Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G08530 |
| fragaria_vesca | FvH4_4g24110 FvH4_4g24110 FvH4_4g24110 |
| malus_domestica | MD13G1115400.v1.1 MD16G1115300.v1.1 |
| prunus_persica | Prupe.1G231900_v2.0.a1 Prupe.1G231900_v2.0.a1 |
| pyrus_communis | pycom13g09990 pycom16g09780 |
| rosa_chinensis | RchiOBHm_Chr4g0430891 |
| rosa_laevigata | RLG00000006941 |
| rosa_multiflora | Rmu_sc0006263.1_g000009 |
| rosa_roxburghii | Rroxscaffold_5G00372580 |
| rosa_rugosa | Rorug04G0247100 Rorug04G0247200 |
| rosa_samantha | Rh4AG302600 Rh4AG303500 Rh4BG310700 Rh4CG327100 Rh4DG306900 |
| rosa_wichuraiana | Rw4G026300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 30 |
| Acc65I | GGTACC | 1 cut(s) | 279 |
| AccB1I | GGYRCC | 2 cut(s) | 257, 279 |
| AccI | GTMKAC | 1 cut(s) | 43 |
| AclWI | GGATC | 2 cut(s) | 664, 1448 |
| AcoI | YGGCCR | 1 cut(s) | 415 |
| AcsI | RAATTY | 1 cut(s) | 213 |
| AcuI | CTGAAG | 2 cut(s) | 1139, 1313 |
| AfaI | GTAC | 1 cut(s) | 281 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 604, 858, 888, 1400 |
| AflIII | ACRYGT | 1 cut(s) | 934 |
| AgsI | TTSAA | 5 cut(s) | 199, 743, 769, 959, 982 |
| AjiI | CACGTC | 1 cut(s) | 356 |
| AjnI | CCWGG | 2 cut(s) | 457, 1048 |
| AleI | CACNNNNGTG | 1 cut(s) | 690 |
| Alw21I | GWGCWC | 1 cut(s) | 1241 |
| Alw44I | GTGCAC | 1 cut(s) | 1237 |
| AlwI | GGATC | 2 cut(s) | 664, 1448 |
| AoxI | GGCC | 7 cut(s) | 94, 343, 379, 415, 606, 1391, 1421 |
| ApaLI | GTGCAC | 1 cut(s) | 1237 |
| ApeKI | GCWGC | 9 cut(s) | 62, 128, 551, 626, 804, 1148, 1382, 1385, 1475 |
| ApoI | RAATTY | 1 cut(s) | 213 |
| Asp718I | GGTACC | 1 cut(s) | 279 |
| AspA2I | CCTAGG | 1 cut(s) | 97 |
| AspLEI | GCGC | 1 cut(s) | 489 |
| AspS9I | GGNCC | 2 cut(s) | 94, 866 |
| AsuHPI | GGTGA | 6 cut(s) | 211, 284, 584, 725, 1348, 1388 |
| AvaII | GGWCC | 1 cut(s) | 866 |
| AvrII | CCTAGG | 1 cut(s) | 97 |
| BaeGI | GKGCMC | 2 cut(s) | 1241, 1359 |
| BanI | GGYRCC | 2 cut(s) | 257, 279 |
| BbsI | GAAGAC | 1 cut(s) | 213 |
| Bbv12I | GWGCWC | 1 cut(s) | 1241 |
| BbvI | GCAGC | 8 cut(s) | 74, 140, 538, 638, 791, 1160, 1369, 1372 |
| BccI | CCATC | 6 cut(s) | 382, 407, 1017, 1096, 1156, 1257 |
| BceAI | ACGGC | 1 cut(s) | 402 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1175, 1209 |
| BciT130I | CCWGG | 2 cut(s) | 459, 1050 |
| BclI | TGATCA | 1 cut(s) | 1275 |
| BfaI | CTAG | 5 cut(s) | 98, 296, 546, 731, 992 |
| BfmI | CTRYAG | 2 cut(s) | 53, 1146 |
| BglII | AGATCT | 1 cut(s) | 292 |
| BisI | GCNGC | 9 cut(s) | 63, 129, 552, 627, 805, 1149, 1383, 1386, 1476 |
| BlnI | CCTAGG | 1 cut(s) | 97 |
| BlsI | GCNGC | 9 cut(s) | 64, 130, 553, 628, 806, 1150, 1384, 1387, 1477 |
| Bme1390I | CCNGG | 2 cut(s) | 459, 1050 |
| Bme18I | GGWCC | 1 cut(s) | 866 |
| BmgBI | CACGTC | 1 cut(s) | 356 |
| BmgT120I | GGNCC | 2 cut(s) | 94, 866 |
| BmiI | GGNNCC | 4 cut(s) | 95, 259, 281, 463 |
| BmrFI | CCNGG | 2 cut(s) | 459, 1050 |
| BmrI | ACTGGG | 1 cut(s) | 647 |
| BmsI | GCATC | 3 cut(s) | 1102, 1177, 1369 |
| BmuI | ACTGGG | 1 cut(s) | 647 |
| BpiI | GAAGAC | 1 cut(s) | 213 |
| BpuEI | CTTGAG | 1 cut(s) | 1451 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1277 |
| BsaJI | CCNNGG | 3 cut(s) | 97, 349, 1077 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 604, 858, 888, 1400 |
| Bse1I | ACTGG | 4 cut(s) | 281, 642, 882, 1129 |
| Bse3DI | GCAATG | 1 cut(s) | 1067 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1277 |
| BseBI | CCWGG | 2 cut(s) | 459, 1050 |
| BseDI | CCNNGG | 3 cut(s) | 97, 349, 1077 |
| BseGI | GGATG | 5 cut(s) | 543, 1028, 1058, 1268, 1278 |
| BseJI | GATNNNNATC | 1 cut(s) | 1277 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 604, 858, 888, 1400 |
| BseMI | GCAATG | 1 cut(s) | 1067 |
| BseMII | CTCAG | 2 cut(s) | 134, 1446 |
| BseNI | ACTGG | 4 cut(s) | 281, 642, 882, 1129 |
| BseRI | GAGGAG | 3 cut(s) | 135, 977, 1450 |
| BseSI | GKGCMC | 2 cut(s) | 1241, 1359 |
| BseXI | GCAGC | 8 cut(s) | 74, 140, 538, 638, 791, 1160, 1369, 1372 |
| BseYI | CCCAGC | 1 cut(s) | 695 |
| BsgI | GTGCAG | 1 cut(s) | 147 |
| BshFI | GGCC | 7 cut(s) | 96, 345, 381, 417, 608, 1393, 1423 |
| BshNI | GGYRCC | 2 cut(s) | 257, 279 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1241 |
| BslFI | GGGAC | 4 cut(s) | 922, 945, 1040, 1270 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 604, 858, 888, 1400 |
| BsmFI | GGGAC | 4 cut(s) | 922, 945, 1040, 1270 |
| BsmI | GAATGC | 1 cut(s) | 1306 |
| BsnI | GGCC | 7 cut(s) | 96, 345, 381, 417, 608, 1393, 1423 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1241, 1359 |
| Bsp143I | GATC | 5 cut(s) | 107, 292, 656, 1275, 1440 |
| BspANI | GGCC | 7 cut(s) | 96, 345, 381, 417, 608, 1393, 1423 |
| BspCNI | CTCAG | 2 cut(s) | 133, 1447 |
| BspLI | GGNNCC | 4 cut(s) | 95, 259, 281, 463 |
| BspMAI | CTGCAG | 2 cut(s) | 57, 1150 |
| BspPI | GGATC | 2 cut(s) | 664, 1448 |
| BspQI | GCTCTTC | 1 cut(s) | 732 |
| BspT107I | GGYRCC | 2 cut(s) | 257, 279 |
| BsrDI | GCAATG | 1 cut(s) | 1067 |
| BsrI | ACTGG | 4 cut(s) | 281, 642, 882, 1129 |
| BssECI | CCNNGG | 3 cut(s) | 97, 349, 1077 |
| BssMI | GATC | 5 cut(s) | 107, 292, 656, 1275, 1440 |
| BssNAI | GTATAC | 1 cut(s) | 44 |
| BssT1I | CCWWGG | 2 cut(s) | 97, 1077 |
| Bst1107I | GTATAC | 1 cut(s) | 44 |
| Bst2UI | CCWGG | 2 cut(s) | 459, 1050 |
| Bst4CI | ACNGT | 5 cut(s) | 591, 817, 835, 955, 1004 |
| Bst6I | CTCTTC | 3 cut(s) | 732, 954, 1308 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1245 |
| BstC8I | GCNNGC | 1 cut(s) | 1452 |
| BstDEI | CTNAG | 2 cut(s) | 120, 1455 |
| BstDSI | CCRYGG | 1 cut(s) | 349 |
| BstEII | GGTNACC | 1 cut(s) | 1336 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 602, 1398 |
| BstF5I | GGATG | 5 cut(s) | 543, 1028, 1058, 1268, 1278 |
| BstHHI | GCGC | 1 cut(s) | 489 |
| BstKTI | GATC | 5 cut(s) | 110, 295, 659, 1278, 1443 |
| BstMBI | GATC | 5 cut(s) | 107, 292, 656, 1275, 1440 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 68, 551, 626, 1121, 1245, 1420 |
| BstNI | CCWGG | 2 cut(s) | 459, 1050 |
| BstNSI | RCATGY | 3 cut(s) | 654, 938, 1327 |
| BstPI | GGTNACC | 1 cut(s) | 1336 |
| BstSCI | CCNGG | 2 cut(s) | 457, 1048 |
| BstSFI | CTRYAG | 2 cut(s) | 53, 1146 |
| BstSLI | GKGCMC | 2 cut(s) | 1241, 1359 |
| BstV1I | GCAGC | 8 cut(s) | 74, 140, 538, 638, 791, 1160, 1369, 1372 |
| BstV2I | GAAGAC | 1 cut(s) | 213 |
| BstX2I | RGATCY | 2 cut(s) | 292, 656 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 191 |
| BstYI | RGATCY | 2 cut(s) | 292, 656 |
| BstZ17I | GTATAC | 1 cut(s) | 44 |
| BsuRI | GGCC | 7 cut(s) | 96, 345, 381, 417, 608, 1393, 1423 |
| BtgI | CCRYGG | 1 cut(s) | 349 |
| BtrI | CACGTC | 1 cut(s) | 356 |
| BtsCI | GGATG | 5 cut(s) | 543, 1028, 1058, 1268, 1278 |
| BtsI | GCAGTG | 1 cut(s) | 1241 |
| BtsIMutI | CAGTG | 4 cut(s) | 951, 1000, 1115, 1241 |
| Cac8I | GCNNGC | 1 cut(s) | 1452 |
| CfoI | GCGC | 1 cut(s) | 489 |
| Cfr13I | GGNCC | 2 cut(s) | 94, 866 |
| Csp6I | GTAC | 1 cut(s) | 280 |
| CviAII | CATG | 8 cut(s) | 80, 262, 491, 651, 935, 1220, 1245, 1324 |
| CviQI | GTAC | 1 cut(s) | 280 |
| DdeI | CTNAG | 2 cut(s) | 120, 1455 |
| DpnI | GATC | 5 cut(s) | 109, 294, 658, 1277, 1442 |
| DpnII | GATC | 5 cut(s) | 107, 292, 656, 1275, 1440 |
| EaeI | YGGCCR | 1 cut(s) | 415 |
| Eam1104I | CTCTTC | 3 cut(s) | 732, 954, 1308 |
| EarI | CTCTTC | 3 cut(s) | 732, 954, 1308 |
| Eco130I | CCWWGG | 2 cut(s) | 97, 1077 |
| Eco47I | GGWCC | 1 cut(s) | 866 |
| Eco57I | CTGAAG | 2 cut(s) | 1139, 1313 |
| Eco91I | GGTNACC | 1 cut(s) | 1336 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 602, 1398 |
| EcoO109I | RGGNCCY | 1 cut(s) | 94 |
| EcoO65I | GGTNACC | 1 cut(s) | 1336 |
| EcoRII | CCWGG | 2 cut(s) | 457, 1048 |
| EcoT14I | CCWWGG | 2 cut(s) | 97, 1077 |
| EcoT22I | ATGCAT | 1 cut(s) | 652 |
| ErhI | CCWWGG | 2 cut(s) | 97, 1077 |
| FaeI | CATG | 8 cut(s) | 83, 265, 494, 654, 938, 1223, 1248, 1327 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 761, 793, 1189, 1221 |
| FaqI | GGGAC | 4 cut(s) | 922, 945, 1040, 1270 |
| FatI | CATG | 8 cut(s) | 79, 261, 490, 650, 934, 1219, 1244, 1323 |
| FauNDI | CATATG | 1 cut(s) | 1085 |
| FbaI | TGATCA | 1 cut(s) | 1275 |
| FblI | GTMKAC | 1 cut(s) | 43 |
| Fnu4HI | GCNGC | 9 cut(s) | 63, 129, 552, 627, 805, 1149, 1383, 1386, 1476 |
| FokI | GGATG | 5 cut(s) | 550, 1035, 1045, 1275, 1285 |
| Fsp4HI | GCNGC | 9 cut(s) | 63, 129, 552, 627, 805, 1149, 1383, 1386, 1476 |
| FspBI | CTAG | 5 cut(s) | 98, 296, 546, 731, 992 |
| GlaI | GCGC | 1 cut(s) | 488 |
| GluI | GCNGC | 9 cut(s) | 63, 129, 552, 627, 805, 1149, 1383, 1386, 1476 |
| GsaI | CCCAGC | 1 cut(s) | 699 |
| HaeIII | GGCC | 7 cut(s) | 96, 345, 381, 417, 608, 1393, 1423 |
| HhaI | GCGC | 1 cut(s) | 489 |
| Hin1II | CATG | 8 cut(s) | 83, 265, 494, 654, 938, 1223, 1248, 1327 |
| Hin6I | GCGC | 1 cut(s) | 487 |
| HinP1I | GCGC | 1 cut(s) | 487 |
| HphI | GGTGA | 6 cut(s) | 211, 284, 584, 725, 1348, 1388 |
| Hpy166II | GTNNAC | 5 cut(s) | 44, 353, 455, 866, 1239 |
| Hpy188I | TCNGA | 1 cut(s) | 412 |
| Hpy188III | TCNNGA | 5 cut(s) | 173, 731, 930, 1134, 1331 |
| Hpy8I | GTNNAC | 5 cut(s) | 44, 353, 455, 866, 1239 |
| Hpy99I | CGWCG | 1 cut(s) | 449 |
| HpyAV | CCTTC | 4 cut(s) | 737, 787, 1114, 1453 |
| HpyCH4III | ACNGT | 5 cut(s) | 591, 817, 835, 955, 1004 |
| HpyCH4IV | ACGT | 1 cut(s) | 355 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 68, 551, 626, 1121, 1245, 1420 |
| HpyF3I | CTNAG | 2 cut(s) | 120, 1455 |
| HpySE526I | ACGT | 1 cut(s) | 355 |
| Hsp92II | CATG | 8 cut(s) | 83, 265, 494, 654, 938, 1223, 1248, 1327 |
| HspAI | GCGC | 1 cut(s) | 487 |
| KpnI | GGTACC | 1 cut(s) | 283 |
| Ksp22I | TGATCA | 1 cut(s) | 1275 |
| Kzo9I | GATC | 5 cut(s) | 107, 292, 656, 1275, 1440 |
| LguI | GCTCTTC | 1 cut(s) | 732 |
| LmnI | GCTCC | 1 cut(s) | 1447 |
| Lsp1109I | GCAGC | 8 cut(s) | 74, 140, 538, 638, 791, 1160, 1369, 1372 |
| LweI | GCATC | 3 cut(s) | 1102, 1177, 1369 |
| MaeI | CTAG | 5 cut(s) | 98, 296, 546, 731, 992 |
| MaeII | ACGT | 1 cut(s) | 355 |
| MaeIII | GTNAC | 4 cut(s) | 272, 817, 987, 1336 |
| MalI | GATC | 5 cut(s) | 109, 294, 658, 1277, 1442 |
| MboI | GATC | 5 cut(s) | 107, 292, 656, 1275, 1440 |
| MboII | GAAGA | 6 cut(s) | 218, 346, 719, 728, 971, 1325 |
| MfeI | CAATTG | 1 cut(s) | 1191 |
| MflI | RGATCY | 2 cut(s) | 292, 656 |
| MhlI | GDGCHC | 2 cut(s) | 1241, 1359 |
| MluCI | AATT | 7 cut(s) | 213, 480, 901, 914, 1044, 1191, 1463 |
| Mph1103I | ATGCAT | 1 cut(s) | 652 |
| MseI | TTAA | 5 cut(s) | 303, 593, 857, 1406, 1483 |
| MslI | CAYNNNNRTG | 3 cut(s) | 81, 189, 690 |
| MspA1I | CMGCKG | 3 cut(s) | 629, 1151, 1478 |
| MspR9I | CCNGG | 2 cut(s) | 459, 1050 |
| MunI | CAATTG | 1 cut(s) | 1191 |
| Mva1269I | GAATGC | 1 cut(s) | 1306 |
| MvaI | CCWGG | 2 cut(s) | 459, 1050 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 68, 551, 626, 1121, 1245, 1420 |
| NdeI | CATATG | 1 cut(s) | 1085 |
| NdeII | GATC | 5 cut(s) | 107, 292, 656, 1275, 1440 |
| NlaIII | CATG | 8 cut(s) | 83, 265, 494, 654, 938, 1223, 1248, 1327 |
| NlaIV | GGNNCC | 4 cut(s) | 95, 259, 281, 463 |
| NmuCI | GTSAC | 2 cut(s) | 272, 1336 |
| NsiI | ATGCAT | 1 cut(s) | 652 |
| NspI | RCATGY | 3 cut(s) | 654, 938, 1327 |
| OliI | CACNNNNGTG | 1 cut(s) | 690 |
| PciI | ACATGT | 1 cut(s) | 934 |
| PciSI | GCTCTTC | 1 cut(s) | 732 |
| PctI | GAATGC | 1 cut(s) | 1306 |
| PflFI | GACNNNGTC | 1 cut(s) | 1181 |
| PkrI | GCNGC | 9 cut(s) | 64, 130, 553, 628, 806, 1150, 1384, 1387, 1477 |
| PscI | ACATGT | 1 cut(s) | 934 |
| PsiI | TTATAA | 1 cut(s) | 30 |
| Psp6I | CCWGG | 2 cut(s) | 457, 1048 |
| PspEI | GGTNACC | 1 cut(s) | 1336 |
| PspFI | CCCAGC | 1 cut(s) | 695 |
| PspGI | CCWGG | 2 cut(s) | 457, 1048 |
| PspN4I | GGNNCC | 4 cut(s) | 95, 259, 281, 463 |
| PspPI | GGNCC | 2 cut(s) | 94, 866 |
| PstI | CTGCAG | 2 cut(s) | 57, 1150 |
| PsuI | RGATCY | 2 cut(s) | 292, 656 |
| PsyI | GACNNNGTC | 1 cut(s) | 1181 |
| PvuII | CAGCTG | 3 cut(s) | 629, 1151, 1478 |
| RsaI | GTAC | 1 cut(s) | 281 |
| RsaNI | GTAC | 1 cut(s) | 280 |
| RseI | CAYNNNNRTG | 3 cut(s) | 81, 189, 690 |
| SapI | GCTCTTC | 1 cut(s) | 732 |
| SaqAI | TTAA | 5 cut(s) | 303, 593, 857, 1406, 1483 |
| SatI | GCNGC | 9 cut(s) | 63, 129, 552, 627, 805, 1149, 1383, 1386, 1476 |
| Sau3AI | GATC | 5 cut(s) | 107, 292, 656, 1275, 1440 |
| Sau96I | GGNCC | 2 cut(s) | 94, 866 |
| ScrFI | CCNGG | 2 cut(s) | 459, 1050 |
| SduI | GDGCHC | 2 cut(s) | 1241, 1359 |
| SfaNI | GCATC | 3 cut(s) | 1102, 1177, 1369 |
| SfcI | CTRYAG | 2 cut(s) | 53, 1146 |
| SinI | GGWCC | 1 cut(s) | 866 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 81, 189, 690 |
| SmlI | CTYRAG | 1 cut(s) | 1430 |
| SmoI | CTYRAG | 1 cut(s) | 1430 |
| Sse9I | AATT | 7 cut(s) | 213, 480, 901, 914, 1044, 1191, 1463 |
| SspMI | CTAG | 5 cut(s) | 98, 296, 546, 731, 992 |
| StyD4I | CCNGG | 2 cut(s) | 457, 1048 |
| StyI | CCWWGG | 2 cut(s) | 97, 1077 |
| TaaI | ACNGT | 5 cut(s) | 591, 817, 835, 955, 1004 |
| TaiI | ACGT | 1 cut(s) | 358 |
| TaqI | TCGA | 3 cut(s) | 1172, 1185, 1281 |
| TaqII | GACCGA | 1 cut(s) | 225 |
| TasI | AATT | 7 cut(s) | 213, 480, 901, 914, 1044, 1191, 1463 |
| Tru1I | TTAA | 5 cut(s) | 303, 593, 857, 1406, 1483 |
| Tru9I | TTAA | 5 cut(s) | 303, 593, 857, 1406, 1483 |
| TscAI | CASTG | 4 cut(s) | 958, 1007, 1122, 1241 |
| TseFI | GTSAC | 2 cut(s) | 272, 1336 |
| TseI | GCWGC | 9 cut(s) | 62, 128, 551, 626, 804, 1148, 1382, 1385, 1475 |
| Tsp45I | GTSAC | 2 cut(s) | 272, 1336 |
| TspDTI | ATGAA | 8 cut(s) | 219, 278, 342, 347, 600, 630, 1047, 1304 |
| TspGWI | ACGGA | 3 cut(s) | 338, 411, 1051 |
| TspRI | CASTG | 4 cut(s) | 958, 1007, 1122, 1241 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1181 |
| VneI | GTGCAC | 1 cut(s) | 1237 |
| VpaK11BI | GGWCC | 1 cut(s) | 866 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 602, 1398 |
| XapI | RAATTY | 1 cut(s) | 213 |
| XbaI | TCTAGA | 1 cut(s) | 730 |
| XceI | RCATGY | 3 cut(s) | 654, 938, 1327 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 686, 692 |
| XmaJI | CCTAGG | 1 cut(s) | 97 |
| XmiI | GTMKAC | 1 cut(s) | 43 |
| XspI | CTAG | 5 cut(s) | 98, 296, 546, 731, 992 |
| Zsp2I | ATGCAT | 1 cut(s) | 652 |