MD16G1124800.v1.1
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
Physical Location & Seq
Forward (+)
9053721 .. 9058104
4384 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1124800.v1.1.491

Sequence Viewer

Length: 1389 bp
ATGGGTTGTTTTCCTTGTTTCGATTCGAAGGAGGAGGAGAAGCTGAACAATCCAGCGGCAGAAATTGATAACAGAAAGCAGGTTCAACCAACGGTCTCTAATAACATTTCCAGATTGCCTTCTGGAGTAGACAGACTGAGATCAAGAAGCAATGGAGGATCCAGGGGGGAGCTGCCCAAATTGCCTGAGCCCAAAGATGTTGTACCGGGGGGGCAAATTGCTGCTCAAACTTTCACTTTCCGTGAACTCGCGACTGCAACAAAGAACTTCAGGCCAGAGTCTTTCATAGGGGAAGGGGGATTTGGGCGTGTATACAAGGGGCAACTCGAAAGCACTGGTCAGGTGGTTGCTGTTAAACAATTGGATAGGAATGGACTTCAGGGCAACAGAGAATTTCTTGTTGAGGTTCTCATGCTCAGTCTTCTGCATCACCCTAATCTAGTGAATCTTATTGGGTACTGTGCTGATGGAGACCAGCGGCTTCTTGTTTATGAATTTATGCCCTTAGGATCATTGGAAGATCACCTTCACGATCTTCCACCTGATAAGGAACCATTGGATTGGAACACACGAATGAAAATAGCTTCCGGTGCAGCCAAAGGATTGGAATACCTGCACGACGAGGCAAACCCTCCAGTTATTTACAGGGACTTCAAATCATCCAACATATTGCTGGAAGAAGAATTTCACCCTAAGCTTTCAGATTTTGGGCTTGCAAAGCTTGGTCCCACCGGAGACAAGTCCCATGTGTCCACAAGAGTTATGGGCACTTACGGTTATTGTGCTCCTGAATATGCAATGACTGGTCAATTGACAGTAAAGTCAGACGTATACAGTTTTGGGGTAGTGTTTCTGGAGCTGATTACTGGACGTAAGGCTATAGATAGCGACCGGCCCCATGGAGAACAGAACCTTATAACTTGGGCACGTCCATTGTTCAATGATCGAAGGAAGTTCTCGAAATTGGCAGACCCAAGACTGCAGGGTCGGTATCCTATGCGGGGTCTCTACCAAGCTCTAGCCGTGGCATCCATGTGCATCCAGGAACAGGCTGCCACACGACCTCTCATTGGGGATGTGGTTACTGCTCTGTCGTACCTAGCCAACCACTCTTATGACCCTAACTCAGCTTCAGGTAATGGCCACAGAGGTTCGGGAGAAAAAAATGAGAAAAGGCATAGGGATGGTGGAAGGATATTGAAAAATGAGGAAGGGGGAGGATCCGGACGGAGCTGGGGGTTAGATGGTTCCGAGAAGGATGAGTCCCCAAAGGAAACTGCAAGGATGTTGGATAGGGAACGAGCGGTTGCTGAGGCTAAGATGTGGGGAGAGAATTGGCGAGAGAAAAGACGACAGAGTGCACAAGGCAGTTTTGATGGCACCAGCTAG

Protein Analysis

463

Amino Acids

51.27

Weight (kDa)

6.85

Isoelectric Point (pI)

36.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 93 - 301 8.9e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 95 - 293 3e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 917
AasI GACNNNNNNGTC 2 cut(s) 820, 984
Acc36I ACCTGC 2 cut(s) 70, 621
AccB1I GGYRCC 1 cut(s) 1379
AccBSI CCGCTC 1 cut(s) 1304
AccI GTMKAC 3 cut(s) 129, 312, 831
AccII CGCG 1 cut(s) 251
AccIII TCCGGA 1 cut(s) 1223
AciI CCGC 4 cut(s) 56, 478, 1000, 1304
AclWI GGATC 5 cut(s) 153, 166, 517, 1215, 1228
AcoI YGGCCR 1 cut(s) 1141
AcsI RAATTY 3 cut(s) 392, 494, 683
AcuI CTGAAG 3 cut(s) 253, 362, 1116
AfaI GTAC 3 cut(s) 204, 458, 1097
AfiI CCNNNNNNNGG 3 cut(s) 1001, 1048, 1070
AgsI TTSAA 4 cut(s) 86, 655, 940, 1201
AjiI CACGTC 1 cut(s) 929
AjnI CCWGG 2 cut(s) 161, 1041
AjuI GAANNNNNNNTTGG 2 cut(s) 285, 317
Alw21I GWGCWC 2 cut(s) 787, 1363
Alw26I GTCTC 4 cut(s) 100, 465, 729, 1010
Alw44I GTGCAC 1 cut(s) 1359
AlwI GGATC 5 cut(s) 153, 166, 517, 1215, 1228
Aor13HI TCCGGA 1 cut(s) 1223
AoxI GGCC 3 cut(s) 272, 893, 1141
ApaLI GTGCAC 1 cut(s) 1359
ApeKI GCWGC 4 cut(s) 172, 221, 593, 1052
ApoI RAATTY 3 cut(s) 392, 494, 683
Asp700I GAANNNNTTC 1 cut(s) 684
AspS9I GGNCC 2 cut(s) 725, 894
AsuC2I CCSGG 1 cut(s) 207
AsuHPI GGTGA 3 cut(s) 422, 515, 680
AsuII TTCGAA 1 cut(s) 26
AvaII GGWCC 1 cut(s) 725
AxyI CCTNAGG 1 cut(s) 505
BaeGI GKGCMC 3 cut(s) 770, 928, 1363
BalI TGGCCA 1 cut(s) 1143
BamHI GGATCC 2 cut(s) 158, 1220
BanI GGYRCC 1 cut(s) 1379
BanII GRGCYC 1 cut(s) 192
BbsI GAAGAC 1 cut(s) 413
Bbv12I GWGCWC 2 cut(s) 787, 1363
BbvCI CCTCAGC 1 cut(s) 1311
BbvI GCAGC 4 cut(s) 159, 208, 605, 1039
BccI CCATC 4 cut(s) 461, 1178, 1238, 1370
BceAI ACGGC 1 cut(s) 1007
BciT130I CCWGG 2 cut(s) 163, 1043
BciVI GTATCC 1 cut(s) 1002
BcnI CCSGG 1 cut(s) 207
BcoDI GTCTC 4 cut(s) 100, 465, 729, 1010
BfaI CTAG 4 cut(s) 440, 1019, 1100, 1387
BfmI CTRYAG 2 cut(s) 879, 980
BfuAI ACCTGC 2 cut(s) 70, 621
BfuI GTATCC 1 cut(s) 1002
BisI GCNGC 6 cut(s) 57, 173, 222, 479, 594, 1053
BlsI GCNGC 6 cut(s) 58, 174, 223, 480, 595, 1054
Bme1390I CCNGG 3 cut(s) 163, 207, 1043
Bme18I GGWCC 1 cut(s) 725
BmgBI CACGTC 1 cut(s) 929
BmgT120I GGNCC 2 cut(s) 725, 894
BmiI GGNNCC 7 cut(s) 160, 552, 727, 896, 1222, 1249, 1381
BmrFI CCNGG 3 cut(s) 163, 207, 1043
BmsI GCATC 3 cut(s) 436, 1037, 1047
BpiI GAAGAC 1 cut(s) 413
BpmI CTGGAG 3 cut(s) 144, 618, 875
Bpu10I CCTNAGC 3 cut(s) 186, 693, 1311
Bpu14I TTCGAA 1 cut(s) 26
BpuMI CCSGG 1 cut(s) 207
BsaI GGTCTC 3 cut(s) 100, 465, 1010
BsaJI CCNNGG 4 cut(s) 162, 206, 898, 1023
BsaWI WCCGGW 3 cut(s) 587, 731, 1223
Bsc4I CCNNNNNNNGG 3 cut(s) 1001, 1048, 1070
Bse118I RCCGGY 1 cut(s) 891
Bse1I ACTGG 4 cut(s) 340, 635, 808, 871
Bse21I CCTNAGG 1 cut(s) 505
Bse3DI GCAATG 2 cut(s) 157, 804
BseAI TCCGGA 1 cut(s) 1223
BseBI CCWGG 2 cut(s) 163, 1043
BseDI CCNNGG 4 cut(s) 162, 206, 898, 1023
BseGI GGATG 7 cut(s) 659, 1028, 1038, 1081, 1189, 1264, 1290
BseLI CCNNNNNNNGG 3 cut(s) 1001, 1048, 1070
BseMI GCAATG 2 cut(s) 157, 804
BseMII CTCAG 5 cut(s) 128, 177, 430, 1140, 1302
BseNI ACTGG 4 cut(s) 340, 635, 808, 871
BseRI GAGGAG 2 cut(s) 47, 50
BseSI GKGCMC 3 cut(s) 770, 928, 1363
BseXI GCAGC 4 cut(s) 159, 208, 605, 1039
BseYI CCCAGC 1 cut(s) 1233
BsgI GTGCAG 2 cut(s) 599, 612
Bsh1236I CGCG 1 cut(s) 251
Bsh1285I CGRYCG 1 cut(s) 892
BshFI GGCC 3 cut(s) 274, 895, 1143
BshNI GGYRCC 1 cut(s) 1379
BsiEI CGRYCG 1 cut(s) 892
BsiHKAI GWGCWC 2 cut(s) 787, 1363
BsiSI CCGG 5 cut(s) 206, 588, 732, 892, 1224
BslFI GGGAC 4 cut(s) 662, 711, 727, 1249
BslI CCNNNNNNNGG 3 cut(s) 1001, 1048, 1070
BsmAI GTCTC 4 cut(s) 100, 465, 729, 1010
BsmFI GGGAC 4 cut(s) 662, 711, 727, 1249
BsnI GGCC 3 cut(s) 274, 895, 1143
Bso31I GGTCTC 3 cut(s) 100, 465, 1010
Bsp119I TTCGAA 1 cut(s) 26
Bsp1286I GDGCHC 5 cut(s) 192, 770, 787, 928, 1363
Bsp13I TCCGGA 1 cut(s) 1223
Bsp143I GATC 7 cut(s) 140, 158, 509, 520, 532, 943, 1220
Bsp19I CCATGG 1 cut(s) 898
Bsp68I TCGCGA 1 cut(s) 251
BspACI CCGC 4 cut(s) 56, 478, 1000, 1304
BspANI GGCC 3 cut(s) 274, 895, 1143
BspCNI CTCAG 5 cut(s) 129, 178, 429, 1139, 1303
BspEI TCCGGA 1 cut(s) 1223
BspFNI CGCG 1 cut(s) 251
BspLI GGNNCC 7 cut(s) 160, 552, 727, 896, 1222, 1249, 1381
BspMAI CTGCAG 1 cut(s) 984
BspMI ACCTGC 2 cut(s) 70, 621
BspPI GGATC 5 cut(s) 153, 166, 517, 1215, 1228
BspT104I TTCGAA 1 cut(s) 26
BspT107I GGYRCC 1 cut(s) 1379
BspTNI GGTCTC 3 cut(s) 100, 465, 1010
BsrBI CCGCTC 1 cut(s) 1304
BsrDI GCAATG 2 cut(s) 157, 804
BsrFI RCCGGY 1 cut(s) 891
BsrI ACTGG 4 cut(s) 340, 635, 808, 871
BssAI RCCGGY 1 cut(s) 891
BssECI CCNNGG 4 cut(s) 162, 206, 898, 1023
BssMI GATC 7 cut(s) 140, 158, 509, 520, 532, 943, 1220
BssNAI GTATAC 2 cut(s) 313, 832
BssT1I CCWWGG 1 cut(s) 898
Bst1107I GTATAC 2 cut(s) 313, 832
Bst2UI CCWGG 2 cut(s) 163, 1043
Bst4CI ACNGT 5 cut(s) 94, 461, 776, 817, 836
BstBI TTCGAA 1 cut(s) 26
BstC8I GCNNGC 1 cut(s) 714
BstDEI CTNAG 8 cut(s) 137, 186, 416, 505, 693, 1126, 1311, 1317
BstDSI CCRYGG 2 cut(s) 898, 1023
BstF5I GGATG 7 cut(s) 659, 1028, 1038, 1081, 1189, 1264, 1290
BstFNI CGCG 1 cut(s) 251
BstKTI GATC 7 cut(s) 143, 161, 512, 523, 535, 946, 1223
BstMAI GTCTC 4 cut(s) 100, 465, 729, 1010
BstMBI GATC 7 cut(s) 140, 158, 509, 520, 532, 943, 1220
BstMCI CGRYCG 1 cut(s) 892
BstMWI GCNNNNNNNGC 3 cut(s) 181, 590, 718
BstNI CCWGG 2 cut(s) 163, 1043
BstSCI CCNGG 3 cut(s) 161, 205, 1041
BstSFI CTRYAG 2 cut(s) 879, 980
BstSLI GKGCMC 3 cut(s) 770, 928, 1363
BstUI CGCG 1 cut(s) 251
BstV1I GCAGC 4 cut(s) 159, 208, 605, 1039
BstV2I GAAGAC 1 cut(s) 413
BstX2I RGATCY 2 cut(s) 158, 1220
BstXI CCANNNNNNTGG 2 cut(s) 561, 604
BstYI RGATCY 2 cut(s) 158, 1220
BstZ17I GTATAC 2 cut(s) 313, 832
Bsu36I CCTNAGG 1 cut(s) 505
BsuI GTATCC 1 cut(s) 1002
BsuRI GGCC 3 cut(s) 274, 895, 1143
BtgI CCRYGG 2 cut(s) 898, 1023
BtrI CACGTC 1 cut(s) 929
BtsCI GGATG 7 cut(s) 659, 1028, 1038, 1081, 1189, 1264, 1290
BtsIMutI CAGTG 1 cut(s) 333
BtuMI TCGCGA 1 cut(s) 251
BveI ACCTGC 2 cut(s) 70, 621
Cac8I GCNNGC 1 cut(s) 714
Cfr10I RCCGGY 1 cut(s) 891
Cfr13I GGNCC 2 cut(s) 725, 894
Csp6I GTAC 3 cut(s) 203, 457, 1096
CviAII CATG 4 cut(s) 412, 746, 899, 1033
CviQI GTAC 3 cut(s) 203, 457, 1096
DdeI CTNAG 8 cut(s) 137, 186, 416, 505, 693, 1126, 1311, 1317
DpnI GATC 7 cut(s) 142, 160, 511, 522, 534, 945, 1222
DpnII GATC 7 cut(s) 140, 158, 509, 520, 532, 943, 1220
DrdI GACNNNNNNGTC 2 cut(s) 820, 984
DseDI GACNNNNNNGTC 2 cut(s) 820, 984
EaeI YGGCCR 1 cut(s) 1141
Eco130I CCWWGG 1 cut(s) 898
Eco24I GRGCYC 1 cut(s) 192
Eco31I GGTCTC 3 cut(s) 100, 465, 1010
Eco47I GGWCC 1 cut(s) 725
Eco57I CTGAAG 3 cut(s) 253, 362, 1116
Eco81I CCTNAGG 1 cut(s) 505
EcoRII CCWGG 2 cut(s) 161, 1041
EcoT14I CCWWGG 1 cut(s) 898
EcoT38I GRGCYC 1 cut(s) 192
ErhI CCWWGG 1 cut(s) 898
FaeI CATG 4 cut(s) 415, 749, 902, 1036
FalI AAGNNNNNCTT 2 cut(s) 510, 542
FaqI GGGAC 4 cut(s) 662, 711, 727, 1249
FatI CATG 4 cut(s) 411, 745, 898, 1032
FauI CCCGC 1 cut(s) 993
FblI GTMKAC 3 cut(s) 129, 312, 831
Fnu4HI GCNGC 6 cut(s) 57, 173, 222, 479, 594, 1053
FokI GGATG 7 cut(s) 646, 1015, 1025, 1088, 1196, 1271, 1297
FriOI GRGCYC 1 cut(s) 192
Fsp4HI GCNGC 6 cut(s) 57, 173, 222, 479, 594, 1053
FspBI CTAG 4 cut(s) 440, 1019, 1100, 1387
GluI GCNGC 6 cut(s) 57, 173, 222, 479, 594, 1053
GsaI CCCAGC 1 cut(s) 1237
GsuI CTGGAG 3 cut(s) 144, 618, 875
HaeIII GGCC 3 cut(s) 274, 895, 1143
HapII CCGG 5 cut(s) 206, 588, 732, 892, 1224
Hin1II CATG 4 cut(s) 415, 749, 902, 1036
HindIII AAGCTT 2 cut(s) 695, 719
HinfI GANTC 4 cut(s) 23, 278, 445, 1262
HpaII CCGG 5 cut(s) 206, 588, 732, 892, 1224
HphI GGTGA 3 cut(s) 422, 515, 680
Hpy166II GTNNAC 6 cut(s) 130, 245, 313, 753, 832, 1361
Hpy188I TCNGA 3 cut(s) 703, 826, 1252
Hpy8I GTNNAC 6 cut(s) 130, 245, 313, 753, 832, 1361
Hpy99I CGWCG 1 cut(s) 623
HpyAV CCTTC 8 cut(s) 22, 129, 287, 536, 942, 1185, 1205, 1249
HpyCH4III ACNGT 5 cut(s) 94, 461, 776, 817, 836
HpyCH4IV ACGT 3 cut(s) 828, 871, 928
HpyF10VI GCNNNNNNNGC 3 cut(s) 181, 590, 718
HpyF3I CTNAG 8 cut(s) 137, 186, 416, 505, 693, 1126, 1311, 1317
HpySE526I ACGT 3 cut(s) 828, 871, 928
Hsp92II CATG 4 cut(s) 415, 749, 902, 1036
Kpn2I TCCGGA 1 cut(s) 1223
Kzo9I GATC 7 cut(s) 140, 158, 509, 520, 532, 943, 1220
LmnI GCTCC 4 cut(s) 169, 790, 856, 1230
Lsp1109I GCAGC 4 cut(s) 159, 208, 605, 1039
LweI GCATC 3 cut(s) 436, 1037, 1047
MaeI CTAG 4 cut(s) 440, 1019, 1100, 1387
MaeII ACGT 3 cut(s) 828, 871, 928
MaeIII GTNAC 1 cut(s) 1081
MalI GATC 7 cut(s) 142, 160, 511, 522, 534, 945, 1222
MbiI CCGCTC 1 cut(s) 1304
MboI GATC 7 cut(s) 140, 158, 509, 520, 532, 943, 1220
MboII GAAGA 5 cut(s) 413, 527, 530, 689, 692
MfeI CAATTG 2 cut(s) 359, 809
MflI RGATCY 2 cut(s) 158, 1220
MhlI GDGCHC 5 cut(s) 192, 770, 787, 928, 1363
MlsI TGGCCA 1 cut(s) 1143
MluNI TGGCCA 1 cut(s) 1143
MlyI GAGTC 2 cut(s) 287, 1271
MmeI TCCRAC 2 cut(s) 687, 1269
Mox20I TGGCCA 1 cut(s) 1143
MroI TCCGGA 1 cut(s) 1223
MroXI GAANNNNTTC 1 cut(s) 684
MscI TGGCCA 1 cut(s) 1143
MseI TTAA 1 cut(s) 354
MslI CAYNNNNRTG 4 cut(s) 572, 1033, 1113, 1182
Msp20I TGGCCA 1 cut(s) 1143
MspA1I CMGCKG 2 cut(s) 56, 478
MspI CCGG 5 cut(s) 206, 588, 732, 892, 1224
MspR9I CCNGG 3 cut(s) 163, 207, 1043
MunI CAATTG 2 cut(s) 359, 809
MvaI CCWGG 2 cut(s) 163, 1043
MvnI CGCG 1 cut(s) 251
MwoI GCNNNNNNNGC 3 cut(s) 181, 590, 718
NciI CCSGG 1 cut(s) 207
NcoI CCATGG 1 cut(s) 898
NdeII GATC 7 cut(s) 140, 158, 509, 520, 532, 943, 1220
NlaIII CATG 4 cut(s) 415, 749, 902, 1036
NlaIV GGNNCC 7 cut(s) 160, 552, 727, 896, 1222, 1249, 1381
NruI TCGCGA 1 cut(s) 251
NspV TTCGAA 1 cut(s) 26
PdmI GAANNNNTTC 1 cut(s) 684
PfeI GAWTC 2 cut(s) 23, 445
PfoI TCCNGGA 1 cut(s) 1041
PkrI GCNGC 6 cut(s) 58, 174, 223, 480, 595, 1054
PleI GAGTC 2 cut(s) 286, 1270
PpsI GAGTC 2 cut(s) 286, 1270
PsiI TTATAA 1 cut(s) 917
Psp6I CCWGG 2 cut(s) 161, 1041
PspFI CCCAGC 1 cut(s) 1233
PspGI CCWGG 2 cut(s) 161, 1041
PspN4I GGNNCC 7 cut(s) 160, 552, 727, 896, 1222, 1249, 1381
PspPI GGNCC 2 cut(s) 725, 894
PstI CTGCAG 1 cut(s) 984
PsuI RGATCY 2 cut(s) 158, 1220
RruI TCGCGA 1 cut(s) 251
RsaI GTAC 3 cut(s) 204, 458, 1097
RsaNI GTAC 3 cut(s) 203, 457, 1096
RseI CAYNNNNRTG 4 cut(s) 572, 1033, 1113, 1182
SaqAI TTAA 1 cut(s) 354
SatI GCNGC 6 cut(s) 57, 173, 222, 479, 594, 1053
Sau3AI GATC 7 cut(s) 140, 158, 509, 520, 532, 943, 1220
Sau96I GGNCC 2 cut(s) 725, 894
SchI GAGTC 2 cut(s) 287, 1271
ScrFI CCNGG 3 cut(s) 163, 207, 1043
SduI GDGCHC 5 cut(s) 192, 770, 787, 928, 1363
SfaNI GCATC 3 cut(s) 436, 1037, 1047
SfcI CTRYAG 2 cut(s) 879, 980
SfuI TTCGAA 1 cut(s) 26
SinI GGWCC 1 cut(s) 725
SmiMI CAYNNNNRTG 4 cut(s) 572, 1033, 1113, 1182
SsiI CCGC 4 cut(s) 56, 478, 1000, 1304
SspMI CTAG 4 cut(s) 440, 1019, 1100, 1387
StyD4I CCNGG 3 cut(s) 161, 205, 1041
StyI CCWWGG 1 cut(s) 898
TaaI ACNGT 5 cut(s) 94, 461, 776, 817, 836
TaiI ACGT 3 cut(s) 831, 874, 931
TaqI TCGA 5 cut(s) 21, 26, 327, 946, 959
TauI GCSGC 2 cut(s) 59, 481
TfiI GAWTC 2 cut(s) 23, 445
Tru1I TTAA 1 cut(s) 354
Tru9I TTAA 1 cut(s) 354
TscAI CASTG 1 cut(s) 340
TseI GCWGC 4 cut(s) 172, 221, 593, 1052
TspDTI ATGAA 3 cut(s) 274, 507, 590
TspGWI ACGGA 2 cut(s) 230, 1243
TspRI CASTG 1 cut(s) 340
VneI GTGCAC 1 cut(s) 1359
VpaK11BI GGWCC 1 cut(s) 725
XapI RAATTY 3 cut(s) 392, 494, 683
XcmI CCANNNNNNNNNTGG 2 cut(s) 670, 760
XmiI GTMKAC 3 cut(s) 129, 312, 831
XmnI GAANNNNTTC 1 cut(s) 684
XspI CTAG 4 cut(s) 440, 1019, 1100, 1387
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.