	285
AcsI	RAATTY	1 cut(s)	1283
AcuI	CTGAAG	1 cut(s)	369
AcvI	CACGTG	1 cut(s)	713
AdeI	CACNNNGTG	1 cut(s)	338
AfaI	GTAC	8 cut(s)	45, 531, 935, 1523, 1787, 1791, 1827, 1890
AfiI	CCNNNNNNNGG	6 cut(s)	408, 412, 1365, 1403, 1574, 1835
AflIII	ACRYGT	2 cut(s)	40, 710
AhlI	ACTAGT	2 cut(s)	911, 1139
AjnI	CCWGG	3 cut(s)	1042, 1485, 1831
AjuI	GAANNNNNNNTTGG	2 cut(s)	399, 431
AloI	GAACNNNNNNTCC	2 cut(s)	1490, 1522
Alw21I	GWGCWC	2 cut(s)	998, 1906
Alw26I	GTCTC	3 cut(s)	1175, 1552, 1864
Alw44I	GTGCAC	1 cut(s)	1902
AlwI	GGATC	5 cut(s)	690, 1264, 1388, 1401, 1645
AoxI	GGCC	3 cut(s)	285, 368, 769
ApaLI	GTGCAC	1 cut(s)	1902
ApeKI	GCWGC	6 cut(s)	6, 356, 359, 654, 704, 901
ApoI	RAATTY	1 cut(s)	1283
AseI	ATTAAT	1 cut(s)	834
Asp700I	GAANNNNTTC	2 cut(s)	175, 1432
Asp718I	GGTACC	1 cut(s)	1825
AspLEI	GCGC	2 cut(s)	564, 754
AspS9I	GGNCC	4 cut(s)	547, 974, 1412, 1817
AsuC2I	CCSGG	2 cut(s)	425, 551
AsuHPI	GGTGA	5 cut(s)	155, 350, 872, 1086, 1523
AvaII	GGWCC	4 cut(s)	547, 974, 1412, 1817
BaeGI	GKGCMC	2 cut(s)	943, 1906
BamHI	GGATCC	1 cut(s)	1393
BanI	GGYRCC	3 cut(s)	940, 959, 1825
BanII	GRGCYC	1 cut(s)	891
BauI	CACGAG	2 cut(s)	489, 1899
BbrPI	CACGTG	1 cut(s)	713
BbsI	GAAGAC	1 cut(s)	1854
Bbv12I	GWGCWC	2 cut(s)	998, 1906
BbvI	GCAGC	5 cut(s)	346, 368, 666, 716, 913
BccI	CCATC	5 cut(s)	410, 612, 836, 1105, 1324
BciT130I	CCWGG	3 cut(s)	1044, 1487, 1833
BciVI	GTATCC	1 cut(s)	1016
BcnI	CCSGG	2 cut(s)	425, 551
BcoDI	GTCTC	3 cut(s)	1175, 1552, 1864
BcuI	ACTAGT	2 cut(s)	911, 1139
BfaI	CTAG	8 cut(s)	210, 315, 446, 573, 632, 912, 1140, 1581
BfmI	CTRYAG	3 cut(s)	360, 1203, 1302
BfuAI	ACCTGC	1 cut(s)	686
BfuI	GTATCC	1 cut(s)	1016
BglI	GCCNNNNNGGC	1 cut(s)	376
BglII	AGATCT	1 cut(s)	985
BisI	GCNGC	7 cut(s)	7, 288, 357, 360, 655, 705, 902
BlsI	GCNGC	7 cut(s)	8, 289, 358, 361, 656, 706, 903
Bme1390I	CCNGG	5 cut(s)	425, 551, 1044, 1487, 1833
Bme18I	GGWCC	4 cut(s)	547, 974, 1412, 1817
BmgT120I	GGNCC	4 cut(s)	547, 974, 1412, 1817
BmiI	GGNNCC	8 cut(s)	25, 417, 549, 942, 961, 1395, 1566, 1827
BmrFI	CCNGG	5 cut(s)	425, 551, 1044, 1487, 1833
BmsI	GCATC	4 cut(s)	388, 726, 1345, 1432
BoxI	GACNNNNGTC	1 cut(s)	1217
BpiI	GAAGAC	1 cut(s)	1854
BpmI	CTGGAG	1 cut(s)	1815
Bpu10I	CCTNAGC	1 cut(s)	945
BpuEI	CTTGAG	2 cut(s)	644, 836
BpuMI	CCSGG	2 cut(s)	425, 551
BsaAI	YACGTR	5 cut(s)	43, 593, 713, 1789, 1892
BsaI	GGTCTC	1 cut(s)	1175
BsaJI	CCNNGG	6 cut(s)	291, 406, 1474, 1486, 1509, 1832
Bsc4I	CCNNNNNNNGG	6 cut(s)	408, 412, 1365, 1403, 1574, 1835
Bse1I	ACTGG	2 cut(s)	508, 1740
Bse3DI	GCAATG	4 cut(s)	208, 315, 1566, 1807
BseBI	CCWGG	3 cut(s)	1044, 1487, 1833
BseDI	CCNNGG	6 cut(s)	291, 406, 1474, 1486, 1509, 1832
BseGI	GGATG	7 cut(s)	402, 604, 1312, 1375, 1618, 1756, 1875
BseLI	CCNNNNNNNGG	6 cut(s)	408, 412, 1365, 1403, 1574, 1835
BseMI	GCAATG	4 cut(s)	208, 315, 1566, 1807
BseMII	CTCAG	5 cut(s)	42, 936, 1092, 1170, 1808
BseNI	ACTGG	2 cut(s)	508, 1740
BseRI	GAGGAG	2 cut(s)	1220, 1590
BseSI	GKGCMC	2 cut(s)	943, 1906
BseXI	GCAGC	5 cut(s)	346, 368, 666, 716, 913
BsgI	GTGCAG	2 cut(s)	785, 1650
BshFI	GGCC	3 cut(s)	287, 370, 771
BshNI	GGYRCC	3 cut(s)	940, 959, 1825
BsiHKAI	GWGCWC	2 cut(s)	998, 1906
BsiSI	CCGG	4 cut(s)	393, 424, 551, 977
BslI	CCNNNNNNNGG	6 cut(s)	408, 412, 1365, 1403, 1574, 1835
BsmAI	GTCTC	3 cut(s)	1175, 1552, 1864
BsmI	GAATGC	1 cut(s)	1785
BsnI	GGCC	3 cut(s)	287, 370, 771
Bso31I	GGTCTC	1 cut(s)	1175
Bsp1286I	GDGCHC	4 cut(s)	891, 943, 998, 1906
Bsp143I	GATC	9 cut(s)	214, 493, 682, 892, 985, 1246, 1256, 1393, 1637
Bsp19I	CCATGG	1 cut(s)	1509
BspACI	CCGC	4 cut(s)	288, 1298, 1391, 1783
BspANI	GGCC	3 cut(s)	287, 370, 771
BspCNI	CTCAG	5 cut(s)	41, 937, 1093, 1171, 1807
BspHI	TCATGA	3 cut(s)	217, 615, 685
BspLI	GGNNCC	8 cut(s)	25, 417, 549, 942, 961, 1395, 1566, 1827
BspMAI	CTGCAG	1 cut(s)	364
BspMI	ACCTGC	1 cut(s)	686
BspPI	GGATC	5 cut(s)	690, 1264, 1388, 1401, 1645
BspT107I	GGYRCC	3 cut(s)	940, 959, 1825
BspTNI	GGTCTC	1 cut(s)	1175
BsrBI	CCGCTC	1 cut(s)	1391
BsrDI	GCAATG	4 cut(s)	208, 315, 1566, 1807
BsrI	ACTGG	2 cut(s)	508, 1740
BssECI	CCNNGG	6 cut(s)	291, 406, 1474, 1486, 1509, 1832
BssMI	GATC	9 cut(s)	214, 493, 682, 892, 985, 1246, 1256, 1393, 1637
BssNAI	GTATAC	1 cut(s)	481
BssSI	CACGAG	2 cut(s)	489, 1899
BssT1I	CCWWGG	4 cut(s)	291, 406, 1474, 1509
Bst1107I	GTATAC	1 cut(s)	481
Bst2BI	CACGAG	2 cut(s)	489, 1899
Bst2UI	CCWGG	3 cut(s)	1044, 1487, 1833
Bst4CI	ACNGT	4 cut(s)	277, 534, 1761, 1821
BstAPI	GCANNNNNTGC	2 cut(s)	701, 760
BstBAI	YACGTR	5 cut(s)	43, 593, 713, 1789, 1892
BstC8I	GCNNGC	2 cut(s)	329, 1906
BstDEI	CTNAG	9 cut(s)	28, 54, 116, 764, 945, 1101, 1179, 1274, 1794
BstDSI	CCRYGG	1 cut(s)	1509
BstENI	CCTNNNNNAGG	1 cut(s)	1401
BstF5I	GGATG	7 cut(s)	402, 604, 1312, 1375, 1618, 1756, 1875
BstHHI	GCGC	2 cut(s)	564, 754
BstKTI	GATC	9 cut(s)	217, 496, 685, 895, 988, 1249, 1259, 1396, 1640
BstMAI	GTCTC	3 cut(s)	1175, 1552, 1864
BstMBI	GATC	9 cut(s)	214, 493, 682, 892, 985, 1246, 1256, 1393, 1637
BstNI	CCWGG	3 cut(s)	1044, 1487, 1833
BstNSI	RCATGY	3 cut(s)	1136, 1528, 1855
BstPAI	GACNNNNGTC	1 cut(s)	1217
BstSCI	CCNGG	5 cut(s)	423, 549, 1042, 1485, 1831
BstSFI	CTRYAG	3 cut(s)	360, 1203, 1302
BstSLI	GKGCMC	2 cut(s)	943, 1906
BstSNI	TACGTA	3 cut(s)	593, 1789, 1892
BstV1I	GCAGC	5 cut(s)	346, 368, 666, 716, 913
BstV2I	GAAGAC	1 cut(s)	1854
BstX2I	RGATCY	3 cut(s)	985, 1256, 1393
BstXI	CCANNNNNNTGG	1 cut(s)	1814
BstYI	RGATCY	3 cut(s)	985, 1256, 1393
BstZ17I	GTATAC	1 cut(s)	481
BsuI	GTATCC	1 cut(s)	1016
BsuRI	GGCC	3 cut(s)	287, 370, 771
BtgI	CCRYGG	1 cut(s)	1509
BtsCI	GGATG	7 cut(s)	402, 604, 1312, 1375, 1618, 1756, 1875
BtsI	GCAGTG	2 cut(s)	481, 778
BtsIMutI	CAGTG	4 cut(s)	282, 481, 778, 1617
BveI	ACCTGC	1 cut(s)	686
Cac8I	GCNNGC	2 cut(s)	329, 1906
CciI	TCATGA	3 cut(s)	217, 615, 685
CfoI	GCGC	2 cut(s)	564, 754
Cfr13I	GGNCC	4 cut(s)	547, 974, 1412, 1817
CseI	GACGC	1 cut(s)	1157
Csp6I	GTAC	8 cut(s)	44, 530, 934, 1522, 1786, 1790, 1826, 1889
CspCI	CAANNNNNGTGG	2 cut(s)	1069, 1104
CviQI	GTAC	8 cut(s)	44, 530, 934, 1522, 1786, 1790, 1826, 1889
DdeI	CTNAG	9 cut(s)	28, 54, 116, 764, 945, 1101, 1179, 1274, 1794
DpnI	GATC	9 cut(s)	216, 495, 684, 894, 987, 1248, 1258, 1395, 1639
DpnII	GATC	9 cut(s)	214, 493, 682, 892, 985, 1246, 1256, 1393, 1637
DraIII	CACNNNGTG	1 cut(s)	338
EaeI	YGGCCR	1 cut(s)	285
Eco105I	TACGTA	3 cut(s)	593, 1789, 1892
Eco130I	CCWWGG	4 cut(s)	291, 406, 1474, 1509
Eco24I	GRGCYC	1 cut(s)	891
Eco31I	GGTCTC	1 cut(s)	1175
Eco32I	GATATC	1 cut(s)	811
Eco47I	GGWCC	4 cut(s)	547, 974, 1412, 1817
Eco57I	CTGAAG	1 cut(s)	369
Eco72I	CACGTG	1 cut(s)	713
EcoNI	CCTNNNNNAGG	1 cut(s)	1401
EcoRI	GAATTC	1 cut(s)	1283
EcoRII	CCWGG	3 cut(s)	1042, 1485, 1831
EcoRV	GATATC	1 cut(s)	811
EcoT14I	CCWWGG	4 cut(s)	291, 406, 1474, 1509
EcoT22I	ATGCAT	1 cut(s)	1071
EcoT38I	GRGCYC	1 cut(s)	891
ErhI	CCWWGG	4 cut(s)	291, 406, 1474, 1509
FalI	AAGNNNNNCTT	2 cut(s)	160, 192
FblI	GTMKAC	1 cut(s)	480
Fnu4HI	GCNGC	7 cut(s)	7, 288, 357, 360, 655, 705, 902
FokI	GGATG	7 cut(s)	389, 591, 1299, 1382, 1605, 1763, 1862
FriOI	GRGCYC	1 cut(s)	891
Fsp4HI	GCNGC	7 cut(s)	7, 288, 357, 360, 655, 705, 902
FspBI	CTAG	8 cut(s)	210, 315, 446, 573, 632, 912, 1140, 1581
GlaI	GCGC	2 cut(s)	563, 753
GluI	GCNGC	7 cut(s)	7, 288, 357, 360, 655, 705, 902
GsuI	CTGGAG	1 cut(s)	1815
HaeIII	GGCC	3 cut(s)	287, 370, 771
HapII	CCGG	4 cut(s)	393, 424, 551, 977
HgaI	GACGC	1 cut(s)	1157
HhaI	GCGC	2 cut(s)	564, 754
Hin6I	GCGC	2 cut(s)	562, 752
HinP1I	GCGC	2 cut(s)	562, 752
HindIII	AAGCTT	2 cut(s)	620, 1361
HinfI	GANTC	6 cut(s)	50, 146, 1213, 1418, 1772, 1803
HpaII	CCGG	4 cut(s)	393, 424, 551, 977
HphI	GGTGA	5 cut(s)	155, 350, 872, 1086, 1523
Hpy166II	GTNNAC	5 cut(s)	481, 596, 726, 1094, 1904
Hpy188I	TCNGA	8 cut(s)	31, 136, 240, 458, 897, 1102, 1746, 1797
Hpy8I	GTNNAC	5 cut(s)	481, 596, 726, 1094, 1904
Hpy99I	CGWCG	1 cut(s)	1173
HpyAV	CCTTC	8 cut(s)	70, 120, 131, 381, 1195, 1209, 1422, 1741
HpyCH4III	ACNGT	4 cut(s)	277, 534, 1761, 1821
HpyCH4IV	ACGT	5 cut(s)	42, 592, 712, 1788, 1891
HpyF3I	CTNAG	9 cut(s)	28, 54, 116, 764, 945, 1101, 1179, 1274, 1794
HpySE526I	ACGT	5 cut(s)	42, 592, 712, 1788, 1891
HspAI	GCGC	2 cut(s)	562, 752
KpnI	GGTACC	1 cut(s)	1829
Kzo9I	GATC	9 cut(s)	214, 493, 682, 892, 985, 1246, 1256, 1393, 1637
LmnI	GCTCC	4 cut(s)	106, 993, 1577, 1690
Lsp1109I	GCAGC	5 cut(s)	346, 368, 666, 716, 913
LweI	GCATC	4 cut(s)	388, 726, 1345, 1432
MaeI	CTAG	8 cut(s)	210, 315, 446, 573, 632, 912, 1140, 1581
MaeII	ACGT	5 cut(s)	42, 592, 712, 1788, 1891
MaeIII	GTNAC	3 cut(s)	860, 922, 1514
MalI	GATC	9 cut(s)	216, 495, 684, 894, 987, 1248, 1258, 1395, 1639
MbiI	CCGCTC	1 cut(s)	1391
MboI	GATC	9 cut(s)	214, 493, 682, 892, 985, 1246, 1256, 1393, 1637
MboII	GAAGA	9 cut(s)	233, 353, 535, 1126, 1253, 1256, 1279, 1728, 1859
MfeI	CAATTG	2 cut(s)	92, 758
MflI	RGATCY	3 cut(s)	985, 1256, 1393
MhlI	GDGCHC	4 cut(s)	891, 943, 998, 1906
MluCI	AATT	9 cut(s)	70, 92, 195, 758, 1016, 1124, 1283, 1682, 1732
MlyI	GAGTC	1 cut(s)	1207
MmeI	TCCRAC	3 cut(s)	128, 1724, 1903
Mph1103I	ATGCAT	1 cut(s)	1071
MroXI	GAANNNNTTC	2 cut(s)	175, 1432
MseI	TTAA	4 cut(s)	834, 908, 1401, 1731
MslI	CAYNNNNRTG	1 cut(s)	609
MspA1I	CMGCKG	1 cut(s)	359
MspI	CCGG	4 cut(s)	393, 424, 551, 977
MspR9I	CCNGG	5 cut(s)	425, 551, 1044, 1487, 1833
MunI	CAATTG	2 cut(s)	92, 758
Mva1269I	GAATGC	1 cut(s)	1785
MvaI	CCWGG	3 cut(s)	1044, 1487, 1833
NciI	CCSGG	2 cut(s)	425, 551
NcoI	CCATGG	1 cut(s)	1509
NdeII	GATC	9 cut(s)	214, 493, 682, 892, 985, 1246, 1256, 1393, 1637
NlaIV	GGNNCC	8 cut(s)	25, 417, 549, 942, 961, 1395, 1566, 1827
NmuCI	GTSAC	2 cut(s)	860, 1514
NsiI	ATGCAT	1 cut(s)	1071
NspI	RCATGY	3 cut(s)	1136, 1528, 1855
PagI	TCATGA	3 cut(s)	217, 615, 685
PcsI	WCGNNNNNNNCGW	1 cut(s)	1897
PctI	GAATGC	1 cut(s)	1785
PdmI	GAANNNNTTC	2 cut(s)	175, 1432
PfeI	GAWTC	5 cut(s)	50, 146, 1418, 1772, 1803
PkrI	GCNGC	7 cut(s)	8, 289, 358, 361, 656, 706, 903
PleI	GAGTC	1 cut(s)	1207
PmaCI	CACGTG	1 cut(s)	713
PmlI	CACGTG	1 cut(s)	713
PpsI	GAGTC	1 cut(s)	1207
Ppu21I	YACGTR	5 cut(s)	43, 593, 713, 1789, 1892
PshAI	GACNNNNGTC	1 cut(s)	1217
PshBI	ATTAAT	1 cut(s)	834
Psp6I	CCWGG	3 cut(s)	1042, 1485, 1831
PspCI	CACGTG	1 cut(s)	713
PspGI	CCWGG	3 cut(s)	1042, 1485, 1831
PspN4I	GGNNCC	8 cut(s)	25, 417, 549, 942, 961, 1395, 1566, 1827
PspPI	GGNCC	4 cut(s)	547, 974, 1412, 1817
PstI	CTGCAG	1 cut(s)	364
PsuI	RGATCY	3 cut(s)	985, 1256, 1393
PvuII	CAGCTG	1 cut(s)	359
RsaI	GTAC	8 cut(s)	45, 531, 935, 1523, 1787, 1791, 1827, 1890
RsaNI	GTAC	8 cut(s)	44, 530, 934, 1522, 1786, 1790, 1826, 1889
RseI	CAYNNNNRTG	1 cut(s)	609
SaqAI	TTAA	4 cut(s)	834, 908, 1401, 1731
SatI	GCNGC	7 cut(s)	7, 288, 357, 360, 655, 705, 902
Sau3AI	GATC	9 cut(s)	214, 493, 682, 892, 985, 1246, 1256, 1393, 1637
Sau96I	GGNCC	4 cut(s)	547, 974, 1412, 1817
SchI	GAGTC	1 cut(s)	1207
ScrFI	CCNGG	5 cut(s)	425, 551, 1044, 1487, 1833
SduI	GDGCHC	4 cut(s)	891, 943, 998, 1906
SfaNI	GCATC	4 cut(s)	388, 726, 1345, 1432
SfcI	CTRYAG	3 cut(s)	360, 1203, 1302
SinI	GGWCC	4 cut(s)	547, 974, 1412, 1817
SmiMI	CAYNNNNRTG	1 cut(s)	609
SmlI	CTYRAG	2 cut(s)	623, 851
SmoI	CTYRAG	2 cut(s)	623, 851
SnaBI	TACGTA	3 cut(s)	593, 1789, 1892
SpeI	ACTAGT	2 cut(s)	911, 1139
Sse9I	AATT	9 cut(s)	70, 92, 195, 758, 1016, 1124, 1283, 1682, 1732
SsiI	CCGC	4 cut(s)	288, 1298, 1391, 1783
SspMI	CTAG	8 cut(s)	210, 315, 446, 573, 632, 912, 1140, 1581
StyD4I	CCNGG	5 cut(s)	423, 549, 1042, 1485, 1831
StyI	CCWWGG	4 cut(s)	291, 406, 1474, 1509
TaaI	ACNGT	4 cut(s)	277, 534, 1761, 1821
TaiI	ACGT	5 cut(s)	45, 595, 715, 1791, 1894
TaqI	TCGA	6 cut(s)	17, 672, 790, 1221, 1252, 1496
TasI	AATT	9 cut(s)	70, 92, 195, 758, 1016, 1124, 1283, 1682, 1732
TatI	WGTACW	1 cut(s)	1521
TauI	GCSGC	1 cut(s)	290
TfiI	GAWTC	5 cut(s)	50, 146, 1418, 1772, 1803
Tru1I	TTAA	4 cut(s)	834, 908, 1401, 1731
Tru9I	TTAA	4 cut(s)	834, 908, 1401, 1731
TscAI	CASTG	4 cut(s)	282, 481, 785, 1617
TseFI	GTSAC	2 cut(s)	860, 1514
TseI	GCWGC	6 cut(s)	6, 356, 359, 654, 704, 901
Tsp45I	GTSAC	2 cut(s)	860, 1514
TspDTI	ATGAA	4 cut(s)	138, 234, 556, 632
TspRI	CASTG	4 cut(s)	282, 481, 785, 1617
VneI	GTGCAC	1 cut(s)	1902
VpaK11BI	GGWCC	4 cut(s)	547, 974, 1412, 1817
VspI	ATTAAT	1 cut(s)	834
XagI	CCTNNNNNAGG	1 cut(s)	1401
XapI	RAATTY	1 cut(s)	1283
XbaI	TCTAGA	1 cut(s)	209
XceI	RCATGY	3 cut(s)	1136, 1528, 1855
XmiI	GTMKAC	1 cut(s)	480
XmnI	GAANNNNTTC	2 cut(s)	175, 1432
XspI	CTAG	8 cut(s)	210, 315, 446, 573, 632, 912, 1140, 1581
Zsp2I	ATGCAT	1 cut(s)	1071

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.