Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0008924

Physical Location & Seq

Genomic Coordinates Reverse (-)

54288303 .. 54292506

Gene Structure 4204 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ39830

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1416 bp

ATGGGGTGTTTTCCGTGTTTTGATTCCAAGGAGGAGGAGAAGCTGAATCCGGCGAAAGAAAGCGATGATCGGAAGCAGGGTCAACCGACGGTGTCTTCTAACATTTCGAGATTGCCTTCCGGAGTTGACAGACTAAGGTCAAGAAGCAATGGGGGGTCAAGAAGGGTGGATGTAGGGTCCAAAATGCCTGATCCCAAGGATGTAGTACCTGGGGGTCAAATTGCTGCCCAAACTTTCACTTTTCGTGAGCTTGCCGCTGCAACAAAAAATTTTAGGCCAGAATCTTTCATAGGAGAAGGGGGTTTTGGGCGTGTATACAAGGGGCGACTCGAGAGCACCGGTCAAATTGTTGCTGTTAAGCAATTGGATAGGAATGGACTTCAGGGTAATAGAGAGTTTCTAGTTGAGGTTCTCATGCTAAGTCTTCTACATCATACTAACCTTGTGAACCTGATTGGATACTGTGCGGATGGAGATCAAAGGCTTCTTGTTTATGAGTTTATGCCCTTAGGATCATTGGAAGATCACCTTCATGATGTTCCTCTGGATAAAGAAGTATTGGATTGGAACACAAGAATGAAAATAGCTGCTGGTGCAGCCAAAGGATTGGAATACCTACATGACAAGGCTAACCCTCCAGTTATTTACAGGGACTTCAAATCATCCAACATATTACTGGAAGAAGGATTTCACCCTAAGCTTTCAGATTTTGGGCTCGCAAAGCTTGGTCCTACCGGAGACAAGTCACATGTTTCTACCAGGGTTATGGGTACTTATGGTTATTGTGCTCCAGAGTATGCAATGACTGGACAATTGACAGTGAAGTCGGATGTCTACAGTTTTGGGGTGGTGTTTCTGGAGCTGATTACTGGCCGTAAAGCCATTGATAGCACTAGACCCCATGGGGAACAGAACCTTGTCACTTGGGCACGTCCCTTGTTCAACGATCGCAGGAAGTTTTCAAAATTGGCAGATCCGAGGCTGCAGGGCCGGTATCCAATGAGGGGCCTCTACCAAGCTCTTGCTGTGGCATCCATGTGCATTCAGGAACAAGCCGCCACACGTCCTCTGATTGGGGATGTGGTTACTGCTCTATCTTATCTAGCCAACCAGGCATACGATCCTACCGCTGCATCAGGGCATGGCCATAGAAGTTCTGGAGAAAAGGATGAGAGACGAAGAGATGAGAGAGGTGGAAGGATATTGAGGAATGAGGAAGGAGGAGGATCTGGACGCAAATGGCCGGATTTAGATGGTGGGTCTGAGAAGGATGATTCCCCAAAGGAAACTGCAAGGATGTTAAACCGGGATTTGGATAGAGAACGAGCTGTTGCTGAGGCCAAGATGTGGGGTGAGAATTGGCGAGAGAAGAGACGACAGAGTGCACAGGGCAGTTTTGATGGTACTAATTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002218 GO:0002221 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0002757 GO:0002758 GO:0002764 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009814 GO:0009816 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0031347 GO:0031349 GO:0036211 GO:0038023 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0046777 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Pkinase

Protein Analysis

471

Amino Acids

52.32

Weight (kDa)

8.61

Isoelectric Point (pI)

38.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	94 - 299	2.3e-44	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	96 - 297	1.2e-43	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008924)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13160
fragaria_vesca	FvH4_4g23170 FvH4_4g23170 FvH4_4g23170 FvH4_4g23170 FvH4_4g23170
malus_domestica	MD13G1124200.v1.1 MD16G1124800.v1.1
prunus_persica	Prupe.1G220800_v2.0.a1 Prupe.1G220800_v2.0.a1
pyrus_communis	pycom13g10860 pycom16g10660
rosa_chinensis	RchiOBHm_Chr4g0429521
rosa_laevigata	RLG00000007064
rosa_multiflora	Rmu_sc0003708.1_g000004
rosa_roxburghii	Rroxscaffold_5G00371210
rosa_rugosa	Rorug04G0236700 Rorug04G0236800
rosa_samantha	Rh4BG298100 Rh4CG313700 Rh4DG295200
rosa_wichuraiana	Rw4G025320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	823
AccB7I	CCANNNNNTGG	1 cut(s)	1347
AccI	GTMKAC	2 cut(s)	315, 834
AccIII	TCCGGA	1 cut(s)	119
AciI	CCGC	4 cut(s)	255, 467, 1056, 1128
AclWI	GGATC	5 cut(s)	185, 520, 968, 1115, 1234
AcoI	YGGCCR	3 cut(s)	871, 1144, 1241
AcsI	RAATTY	1 cut(s)	268
AcuI	CTGAAG	1 cut(s)	365
AfaI	GTAC	3 cut(s)	207, 772, 1405
AfiI	CCNNNNNNNGG	4 cut(s)	1004, 1073, 1312, 1347
AflIII	ACRYGT	2 cut(s)	748, 1061
AgeI	ACCGGT	1 cut(s)	338
AgsI	TTSAA	3 cut(s)	658, 943, 963
AjiI	CACGTC	2 cut(s)	932, 1064
AjnI	CCWGG	3 cut(s)	208, 758, 1110
AjuI	GAANNNNNNNTTGG	2 cut(s)	288, 320
AluBI	AGCT	8 cut(s)	43, 250, 587, 700, 724, 862, 1019, 1328
AluI	AGCT	8 cut(s)	43, 250, 587, 700, 724, 862, 1019, 1328
Alw21I	GWGCWC	3 cut(s)	338, 790, 1387
Alw26I	GTCTC	3 cut(s)	732, 1168, 1366
Alw44I	GTGCAC	1 cut(s)	1383
AlwI	GGATC	5 cut(s)	185, 520, 968, 1115, 1234
Ama87I	CYCGRG	1 cut(s)	329
Aor13HI	TCCGGA	1 cut(s)	119
AoxI	GGCC	7 cut(s)	275, 871, 988, 1006, 1144, 1241, 1338
ApaLI	GTGCAC	1 cut(s)	1383
ApeKI	GCWGC	6 cut(s)	224, 257, 587, 596, 982, 1130
ApoI	RAATTY	1 cut(s)	268
AsiGI	ACCGGT	1 cut(s)	338
Asp700I	GAANNNNTTC	1 cut(s)	687
AspS9I	GGNCC	4 cut(s)	177, 728, 988, 1006
AsuC2I	CCSGG	1 cut(s)	1307
AsuHPI	GGTGA	3 cut(s)	518, 683, 1364
AvaI	CYCGRG	1 cut(s)	329
AvaII	GGWCC	2 cut(s)	177, 728
AxyI	CCTNAGG	1 cut(s)	508
BaeGI	GKGCMC	2 cut(s)	931, 1387
BalI	TGGCCA	1 cut(s)	1146
BanII	GRGCYC	1 cut(s)	717
BbsI	GAAGAC	2 cut(s)	87, 416
Bbv12I	GWGCWC	3 cut(s)	338, 790, 1387
BbvCI	CCTCAGC	1 cut(s)	1335
BbvI	GCAGC	6 cut(s)	211, 244, 574, 608, 969, 1117
BccI	CCATC	3 cut(s)	464, 1247, 1394
BceAI	ACGGC	1 cut(s)	858
BciT130I	CCWGG	3 cut(s)	210, 760, 1112
BciVI	GTATCC	2 cut(s)	452, 1005
BcnI	CCSGG	1 cut(s)	1307
BcoDI	GTCTC	3 cut(s)	732, 1168, 1366
BfaI	CTAG	3 cut(s)	401, 894, 1103
BfmI	CTRYAG	2 cut(s)	835, 983
BfuI	GTATCC	2 cut(s)	452, 1005
BglI	GCCNNNNNGGC	1 cut(s)	1112
BisI	GCNGC	8 cut(s)	225, 255, 258, 588, 597, 983, 1056, 1131
BlsI	GCNGC	8 cut(s)	226, 256, 259, 589, 598, 984, 1057, 1132
Bme1390I	CCNGG	4 cut(s)	210, 760, 1112, 1307
Bme18I	GGWCC	2 cut(s)	177, 728
BmeT110I	CYCGRG	1 cut(s)	329
BmgBI	CACGTC	2 cut(s)	932, 1064
BmgT120I	GGNCC	4 cut(s)	177, 728, 988, 1006
BmiI	GGNNCC	2 cut(s)	178, 1007
BmrFI	CCNGG	4 cut(s)	210, 760, 1112, 1307
BmsI	GCATC	2 cut(s)	1040, 1142
BoxI	GACNNNNGTC	1 cut(s)	136
BpiI	GAAGAC	2 cut(s)	87, 416
BpmI	CTGGAG	4 cut(s)	621, 774, 878, 1179
Bpu10I	CCTNAGC	2 cut(s)	696, 1335
BpuMI	CCSGG	1 cut(s)	1307
BsaBI	GATNNNNATC	1 cut(s)	474
BsaJI	CCNNGG	6 cut(s)	27, 195, 209, 759, 901, 977
BsaWI	WCCGGW	3 cut(s)	119, 338, 734
Bsc4I	CCNNNNNNNGG	4 cut(s)	1004, 1073, 1312, 1347
Bse118I	RCCGGY	2 cut(s)	338, 990
Bse1I	ACTGG	4 cut(s)	638, 681, 811, 874
Bse21I	CCTNAGG	1 cut(s)	508
Bse3DI	GCAATG	2 cut(s)	154, 807
Bse8I	GATNNNNATC	1 cut(s)	474
BseAI	TCCGGA	1 cut(s)	119
BseBI	CCWGG	3 cut(s)	210, 760, 1112
BseDI	CCNNGG	6 cut(s)	27, 195, 209, 759, 901, 977
BseJI	GATNNNNATC	1 cut(s)	474
BseLI	CCNNNNNNNGG	4 cut(s)	1004, 1073, 1312, 1347
BseMI	GCAATG	2 cut(s)	154, 807
BseMII	CTCAG	2 cut(s)	1254, 1326
BseNI	ACTGG	4 cut(s)	638, 681, 811, 874
BseRI	GAGGAG	3 cut(s)	47, 50, 1236
BseSI	GKGCMC	2 cut(s)	931, 1387
BseXI	GCAGC	6 cut(s)	211, 244, 574, 608, 969, 1117
BsgI	GTGCAG	1 cut(s)	615
Bsh1285I	CGRYCG	1 cut(s)	949
BshFI	GGCC	7 cut(s)	277, 873, 990, 1008, 1146, 1243, 1340
BshTI	ACCGGT	1 cut(s)	338
BsiEI	CGRYCG	1 cut(s)	949
BsiHKAI	GWGCWC	3 cut(s)	338, 790, 1387
BsiHKCI	CYCGRG	1 cut(s)	329
BsiSI	CCGG	7 cut(s)	50, 120, 339, 735, 991, 1244, 1306
BslFI	GGGAC	2 cut(s)	665, 918
BslI	CCNNNNNNNGG	4 cut(s)	1004, 1073, 1312, 1347
BsmAI	GTCTC	3 cut(s)	732, 1168, 1366
BsmBI	CGTCTC	2 cut(s)	1168, 1366
BsmFI	GGGAC	2 cut(s)	665, 918
BsmI	GAATGC	1 cut(s)	1041
BsnI	GGCC	7 cut(s)	277, 873, 990, 1008, 1146, 1243, 1340
BsoBI	CYCGRG	1 cut(s)	329
Bsp1286I	GDGCHC	5 cut(s)	338, 717, 790, 931, 1387
Bsp13I	TCCGGA	1 cut(s)	119
Bsp143I	GATC	9 cut(s)	67, 190, 475, 512, 523, 946, 973, 1120, 1226
Bsp19I	CCATGG	1 cut(s)	901
BspACI	CCGC	4 cut(s)	255, 467, 1056, 1128
BspANI	GGCC	7 cut(s)	277, 873, 990, 1008, 1146, 1243, 1340
BspCNI	CTCAG	2 cut(s)	1255, 1327
BspEI	TCCGGA	1 cut(s)	119
BspHI	TCATGA	1 cut(s)	532
BspLI	GGNNCC	2 cut(s)	178, 1007
BspMAI	CTGCAG	1 cut(s)	987
BspPI	GGATC	5 cut(s)	185, 520, 968, 1115, 1234
BsrDI	GCAATG	2 cut(s)	154, 807
BsrFI	RCCGGY	2 cut(s)	338, 990
BsrI	ACTGG	4 cut(s)	638, 681, 811, 874
BssAI	RCCGGY	2 cut(s)	338, 990
BssECI	CCNNGG	6 cut(s)	27, 195, 209, 759, 901, 977
BssMI	GATC	9 cut(s)	67, 190, 475, 512, 523, 946, 973, 1120, 1226
BssNAI	GTATAC	1 cut(s)	316
BssT1I	CCWWGG	3 cut(s)	27, 195, 901
Bst1107I	GTATAC	1 cut(s)	316
Bst2UI	CCWGG	3 cut(s)	210, 760, 1112
Bst4CI	ACNGT	4 cut(s)	91, 464, 820, 839
Bst6I	CTCTTC	2 cut(s)	1174, 1364
BstC8I	GCNNGC	2 cut(s)	252, 717
BstDEI	CTNAG	6 cut(s)	134, 419, 508, 696, 1263, 1335
BstDSI	CCRYGG	1 cut(s)	901
BstKTI	GATC	9 cut(s)	70, 193, 478, 515, 526, 949, 976, 1123, 1229
BstMAI	GTCTC	3 cut(s)	732, 1168, 1366
BstMBI	GATC	9 cut(s)	67, 190, 475, 512, 523, 946, 973, 1120, 1226
BstMCI	CGRYCG	1 cut(s)	949
BstMWI	GCNNNNNNNGC	4 cut(s)	593, 596, 721, 1112
BstNI	CCWGG	3 cut(s)	210, 760, 1112
BstNSI	RCATGY	1 cut(s)	752
BstPAI	GACNNNNGTC	1 cut(s)	136
BstSCI	CCNGG	4 cut(s)	208, 758, 1110, 1305
BstSFI	CTRYAG	2 cut(s)	835, 983
BstSLI	GKGCMC	2 cut(s)	931, 1387
BstV1I	GCAGC	6 cut(s)	211, 244, 574, 608, 969, 1117
BstV2I	GAAGAC	2 cut(s)	87, 416
BstX2I	RGATCY	2 cut(s)	973, 1226
BstXI	CCANNNNNNTGG	2 cut(s)	607, 766
BstYI	RGATCY	2 cut(s)	973, 1226
BstZ17I	GTATAC	1 cut(s)	316
Bsu36I	CCTNAGG	1 cut(s)	508
BsuI	GTATCC	2 cut(s)	452, 1005
BsuRI	GGCC	7 cut(s)	277, 873, 990, 1008, 1146, 1243, 1340
BtgI	CCRYGG	1 cut(s)	901
BtgZI	GCGATG	1 cut(s)	78
BtrI	CACGTC	2 cut(s)	932, 1064
BtsIMutI	CAGTG	1 cut(s)	825
Cac8I	GCNNGC	2 cut(s)	252, 717
CciI	TCATGA	1 cut(s)	532
Cfr10I	RCCGGY	2 cut(s)	338, 990
Cfr13I	GGNCC	4 cut(s)	177, 728, 988, 1006
CseI	GACGC	1 cut(s)	1242
Csp6I	GTAC	3 cut(s)	206, 771, 1404
CspAI	ACCGGT	1 cut(s)	338
CspCI	CAANNNNNGTGG	2 cut(s)	147, 182
CviAII	CATG	7 cut(s)	415, 533, 620, 749, 902, 1036, 1142
CviQI	GTAC	3 cut(s)	206, 771, 1404
DdeI	CTNAG	6 cut(s)	134, 419, 508, 696, 1263, 1335
DpnI	GATC	9 cut(s)	69, 192, 477, 514, 525, 948, 975, 1122, 1228
DpnII	GATC	9 cut(s)	67, 190, 475, 512, 523, 946, 973, 1120, 1226
DrdI	GACNNNNNNGTC	1 cut(s)	823
DseDI	GACNNNNNNGTC	1 cut(s)	823
EaeI	YGGCCR	3 cut(s)	871, 1144, 1241
Eam1104I	CTCTTC	2 cut(s)	1174, 1364
EarI	CTCTTC	2 cut(s)	1174, 1364
Eco130I	CCWWGG	3 cut(s)	27, 195, 901
Eco24I	GRGCYC	1 cut(s)	717
Eco47I	GGWCC	2 cut(s)	177, 728
Eco57I	CTGAAG	1 cut(s)	365
Eco81I	CCTNAGG	1 cut(s)	508
Eco88I	CYCGRG	1 cut(s)	329
EcoO109I	RGGNCCY	1 cut(s)	1006
EcoRII	CCWGG	3 cut(s)	208, 758, 1110
EcoT14I	CCWWGG	3 cut(s)	27, 195, 901
EcoT38I	GRGCYC	1 cut(s)	717
ErhI	CCWWGG	3 cut(s)	27, 195, 901
Esp3I	CGTCTC	2 cut(s)	1168, 1366
FaeI	CATG	7 cut(s)	418, 536, 623, 752, 905, 1039, 1145
FalI	AAGNNNNNCTT	2 cut(s)	513, 545
FaqI	GGGAC	2 cut(s)	665, 918
FatI	CATG	7 cut(s)	414, 532, 619, 748, 901, 1035, 1141
FblI	GTMKAC	2 cut(s)	315, 834
Fnu4HI	GCNGC	8 cut(s)	225, 255, 258, 588, 597, 983, 1056, 1131
FriOI	GRGCYC	1 cut(s)	717
Fsp4HI	GCNGC	8 cut(s)	225, 255, 258, 588, 597, 983, 1056, 1131
FspBI	CTAG	3 cut(s)	401, 894, 1103
GluI	GCNGC	8 cut(s)	225, 255, 258, 588, 597, 983, 1056, 1131
GsuI	CTGGAG	4 cut(s)	621, 774, 878, 1179
HaeIII	GGCC	7 cut(s)	277, 873, 990, 1008, 1146, 1243, 1340
HapII	CCGG	7 cut(s)	50, 120, 339, 735, 991, 1244, 1306
HgaI	GACGC	1 cut(s)	1242
Hin1II	CATG	7 cut(s)	418, 536, 623, 752, 905, 1039, 1145
HincII	GTYRAC	2 cut(s)	83, 127
HindII	GTYRAC	2 cut(s)	83, 127
HindIII	AAGCTT	2 cut(s)	698, 722
HinfI	GANTC	5 cut(s)	23, 46, 281, 327, 1274
HpaII	CCGG	7 cut(s)	50, 120, 339, 735, 991, 1244, 1306
HphI	GGTGA	3 cut(s)	518, 683, 1364
Hpy166II	GTNNAC	6 cut(s)	83, 127, 316, 448, 835, 1385
Hpy188I	TCNGA	6 cut(s)	72, 706, 829, 978, 1071, 1264
Hpy8I	GTNNAC	6 cut(s)	83, 127, 316, 448, 835, 1385
Hpy99I	CGWCG	1 cut(s)	91
HpyAV	CCTTC	8 cut(s)	126, 156, 290, 539, 677, 1191, 1211, 1261
HpyCH4III	ACNGT	4 cut(s)	91, 464, 820, 839
HpyCH4IV	ACGT	2 cut(s)	931, 1063
HpyCH4V	TGCA	8 cut(s)	260, 596, 800, 985, 1041, 1133, 1292, 1385
HpyF10VI	GCNNNNNNNGC	4 cut(s)	593, 596, 721, 1112
HpyF3I	CTNAG	6 cut(s)	134, 419, 508, 696, 1263, 1335
HpySE526I	ACGT	2 cut(s)	931, 1063
Hsp92II	CATG	7 cut(s)	418, 536, 623, 752, 905, 1039, 1145
Kpn2I	TCCGGA	1 cut(s)	119
Kzo9I	GATC	9 cut(s)	67, 190, 475, 512, 523, 946, 973, 1120, 1226
LmnI	GCTCC	2 cut(s)	793, 859
Lsp1109I	GCAGC	6 cut(s)	211, 244, 574, 608, 969, 1117
LweI	GCATC	2 cut(s)	1040, 1142
MaeI	CTAG	3 cut(s)	401, 894, 1103
MaeII	ACGT	2 cut(s)	931, 1063
MaeIII	GTNAC	3 cut(s)	744, 919, 1084
MalI	GATC	9 cut(s)	69, 192, 477, 514, 525, 948, 975, 1122, 1228
MboI	GATC	9 cut(s)	67, 190, 475, 512, 523, 946, 973, 1120, 1226
MboII	GAAGA	6 cut(s)	87, 416, 533, 692, 1191, 1381
MfeI	CAATTG	2 cut(s)	362, 812
MflI	RGATCY	2 cut(s)	973, 1226
MhlI	GDGCHC	5 cut(s)	338, 717, 790, 931, 1387
MlsI	TGGCCA	1 cut(s)	1146
MluCI	AATT	8 cut(s)	219, 268, 345, 362, 812, 965, 1357, 1408
MluNI	TGGCCA	1 cut(s)	1146
MlyI	GAGTC	1 cut(s)	321
MmeI	TCCRAC	2 cut(s)	690, 807
Mox20I	TGGCCA	1 cut(s)	1146
MroI	TCCGGA	1 cut(s)	119
MroXI	GAANNNNTTC	1 cut(s)	687
MscI	TGGCCA	1 cut(s)	1146
MseI	TTAA	2 cut(s)	357, 1301
MslI	CAYNNNNRTG	3 cut(s)	531, 575, 1036
Msp20I	TGGCCA	1 cut(s)	1146
MspA1I	CMGCKG	2 cut(s)	257, 1130
MspI	CCGG	7 cut(s)	50, 120, 339, 735, 991, 1244, 1306
MspR9I	CCNGG	4 cut(s)	210, 760, 1112, 1307
MunI	CAATTG	2 cut(s)	362, 812
Mva1269I	GAATGC	1 cut(s)	1041
MvaI	CCWGG	3 cut(s)	210, 760, 1112
MwoI	GCNNNNNNNGC	4 cut(s)	593, 596, 721, 1112
NciI	CCSGG	1 cut(s)	1307
NcoI	CCATGG	1 cut(s)	901
NdeII	GATC	9 cut(s)	67, 190, 475, 512, 523, 946, 973, 1120, 1226
NlaIII	CATG	7 cut(s)	418, 536, 623, 752, 905, 1039, 1145
NlaIV	GGNNCC	2 cut(s)	178, 1007
NmuCI	GTSAC	2 cut(s)	744, 919
NspI	RCATGY	1 cut(s)	752
PaeR7I	CTCGAG	1 cut(s)	329
PagI	TCATGA	1 cut(s)	532
PciI	ACATGT	1 cut(s)	748
PctI	GAATGC	1 cut(s)	1041
PdmI	GAANNNNTTC	1 cut(s)	687
PfeI	GAWTC	4 cut(s)	23, 46, 281, 1274
PflFI	GACNNNGTC	1 cut(s)	91
PflMI	CCANNNNNTGG	1 cut(s)	1347
PinAI	ACCGGT	1 cut(s)	338
PkrI	GCNGC	8 cut(s)	226, 256, 259, 589, 598, 984, 1057, 1132
Ple19I	CGATCG	1 cut(s)	949
PleI	GAGTC	1 cut(s)	321
PpsI	GAGTC	1 cut(s)	321
PscI	ACATGT	1 cut(s)	748
PshAI	GACNNNNGTC	1 cut(s)	136
Psp6I	CCWGG	3 cut(s)	208, 758, 1110
PspGI	CCWGG	3 cut(s)	208, 758, 1110
PspN4I	GGNNCC	2 cut(s)	178, 1007
PspPI	GGNCC	4 cut(s)	177, 728, 988, 1006
PstI	CTGCAG	1 cut(s)	987
PsuI	RGATCY	2 cut(s)	973, 1226
PsyI	GACNNNGTC	1 cut(s)	91
PvuI	CGATCG	1 cut(s)	949
RsaI	GTAC	3 cut(s)	207, 772, 1405
RsaNI	GTAC	3 cut(s)	206, 771, 1404
RseI	CAYNNNNRTG	3 cut(s)	531, 575, 1036
SaqAI	TTAA	2 cut(s)	357, 1301
SatI	GCNGC	8 cut(s)	225, 255, 258, 588, 597, 983, 1056, 1131
Sau3AI	GATC	9 cut(s)	67, 190, 475, 512, 523, 946, 973, 1120, 1226
Sau96I	GGNCC	4 cut(s)	177, 728, 988, 1006
SchI	GAGTC	1 cut(s)	321
ScrFI	CCNGG	4 cut(s)	210, 760, 1112, 1307
SduI	GDGCHC	5 cut(s)	338, 717, 790, 931, 1387
SfaNI	GCATC	2 cut(s)	1040, 1142
SfcI	CTRYAG	2 cut(s)	835, 983
Sfr274I	CTCGAG	1 cut(s)	329
SinI	GGWCC	2 cut(s)	177, 728
SlaI	CTCGAG	1 cut(s)	329
SmiMI	CAYNNNNRTG	3 cut(s)	531, 575, 1036
SmlI	CTYRAG	1 cut(s)	329
SmoI	CTYRAG	1 cut(s)	329
Sse9I	AATT	8 cut(s)	219, 268, 345, 362, 812, 965, 1357, 1408
SsiI	CCGC	4 cut(s)	255, 467, 1056, 1128
SspMI	CTAG	3 cut(s)	401, 894, 1103
StyD4I	CCNGG	4 cut(s)	208, 758, 1110, 1305
StyI	CCWWGG	3 cut(s)	27, 195, 901
TaaI	ACNGT	4 cut(s)	91, 464, 820, 839
TaiI	ACGT	2 cut(s)	934, 1066
TaqI	TCGA	2 cut(s)	107, 330
TasI	AATT	8 cut(s)	219, 268, 345, 362, 812, 965, 1357, 1408
TauI	GCSGC	2 cut(s)	257, 1058
TfiI	GAWTC	4 cut(s)	23, 46, 281, 1274
Tru1I	TTAA	2 cut(s)	357, 1301
Tru9I	TTAA	2 cut(s)	357, 1301
TscAI	CASTG	1 cut(s)	825
TseFI	GTSAC	2 cut(s)	744, 919
TseI	GCWGC	6 cut(s)	224, 257, 587, 596, 982, 1130
Tsp45I	GTSAC	2 cut(s)	744, 919
TspDTI	ATGAA	3 cut(s)	277, 521, 593
TspRI	CASTG	1 cut(s)	825
Tth111I	GACNNNGTC	1 cut(s)	91
Van91I	CCANNNNNTGG	1 cut(s)	1347
VneI	GTGCAC	1 cut(s)	1383
VpaK11BI	GGWCC	2 cut(s)	177, 728
XapI	RAATTY	1 cut(s)	268
XceI	RCATGY	1 cut(s)	752
XcmI	CCANNNNNNNNNTGG	2 cut(s)	673, 1154
XhoI	CTCGAG	1 cut(s)	329
XmiI	GTMKAC	2 cut(s)	315, 834
XmnI	GAANNNNTTC	1 cut(s)	687
XspI	CTAG	3 cut(s)	401, 894, 1103

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.