Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0010363

Physical Location & Seq

Genomic Coordinates Reverse (-)

63642499 .. 63649091

Gene Structure 6593 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00384130.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2577 bp

ATGTGGGCCCCAACACTCCAAGCACCATTTACACTGAAGCTCCCTCATCTCCTTGTCCAACCTTCTCTAACCTCCAACACGACCCTCGTCCCCATCACAGCAACTCAAACCTCAAGACCCAGAAGAAGACGACCGCGCCTCTCTTTCTTTCGAGCCCATTTCCAAACCCTCAAGCCCAAATCACGCCCTCACCGCACATTCCTCACCAGAGTCACTAGTGACGATGGTGACGCTGGTCATCATACACACACGGGTATGGAAGAAAGAGAGACCAGCCCTTCTTCTTCTGGTCCGAATGTTGGTGATGGTTATGTAGCCTTGTTTATTCGGATGCTGGGGCTGGACCATGACTCTCTTGACAGAGAGCAAGCAATAGTGGCGCTGTGGAAATATTCACTTGGTGGGAAGAAGTATATTGATGCCATCATGCAGTTTCCTGACTGCATACATTTGATTCTGAACTTACTAAGATCAGAGTCCAGCTCTACTTGTGAAGCTGCTGCTGGTCTTTTGAGATCAATAGCTCTAGTTAATTCATATAGGGATTTGGTAGCAAACAGTGGAGCCATTGAAGAGATTACCGGGTTGCTCGCTCGCGCTTCCACGACTTCTGAGGTGAAGGAGCAGGCTATATGTACTTTGTGGAACTTGAGTGTAGATGAGAAGTTCAGAATGAAGATTGCTAACAGTGATCTCTTGCCGTTACTGGTTAAGTCCTTGGATGATGAGGACGTCAAGGTGAAGGAAGCGGCCGGAGGGGTTTTGGCAAATTTGGCATTAAGCGAATTTAATCATGGCATTATGGTTGAAGCTGGTGTTATACCGCAATTGGCAAAACTCTTAAGAACTGACATTGAAGGATCTAAAGTAATTAAAAAGGAGGCAAGGAATGCTCTGTTGGAACTATGTAAGGATAAATATCATAGAATTACTATCCTAGAGGAAGGTCTTGTTCCGGTACCCATGATTGGTGCAGCTGCTTATAAGTCATTCAGACCAGGTCTTTATTCATGGCCTACTTTGCCAGACGGTACACAGATTGAGCAGACTTCTAAAACTCCTTCCAGGTTTGGTGCCTCTGAGTTACTCCTTGGATTACATGTTGATGATAAGAATGCAAACATAGAGGAAGCAAAGATGAATGCAGTAGTTGGACGGACGCAGCAACAGTTTCTGGCTCGTATTGGGGCCATTGAAATGGACGATGAAAAGAAACAGTCTGAATTAGCAACTGGTCAACAACTCACACTTTTGCCATGGGTGGACGGGGTTGCTAGATTGGTTTTGATTCTTGGACTTGAAGATGAGTCAGCAATAGTGAGAGCTGCAGAGTCAATTGCTGATGCATCTATAAATGAACATATGCGGATAGCATTCAAGGAAGCTGGGGCAGTTAAGCTCTTAGTTCAGCTTCTTAACAGTAAGAATGATGCTGTCAGACTAGCTGCAACTCAAGCTCTAGAGAGGTTGTCTGTCAGCAATGTTGTTTGCCAGATAATTGAAGCTGAAGGTGCTTTAGATCCTTTGGTTAATATTTTAAAGAACCCAGAGATCCCTGAAATATTGATGGAAAAGACCTTGGATACTCTTGGGCGGATCTTAGATCCTAGTAAAGAGATGAAGTCAAAGTTTTATGATGGACCAGTAAATGGATCGGAAAAGGGTTCGGATGCTGCAAGAGGCCCTTATGGTTCCAAAGGAATAACTGGAGATGTGGCTCATACACCGATTTCAAAAACAAATCCCAGGGAGGCTGTGCTTGATTCTGGGGTTATCACTCGCCTTCTTGAGATATTAAAGATCCCAACCCCGAGACTACAAAGAAAAGCGGCTTCCATCCTTGAGTTCTGCACGGTTATTGACCCAAGCATGGATTCTATTACTTCAGCAGATATAGAATCTGGTTTGGATGTTGTATTCCAACAAAAGGCCCTTGAAGACATGGAATCTGAAGTAGATTATCGGCAGCCAGGGAAACATCTACTTGAAGTAGAAGAAGCCGGTCTTGTTATATCAGCAGCCTCCCGGTTACTAACAAAACTGCTCGACTCTAAGAAGTTTTGCCAAAAAATAGATTCCGCCCATTTCACCAAATTGCTCTGTAATATCCTCAAGTCTGATATTCCCCTTCGCAACAAAGATTGGGTTGCAGGTTGTTTGGTGAAACTTGGTTCTCTTTCTGGTCCCAGACTAAATGTCGATGACCCAATCAACATGGAAGTAACTCTCCACGAGACCATTCCCAGACTCATGGAGCAGCTCAAAACCTCCTTCTCTCCGCAATCAAAGGAAGCTGCCGTTATAGAACTCAACAGAATAATCTCTGAAGGGGTGGTTGATTCCACTCGGGCCGTTGCTGCAGAGGGAGGAATATTTCCTTTAGTGAAACTGATTGAAGAAGGGAGTGAGAGGGCCGTCGAAGCATGTTTGGCTATATTGTATAATCTGAGCATGGACAGTGAGAACCATTCGGCAATTCTAGCTGCTGGAGCTGTACCAGTTTTGCGCAGAATAATTCTGTCAGAAAGACCACAAATTGTACGACGACTACATGGTCTAAACTCAAATGTTTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm KAP

Protein Analysis

858

Amino Acids

93.94

Weight (kDa)

6.0

Isoelectric Point (pI)

41.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ARM_ARMC5	PF24768	148 - 317	1.7e-10	ARMC5
ARM_PUB	PF25598	180 - 319	2.9e-07	Plant U-box protein ARM repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010363)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G23180 AT1G23180
fragaria_vesca	FvH4_4g34070
malus_domestica	MD16G1022800.v1.1
prunus_persica	Prupe.1G330100_v2.0.a1 Prupe.1G330100_v2.0.a1 Prupe.1G330100_v2.0.a1 Prupe.1G330100_v2.0.a1
pyrus_communis	pycom16g02010
rosa_chinensis	RchiOBHm_Chr4g0443581
rosa_laevigata	RLG00000005913
rosa_multiflora	Rmu_sc0001118.1_g000017 Rmu_sc0026347.1_g000006
rosa_roxburghii	Rroxscaffold_5G00384130
rosa_samantha	Rh4AG403200 Rh4AG405100 Rh4BG416100 Rh4CG430600 Rh4DG410500 Rh4DG411700
rosa_wichuraiana	Rw4G034780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	984
AasI	GACNNNNNNGTC	1 cut(s)	2553
AatII	GACGTC	1 cut(s)	735
Acc16I	TGCGCA	1 cut(s)	2507
Acc36I	ACCTGC	1 cut(s)	2141
Acc65I	GGTACC	1 cut(s)	958
AccB1I	GGYRCC	2 cut(s)	958, 1073
AccB7I	CCANNNNNTGG	1 cut(s)	1649
AccII	CGCG	2 cut(s)	136, 597
AciI	CCGC	9 cut(s)	134, 193, 749, 824, 1366, 1594, 1829, 2079, 2279
AclWI	GGATC	7 cut(s)	868, 1514, 1546, 1598, 1604, 1660, 1795
AcoI	YGGCCR	1 cut(s)	750
AcsI	RAATTY	2 cut(s)	769, 785
AcuI	CTGAAG	5 cut(s)	56, 1527, 1869, 1971, 2346
AcyI	GRCGYC	1 cut(s)	732
AdeI	CACNNNGTG	1 cut(s)	401
AfaI	GTAC	5 cut(s)	637, 960, 1033, 2496, 2541
AfiI	CCNNNNNNNGG	5 cut(s)	299, 968, 1649, 1870, 1927
AflII	CTTAAG	1 cut(s)	841
AflIII	ACRYGT	1 cut(s)	1099
AhdI	GACNNNNNGTC	1 cut(s)	2195
AhlI	ACTAGT	1 cut(s)	215
AjnI	CCWGG	4 cut(s)	997, 1064, 1745, 1969
AjuI	GAANNNNNNNTTGG	4 cut(s)	881, 913, 1858, 1890
Alw26I	GTCTC	3 cut(s)	263, 1807, 2228
AlwI	GGATC	7 cut(s)	868, 1514, 1546, 1598, 1604, 1660, 1795
AlwNI	CAGNNNCTG	1 cut(s)	1174
Ama87I	CYCGRG	2 cut(s)	1810, 2346
AoxI	GGCC	8 cut(s)	6, 750, 1013, 1188, 1681, 1929, 2349, 2412
ApaI	GGGCCC	1 cut(s)	10
ApoI	RAATTY	2 cut(s)	769, 785
Asp718I	GGTACC	1 cut(s)	958
AspLEI	GCGC	4 cut(s)	138, 382, 599, 2508
AsuC2I	CCSGG	2 cut(s)	583, 2026
AsuHPI	GGTGA	8 cut(s)	182, 196, 239, 314, 628, 751, 2080, 2173
AvaI	CYCGRG	2 cut(s)	1810, 2346
AvaII	GGWCC	4 cut(s)	290, 343, 1640, 2183
BaeGI	GKGCMC	1 cut(s)	10
BanI	GGYRCC	2 cut(s)	958, 1073
BanII	GRGCYC	2 cut(s)	10, 157
BauI	CACGAG	1 cut(s)	2231
BbsI	GAAGAC	2 cut(s)	133, 1944
BccI	CCATC	7 cut(s)	101, 218, 299, 431, 1561, 1631, 1844
BceAI	ACGGC	4 cut(s)	685, 2282, 2336, 2399
BciT130I	CCWGG	4 cut(s)	999, 1066, 1747, 1971
BciVI	GTATCC	1 cut(s)	1576
BcnI	CCSGG	2 cut(s)	583, 2026
BcoDI	GTCTC	3 cut(s)	263, 1807, 2228
BcuI	ACTAGT	1 cut(s)	215
BfaI	CTAG	8 cut(s)	216, 527, 938, 1275, 1442, 1460, 1608, 2480
BfmI	CTRYAG	2 cut(s)	1326, 2358
BfoI	RGCGCY	1 cut(s)	383
BfrI	CTTAAG	1 cut(s)	841
BfuAI	ACCTGC	1 cut(s)	2141
BfuI	GTATCC	1 cut(s)	1576
Bme1390I	CCNGG	6 cut(s)	583, 999, 1066, 1747, 1971, 2026
Bme18I	GGWCC	4 cut(s)	290, 343, 1640, 2183
BmeRI	GACNNNNNGTC	1 cut(s)	2195
BmeT110I	CYCGRG	2 cut(s)	1810, 2346
BmiI	GGNNCC	8 cut(s)	8, 9, 565, 960, 1075, 1189, 1693, 2185
BmrFI	CCNGG	6 cut(s)	583, 999, 1066, 1747, 1971, 2026
BmsI	GCATC	6 cut(s)	321, 409, 1333, 1355, 1420, 1660
BoxI	GACNNNNGTC	2 cut(s)	86, 234
BpiI	GAAGAC	2 cut(s)	133, 1944
BplI	GAGNNNNNCTC	2 cut(s)	467, 499
BpmI	CTGGAG	2 cut(s)	1728, 2508
BpuEI	CTTGAG	7 cut(s)	97, 155, 670, 1437, 1808, 1862, 2096
BpuMI	CCSGG	2 cut(s)	583, 2026
BsaBI	GATNNNNATC	1 cut(s)	918
BsaHI	GRCGYC	1 cut(s)	732
BsaI	GGTCTC	2 cut(s)	263, 2228
BsaJI	CCNNGG	7 cut(s)	717, 1090, 1256, 1578, 1745, 1746, 1970
BsaWI	WCCGGW	1 cut(s)	955
BsaXI	ACNNNNNCTCC	2 cut(s)	24, 54
Bsc4I	CCNNNNNNNGG	5 cut(s)	299, 968, 1649, 1870, 1927
Bse118I	RCCGGY	1 cut(s)	2000
Bse1I	ACTGG	5 cut(s)	711, 1237, 1643, 1711, 2498
Bse3DI	GCAATG	1 cut(s)	1486
Bse8I	GATNNNNATC	1 cut(s)	918
BseBI	CCWGG	4 cut(s)	999, 1066, 1747, 1971
BseDI	CCNNGG	7 cut(s)	717, 1090, 1256, 1578, 1745, 1746, 1970
BseGI	GGATG	5 cut(s)	336, 727, 1675, 1836, 1915
BseJI	GATNNNNATC	1 cut(s)	918
BseLI	CCNNNNNNNGG	5 cut(s)	299, 968, 1649, 1870, 1927
BseMI	GCAATG	1 cut(s)	1486
BseMII	CTCAG	3 cut(s)	603, 1071, 2438
BseNI	ACTGG	5 cut(s)	711, 1237, 1643, 1711, 2498
BseSI	GKGCMC	1 cut(s)	10
BseX3I	CGGCCG	1 cut(s)	750
BseYI	CCCAGC	2 cut(s)	334, 1385
BsgI	GTGCAG	2 cut(s)	993, 1834
Bsh1236I	CGCG	2 cut(s)	136, 597
Bsh1285I	CGRYCG	2 cut(s)	134, 753
BshFI	GGCC	8 cut(s)	8, 752, 1015, 1190, 1683, 1931, 2351, 2414
BshNI	GGYRCC	2 cut(s)	958, 1073
BsiEI	CGRYCG	2 cut(s)	134, 753
BsiHKCI	CYCGRG	2 cut(s)	1810, 2346
BsiSI	CCGG	5 cut(s)	582, 753, 956, 2001, 2026
BslFI	GGGAC	2 cut(s)	74, 2169
BslI	CCNNNNNNNGG	5 cut(s)	299, 968, 1649, 1870, 1927
BsmAI	GTCTC	3 cut(s)	263, 1807, 2228
BsmFI	GGGAC	2 cut(s)	74, 2169
BsmI	GAATGC	4 cut(s)	895, 1120, 1147, 1373
BsnI	GGCC	8 cut(s)	8, 752, 1015, 1190, 1683, 1931, 2351, 2414
Bso31I	GGTCTC	2 cut(s)	263, 2228
BsoBI	CYCGRG	2 cut(s)	1810, 2346
Bsp120I	GGGCCC	1 cut(s)	6
Bsp1286I	GDGCHC	2 cut(s)	10, 157
Bsp19I	CCATGG	1 cut(s)	1256
BspACI	CCGC	9 cut(s)	134, 193, 749, 824, 1366, 1594, 1829, 2079, 2279
BspANI	GGCC	8 cut(s)	8, 752, 1015, 1190, 1683, 1931, 2351, 2414
BspCNI	CTCAG	3 cut(s)	604, 1072, 2439
BspFNI	CGCG	2 cut(s)	136, 597
BspLI	GGNNCC	8 cut(s)	8, 9, 565, 960, 1075, 1189, 1693, 2185
BspMAI	CTGCAG	2 cut(s)	1330, 2362
BspMI	ACCTGC	1 cut(s)	2141
BspPI	GGATC	7 cut(s)	868, 1514, 1546, 1598, 1604, 1660, 1795
BspT107I	GGYRCC	2 cut(s)	958, 1073
BspTI	CTTAAG	1 cut(s)	841
BspTNI	GGTCTC	2 cut(s)	263, 2228
BsrDI	GCAATG	1 cut(s)	1486
BsrFI	RCCGGY	1 cut(s)	2000
BsrI	ACTGG	5 cut(s)	711, 1237, 1643, 1711, 2498
BssAI	RCCGGY	1 cut(s)	2000
BssECI	CCNNGG	7 cut(s)	717, 1090, 1256, 1578, 1745, 1746, 1970
BssNI	GRCGYC	1 cut(s)	732
BssSI	CACGAG	1 cut(s)	2231
BssT1I	CCWWGG	4 cut(s)	717, 1090, 1256, 1578
Bst2BI	CACGAG	1 cut(s)	2231
Bst2UI	CCWGG	4 cut(s)	999, 1066, 1747, 1971
Bst4CI	ACNGT	8 cut(s)	560, 689, 1031, 1170, 1218, 1421, 1855, 2459
Bst6I	CTCTTC	1 cut(s)	567
BstACI	GRCGYC	1 cut(s)	732
BstAFI	CTTAAG	1 cut(s)	841
BstAPI	GCANNNNNTGC	1 cut(s)	890
BstC8I	GCNNGC	4 cut(s)	369, 591, 595, 627
BstDEI	CTNAG	7 cut(s)	467, 612, 1080, 1402, 1600, 2052, 2447
BstDSI	CCRYGG	1 cut(s)	1256
BstF5I	GGATG	5 cut(s)	336, 727, 1675, 1836, 1915
BstFNI	CGCG	2 cut(s)	136, 597
BstH2I	RGCGCY	1 cut(s)	383
BstHHI	GCGC	4 cut(s)	138, 382, 599, 2508
BstMAI	GTCTC	3 cut(s)	263, 1807, 2228
BstMCI	CGRYCG	2 cut(s)	134, 753
BstNI	CCWGG	4 cut(s)	999, 1066, 1747, 1971
BstNSI	RCATGY	2 cut(s)	1103, 2427
BstPAI	GACNNNNGTC	2 cut(s)	86, 234
BstSCI	CCNGG	6 cut(s)	581, 997, 1064, 1745, 1969, 2024
BstSFI	CTRYAG	2 cut(s)	1326, 2358
BstSLI	GKGCMC	1 cut(s)	10
BstUI	CGCG	2 cut(s)	136, 597
BstV2I	GAAGAC	2 cut(s)	133, 1944
BstX2I	RGATCY	6 cut(s)	860, 1519, 1551, 1596, 1603, 1800
BstXI	CCANNNNNNTGG	2 cut(s)	1198, 2251
BstYI	RGATCY	6 cut(s)	860, 1519, 1551, 1596, 1603, 1800
BstZI	CGGCCG	1 cut(s)	750
BsuI	GTATCC	1 cut(s)	1576
BsuRI	GGCC	8 cut(s)	8, 752, 1015, 1190, 1683, 1931, 2351, 2414
BtgI	CCRYGG	1 cut(s)	1256
BtsCI	GGATG	5 cut(s)	336, 727, 1675, 1836, 1915
BtsIMutI	CAGTG	4 cut(s)	32, 565, 694, 2464
BveI	ACCTGC	1 cut(s)	2141
Cac8I	GCNNGC	4 cut(s)	369, 591, 595, 627
CaiI	CAGNNNCTG	1 cut(s)	1174
CfoI	GCGC	4 cut(s)	138, 382, 599, 2508
Cfr10I	RCCGGY	1 cut(s)	2000
CseI	GACGC	2 cut(s)	239, 1168
CsiI	ACCWGGT	1 cut(s)	997
Csp6I	GTAC	5 cut(s)	636, 959, 1032, 2495, 2540
CviQI	GTAC	5 cut(s)	636, 959, 1032, 2495, 2540
DdeI	CTNAG	7 cut(s)	467, 612, 1080, 1402, 1600, 2052, 2447
DraI	TTTAAA	1 cut(s)	1539
DraIII	CACNNNGTG	1 cut(s)	401
DrdI	GACNNNNNNGTC	1 cut(s)	2553
DriI	GACNNNNNGTC	1 cut(s)	2195
DseDI	GACNNNNNNGTC	1 cut(s)	2553
EaeI	YGGCCR	1 cut(s)	750
EagI	CGGCCG	1 cut(s)	750
Eam1104I	CTCTTC	1 cut(s)	567
Eam1105I	GACNNNNNGTC	1 cut(s)	2195
EarI	CTCTTC	1 cut(s)	567
EciI	GGCGGA	2 cut(s)	1609, 2068
EclXI	CGGCCG	1 cut(s)	750
Eco130I	CCWWGG	4 cut(s)	717, 1090, 1256, 1578
Eco24I	GRGCYC	2 cut(s)	10, 157
Eco31I	GGTCTC	2 cut(s)	263, 2228
Eco47I	GGWCC	4 cut(s)	290, 343, 1640, 2183
Eco52I	CGGCCG	1 cut(s)	750
Eco57I	CTGAAG	5 cut(s)	56, 1527, 1869, 1971, 2346
Eco88I	CYCGRG	2 cut(s)	1810, 2346
EcoO109I	RGGNCCY	3 cut(s)	7, 1682, 1930
EcoRII	CCWGG	4 cut(s)	997, 1064, 1745, 1969
EcoT14I	CCWWGG	4 cut(s)	717, 1090, 1256, 1578
EcoT22I	ATGCAT	1 cut(s)	1348
EcoT38I	GRGCYC	2 cut(s)	10, 157
ErhI	CCWWGG	4 cut(s)	717, 1090, 1256, 1578
FalI	AAGNNNNNCTT	4 cut(s)	1669, 1701, 1989, 2021
FaqI	GGGAC	2 cut(s)	74, 2169
FauNDI	CATATG	1 cut(s)	1362
FokI	GGATG	5 cut(s)	343, 734, 1682, 1823, 1922
FriOI	GRGCYC	2 cut(s)	10, 157
FspBI	CTAG	8 cut(s)	216, 527, 938, 1275, 1442, 1460, 1608, 2480
FspI	TGCGCA	1 cut(s)	2507
GlaI	GCGC	4 cut(s)	137, 381, 598, 2507
GsaI	CCCAGC	2 cut(s)	338, 1389
GsuI	CTGGAG	2 cut(s)	1728, 2508
HaeII	RGCGCY	1 cut(s)	383
HaeIII	GGCC	8 cut(s)	8, 752, 1015, 1190, 1683, 1931, 2351, 2414
HapII	CCGG	5 cut(s)	582, 753, 956, 2001, 2026
HgaI	GACGC	2 cut(s)	239, 1168
HhaI	GCGC	4 cut(s)	138, 382, 599, 2508
Hin1I	GRCGYC	1 cut(s)	732
Hin6I	GCGC	4 cut(s)	136, 380, 597, 2506
HinP1I	GCGC	4 cut(s)	136, 380, 597, 2506
HincII	GTYRAC	1 cut(s)	1238
HindII	GTYRAC	1 cut(s)	1238
HpaII	CCGG	5 cut(s)	582, 753, 956, 2001, 2026
HphI	GGTGA	8 cut(s)	182, 196, 239, 314, 628, 751, 2080, 2173
Hpy166II	GTNNAC	3 cut(s)	1034, 1238, 1264
Hpy188III	TCNNGA	5 cut(s)	114, 356, 437, 1460, 1787
Hpy8I	GTNNAC	3 cut(s)	1034, 1238, 1264
Hpy99I	CGWCG	2 cut(s)	2420, 2547
HpyCH4III	ACNGT	8 cut(s)	560, 689, 1031, 1170, 1218, 1421, 1855, 2459
HpyCH4IV	ACGT	1 cut(s)	732
HpyF3I	CTNAG	7 cut(s)	467, 612, 1080, 1402, 1600, 2052, 2447
HpySE526I	ACGT	1 cut(s)	732
Hsp92I	GRCGYC	1 cut(s)	732
HspAI	GCGC	4 cut(s)	136, 380, 597, 2506
KpnI	GGTACC	1 cut(s)	962
LmnI	GCTCC	5 cut(s)	45, 563, 622, 2254, 2489
LweI	GCATC	6 cut(s)	321, 409, 1333, 1355, 1420, 1660
MabI	ACCWGGT	1 cut(s)	997
MaeI	CTAG	8 cut(s)	216, 527, 938, 1275, 1442, 1460, 1608, 2480
MaeII	ACGT	1 cut(s)	732
MaeIII	GTNAC	7 cut(s)	211, 218, 227, 702, 1083, 2028, 2221
MfeI	CAATTG	2 cut(s)	827, 1335
MflI	RGATCY	6 cut(s)	860, 1519, 1551, 1596, 1603, 1800
MhlI	GDGCHC	2 cut(s)	10, 157
MlyI	GAGTC	7 cut(s)	219, 344, 485, 1316, 1340, 2042, 2241
MmeI	TCCRAC	5 cut(s)	82, 99, 879, 1132, 1945
Mph1103I	ATGCAT	1 cut(s)	1348
MslI	CAYNNNNRTG	3 cut(s)	254, 1104, 1196
MspA1I	CMGCKG	1 cut(s)	977
MspCI	CTTAAG	1 cut(s)	841
MspI	CCGG	5 cut(s)	582, 753, 956, 2001, 2026
MspR9I	CCNGG	6 cut(s)	583, 999, 1066, 1747, 1971, 2026
MunI	CAATTG	2 cut(s)	827, 1335
Mva1269I	GAATGC	4 cut(s)	895, 1120, 1147, 1373
MvaI	CCWGG	4 cut(s)	999, 1066, 1747, 1971
MvnI	CGCG	2 cut(s)	136, 597
NciI	CCSGG	2 cut(s)	583, 2026
NcoI	CCATGG	1 cut(s)	1256
NdeI	CATATG	1 cut(s)	1362
NlaIV	GGNNCC	8 cut(s)	8, 9, 565, 960, 1075, 1189, 1693, 2185
NmuCI	GTSAC	3 cut(s)	211, 218, 227
NsbI	TGCGCA	1 cut(s)	2507
NsiI	ATGCAT	1 cut(s)	1348
NspI	RCATGY	2 cut(s)	1103, 2427
PasI	CCCWGGG	1 cut(s)	1746
PciI	ACATGT	1 cut(s)	1099
PctI	GAATGC	4 cut(s)	895, 1120, 1147, 1373
PfeI	GAWTC	8 cut(s)	454, 1288, 1763, 1874, 1898, 1946, 2075, 2339
PflFI	GACNNNGTC	1 cut(s)	999
PflMI	CCANNNNNTGG	1 cut(s)	1649
PleI	GAGTC	7 cut(s)	218, 344, 484, 1315, 1339, 2042, 2241
PpsI	GAGTC	7 cut(s)	218, 344, 484, 1315, 1339, 2042, 2241
PscI	ACATGT	1 cut(s)	1099
PshAI	GACNNNNGTC	2 cut(s)	86, 234
PsiI	TTATAA	1 cut(s)	984
Psp6I	CCWGG	4 cut(s)	997, 1064, 1745, 1969
PspFI	CCCAGC	2 cut(s)	334, 1385
PspGI	CCWGG	4 cut(s)	997, 1064, 1745, 1969
PspN4I	GGNNCC	8 cut(s)	8, 9, 565, 960, 1075, 1189, 1693, 2185
PspOMI	GGGCCC	1 cut(s)	6
PstI	CTGCAG	2 cut(s)	1330, 2362
PstNI	CAGNNNCTG	1 cut(s)	1174
PsuI	RGATCY	6 cut(s)	860, 1519, 1551, 1596, 1603, 1800
PsyI	GACNNNGTC	1 cut(s)	999
PvuII	CAGCTG	1 cut(s)	977
RsaI	GTAC	5 cut(s)	637, 960, 1033, 2496, 2541
RsaNI	GTAC	5 cut(s)	636, 959, 1032, 2495, 2540
RseI	CAYNNNNRTG	3 cut(s)	254, 1104, 1196
SchI	GAGTC	7 cut(s)	219, 344, 485, 1316, 1340, 2042, 2241
ScrFI	CCNGG	6 cut(s)	583, 999, 1066, 1747, 1971, 2026
SduI	GDGCHC	2 cut(s)	10, 157
SexAI	ACCWGGT	1 cut(s)	997
SfaNI	GCATC	6 cut(s)	321, 409, 1333, 1355, 1420, 1660
SfcI	CTRYAG	2 cut(s)	1326, 2358
SinI	GGWCC	4 cut(s)	290, 343, 1640, 2183
SmiMI	CAYNNNNRTG	3 cut(s)	254, 1104, 1196
SmlI	CTYRAG	8 cut(s)	112, 170, 649, 841, 1452, 1787, 1841, 2111
SmoI	CTYRAG	8 cut(s)	112, 170, 649, 841, 1452, 1787, 1841, 2111
SpeI	ACTAGT	1 cut(s)	215
SsiI	CCGC	9 cut(s)	134, 193, 749, 824, 1366, 1594, 1829, 2079, 2279
SspI	AATATT	4 cut(s)	392, 1534, 1563, 2373
SspMI	CTAG	8 cut(s)	216, 527, 938, 1275, 1442, 1460, 1608, 2480
StyD4I	CCNGG	6 cut(s)	581, 997, 1064, 1745, 1969, 2024
StyI	CCWWGG	4 cut(s)	717, 1090, 1256, 1578
TaaI	ACNGT	8 cut(s)	560, 689, 1031, 1170, 1218, 1421, 1855, 2459
TaiI	ACGT	1 cut(s)	735
TaqI	TCGA	4 cut(s)	151, 2046, 2199, 2418
TatI	WGTACW	1 cut(s)	635
TauI	GCSGC	2 cut(s)	752, 1832
TfiI	GAWTC	8 cut(s)	454, 1288, 1763, 1874, 1898, 1946, 2075, 2339
TscAI	CASTG	4 cut(s)	39, 565, 694, 2464
TseFI	GTSAC	3 cut(s)	211, 218, 227
Tsp45I	GTSAC	3 cut(s)	211, 218, 227
TspDTI	ATGAA	7 cut(s)	525, 689, 999, 1154, 1221, 1371, 1634
TspGWI	ACGGA	1 cut(s)	1171
TspRI	CASTG	4 cut(s)	39, 565, 694, 2464
Tth111I	GACNNNGTC	1 cut(s)	999
Van91I	CCANNNNNTGG	1 cut(s)	1649
Vha464I	CTTAAG	1 cut(s)	841
VpaK11BI	GGWCC	4 cut(s)	290, 343, 1640, 2183
XapI	RAATTY	2 cut(s)	769, 785
XbaI	TCTAGA	1 cut(s)	1459
XceI	RCATGY	2 cut(s)	1103, 2427
XspI	CTAG	8 cut(s)	216, 527, 938, 1275, 1442, 1460, 1608, 2480
ZraI	GACGTC	1 cut(s)	733
Zsp2I	ATGCAT	1 cut(s)	1348

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.