Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0010363

Physical Location & Seq

Genomic Coordinates Reverse (-)

1670079 .. 1674372

Gene Structure 4294 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1022800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2580 bp

ATGTTGGCCTCGGCAGCCCAACCGCCGTTAACGGTGAAGCAGCCTCATCTCCTCCAATCCTCACTCTCCATCTCAAACACCCTTATCCACATGGAAGTCATTGCAGCTAAACCCACCAGACCCAGAAACAGAAGGCCGAGACTCTTCTTCCCTTCAACCCGTTTCCAATGCCTCAACCTCAAATCACGATCTTCCCGCCAATTCCTCACAAGGGTCAGTGATAGCGACGGCGGCGGTGCGGCAGATGCCACCCCACAACAGTTTAAACCATCCACTGACACTAAAGAGATAAAGAGTACTTCTCTGGGTGATGGGTATGTCGGTTTGTTTATTCGGATGCTCGGGCTGGATAATGATTCCCTTGATAGAGAGCAGGCAATAGTGGCACTCTGGAAATACTCACTTGGAGGAAAGAAGTATGTCGAAGCCATTATGCAGTTTCCTGGCTGCATAAACCTCATTGTAAACTTGCTGAGGTCAGAGTCTAGTTCTGCGTGTGAAGCTGCTGCCGGCCTTTTAAGGTCGATATCCCTTGTTAATTTGTATAGAGATGTGGTAGCACAGAGTGGAGCAATTGAAGAGATAACCGGGTTGCTAAATCGACCGTCTTTGGAACCTGAGGTGAAGGAACAAGCTATATGTACTTTGTGGAACTTGTCTGTGGATGAGAAGTTCAGAGGGAAAATTGCAAACGGTGATGTCTTGCCGTTACTTGTTAAGTCCGTGGATGATGAGGACGTAAAGGTGAAGGAAGCAGCCGGAGGGGTGTTGGCAAATTTATCATTAAGTCACTTTAGTCACAGCATTATGGTTGAAGCAGGTGTTATACCAAAATTGGCAAAGCTCTTAAGAACTGACGTTGAAGGATCAAAAGTAATTAGAAAGGAGGCAAGAAATGCTTTGTTAGAACTATGTAAGGATGAGTACTATAGAATTCTTGTTGTGGAGGAAGGTCTGGTTCCCGTCCCCATCATTGGTTCAGCTGCTTATAAGTCCTTCAGGCCGGGTTTGTATTCATGGCCTAGTTTACCAGATGGTATGGAGATTGAACAGACTTATAAAACTCCCTCCAGGTTTGGTGCTTCTGAATTACTCCTTGGGTTACATGTTGATGAAAAAAACGCAAATATAGAGGAAGCCAAGATGAATGCGATTGTTGGACGGACACAGCAACAGTTTCTTGCTCGTATTGGGGCCATTGAACTGGAAGATGATAAAAAACAGTCTGAATTAACCACCGGTAAACAACTCACACTTTTGCCGTGGACAGATGGTGTGGCTAGATTGGTTTTGATTCTTGGACTTGAAGACGAGTCTGCAATAGCAAGGGCTGCGGAGGCAATTGCTGATGCATCTATCAATGAACATATACGGATAGCATTCAGAGAAGCTGGGGCAGTTAACCTTTTAGTACAGCTTCTAGACAGTAAGAATAATGCCATCGTACTGGCGGCAGTTCGAGCACTAGAGAGGTTGTCTGTCAGTAATGTTGTTTGCCAGTTAATTGAAGATGAAGGTGTTAGGGATCCTTTGGTTAATCTTTTAAAGCAGCCACAGATGTCTGACATCTTGATGGAAAAGGCGTTGGATATTCTTGCCCGGATCTCAGATCCTAATAAAGAAATGAAGTCAAAGTTTTATGATGGACGAAATGGATCAAAAAAGGGATCGGATGCAGCTAGGGGTCCTTATGGTTCCGCGGAAATAACTGGAGATATAGCTAATATGTCCATGTCAAAAACTAATACCAGCAAAAATGTGCTTGACTCTGGGGTTATTGCTCGCCTTGTTGAGACATTAAAGACCCCAACCCCGAGTTTGCAAACAAAAGCTACTTCTATCCTTGATTTCTACGCAGTTATTGACCCAAGCATGGACACCATCATTTCAGCGGATATTGAATCTGGTTTAGATGTTGTTTTCCAGCAAAAGATTCTTGAAGACACGGAATCAGAAGTATATAATCAACAGCCAGAAAAATACGCCCTTGAAGTTGAAGAAGCTGGTCATGCTATATCAGCAGCATCCCGGTTATTTACAAAACTGCTCGACTCTAAGAAGTTCTGCCAAAAAATAGATTCCGCGCATTTCACCAAATTGCTCAGTGATATCCTGAAGTCTAATATCCCCCTTCACAACAAAGATTGGGTTGCTGCTTGTTTGGTGAAACTTGGTTCTCTTTCTGGTCCCAGACTAGATTTCGAGGACCCAATCAACATGGAAGTAACTCTCCACGAGACCATTCCGAGACTCATGGAGCAGTTAAATACCTCATTCTTTCTAGAAGAAAAGGAAGCTGCAGTTGTGGAACTCAACAGAATAATCTCTGAAGGGGTGGTTGATTCCACTCGAGCCATTGCTTCCCAAGGAGGTATATTTCCTTTGGTCGAACTGATTGAACAAGGGAGTGAGAGGGCCGTTGAAGCATGCTTGGCGATACTTTATAATCTGAGCATGGACAGTGAGAACCATTCGGCAATTATAGCTGCTGGAGCAGTTCCCGTTTTGAAGAGAATTGTCCTATCACAAAGACCACAGTGGAATCGGGCACTTCATTTGCTGAGGACTCTACCTACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm KAP

Protein Analysis

860

Amino Acids

94.14

Weight (kDa)

5.54

Isoelectric Point (pI)

44.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ARM_ARMC5	PF24768	149 - 317	2.3e-09	ARMC5
ARM_ARMC5	PF24768	425 - 536	1.4e-07	ARMC5

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010363)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G23180 AT1G23180
fragaria_vesca	FvH4_4g34070
malus_domestica	MD16G1022800.v1.1
prunus_persica	Prupe.1G330100_v2.0.a1 Prupe.1G330100_v2.0.a1 Prupe.1G330100_v2.0.a1 Prupe.1G330100_v2.0.a1
pyrus_communis	pycom16g02010
rosa_chinensis	RchiOBHm_Chr4g0443581
rosa_laevigata	RLG00000005913
rosa_multiflora	Rmu_sc0001118.1_g000017 Rmu_sc0026347.1_g000006
rosa_roxburghii	Rroxscaffold_5G00384130
rosa_samantha	Rh4AG403200 Rh4AG405100 Rh4BG416100 Rh4CG430600 Rh4DG410500 Rh4DG411700
rosa_wichuraiana	Rw4G034780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	990, 1059, 2445
AarI	CACCTGC	1 cut(s)	809
Acc36I	ACCTGC	1 cut(s)	809
AccII	CGCG	2 cut(s)	1700, 2084
AclWI	GGATC	7 cut(s)	874, 1520, 1533, 1604, 1610, 1663, 1675
AcsI	RAATTY	2 cut(s)	775, 933
AcuI	CTGAAG	3 cut(s)	982, 2135, 2349
AdeI	CACNNNGTG	1 cut(s)	566
AfaI	GTAC	5 cut(s)	298, 643, 926, 1413, 1446
AfiI	CCNNNNNNNGG	3 cut(s)	211, 974, 1873
AflII	CTTAAG	1 cut(s)	847
AflIII	ACRYGT	1 cut(s)	1105
AgeI	ACCGGT	1 cut(s)	1238
AjnI	CCWGG	2 cut(s)	442, 1070
AjuI	GAANNNNNNNTTGG	2 cut(s)	1080, 1112
AloI	GAACNNNNNNTCC	2 cut(s)	656, 688
Alw21I	GWGCWC	1 cut(s)	1465
Alw26I	GTCTC	4 cut(s)	133, 1787, 2231, 2242
AlwI	GGATC	7 cut(s)	874, 1520, 1533, 1604, 1610, 1663, 1675
Ama87I	CYCGRG	3 cut(s)	341, 1813, 2349
AoxI	GGCC	7 cut(s)	6, 134, 511, 1001, 1019, 1194, 2415
ApoI	RAATTY	2 cut(s)	775, 933
AsiGI	ACCGGT	1 cut(s)	1238
AspLEI	GCGC	1 cut(s)	2086
AspS9I	GGNCC	5 cut(s)	1194, 1685, 2186, 2206, 2415
AsuC2I	CCSGG	4 cut(s)	589, 1005, 1600, 2029
AsuHPI	GGTGA	7 cut(s)	46, 320, 634, 707, 757, 2083, 2176
AvaI	CYCGRG	3 cut(s)	341, 1813, 2349
AvaII	GGWCC	3 cut(s)	1685, 2186, 2206
AxyI	CCTNAGG	1 cut(s)	618
BaeGI	GKGCMC	1 cut(s)	2551
BamHI	GGATCC	1 cut(s)	1525
BauI	CACGAG	1 cut(s)	2234
BbsI	GAAGAC	2 cut(s)	1314, 1947
Bbv12I	GWGCWC	1 cut(s)	1465
BbvCI	CCTCAGC	2 cut(s)	473, 2561
BceAI	ACGGC	5 cut(s)	10, 244, 691, 1246, 2402
BciT130I	CCWGG	2 cut(s)	444, 1072
BcnI	CCSGG	4 cut(s)	589, 1005, 1600, 2029
BcoDI	GTCTC	4 cut(s)	133, 1787, 2231, 2242
BfaI	CTAG	8 cut(s)	486, 1023, 1281, 1421, 1466, 1680, 2195, 2282
BfmI	CTRYAG	2 cut(s)	928, 2298
BfrI	CTTAAG	1 cut(s)	847
BfuAI	ACCTGC	1 cut(s)	809
BmcAI	AGTACT	2 cut(s)	298, 926
Bme1390I	CCNGG	6 cut(s)	444, 589, 1005, 1072, 1600, 2029
Bme18I	GGWCC	3 cut(s)	1685, 2186, 2206
BmeT110I	CYCGRG	3 cut(s)	341, 1813, 2349
BmgT120I	GGNCC	5 cut(s)	1194, 1685, 2186, 2206, 2415
BmiI	GGNNCC	8 cut(s)	615, 960, 1195, 1527, 1686, 1696, 2188, 2208
BmrFI	CCNGG	6 cut(s)	444, 589, 1005, 1072, 1600, 2029
BmsI	GCATC	6 cut(s)	235, 327, 1339, 1361, 1663, 2033
BpiI	GAAGAC	2 cut(s)	1314, 1947
BplI	GAGNNNNNCTC	2 cut(s)	286, 318
BpmI	CTGGAG	3 cut(s)	1054, 1731, 2511
Bpu10I	CCTNAGC	2 cut(s)	473, 2561
BpuMI	CCSGG	4 cut(s)	589, 1005, 1600, 2029
BsaI	GGTCTC	1 cut(s)	2231
BsaJI	CCNNGG	6 cut(s)	9, 723, 1096, 1262, 1698, 2365
BsaWI	WCCGGW	1 cut(s)	1238
Bsc4I	CCNNNNNNNGG	3 cut(s)	211, 974, 1873
Bse118I	RCCGGY	2 cut(s)	509, 1238
Bse1I	ACTGG	4 cut(s)	1209, 1452, 1498, 1714
Bse21I	CCTNAGG	1 cut(s)	618
Bse3DI	GCAATG	2 cut(s)	99, 2355
BseBI	CCWGG	2 cut(s)	444, 1072
BseDI	CCNNGG	6 cut(s)	9, 723, 1096, 1262, 1698, 2365
BseGI	GGATG	7 cut(s)	269, 342, 670, 733, 925, 1678, 2024
BseLI	CCNNNNNNNGG	3 cut(s)	211, 974, 1873
BseMI	GCAATG	2 cut(s)	99, 2355
BseMII	CTCAG	6 cut(s)	464, 609, 1620, 2116, 2441, 2552
BseNI	ACTGG	4 cut(s)	1209, 1452, 1498, 1714
BseRI	GAGGAG	1 cut(s)	41
BseSI	GKGCMC	1 cut(s)	2551
BseYI	CCCAGC	1 cut(s)	1391
Bsh1236I	CGCG	2 cut(s)	1700, 2084
Bsh1285I	CGRYCG	1 cut(s)	605
BshFI	GGCC	7 cut(s)	8, 136, 513, 1003, 1021, 1196, 2417
BshTI	ACCGGT	1 cut(s)	1238
BsiEI	CGRYCG	1 cut(s)	605
BsiHKAI	GWGCWC	1 cut(s)	1465
BsiHKCI	CYCGRG	3 cut(s)	341, 1813, 2349
BsiSI	CCGG	7 cut(s)	510, 588, 759, 1004, 1239, 1600, 2029
BslFI	GGGAC	2 cut(s)	950, 2172
BslI	CCNNNNNNNGG	3 cut(s)	211, 974, 1873
BsmAI	GTCTC	4 cut(s)	133, 1787, 2231, 2242
BsmFI	GGGAC	2 cut(s)	950, 2172
BsmI	GAATGC	2 cut(s)	1153, 1379
BsnI	GGCC	7 cut(s)	8, 136, 513, 1003, 1021, 1196, 2417
Bso31I	GGTCTC	1 cut(s)	2231
BsoBI	CYCGRG	3 cut(s)	341, 1813, 2349
Bsp1286I	GDGCHC	2 cut(s)	1465, 2551
Bsp143I	GATC	7 cut(s)	188, 866, 1525, 1602, 1609, 1655, 1667
BspANI	GGCC	7 cut(s)	8, 136, 513, 1003, 1021, 1196, 2417
BspCNI	CTCAG	6 cut(s)	465, 610, 1619, 2115, 2442, 2553
BspFNI	CGCG	2 cut(s)	1700, 2084
BspLI	GGNNCC	8 cut(s)	615, 960, 1195, 1527, 1686, 1696, 2188, 2208
BspMAI	CTGCAG	1 cut(s)	2302
BspMI	ACCTGC	1 cut(s)	809
BspPI	GGATC	7 cut(s)	874, 1520, 1533, 1604, 1610, 1663, 1675
BspTI	CTTAAG	1 cut(s)	847
BspTNI	GGTCTC	1 cut(s)	2231
BsrDI	GCAATG	2 cut(s)	99, 2355
BsrFI	RCCGGY	2 cut(s)	509, 1238
BsrI	ACTGG	4 cut(s)	1209, 1452, 1498, 1714
BssAI	RCCGGY	2 cut(s)	509, 1238
BssECI	CCNNGG	6 cut(s)	9, 723, 1096, 1262, 1698, 2365
BssMI	GATC	7 cut(s)	188, 866, 1525, 1602, 1609, 1655, 1667
BssSI	CACGAG	1 cut(s)	2234
BssT1I	CCWWGG	2 cut(s)	1096, 2365
Bst2BI	CACGAG	1 cut(s)	2234
Bst2UI	CCWGG	2 cut(s)	444, 1072
Bst4CI	ACNGT	9 cut(s)	34, 261, 606, 695, 1176, 1224, 1427, 2462, 2538
Bst6I	CTCTTC	3 cut(s)	149, 573, 2504
BstAFI	CTTAAG	1 cut(s)	847
BstAPI	GCANNNNNTGC	2 cut(s)	896, 1331
BstC8I	GCNNGC	4 cut(s)	375, 511, 1783, 2428
BstDEI	CTNAG	7 cut(s)	473, 618, 1606, 2055, 2102, 2450, 2561
BstDSI	CCRYGG	3 cut(s)	723, 1262, 1698
BstF5I	GGATG	7 cut(s)	269, 342, 670, 733, 925, 1678, 2024
BstFNI	CGCG	2 cut(s)	1700, 2084
BstHHI	GCGC	1 cut(s)	2086
BstKTI	GATC	7 cut(s)	191, 869, 1528, 1605, 1612, 1658, 1670
BstMAI	GTCTC	4 cut(s)	133, 1787, 2231, 2242
BstMBI	GATC	7 cut(s)	188, 866, 1525, 1602, 1609, 1655, 1667
BstMCI	CGRYCG	1 cut(s)	605
BstNI	CCWGG	2 cut(s)	444, 1072
BstNSI	RCATGY	2 cut(s)	1109, 2430
BstSCI	CCNGG	6 cut(s)	442, 587, 1003, 1070, 1598, 2027
BstSFI	CTRYAG	2 cut(s)	928, 2298
BstSLI	GKGCMC	1 cut(s)	2551
BstUI	CGCG	2 cut(s)	1700, 2084
BstV2I	GAAGAC	2 cut(s)	1314, 1947
BstX2I	RGATCY	3 cut(s)	1525, 1602, 1609
BstXI	CCANNNNNNTGG	2 cut(s)	1204, 1447
BstYI	RGATCY	3 cut(s)	1525, 1602, 1609
Bsu36I	CCTNAGG	1 cut(s)	618
BsuRI	GGCC	7 cut(s)	8, 136, 513, 1003, 1021, 1196, 2417
BtgI	CCRYGG	3 cut(s)	723, 1262, 1698
BtsCI	GGATG	7 cut(s)	269, 342, 670, 733, 925, 1678, 2024
BtsIMutI	CAGTG	5 cut(s)	223, 273, 2110, 2467, 2543
BveI	ACCTGC	1 cut(s)	809
Cac8I	GCNNGC	4 cut(s)	375, 511, 1783, 2428
CfoI	GCGC	1 cut(s)	2086
Cfr10I	RCCGGY	2 cut(s)	509, 1238
Cfr13I	GGNCC	5 cut(s)	1194, 1685, 2186, 2206, 2415
Cfr42I	CCGCGG	1 cut(s)	1701
Csp6I	GTAC	5 cut(s)	297, 642, 925, 1412, 1445
CspAI	ACCGGT	1 cut(s)	1238
CviQI	GTAC	5 cut(s)	297, 642, 925, 1412, 1445
DdeI	CTNAG	7 cut(s)	473, 618, 1606, 2055, 2102, 2450, 2561
DpnI	GATC	7 cut(s)	190, 868, 1527, 1604, 1611, 1657, 1669
DpnII	GATC	7 cut(s)	188, 866, 1525, 1602, 1609, 1655, 1667
DraI	TTTAAA	2 cut(s)	265, 1545
DraIII	CACNNNGTG	1 cut(s)	566
Eam1104I	CTCTTC	3 cut(s)	149, 573, 2504
EarI	CTCTTC	3 cut(s)	149, 573, 2504
Eco130I	CCWWGG	2 cut(s)	1096, 2365
Eco31I	GGTCTC	1 cut(s)	2231
Eco32I	GATATC	2 cut(s)	528, 2110
Eco47I	GGWCC	3 cut(s)	1685, 2186, 2206
Eco57I	CTGAAG	3 cut(s)	982, 2135, 2349
Eco81I	CCTNAGG	1 cut(s)	618
Eco88I	CYCGRG	3 cut(s)	341, 1813, 2349
EcoO109I	RGGNCCY	2 cut(s)	1685, 2206
EcoRI	GAATTC	1 cut(s)	933
EcoRII	CCWGG	2 cut(s)	442, 1070
EcoRV	GATATC	2 cut(s)	528, 2110
EcoT14I	CCWWGG	2 cut(s)	1096, 2365
EcoT22I	ATGCAT	1 cut(s)	1354
ErhI	CCWWGG	2 cut(s)	1096, 2365
FalI	AAGNNNNNCTT	2 cut(s)	883, 915
FaqI	GGGAC	2 cut(s)	950, 2172
FauI	CCCGC	1 cut(s)	203
FokI	GGATG	7 cut(s)	256, 349, 677, 740, 932, 1685, 2011
FspBI	CTAG	8 cut(s)	486, 1023, 1281, 1421, 1466, 1680, 2195, 2282
GlaI	GCGC	1 cut(s)	2085
GsaI	CCCAGC	1 cut(s)	1395
GsuI	CTGGAG	3 cut(s)	1054, 1731, 2511
HaeIII	GGCC	7 cut(s)	8, 136, 513, 1003, 1021, 1196, 2417
HapII	CCGG	7 cut(s)	510, 588, 759, 1004, 1239, 1600, 2029
HhaI	GCGC	1 cut(s)	2086
Hin6I	GCGC	1 cut(s)	2084
HinP1I	GCGC	1 cut(s)	2084
HincII	GTYRAC	2 cut(s)	30, 1402
HindII	GTYRAC	2 cut(s)	30, 1402
HpaI	GTTAAC	2 cut(s)	30, 1402
HpaII	CCGG	7 cut(s)	510, 588, 759, 1004, 1239, 1600, 2029
HphI	GGTGA	7 cut(s)	46, 320, 634, 707, 757, 2083, 2176
Hpy166II	GTNNAC	6 cut(s)	30, 466, 1028, 1244, 1266, 1402
Hpy188III	TCNNGA	7 cut(s)	186, 391, 1421, 1570, 1937, 2113, 2282
Hpy8I	GTNNAC	6 cut(s)	30, 466, 1028, 1244, 1266, 1402
Hpy99I	CGWCG	1 cut(s)	230
HpyCH4III	ACNGT	9 cut(s)	34, 261, 606, 695, 1176, 1224, 1427, 2462, 2538
HpyCH4IV	ACGT	2 cut(s)	738, 858
HpyCH4V	TGCA	9 cut(s)	104, 436, 450, 689, 1319, 1352, 1676, 1822, 2300
HpyF3I	CTNAG	7 cut(s)	473, 618, 1606, 2055, 2102, 2450, 2561
HpySE526I	ACGT	2 cut(s)	738, 858
HspAI	GCGC	1 cut(s)	2084
KroI	GCCGGC	1 cut(s)	509
KroNI	GCCGGC	1 cut(s)	511
KspAI	GTTAAC	2 cut(s)	30, 1402
KspI	CCGCGG	1 cut(s)	1701
Kzo9I	GATC	7 cut(s)	188, 866, 1525, 1602, 1609, 1655, 1667
LmnI	GCTCC	3 cut(s)	569, 2257, 2492
LweI	GCATC	6 cut(s)	235, 327, 1339, 1361, 1663, 2033
MaeI	CTAG	8 cut(s)	486, 1023, 1281, 1421, 1466, 1680, 2195, 2282
MaeII	ACGT	2 cut(s)	738, 858
MaeIII	GTNAC	5 cut(s)	708, 788, 797, 1101, 2224
MalI	GATC	7 cut(s)	190, 868, 1527, 1604, 1611, 1657, 1669
MboI	GATC	7 cut(s)	188, 866, 1525, 1602, 1609, 1655, 1667
MfeI	CAATTG	2 cut(s)	573, 1341
MflI	RGATCY	3 cut(s)	1525, 1602, 1609
MhlI	GDGCHC	2 cut(s)	1465, 2551
MlyI	GAGTC	7 cut(s)	135, 491, 1322, 1760, 2045, 2244, 2560
MmeI	TCCRAC	2 cut(s)	1138, 1566
Mph1103I	ATGCAT	1 cut(s)	1354
MroNI	GCCGGC	1 cut(s)	509
MslI	CAYNNNNRTG	2 cut(s)	1110, 1571
MspA1I	CMGCKG	3 cut(s)	983, 1700, 1892
MspCI	CTTAAG	1 cut(s)	847
MspI	CCGG	7 cut(s)	510, 588, 759, 1004, 1239, 1600, 2029
MspR9I	CCNGG	6 cut(s)	444, 589, 1005, 1072, 1600, 2029
MssI	GTTTAAAC	1 cut(s)	265
MunI	CAATTG	2 cut(s)	573, 1341
Mva1269I	GAATGC	2 cut(s)	1153, 1379
MvaI	CCWGG	2 cut(s)	444, 1072
MvnI	CGCG	2 cut(s)	1700, 2084
NaeI	GCCGGC	1 cut(s)	511
NciI	CCSGG	4 cut(s)	589, 1005, 1600, 2029
NdeII	GATC	7 cut(s)	188, 866, 1525, 1602, 1609, 1655, 1667
NgoMIV	GCCGGC	1 cut(s)	509
NlaIV	GGNNCC	8 cut(s)	615, 960, 1195, 1527, 1686, 1696, 2188, 2208
NmeAIII	GCCGAG	1 cut(s)	162
NmuCI	GTSAC	2 cut(s)	788, 797
NsiI	ATGCAT	1 cut(s)	1354
NspI	RCATGY	2 cut(s)	1109, 2430
PaeI	GCATGC	1 cut(s)	2430
PaeR7I	CTCGAG	1 cut(s)	2349
PaqCI	CACCTGC	1 cut(s)	809
PciI	ACATGT	1 cut(s)	1105
PctI	GAATGC	2 cut(s)	1153, 1379
PdiI	GCCGGC	1 cut(s)	511
PfeI	GAWTC	8 cut(s)	356, 1294, 1901, 1933, 1949, 2078, 2342, 2542
PinAI	ACCGGT	1 cut(s)	1238
PleI	GAGTC	7 cut(s)	135, 490, 1321, 1760, 2045, 2244, 2560
PmeI	GTTTAAAC	1 cut(s)	265
PpsI	GAGTC	7 cut(s)	135, 490, 1321, 1760, 2045, 2244, 2560
PpuMI	RGGWCCY	2 cut(s)	1685, 2206
PscI	ACATGT	1 cut(s)	1105
PsiI	TTATAA	3 cut(s)	990, 1059, 2445
Psp5II	RGGWCCY	2 cut(s)	1685, 2206
Psp6I	CCWGG	2 cut(s)	442, 1070
PspFI	CCCAGC	1 cut(s)	1391
PspGI	CCWGG	2 cut(s)	442, 1070
PspN4I	GGNNCC	8 cut(s)	615, 960, 1195, 1527, 1686, 1696, 2188, 2208
PspPI	GGNCC	5 cut(s)	1194, 1685, 2186, 2206, 2415
PspPPI	RGGWCCY	2 cut(s)	1685, 2206
PspXI	VCTCGAGB	1 cut(s)	2349
PstI	CTGCAG	1 cut(s)	2302
PsuI	RGATCY	3 cut(s)	1525, 1602, 1609
PvuII	CAGCTG	1 cut(s)	983
RsaI	GTAC	5 cut(s)	298, 643, 926, 1413, 1446
RsaNI	GTAC	5 cut(s)	297, 642, 925, 1412, 1445
RseI	CAYNNNNRTG	2 cut(s)	1110, 1571
SacII	CCGCGG	1 cut(s)	1701
Sau3AI	GATC	7 cut(s)	188, 866, 1525, 1602, 1609, 1655, 1667
Sau96I	GGNCC	5 cut(s)	1194, 1685, 2186, 2206, 2415
ScaI	AGTACT	2 cut(s)	298, 926
SchI	GAGTC	7 cut(s)	135, 491, 1322, 1760, 2045, 2244, 2560
ScrFI	CCNGG	6 cut(s)	444, 589, 1005, 1072, 1600, 2029
SduI	GDGCHC	2 cut(s)	1465, 2551
SfaNI	GCATC	6 cut(s)	235, 327, 1339, 1361, 1663, 2033
SfcI	CTRYAG	2 cut(s)	928, 2298
Sfr274I	CTCGAG	1 cut(s)	2349
Sfr303I	CCGCGG	1 cut(s)	1701
SgrBI	CCGCGG	1 cut(s)	1701
SinI	GGWCC	3 cut(s)	1685, 2186, 2206
SlaI	CTCGAG	1 cut(s)	2349
SmiMI	CAYNNNNRTG	2 cut(s)	1110, 1571
SmlI	CTYRAG	2 cut(s)	847, 2349
SmoI	CTYRAG	2 cut(s)	847, 2349
SphI	GCATGC	1 cut(s)	2430
SspMI	CTAG	8 cut(s)	486, 1023, 1281, 1421, 1466, 1680, 2195, 2282
StyD4I	CCNGG	6 cut(s)	442, 587, 1003, 1070, 1598, 2027
StyI	CCWWGG	2 cut(s)	1096, 2365
TaaI	ACNGT	9 cut(s)	34, 261, 606, 695, 1176, 1224, 1427, 2462, 2538
TaiI	ACGT	2 cut(s)	741, 861
TaqI	TCGA	8 cut(s)	423, 524, 601, 1459, 2049, 2202, 2350, 2388
TatI	WGTACW	4 cut(s)	296, 641, 924, 1411
TauI	GCSGC	3 cut(s)	234, 242, 1454
TfiI	GAWTC	8 cut(s)	356, 1294, 1901, 1933, 1949, 2078, 2342, 2542
TscAI	CASTG	5 cut(s)	223, 280, 2110, 2467, 2543
TseFI	GTSAC	2 cut(s)	788, 797
Tsp45I	GTSAC	2 cut(s)	788, 797
TspDTI	ATGAA	7 cut(s)	1005, 1128, 1160, 1377, 1527, 1640, 2543
TspGWI	ACGGA	4 cut(s)	712, 1177, 1387, 1961
TspRI	CASTG	5 cut(s)	223, 280, 2110, 2467, 2543
Vha464I	CTTAAG	1 cut(s)	847
VpaK11BI	GGWCC	3 cut(s)	1685, 2186, 2206
XapI	RAATTY	2 cut(s)	775, 933
XbaI	TCTAGA	2 cut(s)	1420, 2281
XceI	RCATGY	2 cut(s)	1109, 2430
XhoI	CTCGAG	1 cut(s)	2349
XspI	CTAG	8 cut(s)	486, 1023, 1281, 1421, 1466, 1680, 2195, 2282
ZrmI	AGTACT	2 cut(s)	298, 926
Zsp2I	ATGCAT	1 cut(s)	1354

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.