Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0010363

Physical Location & Seq

Genomic Coordinates Reverse (-)

61748722 .. 61753138

Gene Structure 4417 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G034780.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2589 bp

ATGTGGGCCCCAACACTCCAAGCACCATTTACACTGAAGCTCCCTCATCTCCTTCTCCAACCTTGTCTAACCTCCAATACGACCCTCCTCGTCCCCATCACAGCAACTCAAACCTCAAGACCCAGAAGAAGACGACCGCGCCTCTCTTTCTTTCGAGCCCATTTCCAAACCCTCAAGCCCAAATCACGCCCTCACCGCACATTCCTCACCAGAGTCACTAGTGACGATGGTGACGCTGGTCATCATACACACACGGGTATGGAAGAAAGAGAGACCAGCCCTTCACCTTCTTCTTCTGGTCCGAATGTTGGTGATGGTTATGTAGCCTTGTTTATTCGGATGCTTGGGCTGGACCATGACTCTCTTGACAGAGAGCAAGCAATAGTGGCGCTGTGGAAATATTCACTTGGTGGGAAGAAGTATATTGATGCCATCATGCAGTTTCCTGACTGCATACATTTGATTCTGAACTTACTCAGATCAGAGTCCAGCTCTACTAGTGAAGCTGCTGCTGGTCTTTTGAGATCAGTAGCTCTAGTTAATTCATATAGGGATTTGGTAGCAAGCAGTGGAGCCATCGAAGAGATTACCGGGTTGCTCACTCGAGCTTCCACGACTTCTGAGGTGAAGGAGCAGGCTATATGTACTCTGTGGAACTTGAGTGTAGATGAGAAGTTCAGAATGAAGATTGCTAACAGTGATATCTTGCCGTTACTGGTTAAGTCCTTGGATGATGAGGACGTCAAAGTGAAGGAAGCGGCGGGAGGGGTTTTGGCAAATTTGGCATTAAGCGAATTTAATCACGGCATTATGGTTGAAGCTGGTGTTATACCACAGTTGGCAAAACTCTTAAGAACTGACATTGAAGGATCTAAAGTAATTAAAAAGGAGGCAAGGAATGCTCTGTTGGAACTATGTAAGGATAGATATCATAGAATTACTATCCTAGAGGAAGGTCTTGTTCCGGTACCCATGATTGGTGCAGCTGCTTATAAGTCATTCAGACCAGGTCTTTATTCATGGCCTACCTTGCCAGACGGTACACAGATTGAGCAGACTTCTAAAACTCCTTCCAGGTTTGGTGCCTCTGAGTTGCTCCTTGGATTACATGTTGATGATAAGAAGGCAAACATAGAGGAAGCAAAGATGAATGCAGTAGTTGGACGGACGCAGCAACAGTTTCTGGCTCGTATTGGGGCCATTGAAATGGATGATGAAAAGAAACAGTCTGAATTAGCAACTGGTCAACAACTCACACTTTTGCCATGGGTGGACGGGGTTGCTAGATTGGTTTTGATTCTTGGACTTGAAGACGAGTCAGCAATAGTGAGAGCTGCAGAGTCAATTGCTGATGCATCTATAAATGAACATATGCGGATAGCATTCAAGGAAGCTGGGGCAGTTAAGCTATTAGTTCAGCTTCTTAACAGTAAGAATGATGCTGTCAGACTAGCTGCAACTCAAGCTCTAGAGAGGTTGTCTGTCAGCAATGTTGTTTGCCAGATAATTGAAGCTGAAGGTGCTTTAGATCCTTTGGTTAATATTTTAAAGAGCCCAGAGATCCCTGAAATATTGATGGAAAAGACCTTGGATACTCTTGGGCGGATCTTAGATCCTAGTAAAGAGATGAAGTCAAAGTTTTATGATGGACCAGTAAATGGATCGGATGCTGCAAGAGGTCCTTATGGTTCCAAAGGAATAACCGGAGATGTGGCTCATACACCGATTTCGAAAACAAATCCCAGGGAGGCTGTGCTTGATTCTGGGGTTATCACTCGCCTTCTTGACATATTAAAGACCCCAACCCCGAGACTACAAAGAAAAGCGGCTTCCATCCTTGAGTTCTGCACAGTTATTGACCCAAGCATGGATACTATTACTTCAGCAGATATAGAATCTGGTTTGGATGTTGTATTCCAACAAAAGGCCCTTGAAGACATGGAATCTGAAGTAGATTATCGGCAGCCAGGGAAACATGTCCTTGAAGTTGAAGAAGCCGGTCTTGTTATATCAGCAGCCTCCCGGTTACTAACAAAACTGCTCGACTCTAAGAAGTTTTGCCAAAAAATAGATTCCGCCCATTTCACCAAATTGCTCTGTAATATCCTCAAGTCTGATATTCCCCTTCGCAACAAAGATTGGGTTGCTGGTTGTTTGGTGAAACTTGGTTCTCTTTCTGGTCCCAGACTAAATGTCGATGACCCAATCAACATGGAAGTAACTCTCCACGAGACCATTCCCAGACTCATGGAGCAGCTCAAAACCTCCTTCTCTCCGCAATCAAAGGAAGCTGCCGTTATAGAACTCAACAGAATAATCTCTGAAGGGGTGGTTGATTCCACTCGAGCCGTTGCTGCAGAGGGAGGAATATTTCCTTTAGTGAAACTGATTGAAGAAGGGAGTGAGAGGGCCGTCGAAGCATGTTTGGCTATATTATATAATCTGAGCATGGACAGTGAGAACCATTCGGCAATTCTAGCTGCTGGAGCTGTACCAGTTTTGCGCAGAATAATTCTATCAGAAAGACCACAGTGGAGACGGGCACTTCATTTACTGAGAACTCTACCTACATTGGAAGGCACTGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm KAP

Protein Analysis

862

Amino Acids

94.4

Weight (kDa)

6.06

Isoelectric Point (pI)

43.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ARM_ARMC5	PF24768	144 - 249	4.1e-07	ARMC5
ARM_PUB	PF25598	183 - 322	1.2e-06	Plant U-box protein ARM repeat region
ARM_ARMC5	PF24768	669 - 854	5.7e-06	ARMC5

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010363)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G23180 AT1G23180
fragaria_vesca	FvH4_4g34070
malus_domestica	MD16G1022800.v1.1
prunus_persica	Prupe.1G330100_v2.0.a1 Prupe.1G330100_v2.0.a1 Prupe.1G330100_v2.0.a1 Prupe.1G330100_v2.0.a1
pyrus_communis	pycom16g02010
rosa_chinensis	RchiOBHm_Chr4g0443581
rosa_laevigata	RLG00000005913
rosa_multiflora	Rmu_sc0001118.1_g000017 Rmu_sc0026347.1_g000006
rosa_roxburghii	Rroxscaffold_5G00384130
rosa_samantha	Rh4AG403200 Rh4AG405100 Rh4BG416100 Rh4CG430600 Rh4DG410500 Rh4DG411700
rosa_wichuraiana	Rw4G034780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	993
AatII	GACGTC	1 cut(s)	744
Acc16I	TGCGCA	1 cut(s)	2504
Acc65I	GGTACC	1 cut(s)	967
AccB1I	GGYRCC	2 cut(s)	967, 1082
AccB7I	CCANNNNNTGG	1 cut(s)	1658
AccII	CGCG	1 cut(s)	139
AciI	CCGC	9 cut(s)	137, 196, 758, 761, 1375, 1603, 1826, 2076, 2276
AclWI	GGATC	6 cut(s)	877, 1523, 1555, 1607, 1613, 1669
AcsI	RAATTY	2 cut(s)	778, 794
AcuI	CTGAAG	5 cut(s)	56, 1536, 1866, 1968, 2343
AcyI	GRCGYC	1 cut(s)	741
AdeI	CACNNNGTG	1 cut(s)	410
AfaI	GTAC	4 cut(s)	646, 969, 1042, 2493
AfiI	CCNNNNNNNGG	5 cut(s)	308, 977, 1658, 1867, 1924
AflII	CTTAAG	1 cut(s)	850
AflIII	ACRYGT	2 cut(s)	1108, 1975
AhdI	GACNNNNNGTC	1 cut(s)	2192
AhlI	ACTAGT	2 cut(s)	218, 497
AjnI	CCWGG	4 cut(s)	1006, 1073, 1742, 1966
AjuI	GAANNNNNNNTTGG	2 cut(s)	890, 922
Alw26I	GTCTC	4 cut(s)	266, 1804, 2225, 2530
AlwI	GGATC	6 cut(s)	877, 1523, 1555, 1607, 1613, 1669
AlwNI	CAGNNNCTG	1 cut(s)	1183
Ama87I	CYCGRG	3 cut(s)	603, 1807, 2343
AoxI	GGCC	5 cut(s)	6, 1022, 1197, 1926, 2409
ApaI	GGGCCC	1 cut(s)	10
ApoI	RAATTY	2 cut(s)	778, 794
Asp718I	GGTACC	1 cut(s)	967
AspLEI	GCGC	3 cut(s)	141, 391, 2505
AsuC2I	CCSGG	2 cut(s)	592, 2023
AsuHPI	GGTGA	8 cut(s)	185, 199, 242, 276, 323, 637, 2077, 2170
AsuII	TTCGAA	1 cut(s)	1730
AvaI	CYCGRG	3 cut(s)	603, 1807, 2343
AvaII	GGWCC	5 cut(s)	299, 352, 1649, 1679, 2180
BaeGI	GKGCMC	2 cut(s)	10, 2545
BanI	GGYRCC	2 cut(s)	967, 1082
BanII	GRGCYC	3 cut(s)	10, 160, 1556
BauI	CACGAG	1 cut(s)	2228
BbsI	GAAGAC	3 cut(s)	136, 1317, 1941
BccI	CCATC	8 cut(s)	104, 221, 308, 440, 584, 1570, 1640, 1841
BceAI	ACGGC	5 cut(s)	694, 820, 2279, 2333, 2396
BciT130I	CCWGG	4 cut(s)	1008, 1075, 1744, 1968
BciVI	GTATCC	2 cut(s)	1585, 1864
BcnI	CCSGG	2 cut(s)	592, 2023
BcoDI	GTCTC	4 cut(s)	266, 1804, 2225, 2530
BcuI	ACTAGT	2 cut(s)	218, 497
BfaI	CTAG	9 cut(s)	219, 498, 536, 947, 1284, 1451, 1469, 1617, 2477
BfmI	CTRYAG	2 cut(s)	1335, 2355
BfoI	RGCGCY	1 cut(s)	392
BfrI	CTTAAG	1 cut(s)	850
BfuI	GTATCC	2 cut(s)	1585, 1864
Bme1390I	CCNGG	6 cut(s)	592, 1008, 1075, 1744, 1968, 2023
Bme18I	GGWCC	5 cut(s)	299, 352, 1649, 1679, 2180
BmeRI	GACNNNNNGTC	1 cut(s)	2192
BmeT110I	CYCGRG	3 cut(s)	603, 1807, 2343
BmiI	GGNNCC	8 cut(s)	8, 9, 574, 969, 1084, 1198, 1690, 2182
BmrFI	CCNGG	6 cut(s)	592, 1008, 1075, 1744, 1968, 2023
BmsI	GCATC	6 cut(s)	330, 418, 1342, 1364, 1429, 1657
BoxI	GACNNNNGTC	1 cut(s)	237
BpiI	GAAGAC	3 cut(s)	136, 1317, 1941
BplI	GAGNNNNNCTC	2 cut(s)	476, 508
BpmI	CTGGAG	1 cut(s)	2505
Bpu14I	TTCGAA	1 cut(s)	1730
BpuEI	CTTGAG	6 cut(s)	100, 158, 679, 1446, 1859, 2093
BpuMI	CCSGG	2 cut(s)	592, 2023
BsaBI	GATNNNNATC	1 cut(s)	927
BsaHI	GRCGYC	1 cut(s)	741
BsaI	GGTCTC	2 cut(s)	266, 2225
BsaJI	CCNNGG	7 cut(s)	726, 1099, 1265, 1587, 1742, 1743, 1967
BsaWI	WCCGGW	2 cut(s)	964, 1703
BsaXI	ACNNNNNCTCC	2 cut(s)	24, 54
Bsc4I	CCNNNNNNNGG	5 cut(s)	308, 977, 1658, 1867, 1924
Bse118I	RCCGGY	1 cut(s)	1997
Bse1I	ACTGG	4 cut(s)	720, 1246, 1652, 2495
Bse3DI	GCAATG	1 cut(s)	1495
Bse8I	GATNNNNATC	1 cut(s)	927
BseBI	CCWGG	4 cut(s)	1008, 1075, 1744, 1968
BseDI	CCNNGG	7 cut(s)	726, 1099, 1265, 1587, 1742, 1743, 1967
BseGI	GGATG	6 cut(s)	345, 736, 1216, 1672, 1833, 1912
BseJI	GATNNNNATC	1 cut(s)	927
BseLI	CCNNNNNNNGG	5 cut(s)	308, 977, 1658, 1867, 1924
BseMI	GCAATG	1 cut(s)	1495
BseMII	CTCAG	5 cut(s)	490, 612, 1080, 2435, 2546
BseNI	ACTGG	4 cut(s)	720, 1246, 1652, 2495
BseRI	GAGGAG	1 cut(s)	77
BseSI	GKGCMC	2 cut(s)	10, 2545
BseYI	CCCAGC	1 cut(s)	1394
BsgI	GTGCAG	2 cut(s)	1002, 1831
Bsh1236I	CGCG	1 cut(s)	139
Bsh1285I	CGRYCG	1 cut(s)	137
BshFI	GGCC	5 cut(s)	8, 1024, 1199, 1928, 2411
BshNI	GGYRCC	2 cut(s)	967, 1082
BsiEI	CGRYCG	1 cut(s)	137
BsiHKCI	CYCGRG	3 cut(s)	603, 1807, 2343
BsiSI	CCGG	5 cut(s)	591, 965, 1704, 1998, 2023
BslFI	GGGAC	2 cut(s)	77, 2166
BslI	CCNNNNNNNGG	5 cut(s)	308, 977, 1658, 1867, 1924
BsmAI	GTCTC	4 cut(s)	266, 1804, 2225, 2530
BsmBI	CGTCTC	1 cut(s)	2530
BsmFI	GGGAC	2 cut(s)	77, 2166
BsmI	GAATGC	3 cut(s)	904, 1156, 1382
BsnI	GGCC	5 cut(s)	8, 1024, 1199, 1928, 2411
Bso31I	GGTCTC	2 cut(s)	266, 2225
BsoBI	CYCGRG	3 cut(s)	603, 1807, 2343
Bsp119I	TTCGAA	1 cut(s)	1730
Bsp120I	GGGCCC	1 cut(s)	6
Bsp1286I	GDGCHC	4 cut(s)	10, 160, 1556, 2545
Bsp143I	GATC	8 cut(s)	479, 524, 869, 1528, 1560, 1605, 1612, 1661
Bsp19I	CCATGG	1 cut(s)	1265
BspACI	CCGC	9 cut(s)	137, 196, 758, 761, 1375, 1603, 1826, 2076, 2276
BspANI	GGCC	5 cut(s)	8, 1024, 1199, 1928, 2411
BspCNI	CTCAG	5 cut(s)	489, 613, 1081, 2436, 2547
BspFNI	CGCG	1 cut(s)	139
BspLI	GGNNCC	8 cut(s)	8, 9, 574, 969, 1084, 1198, 1690, 2182
BspMAI	CTGCAG	2 cut(s)	1339, 2359
BspPI	GGATC	6 cut(s)	877, 1523, 1555, 1607, 1613, 1669
BspT104I	TTCGAA	1 cut(s)	1730
BspT107I	GGYRCC	2 cut(s)	967, 1082
BspTI	CTTAAG	1 cut(s)	850
BspTNI	GGTCTC	2 cut(s)	266, 2225
BsrDI	GCAATG	1 cut(s)	1495
BsrFI	RCCGGY	1 cut(s)	1997
BsrI	ACTGG	4 cut(s)	720, 1246, 1652, 2495
BssAI	RCCGGY	1 cut(s)	1997
BssECI	CCNNGG	7 cut(s)	726, 1099, 1265, 1587, 1742, 1743, 1967
BssMI	GATC	8 cut(s)	479, 524, 869, 1528, 1560, 1605, 1612, 1661
BssNI	GRCGYC	1 cut(s)	741
BssSI	CACGAG	1 cut(s)	2228
BssT1I	CCWWGG	4 cut(s)	726, 1099, 1265, 1587
Bst2BI	CACGAG	1 cut(s)	2228
Bst2UI	CCWGG	4 cut(s)	1008, 1075, 1744, 1968
Bst4CI	ACNGT	9 cut(s)	698, 837, 1040, 1179, 1227, 1430, 1852, 2456, 2532
Bst6I	CTCTTC	1 cut(s)	576
BstACI	GRCGYC	1 cut(s)	741
BstAFI	CTTAAG	1 cut(s)	850
BstAPI	GCANNNNNTGC	1 cut(s)	899
BstBI	TTCGAA	1 cut(s)	1730
BstC8I	GCNNGC	3 cut(s)	378, 565, 636
BstDEI	CTNAG	7 cut(s)	476, 621, 1089, 1609, 2049, 2444, 2555
BstDSI	CCRYGG	1 cut(s)	1265
BstF5I	GGATG	6 cut(s)	345, 736, 1216, 1672, 1833, 1912
BstFNI	CGCG	1 cut(s)	139
BstH2I	RGCGCY	1 cut(s)	392
BstHHI	GCGC	3 cut(s)	141, 391, 2505
BstKTI	GATC	8 cut(s)	482, 527, 872, 1531, 1563, 1608, 1615, 1664
BstMAI	GTCTC	4 cut(s)	266, 1804, 2225, 2530
BstMBI	GATC	8 cut(s)	479, 524, 869, 1528, 1560, 1605, 1612, 1661
BstMCI	CGRYCG	1 cut(s)	137
BstNI	CCWGG	4 cut(s)	1008, 1075, 1744, 1968
BstNSI	RCATGY	3 cut(s)	1112, 1979, 2424
BstPAI	GACNNNNGTC	1 cut(s)	237
BstSCI	CCNGG	6 cut(s)	590, 1006, 1073, 1742, 1966, 2021
BstSFI	CTRYAG	2 cut(s)	1335, 2355
BstSLI	GKGCMC	2 cut(s)	10, 2545
BstUI	CGCG	1 cut(s)	139
BstV2I	GAAGAC	3 cut(s)	136, 1317, 1941
BstX2I	RGATCY	5 cut(s)	869, 1528, 1560, 1605, 1612
BstXI	CCANNNNNNTGG	2 cut(s)	1207, 2248
BstYI	RGATCY	5 cut(s)	869, 1528, 1560, 1605, 1612
BsuI	GTATCC	2 cut(s)	1585, 1864
BsuRI	GGCC	5 cut(s)	8, 1024, 1199, 1928, 2411
BtgI	CCRYGG	1 cut(s)	1265
BtsCI	GGATG	6 cut(s)	345, 736, 1216, 1672, 1833, 1912
BtsI	GCAGTG	2 cut(s)	574, 2580
BtsIMutI	CAGTG	6 cut(s)	32, 574, 703, 2461, 2537, 2580
Cac8I	GCNNGC	3 cut(s)	378, 565, 636
CaiI	CAGNNNCTG	1 cut(s)	1183
CfoI	GCGC	3 cut(s)	141, 391, 2505
Cfr10I	RCCGGY	1 cut(s)	1997
CseI	GACGC	2 cut(s)	242, 1177
CsiI	ACCWGGT	1 cut(s)	1006
Csp6I	GTAC	4 cut(s)	645, 968, 1041, 2492
CviQI	GTAC	4 cut(s)	645, 968, 1041, 2492
DdeI	CTNAG	7 cut(s)	476, 621, 1089, 1609, 2049, 2444, 2555
DpnI	GATC	8 cut(s)	481, 526, 871, 1530, 1562, 1607, 1614, 1663
DpnII	GATC	8 cut(s)	479, 524, 869, 1528, 1560, 1605, 1612, 1661
DraI	TTTAAA	1 cut(s)	1548
DraIII	CACNNNGTG	1 cut(s)	410
DriI	GACNNNNNGTC	1 cut(s)	2192
Eam1104I	CTCTTC	1 cut(s)	576
Eam1105I	GACNNNNNGTC	1 cut(s)	2192
EarI	CTCTTC	1 cut(s)	576
EciI	GGCGGA	2 cut(s)	1618, 2065
Eco130I	CCWWGG	4 cut(s)	726, 1099, 1265, 1587
Eco24I	GRGCYC	3 cut(s)	10, 160, 1556
Eco31I	GGTCTC	2 cut(s)	266, 2225
Eco32I	GATATC	2 cut(s)	703, 929
Eco47I	GGWCC	5 cut(s)	299, 352, 1649, 1679, 2180
Eco57I	CTGAAG	5 cut(s)	56, 1536, 1866, 1968, 2343
Eco88I	CYCGRG	3 cut(s)	603, 1807, 2343
EcoO109I	RGGNCCY	3 cut(s)	7, 1679, 1927
EcoRII	CCWGG	4 cut(s)	1006, 1073, 1742, 1966
EcoRV	GATATC	2 cut(s)	703, 929
EcoT14I	CCWWGG	4 cut(s)	726, 1099, 1265, 1587
EcoT22I	ATGCAT	1 cut(s)	1357
EcoT38I	GRGCYC	3 cut(s)	10, 160, 1556
ErhI	CCWWGG	4 cut(s)	726, 1099, 1265, 1587
Esp3I	CGTCTC	1 cut(s)	2530
FalI	AAGNNNNNCTT	4 cut(s)	1666, 1698, 1986, 2018
FaqI	GGGAC	2 cut(s)	77, 2166
FauI	CCCGC	1 cut(s)	754
FauNDI	CATATG	1 cut(s)	1371
FokI	GGATG	6 cut(s)	352, 743, 1223, 1679, 1820, 1919
FriOI	GRGCYC	3 cut(s)	10, 160, 1556
FspBI	CTAG	9 cut(s)	219, 498, 536, 947, 1284, 1451, 1469, 1617, 2477
FspI	TGCGCA	1 cut(s)	2504
GlaI	GCGC	3 cut(s)	140, 390, 2504
GsaI	CCCAGC	1 cut(s)	1398
GsuI	CTGGAG	1 cut(s)	2505
HaeII	RGCGCY	1 cut(s)	392
HaeIII	GGCC	5 cut(s)	8, 1024, 1199, 1928, 2411
HapII	CCGG	5 cut(s)	591, 965, 1704, 1998, 2023
HgaI	GACGC	2 cut(s)	242, 1177
HhaI	GCGC	3 cut(s)	141, 391, 2505
Hin1I	GRCGYC	1 cut(s)	741
Hin6I	GCGC	3 cut(s)	139, 389, 2503
HinP1I	GCGC	3 cut(s)	139, 389, 2503
HincII	GTYRAC	1 cut(s)	1247
HindII	GTYRAC	1 cut(s)	1247
HpaII	CCGG	5 cut(s)	591, 965, 1704, 1998, 2023
HphI	GGTGA	8 cut(s)	185, 199, 242, 276, 323, 637, 2077, 2170
Hpy166II	GTNNAC	3 cut(s)	1043, 1247, 1273
Hpy188III	TCNNGA	5 cut(s)	117, 365, 446, 1469, 1784
Hpy8I	GTNNAC	3 cut(s)	1043, 1247, 1273
Hpy99I	CGWCG	1 cut(s)	2417
HpyCH4III	ACNGT	9 cut(s)	698, 837, 1040, 1179, 1227, 1430, 1852, 2456, 2532
HpyCH4IV	ACGT	1 cut(s)	741
HpyF3I	CTNAG	7 cut(s)	476, 621, 1089, 1609, 2049, 2444, 2555
HpySE526I	ACGT	1 cut(s)	741
Hsp92I	GRCGYC	1 cut(s)	741
HspAI	GCGC	3 cut(s)	139, 389, 2503
KpnI	GGTACC	1 cut(s)	971
Kzo9I	GATC	8 cut(s)	479, 524, 869, 1528, 1560, 1605, 1612, 1661
LmnI	GCTCC	6 cut(s)	45, 572, 631, 1101, 2251, 2486
LweI	GCATC	6 cut(s)	330, 418, 1342, 1364, 1429, 1657
MabI	ACCWGGT	1 cut(s)	1006
MaeI	CTAG	9 cut(s)	219, 498, 536, 947, 1284, 1451, 1469, 1617, 2477
MaeII	ACGT	1 cut(s)	741
MaeIII	GTNAC	6 cut(s)	214, 221, 230, 711, 2025, 2218
MalI	GATC	8 cut(s)	481, 526, 871, 1530, 1562, 1607, 1614, 1663
MboI	GATC	8 cut(s)	479, 524, 869, 1528, 1560, 1605, 1612, 1661
MfeI	CAATTG	1 cut(s)	1344
MflI	RGATCY	5 cut(s)	869, 1528, 1560, 1605, 1612
MhlI	GDGCHC	4 cut(s)	10, 160, 1556, 2545
MlyI	GAGTC	7 cut(s)	222, 353, 494, 1325, 1349, 2039, 2238
MmeI	TCCRAC	4 cut(s)	82, 888, 1141, 1942
Mph1103I	ATGCAT	1 cut(s)	1357
MslI	CAYNNNNRTG	3 cut(s)	257, 1113, 1205
MspA1I	CMGCKG	1 cut(s)	986
MspCI	CTTAAG	1 cut(s)	850
MspI	CCGG	5 cut(s)	591, 965, 1704, 1998, 2023
MspR9I	CCNGG	6 cut(s)	592, 1008, 1075, 1744, 1968, 2023
MunI	CAATTG	1 cut(s)	1344
Mva1269I	GAATGC	3 cut(s)	904, 1156, 1382
MvaI	CCWGG	4 cut(s)	1008, 1075, 1744, 1968
MvnI	CGCG	1 cut(s)	139
NciI	CCSGG	2 cut(s)	592, 2023
NcoI	CCATGG	1 cut(s)	1265
NdeI	CATATG	1 cut(s)	1371
NdeII	GATC	8 cut(s)	479, 524, 869, 1528, 1560, 1605, 1612, 1661
NlaIV	GGNNCC	8 cut(s)	8, 9, 574, 969, 1084, 1198, 1690, 2182
NmuCI	GTSAC	3 cut(s)	214, 221, 230
NsbI	TGCGCA	1 cut(s)	2504
NsiI	ATGCAT	1 cut(s)	1357
NspI	RCATGY	3 cut(s)	1112, 1979, 2424
NspV	TTCGAA	1 cut(s)	1730
PaeR7I	CTCGAG	2 cut(s)	603, 2343
PasI	CCCWGGG	1 cut(s)	1743
PciI	ACATGT	2 cut(s)	1108, 1975
PctI	GAATGC	3 cut(s)	904, 1156, 1382
PfeI	GAWTC	7 cut(s)	463, 1297, 1760, 1895, 1943, 2072, 2336
PflFI	GACNNNGTC	1 cut(s)	1008
PflMI	CCANNNNNTGG	1 cut(s)	1658
PleI	GAGTC	7 cut(s)	221, 353, 493, 1324, 1348, 2039, 2238
PpsI	GAGTC	7 cut(s)	221, 353, 493, 1324, 1348, 2039, 2238
PpuMI	RGGWCCY	1 cut(s)	1679
PscI	ACATGT	2 cut(s)	1108, 1975
PshAI	GACNNNNGTC	1 cut(s)	237
PsiI	TTATAA	1 cut(s)	993
Psp5II	RGGWCCY	1 cut(s)	1679
Psp6I	CCWGG	4 cut(s)	1006, 1073, 1742, 1966
PspFI	CCCAGC	1 cut(s)	1394
PspGI	CCWGG	4 cut(s)	1006, 1073, 1742, 1966
PspN4I	GGNNCC	8 cut(s)	8, 9, 574, 969, 1084, 1198, 1690, 2182
PspOMI	GGGCCC	1 cut(s)	6
PspPPI	RGGWCCY	1 cut(s)	1679
PspXI	VCTCGAGB	2 cut(s)	603, 2343
PsrI	GAACNNNNNNTAC	2 cut(s)	2551, 2583
PstI	CTGCAG	2 cut(s)	1339, 2359
PstNI	CAGNNNCTG	1 cut(s)	1183
PsuI	RGATCY	5 cut(s)	869, 1528, 1560, 1605, 1612
PsyI	GACNNNGTC	1 cut(s)	1008
PvuII	CAGCTG	1 cut(s)	986
RsaI	GTAC	4 cut(s)	646, 969, 1042, 2493
RsaNI	GTAC	4 cut(s)	645, 968, 1041, 2492
RseI	CAYNNNNRTG	3 cut(s)	257, 1113, 1205
Sau3AI	GATC	8 cut(s)	479, 524, 869, 1528, 1560, 1605, 1612, 1661
SchI	GAGTC	7 cut(s)	222, 353, 494, 1325, 1349, 2039, 2238
ScrFI	CCNGG	6 cut(s)	592, 1008, 1075, 1744, 1968, 2023
SduI	GDGCHC	4 cut(s)	10, 160, 1556, 2545
SexAI	ACCWGGT	1 cut(s)	1006
SfaNI	GCATC	6 cut(s)	330, 418, 1342, 1364, 1429, 1657
SfcI	CTRYAG	2 cut(s)	1335, 2355
Sfr274I	CTCGAG	2 cut(s)	603, 2343
SfuI	TTCGAA	1 cut(s)	1730
SinI	GGWCC	5 cut(s)	299, 352, 1649, 1679, 2180
SlaI	CTCGAG	2 cut(s)	603, 2343
SmiMI	CAYNNNNRTG	3 cut(s)	257, 1113, 1205
SmlI	CTYRAG	9 cut(s)	115, 173, 603, 658, 850, 1461, 1838, 2108, 2343
SmoI	CTYRAG	9 cut(s)	115, 173, 603, 658, 850, 1461, 1838, 2108, 2343
SpeI	ACTAGT	2 cut(s)	218, 497
SsiI	CCGC	9 cut(s)	137, 196, 758, 761, 1375, 1603, 1826, 2076, 2276
SspI	AATATT	4 cut(s)	401, 1543, 1572, 2370
SspMI	CTAG	9 cut(s)	219, 498, 536, 947, 1284, 1451, 1469, 1617, 2477
StyD4I	CCNGG	6 cut(s)	590, 1006, 1073, 1742, 1966, 2021
StyI	CCWWGG	4 cut(s)	726, 1099, 1265, 1587
TaaI	ACNGT	9 cut(s)	698, 837, 1040, 1179, 1227, 1430, 1852, 2456, 2532
TaiI	ACGT	1 cut(s)	744
TaqI	TCGA	8 cut(s)	154, 579, 604, 1730, 2043, 2196, 2344, 2415
TatI	WGTACW	1 cut(s)	644
TauI	GCSGC	2 cut(s)	761, 1829
TfiI	GAWTC	7 cut(s)	463, 1297, 1760, 1895, 1943, 2072, 2336
TscAI	CASTG	6 cut(s)	39, 574, 703, 2461, 2537, 2587
TseFI	GTSAC	3 cut(s)	214, 221, 230
Tsp45I	GTSAC	3 cut(s)	214, 221, 230
TspDTI	ATGAA	8 cut(s)	534, 698, 1008, 1163, 1230, 1380, 1643, 2537
TspGWI	ACGGA	1 cut(s)	1180
TspRI	CASTG	6 cut(s)	39, 574, 703, 2461, 2537, 2587
Tth111I	GACNNNGTC	1 cut(s)	1008
Van91I	CCANNNNNTGG	1 cut(s)	1658
Vha464I	CTTAAG	1 cut(s)	850
VpaK11BI	GGWCC	5 cut(s)	299, 352, 1649, 1679, 2180
XapI	RAATTY	2 cut(s)	778, 794
XbaI	TCTAGA	1 cut(s)	1468
XceI	RCATGY	3 cut(s)	1112, 1979, 2424
XhoI	CTCGAG	2 cut(s)	603, 2343
XspI	CTAG	9 cut(s)	219, 498, 536, 947, 1284, 1451, 1469, 1617, 2477
ZraI	GACGTC	1 cut(s)	742
Zsp2I	ATGCAT	1 cut(s)	1357

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.