Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G08530 |
| fragaria_vesca | FvH4_4g24110 FvH4_4g24110 FvH4_4g24110 |
| malus_domestica | MD13G1115400.v1.1 MD16G1115300.v1.1 |
| prunus_persica | Prupe.1G231900_v2.0.a1 Prupe.1G231900_v2.0.a1 |
| pyrus_communis | pycom13g09990 pycom16g09780 |
| rosa_chinensis | RchiOBHm_Chr4g0430891 |
| rosa_laevigata | RLG00000006941 |
| rosa_multiflora | Rmu_sc0006263.1_g000009 |
| rosa_roxburghii | Rroxscaffold_5G00372580 |
| rosa_rugosa | Rorug04G0247100 Rorug04G0247200 |
| rosa_samantha | Rh4AG302600 Rh4AG303500 Rh4BG310700 Rh4CG327100 Rh4DG306900 |
| rosa_wichuraiana | Rw4G026300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 252 |
| AccB1I | GGYRCC | 4 cut(s) | 4, 230, 252, 671 |
| AccI | GTMKAC | 1 cut(s) | 19 |
| AciI | CCGC | 2 cut(s) | 137, 993 |
| AclWI | GGATC | 2 cut(s) | 637, 1421 |
| AcoI | YGGCCR | 1 cut(s) | 388 |
| AcuI | CTGAAG | 2 cut(s) | 1112, 1286 |
| AdeI | CACNNNGTG | 1 cut(s) | 1218 |
| AfaI | GTAC | 1 cut(s) | 254 |
| AfeI | AGCGCT | 1 cut(s) | 699 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 14, 831, 861, 1373 |
| AflIII | ACRYGT | 1 cut(s) | 907 |
| AgsI | TTSAA | 5 cut(s) | 172, 716, 742, 932, 955 |
| AjiI | CACGTC | 1 cut(s) | 329 |
| AjnI | CCWGG | 2 cut(s) | 430, 1021 |
| AleI | CACNNNNGTG | 1 cut(s) | 663 |
| AluBI | AGCT | 9 cut(s) | 41, 47, 581, 593, 602, 1124, 1282, 1402, 1451 |
| AluI | AGCT | 9 cut(s) | 41, 47, 581, 593, 602, 1124, 1282, 1402, 1451 |
| Alw21I | GWGCWC | 1 cut(s) | 1214 |
| Alw26I | GTCTC | 1 cut(s) | 359 |
| Alw44I | GTGCAC | 1 cut(s) | 1210 |
| AlwI | GGATC | 2 cut(s) | 637, 1421 |
| Ama87I | CYCGRG | 2 cut(s) | 146, 901 |
| Aor51HI | AGCGCT | 1 cut(s) | 699 |
| AoxI | GGCC | 6 cut(s) | 70, 316, 388, 516, 1364, 1394 |
| ApaLI | GTGCAC | 1 cut(s) | 1210 |
| ApeKI | GCWGC | 9 cut(s) | 38, 104, 524, 599, 1121, 1355, 1358, 1448, 1451 |
| Asp718I | GGTACC | 1 cut(s) | 252 |
| AspLEI | GCGC | 2 cut(s) | 462, 700 |
| AspS9I | GGNCC | 4 cut(s) | 70, 516, 839, 1365 |
| AsuHPI | GGTGA | 5 cut(s) | 257, 557, 698, 1321, 1361 |
| AvaI | CYCGRG | 2 cut(s) | 146, 901 |
| AvaII | GGWCC | 1 cut(s) | 839 |
| BaeGI | GKGCMC | 2 cut(s) | 1214, 1332 |
| BanI | GGYRCC | 4 cut(s) | 4, 230, 252, 671 |
| BbsI | GAAGAC | 1 cut(s) | 186 |
| Bbv12I | GWGCWC | 1 cut(s) | 1214 |
| BbvI | GCAGC | 8 cut(s) | 50, 116, 511, 611, 1133, 1342, 1345, 1438 |
| BccI | CCATC | 7 cut(s) | 17, 355, 380, 990, 1069, 1129, 1230 |
| BceAI | ACGGC | 1 cut(s) | 375 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1148, 1182 |
| BciT130I | CCWGG | 2 cut(s) | 432, 1023 |
| BciVI | GTATCC | 1 cut(s) | 391 |
| BclI | TGATCA | 1 cut(s) | 1248 |
| BcoDI | GTCTC | 1 cut(s) | 359 |
| BfaI | CTAG | 4 cut(s) | 74, 269, 582, 965 |
| BfmI | CTRYAG | 2 cut(s) | 29, 1119 |
| BfoI | RGCGCY | 1 cut(s) | 701 |
| BfuI | GTATCC | 1 cut(s) | 391 |
| BglII | AGATCT | 1 cut(s) | 265 |
| BisI | GCNGC | 9 cut(s) | 39, 105, 525, 600, 1122, 1356, 1359, 1449, 1452 |
| BlsI | GCNGC | 9 cut(s) | 40, 106, 526, 601, 1123, 1357, 1360, 1450, 1453 |
| Bme1390I | CCNGG | 2 cut(s) | 432, 1023 |
| Bme18I | GGWCC | 1 cut(s) | 839 |
| BmeT110I | CYCGRG | 2 cut(s) | 146, 901 |
| BmgBI | CACGTC | 1 cut(s) | 329 |
| BmgT120I | GGNCC | 4 cut(s) | 70, 516, 839, 1365 |
| BmiI | GGNNCC | 6 cut(s) | 6, 71, 232, 254, 436, 673 |
| BmrFI | CCNGG | 2 cut(s) | 432, 1023 |
| BmrI | ACTGGG | 1 cut(s) | 620 |
| BmsI | GCATC | 3 cut(s) | 1075, 1150, 1342 |
| BmuI | ACTGGG | 1 cut(s) | 620 |
| BpiI | GAAGAC | 1 cut(s) | 186 |
| BpmI | CTGGAG | 1 cut(s) | 725 |
| BpuEI | CTTGAG | 2 cut(s) | 209, 1424 |
| BsaAI | YACGTR | 1 cut(s) | 323 |
| BsaI | GGTCTC | 1 cut(s) | 359 |
| BsaJI | CCNNGG | 1 cut(s) | 1050 |
| BsaWI | WCCGGW | 1 cut(s) | 183 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 14, 831, 861, 1373 |
| Bse1I | ACTGG | 4 cut(s) | 254, 519, 615, 855 |
| Bse3DI | GCAATG | 2 cut(s) | 1040, 1069 |
| BseBI | CCWGG | 2 cut(s) | 432, 1023 |
| BseDI | CCNNGG | 1 cut(s) | 1050 |
| BseGI | GGATG | 4 cut(s) | 516, 1001, 1241, 1251 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 14, 831, 861, 1373 |
| BseMI | GCAATG | 2 cut(s) | 1040, 1069 |
| BseMII | CTCAG | 1 cut(s) | 110 |
| BseNI | ACTGG | 4 cut(s) | 254, 519, 615, 855 |
| BseRI | GAGGAG | 1 cut(s) | 1423 |
| BseSI | GKGCMC | 2 cut(s) | 1214, 1332 |
| BseXI | GCAGC | 8 cut(s) | 50, 116, 511, 611, 1133, 1342, 1345, 1438 |
| BsgI | GTGCAG | 2 cut(s) | 1121, 1446 |
| BshFI | GGCC | 6 cut(s) | 72, 318, 390, 518, 1366, 1396 |
| BshNI | GGYRCC | 4 cut(s) | 4, 230, 252, 671 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1214 |
| BsiHKCI | CYCGRG | 2 cut(s) | 146, 901 |
| BsiSI | CCGG | 1 cut(s) | 184 |
| BslFI | GGGAC | 5 cut(s) | 765, 895, 918, 1013, 1243 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 14, 831, 861, 1373 |
| BsmAI | GTCTC | 1 cut(s) | 359 |
| BsmFI | GGGAC | 5 cut(s) | 765, 895, 918, 1013, 1243 |
| BsnI | GGCC | 6 cut(s) | 72, 318, 390, 518, 1366, 1396 |
| Bso31I | GGTCTC | 1 cut(s) | 359 |
| BsoBI | CYCGRG | 2 cut(s) | 146, 901 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1214, 1332 |
| Bsp143I | GATC | 5 cut(s) | 83, 265, 629, 1248, 1413 |
| BspACI | CCGC | 2 cut(s) | 137, 993 |
| BspANI | GGCC | 6 cut(s) | 72, 318, 390, 518, 1366, 1396 |
| BspCNI | CTCAG | 1 cut(s) | 109 |
| BspLI | GGNNCC | 6 cut(s) | 6, 71, 232, 254, 436, 673 |
| BspMAI | CTGCAG | 2 cut(s) | 33, 1123 |
| BspPI | GGATC | 2 cut(s) | 637, 1421 |
| BspT107I | GGYRCC | 4 cut(s) | 4, 230, 252, 671 |
| BspTNI | GGTCTC | 1 cut(s) | 359 |
| BsrDI | GCAATG | 2 cut(s) | 1040, 1069 |
| BsrI | ACTGG | 4 cut(s) | 254, 519, 615, 855 |
| BssECI | CCNNGG | 1 cut(s) | 1050 |
| BssMI | GATC | 5 cut(s) | 83, 265, 629, 1248, 1413 |
| BssNAI | GTATAC | 1 cut(s) | 20 |
| BssT1I | CCWWGG | 1 cut(s) | 1050 |
| Bst1107I | GTATAC | 1 cut(s) | 20 |
| Bst2UI | CCWGG | 2 cut(s) | 432, 1023 |
| Bst4CI | ACNGT | 6 cut(s) | 564, 790, 808, 928, 977, 1218 |
| Bst6I | CTCTTC | 2 cut(s) | 927, 1281 |
| BstBAI | YACGTR | 1 cut(s) | 323 |
| BstC8I | GCNNGC | 1 cut(s) | 1425 |
| BstDEI | CTNAG | 1 cut(s) | 96 |
| BstEII | GGTNACC | 1 cut(s) | 1309 |
| BstF5I | GGATG | 4 cut(s) | 516, 1001, 1241, 1251 |
| BstH2I | RGCGCY | 1 cut(s) | 701 |
| BstHHI | GCGC | 2 cut(s) | 462, 700 |
| BstKTI | GATC | 5 cut(s) | 86, 268, 632, 1251, 1416 |
| BstMAI | GTCTC | 1 cut(s) | 359 |
| BstMBI | GATC | 5 cut(s) | 83, 265, 629, 1248, 1413 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 44, 524, 599, 1094, 1393 |
| BstNI | CCWGG | 2 cut(s) | 432, 1023 |
| BstNSI | RCATGY | 2 cut(s) | 911, 1300 |
| BstPI | GGTNACC | 1 cut(s) | 1309 |
| BstSCI | CCNGG | 2 cut(s) | 430, 1021 |
| BstSFI | CTRYAG | 2 cut(s) | 29, 1119 |
| BstSLI | GKGCMC | 2 cut(s) | 1214, 1332 |
| BstV1I | GCAGC | 8 cut(s) | 50, 116, 511, 611, 1133, 1342, 1345, 1438 |
| BstV2I | GAAGAC | 1 cut(s) | 186 |
| BstX2I | RGATCY | 2 cut(s) | 265, 629 |
| BstYI | RGATCY | 2 cut(s) | 265, 629 |
| BstZ17I | GTATAC | 1 cut(s) | 20 |
| BsuI | GTATCC | 1 cut(s) | 391 |
| BsuRI | GGCC | 6 cut(s) | 72, 318, 390, 518, 1366, 1396 |
| BtrI | CACGTC | 1 cut(s) | 329 |
| BtsCI | GGATG | 4 cut(s) | 516, 1001, 1241, 1251 |
| BtsI | GCAGTG | 1 cut(s) | 1214 |
| BtsIMutI | CAGTG | 6 cut(s) | 526, 786, 924, 973, 1088, 1214 |
| Cac8I | GCNNGC | 1 cut(s) | 1425 |
| CfoI | GCGC | 2 cut(s) | 462, 700 |
| Cfr13I | GGNCC | 4 cut(s) | 70, 516, 839, 1365 |
| Csp6I | GTAC | 1 cut(s) | 253 |
| CviAII | CATG | 7 cut(s) | 56, 235, 464, 908, 1193, 1252, 1297 |
| CviQI | GTAC | 1 cut(s) | 253 |
| DdeI | CTNAG | 1 cut(s) | 96 |
| DpnI | GATC | 5 cut(s) | 85, 267, 631, 1250, 1415 |
| DpnII | GATC | 5 cut(s) | 83, 265, 629, 1248, 1413 |
| DraIII | CACNNNGTG | 1 cut(s) | 1218 |
| EaeI | YGGCCR | 1 cut(s) | 388 |
| Eam1104I | CTCTTC | 2 cut(s) | 927, 1281 |
| EarI | CTCTTC | 2 cut(s) | 927, 1281 |
| EciI | GGCGGA | 2 cut(s) | 126, 1008 |
| Eco130I | CCWWGG | 1 cut(s) | 1050 |
| Eco31I | GGTCTC | 1 cut(s) | 359 |
| Eco47I | GGWCC | 1 cut(s) | 839 |
| Eco47III | AGCGCT | 1 cut(s) | 699 |
| Eco57I | CTGAAG | 2 cut(s) | 1112, 1286 |
| Eco88I | CYCGRG | 2 cut(s) | 146, 901 |
| Eco91I | GGTNACC | 1 cut(s) | 1309 |
| EcoO109I | RGGNCCY | 1 cut(s) | 70 |
| EcoO65I | GGTNACC | 1 cut(s) | 1309 |
| EcoRII | CCWGG | 2 cut(s) | 430, 1021 |
| EcoT14I | CCWWGG | 1 cut(s) | 1050 |
| ErhI | CCWWGG | 1 cut(s) | 1050 |
| FaeI | CATG | 7 cut(s) | 59, 238, 467, 911, 1196, 1255, 1300 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1162, 1194 |
| FaqI | GGGAC | 5 cut(s) | 765, 895, 918, 1013, 1243 |
| FatI | CATG | 7 cut(s) | 55, 234, 463, 907, 1192, 1251, 1296 |
| FbaI | TGATCA | 1 cut(s) | 1248 |
| FblI | GTMKAC | 1 cut(s) | 19 |
| Fnu4HI | GCNGC | 9 cut(s) | 39, 105, 525, 600, 1122, 1356, 1359, 1449, 1452 |
| FokI | GGATG | 4 cut(s) | 523, 1008, 1248, 1258 |
| Fsp4HI | GCNGC | 9 cut(s) | 39, 105, 525, 600, 1122, 1356, 1359, 1449, 1452 |
| FspBI | CTAG | 4 cut(s) | 74, 269, 582, 965 |
| GlaI | GCGC | 2 cut(s) | 461, 699 |
| GluI | GCNGC | 9 cut(s) | 39, 105, 525, 600, 1122, 1356, 1359, 1449, 1452 |
| GsuI | CTGGAG | 1 cut(s) | 725 |
| HaeII | RGCGCY | 1 cut(s) | 701 |
| HaeIII | GGCC | 6 cut(s) | 72, 318, 390, 518, 1366, 1396 |
| HapII | CCGG | 1 cut(s) | 184 |
| HhaI | GCGC | 2 cut(s) | 462, 700 |
| Hin1II | CATG | 7 cut(s) | 59, 238, 467, 911, 1196, 1255, 1300 |
| Hin6I | GCGC | 2 cut(s) | 460, 698 |
| HinP1I | GCGC | 2 cut(s) | 460, 698 |
| HindIII | AAGCTT | 1 cut(s) | 591 |
| HpaII | CCGG | 1 cut(s) | 184 |
| HphI | GGTGA | 5 cut(s) | 257, 557, 698, 1321, 1361 |
| Hpy166II | GTNNAC | 6 cut(s) | 20, 326, 428, 839, 913, 1212 |
| Hpy188I | TCNGA | 1 cut(s) | 385 |
| Hpy188III | TCNNGA | 5 cut(s) | 146, 704, 903, 1107, 1304 |
| Hpy8I | GTNNAC | 6 cut(s) | 20, 326, 428, 839, 913, 1212 |
| HpyAV | CCTTC | 4 cut(s) | 405, 479, 710, 1087 |
| HpyCH4III | ACNGT | 6 cut(s) | 564, 790, 808, 928, 977, 1218 |
| HpyCH4IV | ACGT | 2 cut(s) | 322, 328 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 44, 524, 599, 1094, 1393 |
| HpyF3I | CTNAG | 1 cut(s) | 96 |
| HpySE526I | ACGT | 2 cut(s) | 322, 328 |
| Hsp92II | CATG | 7 cut(s) | 59, 238, 467, 911, 1196, 1255, 1300 |
| HspAI | GCGC | 2 cut(s) | 460, 698 |
| KpnI | GGTACC | 1 cut(s) | 256 |
| Ksp22I | TGATCA | 1 cut(s) | 1248 |
| Kzo9I | GATC | 5 cut(s) | 83, 265, 629, 1248, 1413 |
| LmnI | GCTCC | 2 cut(s) | 101, 1420 |
| Lsp1109I | GCAGC | 8 cut(s) | 50, 116, 511, 611, 1133, 1342, 1345, 1438 |
| LweI | GCATC | 3 cut(s) | 1075, 1150, 1342 |
| MaeI | CTAG | 4 cut(s) | 74, 269, 582, 965 |
| MaeII | ACGT | 2 cut(s) | 322, 328 |
| MaeIII | GTNAC | 4 cut(s) | 245, 790, 960, 1309 |
| MalI | GATC | 5 cut(s) | 85, 267, 631, 1250, 1415 |
| MboI | GATC | 5 cut(s) | 83, 265, 629, 1248, 1413 |
| MboII | GAAGA | 5 cut(s) | 191, 319, 701, 944, 1298 |
| MfeI | CAATTG | 1 cut(s) | 1164 |
| MflI | RGATCY | 2 cut(s) | 265, 629 |
| MhlI | GDGCHC | 2 cut(s) | 1214, 1332 |
| MluCI | AATT | 5 cut(s) | 453, 874, 887, 1017, 1164 |
| MseI | TTAA | 4 cut(s) | 276, 566, 830, 1456 |
| MslI | CAYNNNNRTG | 3 cut(s) | 57, 162, 663 |
| MspA1I | CMGCKG | 3 cut(s) | 602, 1124, 1451 |
| MspI | CCGG | 1 cut(s) | 184 |
| MspR9I | CCNGG | 2 cut(s) | 432, 1023 |
| MunI | CAATTG | 1 cut(s) | 1164 |
| MvaI | CCWGG | 2 cut(s) | 432, 1023 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 44, 524, 599, 1094, 1393 |
| NdeII | GATC | 5 cut(s) | 83, 265, 629, 1248, 1413 |
| NlaIII | CATG | 7 cut(s) | 59, 238, 467, 911, 1196, 1255, 1300 |
| NlaIV | GGNNCC | 6 cut(s) | 6, 71, 232, 254, 436, 673 |
| NmuCI | GTSAC | 2 cut(s) | 245, 1309 |
| NspI | RCATGY | 2 cut(s) | 911, 1300 |
| OliI | CACNNNNGTG | 1 cut(s) | 663 |
| PciI | ACATGT | 1 cut(s) | 907 |
| PflFI | GACNNNGTC | 1 cut(s) | 1154 |
| PkrI | GCNGC | 9 cut(s) | 40, 106, 526, 601, 1123, 1357, 1360, 1450, 1453 |
| Ppu21I | YACGTR | 1 cut(s) | 323 |
| PscI | ACATGT | 1 cut(s) | 907 |
| Psp6I | CCWGG | 2 cut(s) | 430, 1021 |
| PspEI | GGTNACC | 1 cut(s) | 1309 |
| PspGI | CCWGG | 2 cut(s) | 430, 1021 |
| PspN4I | GGNNCC | 6 cut(s) | 6, 71, 232, 254, 436, 673 |
| PspPI | GGNCC | 4 cut(s) | 70, 516, 839, 1365 |
| PstI | CTGCAG | 2 cut(s) | 33, 1123 |
| PsuI | RGATCY | 2 cut(s) | 265, 629 |
| PsyI | GACNNNGTC | 1 cut(s) | 1154 |
| PvuII | CAGCTG | 3 cut(s) | 602, 1124, 1451 |
| RsaI | GTAC | 1 cut(s) | 254 |
| RsaNI | GTAC | 1 cut(s) | 253 |
| RseI | CAYNNNNRTG | 3 cut(s) | 57, 162, 663 |
| SaqAI | TTAA | 4 cut(s) | 276, 566, 830, 1456 |
| SatI | GCNGC | 9 cut(s) | 39, 105, 525, 600, 1122, 1356, 1359, 1449, 1452 |
| Sau3AI | GATC | 5 cut(s) | 83, 265, 629, 1248, 1413 |
| Sau96I | GGNCC | 4 cut(s) | 70, 516, 839, 1365 |
| ScrFI | CCNGG | 2 cut(s) | 432, 1023 |
| SduI | GDGCHC | 2 cut(s) | 1214, 1332 |
| SfaNI | GCATC | 3 cut(s) | 1075, 1150, 1342 |
| SfcI | CTRYAG | 2 cut(s) | 29, 1119 |
| SinI | GGWCC | 1 cut(s) | 839 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 57, 162, 663 |
| SmlI | CTYRAG | 2 cut(s) | 224, 1403 |
| SmoI | CTYRAG | 2 cut(s) | 224, 1403 |
| Sse9I | AATT | 5 cut(s) | 453, 874, 887, 1017, 1164 |
| SsiI | CCGC | 2 cut(s) | 137, 993 |
| SspMI | CTAG | 4 cut(s) | 74, 269, 582, 965 |
| StyD4I | CCNGG | 2 cut(s) | 430, 1021 |
| StyI | CCWWGG | 1 cut(s) | 1050 |
| TaaI | ACNGT | 6 cut(s) | 564, 790, 808, 928, 977, 1218 |
| TaiI | ACGT | 2 cut(s) | 325, 331 |
| TaqI | TCGA | 1 cut(s) | 1158 |
| TasI | AATT | 5 cut(s) | 453, 874, 887, 1017, 1164 |
| Tru1I | TTAA | 4 cut(s) | 276, 566, 830, 1456 |
| Tru9I | TTAA | 4 cut(s) | 276, 566, 830, 1456 |
| TscAI | CASTG | 6 cut(s) | 526, 793, 931, 980, 1095, 1214 |
| TseFI | GTSAC | 2 cut(s) | 245, 1309 |
| TseI | GCWGC | 9 cut(s) | 38, 104, 524, 599, 1121, 1355, 1358, 1448, 1451 |
| Tsp45I | GTSAC | 2 cut(s) | 245, 1309 |
| TspGWI | ACGGA | 1 cut(s) | 1163 |
| TspRI | CASTG | 6 cut(s) | 526, 793, 931, 980, 1095, 1214 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1154 |
| VneI | GTGCAC | 1 cut(s) | 1210 |
| VpaK11BI | GGWCC | 1 cut(s) | 839 |
| XceI | RCATGY | 2 cut(s) | 911, 1300 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 665 |
| XmiI | GTMKAC | 1 cut(s) | 19 |
| XspI | CTAG | 4 cut(s) | 74, 269, 582, 965 |