Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0006439

Physical Location & Seq

Genomic Coordinates Forward (+)

15365484 .. 15369354

Gene Structure 3871 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000001418

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1989 bp

ATGGGCTGCATTTGCTCGAAAGGAACCTCAGAACCAGAACACGTACAGGATTCTAAGAGAGTAGAAAGTAATTTGAAGGAGTATTCGGTTCAATTGGTTGCTCCAACTCCTTCACTAAGAGATGACTTTGTATCAGAAGGTGGTGATTCATCAATGCGTTTGTTATCAAGAAACGCTTCCAAAGCAAATGGGAGAATTAGCAATGTGTCTAGAGATCATGAAGATAAATCAAAGGTTCAGAAACCTGGGATTGCTAGTCATCAAAGAGGGGCAACAGTGGAAATGGCCGCCAAGGAAAAAAAAGTGGCAATGTCTAGGATAGTGAGCTTGCCACTTGGTGAAGAAGCCTCACAAGCAGCTGCAGGGTGGCCTTCGTGGCTAACTTCAGTTGCTGGAGATGCCATCCAAGGGTGGGTTCCTCGGCGGGCAGACACCTTTGAGAAGCTAGACAAAATCGGACAAGGAACTTATAGCAGTGTATACAAGGCTCGTGATCTTGAAACTGGTAAAATAGTTGCATTGAAGAAAGTACGGTTTGTAAATATGGACCCGGAAAGTGTGCGCTTCATGGCTAGAGAAATCTATATTTTACGTAAACTTGACCATCCAAATGTCATGAAGCTTGAGGGTCTAGTCGCTTCAACAATGTCATGCAGCTTATATCTTGTGTTCGAGTATATGGATCATGACCTTGCAGGTCTTGCAGCAACACGTGGCATCAAGTTTACTGAACCACAGATAAAATGTTTAGCTCAACAATTGCTTAGTGGCCTTGAACACTGCCATAGTCGAGGTGTCCTGCACCGAGATATCAAGGGTTCTAATCTTTTGATTAATAATGATGGAGTTCTCAAGATTGGTGACTTCGGTTTGGCAACATTTTATGAGCCCGATCAGAAGCAGCCATTAACCAGTCGTGTTGTAACTCTGTGGTATAGGGCACCTGAGCTTCTCCTTGGTGCCACAGAGTATGGTCCGGCAATAGATCTGTGGAGCACAGGCTGTATCCTTGCAGAATTGTTTGCTGGAAAGCCTATCATGCCTGGTAGAACAGAGGTGGAACAAATGCATAAGATTTTCAAGCTCTGTGGTTCACCATCTGAGGACTTCTGGAAGAAAACAAAATTACCACATGCAACTAGTTTCAAGCCTCAACAACCTTACAAGCGTCGCCTTGCTGAGACCTTCAAAGACTTCCCTTCTACAGCTTTGGCTCTTGTCGATAAACTCCTCGCCATAGAAGAAGATCATCGAGGATCTGCTGGTTCAGCCCTTAGAAGTGAATTCTTCACTACACCGCCTGTAGCTTGTCATCCATCAGCTTTACCACACTATCCTCCAAGCAAGGAGTTCGATGCCAAGATTCGGGATGAGGAAAAAAGGCAAAGAGCGGATCCTATTAAAGGGCGTGGTCCTGAATCTGTTAGAAGGGCTTCAAGAGATGCCAAGATAGCACCAACACCAGATTATAATGCCCAAGGAAATATCCAGCAGGGAAAGTCGAACCCGAAATCCATGGGTCACAAGTACATGCCTCACCAGCAGGATAGTGTCTCTGGCTTTGCAATGGAACCACACAGAGGAGCTAGGCAGAATGGTTATTCTCAATGTAGTTCAGTGATACATCCTAGTAGTGCAGTAGGATCATCATTGAATAAGACGACAGCTTCTACAAAACATAAGCCAGAATTGAGGGAGCTGAAATCTCACAAGCCTCTAACTGCAACAGACTTGTTTAATTCTTCCAGTAGGAAGGATGACAGACTGTTTTTCAAAGAATCTGGAATGGTGAGAAATTCATTTTCTCAAGCGGTTAACGTTTTAAAGCTTTCTTTTGATTTAAGAGAAACACCAAAACTTAGGTACGTACCTCAGAGCAGAATCCATTGCTCTGGACCGTTGGTACCTCCAGGGGGAAACATTGAAGACATGCTCAAAGAGCATGAGAGACACATCCAACAGGCAGTACGTAAAGCTCGTGCACGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051726 GO:0065007 GO:0071704 GO:0071944 GO:0097472 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

663

Amino Acids

73.56

Weight (kDa)

9.41

Isoelectric Point (pI)

49.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	146 - 430	1.4e-66	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	149 - 359	1.3e-30	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006439)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33770 AT1G71530 AT1G71530 AT1G71530 AT1G71530 AT4G10010 AT4G10010
fragaria_vesca	FvH4_5g33160 FvH4_5g33160
malus_domestica	MD08G1214900.v1.1 MD15G1397900.v1.1
prunus_persica	Prupe.1G546300_v2.0.a1 Prupe.1G546300_v2.0.a1
pyrus_communis	pycom15g35760
rosa_chinensis	RchiOBHm_Chr7g0231421
rosa_laevigata	RLG00000001418
rosa_multiflora	Rmu_sc0003396.1_g000031 Rmu_sc0010066.1_g000001
rosa_roxburghii	Rroxscaffold_3G00229330
rosa_rugosa	Rorug07G0266500 Rorug07G0266500
rosa_samantha	Rh7AG420800 Rh7BG395200 Rh7CG440900 Rh7DG413400
rosa_wichuraiana	Rw7G034720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1470
Acc36I	ACCTGC	1 cut(s)	686
Acc65I	GGTACC	1 cut(s)	1903
AccB1I	GGYRCC	3 cut(s)	940, 959, 1903
AccBSI	CCGCTC	1 cut(s)	1391
AccI	GTMKAC	1 cut(s)	480
AciI	CCGC	5 cut(s)	288, 424, 1298, 1391, 1811
AclI	AACGTT	1 cut(s)	1818
AclWI	GGATC	5 cut(s)	690, 1264, 1388, 1401, 1651
AcoI	YGGCCR	1 cut(s)	285
AcsI	RAATTY	2 cut(s)	1283, 1795
AcuI	CTGAAG	1 cut(s)	369
AcvI	CACGTG	1 cut(s)	713
AdeI	CACNNNGTG	1 cut(s)	338
AfaI	GTAC	7 cut(s)	45, 531, 1529, 1865, 1869, 1905, 1968
AfiI	CCNNNNNNNGG	6 cut(s)	408, 412, 1365, 1403, 1580, 1913
AflIII	ACRYGT	2 cut(s)	40, 710
AhlI	ACTAGT	1 cut(s)	1139
AjnI	CCWGG	3 cut(s)	244, 1042, 1909
AjuI	GAANNNNNNNTTGG	2 cut(s)	399, 431
AloI	GAACNNNNNNTCC	2 cut(s)	1496, 1528
Alw21I	GWGCWC	2 cut(s)	998, 1984
Alw26I	GTCTC	3 cut(s)	1175, 1558, 1942
Alw44I	GTGCAC	1 cut(s)	1980
AlwI	GGATC	5 cut(s)	690, 1264, 1388, 1401, 1651
AlwNI	CAGNNNCTG	1 cut(s)	392
AoxI	GGCC	3 cut(s)	285, 368, 769
ApaLI	GTGCAC	1 cut(s)	1980
ApeKI	GCWGC	6 cut(s)	6, 356, 359, 654, 704, 901
ApoI	RAATTY	2 cut(s)	1283, 1795
AseI	ATTAAT	1 cut(s)	834
Asp700I	GAANNNNTTC	2 cut(s)	175, 1432
Asp718I	GGTACC	1 cut(s)	1903
AspLEI	GCGC	1 cut(s)	564
AspS9I	GGNCC	4 cut(s)	547, 974, 1412, 1895
AsuC2I	CCSGG	1 cut(s)	551
AsuHPI	GGTGA	6 cut(s)	155, 350, 872, 1086, 1529, 1801
AvaII	GGWCC	4 cut(s)	547, 974, 1412, 1895
BaeGI	GKGCMC	2 cut(s)	943, 1984
BamHI	GGATCC	1 cut(s)	1393
BanI	GGYRCC	3 cut(s)	940, 959, 1903
BanII	GRGCYC	1 cut(s)	891
BauI	CACGAG	2 cut(s)	489, 1977
BbrPI	CACGTG	1 cut(s)	713
BbsI	GAAGAC	1 cut(s)	1932
Bbv12I	GWGCWC	2 cut(s)	998, 1984
BbvI	GCAGC	5 cut(s)	346, 368, 666, 716, 913
BccI	CCATC	5 cut(s)	410, 612, 836, 1105, 1324
BcgI	CGANNNNNNTGC	2 cut(s)	1333, 1367
BciT130I	CCWGG	3 cut(s)	246, 1044, 1911
BciVI	GTATCC	1 cut(s)	1016
BcnI	CCSGG	1 cut(s)	551
BcoDI	GTCTC	3 cut(s)	1175, 1558, 1942
BcuI	ACTAGT	1 cut(s)	1139
BfaI	CTAG	9 cut(s)	210, 255, 315, 446, 573, 632, 1140, 1587, 1629
BfmI	CTRYAG	3 cut(s)	360, 1203, 1302
BfuAI	ACCTGC	1 cut(s)	686
BfuI	GTATCC	1 cut(s)	1016
BglI	GCCNNNNNGGC	1 cut(s)	376
BglII	AGATCT	1 cut(s)	985
BisI	GCNGC	7 cut(s)	7, 288, 357, 360, 655, 705, 902
BlsI	GCNGC	7 cut(s)	8, 289, 358, 361, 656, 706, 903
Bme1390I	CCNGG	4 cut(s)	246, 551, 1044, 1911
Bme18I	GGWCC	4 cut(s)	547, 974, 1412, 1895
BmgT120I	GGNCC	4 cut(s)	547, 974, 1412, 1895
BmiI	GGNNCC	8 cut(s)	25, 417, 549, 942, 961, 1395, 1572, 1905
BmrFI	CCNGG	4 cut(s)	246, 551, 1044, 1911
BmsI	GCATC	4 cut(s)	388, 726, 1345, 1432
BpiI	GAAGAC	1 cut(s)	1932
BpmI	CTGGAG	2 cut(s)	414, 1893
Bpu10I	CCTNAGC	1 cut(s)	945
BpuEI	CTTGAG	3 cut(s)	644, 836, 1791
BpuMI	CCSGG	1 cut(s)	551
BsaAI	YACGTR	5 cut(s)	43, 593, 713, 1867, 1970
BsaI	GGTCTC	1 cut(s)	1175
BsaJI	CCNNGG	8 cut(s)	245, 291, 406, 419, 955, 1477, 1515, 1910
Bsc4I	CCNNNNNNNGG	6 cut(s)	408, 412, 1365, 1403, 1580, 1913
Bse1I	ACTGG	3 cut(s)	508, 912, 1746
Bse3DI	GCAATG	4 cut(s)	208, 315, 1572, 1885
BseBI	CCWGG	3 cut(s)	246, 1044, 1911
BseDI	CCNNGG	8 cut(s)	245, 291, 406, 419, 955, 1477, 1515, 1910
BseGI	GGATG	7 cut(s)	402, 604, 1312, 1375, 1624, 1762, 1953
BseLI	CCNNNNNNNGG	6 cut(s)	408, 412, 1365, 1403, 1580, 1913
BseMI	GCAATG	4 cut(s)	208, 315, 1572, 1885
BseMII	CTCAG	5 cut(s)	42, 936, 1092, 1170, 1886
BseNI	ACTGG	3 cut(s)	508, 912, 1746
BseRI	GAGGAG	2 cut(s)	1220, 1596
BseSI	GKGCMC	2 cut(s)	943, 1984
BseXI	GCAGC	5 cut(s)	346, 368, 666, 716, 913
BsgI	GTGCAG	2 cut(s)	785, 1656
BshFI	GGCC	3 cut(s)	287, 370, 771
BshNI	GGYRCC	3 cut(s)	940, 959, 1903
BsiHKAI	GWGCWC	2 cut(s)	998, 1984
BsiSI	CCGG	2 cut(s)	551, 977
BslI	CCNNNNNNNGG	6 cut(s)	408, 412, 1365, 1403, 1580, 1913
BsmAI	GTCTC	3 cut(s)	1175, 1558, 1942
BsnI	GGCC	3 cut(s)	287, 370, 771
Bso31I	GGTCTC	1 cut(s)	1175
Bsp1286I	GDGCHC	4 cut(s)	891, 943, 998, 1984
Bsp143I	GATC	9 cut(s)	214, 493, 682, 892, 985, 1246, 1256, 1393, 1643
Bsp19I	CCATGG	1 cut(s)	1515
BspACI	CCGC	5 cut(s)	288, 424, 1298, 1391, 1811
BspANI	GGCC	3 cut(s)	287, 370, 771
BspCNI	CTCAG	5 cut(s)	41, 937, 1093, 1171, 1885
BspHI	TCATGA	3 cut(s)	217, 615, 685
BspLI	GGNNCC	8 cut(s)	25, 417, 549, 942, 961, 1395, 1572, 1905
BspMAI	CTGCAG	1 cut(s)	364
BspMI	ACCTGC	1 cut(s)	686
BspPI	GGATC	5 cut(s)	690, 1264, 1388, 1401, 1651
BspT107I	GGYRCC	3 cut(s)	940, 959, 1903
BspTNI	GGTCTC	1 cut(s)	1175
BsrBI	CCGCTC	1 cut(s)	1391
BsrDI	GCAATG	4 cut(s)	208, 315, 1572, 1885
BsrI	ACTGG	3 cut(s)	508, 912, 1746
BssECI	CCNNGG	8 cut(s)	245, 291, 406, 419, 955, 1477, 1515, 1910
BssMI	GATC	9 cut(s)	214, 493, 682, 892, 985, 1246, 1256, 1393, 1643
BssNAI	GTATAC	1 cut(s)	481
BssSI	CACGAG	2 cut(s)	489, 1977
BssT1I	CCWWGG	5 cut(s)	291, 406, 955, 1477, 1515
Bst1107I	GTATAC	1 cut(s)	481
Bst2BI	CACGAG	2 cut(s)	489, 1977
Bst2UI	CCWGG	3 cut(s)	246, 1044, 1911
Bst4CI	ACNGT	4 cut(s)	277, 534, 1767, 1899
BstAPI	GCANNNNNTGC	1 cut(s)	701
BstBAI	YACGTR	5 cut(s)	43, 593, 713, 1867, 1970
BstC8I	GCNNGC	3 cut(s)	329, 426, 1984
BstDSI	CCRYGG	1 cut(s)	1515
BstENI	CCTNNNNNAGG	1 cut(s)	1401
BstF5I	GGATG	7 cut(s)	402, 604, 1312, 1375, 1624, 1762, 1953
BstHHI	GCGC	1 cut(s)	564
BstKTI	GATC	9 cut(s)	217, 496, 685, 895, 988, 1249, 1259, 1396, 1646
BstMAI	GTCTC	3 cut(s)	1175, 1558, 1942
BstMBI	GATC	9 cut(s)	214, 493, 682, 892, 985, 1246, 1256, 1393, 1643
BstNI	CCWGG	3 cut(s)	246, 1044, 1911
BstNSI	RCATGY	3 cut(s)	1136, 1534, 1933
BstSCI	CCNGG	4 cut(s)	244, 549, 1042, 1909
BstSFI	CTRYAG	3 cut(s)	360, 1203, 1302
BstSLI	GKGCMC	2 cut(s)	943, 1984
BstSNI	TACGTA	3 cut(s)	593, 1867, 1970
BstV1I	GCAGC	5 cut(s)	346, 368, 666, 716, 913
BstV2I	GAAGAC	1 cut(s)	1932
BstX2I	RGATCY	3 cut(s)	985, 1256, 1393
BstXI	CCANNNNNNTGG	1 cut(s)	1892
BstYI	RGATCY	3 cut(s)	985, 1256, 1393
BstZ17I	GTATAC	1 cut(s)	481
BsuI	GTATCC	1 cut(s)	1016
BsuRI	GGCC	3 cut(s)	287, 370, 771
BtgI	CCRYGG	1 cut(s)	1515
BtsCI	GGATG	7 cut(s)	402, 604, 1312, 1375, 1624, 1762, 1953
BtsI	GCAGTG	2 cut(s)	481, 778
BtsIMutI	CAGTG	4 cut(s)	282, 481, 778, 1623
BveI	ACCTGC	1 cut(s)	686
Cac8I	GCNNGC	3 cut(s)	329, 426, 1984
CaiI	CAGNNNCTG	1 cut(s)	392
CciI	TCATGA	3 cut(s)	217, 615, 685
CfoI	GCGC	1 cut(s)	564
Cfr13I	GGNCC	4 cut(s)	547, 974, 1412, 1895
CseI	GACGC	1 cut(s)	1157
Csp6I	GTAC	7 cut(s)	44, 530, 1528, 1864, 1868, 1904, 1967
CspCI	CAANNNNNGTGG	2 cut(s)	1069, 1104
CviQI	GTAC	7 cut(s)	44, 530, 1528, 1864, 1868, 1904, 1967
DpnI	GATC	9 cut(s)	216, 495, 684, 894, 987, 1248, 1258, 1395, 1645
DpnII	GATC	9 cut(s)	214, 493, 682, 892, 985, 1246, 1256, 1393, 1643
DraI	TTTAAA	1 cut(s)	1824
DraIII	CACNNNGTG	1 cut(s)	338
EaeI	YGGCCR	1 cut(s)	285
Eco105I	TACGTA	3 cut(s)	593, 1867, 1970
Eco130I	CCWWGG	5 cut(s)	291, 406, 955, 1477, 1515
Eco24I	GRGCYC	1 cut(s)	891
Eco31I	GGTCTC	1 cut(s)	1175
Eco32I	GATATC	1 cut(s)	811
Eco47I	GGWCC	4 cut(s)	547, 974, 1412, 1895
Eco57I	CTGAAG	1 cut(s)	369
Eco72I	CACGTG	1 cut(s)	713
EcoNI	CCTNNNNNAGG	1 cut(s)	1401
EcoRI	GAATTC	1 cut(s)	1283
EcoRII	CCWGG	3 cut(s)	244, 1042, 1909
EcoRV	GATATC	1 cut(s)	811
EcoT14I	CCWWGG	5 cut(s)	291, 406, 955, 1477, 1515
EcoT22I	ATGCAT	1 cut(s)	1071
EcoT38I	GRGCYC	1 cut(s)	891
ErhI	CCWWGG	5 cut(s)	291, 406, 955, 1477, 1515
FalI	AAGNNNNNCTT	2 cut(s)	160, 192
FauI	CCCGC	1 cut(s)	417
FblI	GTMKAC	1 cut(s)	480
Fnu4HI	GCNGC	7 cut(s)	7, 288, 357, 360, 655, 705, 902
FokI	GGATG	7 cut(s)	389, 591, 1299, 1382, 1611, 1769, 1940
FriOI	GRGCYC	1 cut(s)	891
Fsp4HI	GCNGC	7 cut(s)	7, 288, 357, 360, 655, 705, 902
FspBI	CTAG	9 cut(s)	210, 255, 315, 446, 573, 632, 1140, 1587, 1629
GlaI	GCGC	1 cut(s)	563
GluI	GCNGC	7 cut(s)	7, 288, 357, 360, 655, 705, 902
GsuI	CTGGAG	2 cut(s)	414, 1893
HaeIII	GGCC	3 cut(s)	287, 370, 771
HapII	CCGG	2 cut(s)	551, 977
HgaI	GACGC	1 cut(s)	1157
HhaI	GCGC	1 cut(s)	564
Hin6I	GCGC	1 cut(s)	562
HinP1I	GCGC	1 cut(s)	562
HincII	GTYRAC	1 cut(s)	1816
HindII	GTYRAC	1 cut(s)	1816
HindIII	AAGCTT	2 cut(s)	620, 1826
HinfI	GANTC	6 cut(s)	50, 146, 1363, 1418, 1778, 1881
HpaI	GTTAAC	1 cut(s)	1816
HpaII	CCGG	2 cut(s)	551, 977
HphI	GGTGA	6 cut(s)	155, 350, 872, 1086, 1529, 1801
Hpy166II	GTNNAC	6 cut(s)	481, 596, 726, 1094, 1816, 1982
Hpy188I	TCNGA	7 cut(s)	31, 136, 240, 458, 897, 1102, 1875
Hpy8I	GTNNAC	6 cut(s)	481, 596, 726, 1094, 1816, 1982
Hpy99I	CGWCG	1 cut(s)	1173
HpyAV	CCTTC	8 cut(s)	70, 120, 131, 381, 1195, 1209, 1422, 1747
HpyCH4III	ACNGT	4 cut(s)	277, 534, 1767, 1899
HpyCH4IV	ACGT	6 cut(s)	42, 592, 712, 1818, 1866, 1969
HpySE526I	ACGT	6 cut(s)	42, 592, 712, 1818, 1866, 1969
HspAI	GCGC	1 cut(s)	562
KpnI	GGTACC	1 cut(s)	1907
KspAI	GTTAAC	1 cut(s)	1816
Kzo9I	GATC	9 cut(s)	214, 493, 682, 892, 985, 1246, 1256, 1393, 1643
LmnI	GCTCC	4 cut(s)	106, 993, 1583, 1696
Lsp1109I	GCAGC	5 cut(s)	346, 368, 666, 716, 913
LweI	GCATC	4 cut(s)	388, 726, 1345, 1432
MaeI	CTAG	9 cut(s)	210, 255, 315, 446, 573, 632, 1140, 1587, 1629
MaeII	ACGT	6 cut(s)	42, 592, 712, 1818, 1866, 1969
MaeIII	GTNAC	3 cut(s)	860, 922, 1520
MalI	GATC	9 cut(s)	216, 495, 684, 894, 987, 1248, 1258, 1395, 1645
MbiI	CCGCTC	1 cut(s)	1391
MboI	GATC	9 cut(s)	214, 493, 682, 892, 985, 1246, 1256, 1393, 1643
MboII	GAAGA	9 cut(s)	233, 353, 535, 1126, 1253, 1256, 1279, 1734, 1937
MfeI	CAATTG	2 cut(s)	92, 758
MflI	RGATCY	3 cut(s)	985, 1256, 1393
MhlI	GDGCHC	4 cut(s)	891, 943, 998, 1984
MmeI	TCCRAC	2 cut(s)	128, 1981
Mph1103I	ATGCAT	1 cut(s)	1071
MroXI	GAANNNNTTC	2 cut(s)	175, 1432
MseI	TTAA	7 cut(s)	834, 908, 1401, 1737, 1815, 1823, 1841
MslI	CAYNNNNRTG	1 cut(s)	609
MspA1I	CMGCKG	1 cut(s)	359
MspI	CCGG	2 cut(s)	551, 977
MspR9I	CCNGG	4 cut(s)	246, 551, 1044, 1911
MunI	CAATTG	2 cut(s)	92, 758
MvaI	CCWGG	3 cut(s)	246, 1044, 1911
NciI	CCSGG	1 cut(s)	551
NcoI	CCATGG	1 cut(s)	1515
NdeII	GATC	9 cut(s)	214, 493, 682, 892, 985, 1246, 1256, 1393, 1643
NlaIV	GGNNCC	8 cut(s)	25, 417, 549, 942, 961, 1395, 1572, 1905
NmeAIII	GCCGAG	1 cut(s)	400
NmuCI	GTSAC	2 cut(s)	860, 1520
NsiI	ATGCAT	1 cut(s)	1071
NspI	RCATGY	3 cut(s)	1136, 1534, 1933
PagI	TCATGA	3 cut(s)	217, 615, 685
PcsI	WCGNNNNNNNCGW	1 cut(s)	1975
PdmI	GAANNNNTTC	2 cut(s)	175, 1432
PfeI	GAWTC	6 cut(s)	50, 146, 1363, 1418, 1778, 1881
PkrI	GCNGC	7 cut(s)	8, 289, 358, 361, 656, 706, 903
PmaCI	CACGTG	1 cut(s)	713
PmlI	CACGTG	1 cut(s)	713
Ppu21I	YACGTR	5 cut(s)	43, 593, 713, 1867, 1970
PshBI	ATTAAT	1 cut(s)	834
PsiI	TTATAA	1 cut(s)	1470
Psp1406I	AACGTT	1 cut(s)	1818
Psp6I	CCWGG	3 cut(s)	244, 1042, 1909
PspCI	CACGTG	1 cut(s)	713
PspGI	CCWGG	3 cut(s)	244, 1042, 1909
PspN4I	GGNNCC	8 cut(s)	25, 417, 549, 942, 961, 1395, 1572, 1905
PspPI	GGNCC	4 cut(s)	547, 974, 1412, 1895
PstI	CTGCAG	1 cut(s)	364
PstNI	CAGNNNCTG	1 cut(s)	392
PsuI	RGATCY	3 cut(s)	985, 1256, 1393
PvuII	CAGCTG	1 cut(s)	359
RsaI	GTAC	7 cut(s)	45, 531, 1529, 1865, 1869, 1905, 1968
RsaNI	GTAC	7 cut(s)	44, 530, 1528, 1864, 1868, 1904, 1967
RseI	CAYNNNNRTG	1 cut(s)	609
SaqAI	TTAA	7 cut(s)	834, 908, 1401, 1737, 1815, 1823, 1841
SatI	GCNGC	7 cut(s)	7, 288, 357, 360, 655, 705, 902
Sau3AI	GATC	9 cut(s)	214, 493, 682, 892, 985, 1246, 1256, 1393, 1643
Sau96I	GGNCC	4 cut(s)	547, 974, 1412, 1895
ScrFI	CCNGG	4 cut(s)	246, 551, 1044, 1911
SduI	GDGCHC	4 cut(s)	891, 943, 998, 1984
SfaNI	GCATC	4 cut(s)	388, 726, 1345, 1432
SfcI	CTRYAG	3 cut(s)	360, 1203, 1302
SinI	GGWCC	4 cut(s)	547, 974, 1412, 1895
SmiMI	CAYNNNNRTG	1 cut(s)	609
SmlI	CTYRAG	3 cut(s)	623, 851, 1806
SmoI	CTYRAG	3 cut(s)	623, 851, 1806
SnaBI	TACGTA	3 cut(s)	593, 1867, 1970
SpeI	ACTAGT	1 cut(s)	1139
SsiI	CCGC	5 cut(s)	288, 424, 1298, 1391, 1811
SspMI	CTAG	9 cut(s)	210, 255, 315, 446, 573, 632, 1140, 1587, 1629
StyD4I	CCNGG	4 cut(s)	244, 549, 1042, 1909
StyI	CCWWGG	5 cut(s)	291, 406, 955, 1477, 1515
TaaI	ACNGT	4 cut(s)	277, 534, 1767, 1899
TaiI	ACGT	6 cut(s)	45, 595, 715, 1821, 1869, 1972
TaqI	TCGA	7 cut(s)	17, 672, 790, 1221, 1252, 1353, 1502
TatI	WGTACW	1 cut(s)	1527
TauI	GCSGC	1 cut(s)	290
TfiI	GAWTC	6 cut(s)	50, 146, 1363, 1418, 1778, 1881
Tru1I	TTAA	7 cut(s)	834, 908, 1401, 1737, 1815, 1823, 1841
Tru9I	TTAA	7 cut(s)	834, 908, 1401, 1737, 1815, 1823, 1841
TscAI	CASTG	4 cut(s)	282, 481, 785, 1623
TseFI	GTSAC	2 cut(s)	860, 1520
TseI	GCWGC	6 cut(s)	6, 356, 359, 654, 704, 901
Tsp45I	GTSAC	2 cut(s)	860, 1520
TspDTI	ATGAA	5 cut(s)	138, 234, 556, 632, 1788
TspRI	CASTG	4 cut(s)	282, 481, 785, 1623
VneI	GTGCAC	1 cut(s)	1980
VpaK11BI	GGWCC	4 cut(s)	547, 974, 1412, 1895
VspI	ATTAAT	1 cut(s)	834
XagI	CCTNNNNNAGG	1 cut(s)	1401
XapI	RAATTY	2 cut(s)	1283, 1795
XbaI	TCTAGA	1 cut(s)	209
XceI	RCATGY	3 cut(s)	1136, 1534, 1933
XmiI	GTMKAC	1 cut(s)	480
XmnI	GAANNNNTTC	2 cut(s)	175, 1432
XspI	CTAG	9 cut(s)	210, 255, 315, 446, 573, 632, 1140, 1587, 1629
Zsp2I	ATGCAT	1 cut(s)	1071

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.