Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0011741

Physical Location & Seq

Genomic Coordinates Reverse (-)

23625031 .. 23626548

Gene Structure 1518 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1230500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1518 bp

ATGGCGACGTGGGCAGCACTAGACTGCTCGGCCACGCAGCTGGCCGACCTCCTGGGGCCCAACTCCACCGGCGCAGCTCACTTCATCTGTGACCAAATCGCCGGCGTCTCCACCAAGCTCTCCGACACCGCCTACGCGGTCGACACCACCTACCTCCTCTTCTCTGCTTACCTTGTTTTCTCAATGCAGCTCGGGTTCGCCATGCTCTGCGCTGGCTCCGTCCGCGCAAAGAACACCATGAACATCATGCTCACCAACGTCCTCGACGCTGCCGCCGGCGGCCTCTTCTACTACCTCTTCGGATTCGCCTTCGCCTTCGGCGGCCCCTCCAACGGCTTCATCGGCCACCACTTCTTCGGCCTCAGCAAAGTCCCCTCCGCCACCGGTTTCGACTACAGCCACTTCCTCTACCAGTGGGCCTTTGCCATCGCCGCCGCCGGAATCACCAGCGGATCCATTGCCGAGAGGACTCAGTTCGTCGCCTACCTCATCTACTCCTCCTTTCTCACCGGCTTCGTCTACCCGGTCGTCTCGCACTGGTTCTGGTCAGTCGACGGCTGGGCTAGCGCCGGAAATACCGAAAACCTCTTATTCGGAACCGGAGTCATCGATTTTGCCGGGTCGGGTGTGGTCCATATGGTCGGAGGCATCGCCGGTCTCTGGGGAGCTTTCATCGAAGGCCCCCGAATGGGTCGGTTCGACCACTCCGGCCGCGCCGTCGCTCTCCGCGGACATAGCGCTTCTCTCGTTGTTCTCGGCACGTTTTTACTCTGGTTCGGATGGTACGGGTTCAACCCGGGTTCGTTTACCAAGATCCTGAGTCCTTACGGGTCATCCGGATCCTATTACGGTATGTGGTCAGCCGTGGGTCGGACCGCCGTCACCACAACTCTCGCCGGATGCACCGCCGCTCTCACCACTCTCTTCGGAAAAAGAATCCTATCCGGTCACTGGAACGTAACGGACGTTTGTAACGGTCTTCTGGGCGGATTCGCGGCGATAACGGCGGGATGCTCTGTTGTCGAACCGTGGGCGGCGATAGTATGCGGATTCGTCGCCGCTGTCGTTTTGATCTCGTGCAACAAATTGGCGGAGAAGTTGAAATACGACGACCCGCTGGAGGCGGCTCAGCTTCACGGTGGGTGCGGCGCGTGGGGGATTATTTTCACGGCGCTGTTTGCGACGGAGAAGTACGTGAACGAGGTGTATCCGGGAAAAGAGGGGCGGCCTTACGGGTTGTTTATGGGGGGCGGAGGGAAGCTGCTGGGGGCCCACTTGATCCAGATAGTGGTGATTATTGGGTGGGTGAGCGCTACGATGGGGCCCTTGTTCTATGTGCTGCACAAGCTGAAGCTGTTGAGGATCTCGGTTGAGGACGAAATGGCGGGTATGGATCTGACCCGGCACGGCGGGTTTGCTTACGTGTACCGCGACGATGAGGACTCGGAGAAGCCTAACATGATTCAGCTTAGAAAAGTAGTCGAACCAAATACTTCGTCCACGCCCCCGTCCGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0001763 GO:0003674 GO:0005215 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0005887 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0007275 GO:0008150 GO:0008324 GO:0008519 GO:0009506 GO:0009628 GO:0009653 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0009987 GO:0010015 GO:0010033 GO:0010101 GO:0010102 GO:0010311 GO:0015075 GO:0015695 GO:0015696 GO:0016020 GO:0016021 GO:0016043 GO:0022607 GO:0022622 GO:0022857 GO:0030054 GO:0031224 GO:0031226 GO:0032501 GO:0032502 GO:0033993 GO:0034220 GO:0034622 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043621 GO:0043933 GO:0044085 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0048364 GO:0048527 GO:0048528 GO:0048646 GO:0048731 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0051258 GO:0055044 GO:0055085 GO:0065003 GO:0071702 GO:0071705 GO:0071840 GO:0071944 GO:0072488 GO:0080167 GO:0080181 GO:0090696 GO:0090697 GO:0090698 GO:0097305 GO:0098655 GO:0099402 GO:1901700 GO:1905392 GO:1905393

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ammonium_transp

Protein Analysis

506

Amino Acids

53.84

Weight (kDa)

6.34

Isoelectric Point (pI)

18.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ammonium_transp	PF00909	51 - 474	1.3e-131	Ammonium Transporter Family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011741)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24290 AT3G24300 AT4G13510
fragaria_vesca	FvH4_4g05160
malus_domestica	MD13G1225400.v1.1 MD16G1230500.v1.1
prunus_persica	Prupe.1G052400_v2.0.a1
pyrus_communis	pycom13g19870 pycom13g19880
rosa_chinensis	RchiOBHm_Chr4g0396081
rosa_laevigata	RLG00000009574
rosa_multiflora	Rmu_sc0006325.1_g000013 Rmu_sc0015594.1_g000001
rosa_roxburghii	Rroxscaffold_5G00340880
rosa_rugosa	Rorug03G0352700
rosa_samantha	Rh4BG064000 Rh4CG070500 Rh4DG060800
rosa_wichuraiana	Rw4G005300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1288
AccBSI	CCGCTC	1 cut(s)	911
AccI	GTMKAC	3 cut(s)	141, 519, 552
AccII	CGCG	7 cut(s)	137, 225, 714, 729, 995, 1151, 1431
AccIII	TCCGGA	1 cut(s)	836
AclWI	GGATC	8 cut(s)	447, 460, 808, 834, 847, 1273, 1370, 1401
AcoI	YGGCCR	4 cut(s)	30, 42, 343, 709
AcuI	CTGAAG	1 cut(s)	1370
AcyI	GRCGYC	1 cut(s)	105
AfaI	GTAC	3 cut(s)	785, 1193, 1427
AfeI	AGCGCT	2 cut(s)	739, 1312
AfiI	CCNNNNNNNGG	8 cut(s)	332, 660, 688, 689, 870, 951, 1120, 1288
AflIII	ACRYGT	1 cut(s)	1422
AgeI	ACCGGT	1 cut(s)	383
AgsI	TTSAA	2 cut(s)	793, 1102
AjiI	CACGTC	1 cut(s)	9
AjnI	CCWGG	1 cut(s)	51
Alw26I	GTCTC	3 cut(s)	112, 535, 662
AlwI	GGATC	8 cut(s)	447, 460, 808, 834, 847, 1273, 1370, 1401
Ama87I	CYCGRG	2 cut(s)	191, 796
Aor13HI	TCCGGA	1 cut(s)	836
Aor51HI	AGCGCT	2 cut(s)	739, 1312
ApaI	GGGCCC	3 cut(s)	60, 1273, 1326
ApeKI	GCWGC	7 cut(s)	14, 37, 74, 187, 269, 1261, 1339
ArsI	GACNNNNNNTTYG	2 cut(s)	1481, 1513
AsiGI	ACCGGT	1 cut(s)	383
AspLEI	GCGC	9 cut(s)	74, 212, 227, 569, 716, 740, 1151, 1174, 1313
AsuC2I	CCSGG	6 cut(s)	524, 619, 797, 798, 1212, 1402
AsuHPI	GGTGA	7 cut(s)	244, 436, 499, 874, 907, 1303, 1318
AsuNHI	GCTAGC	1 cut(s)	563
AvaI	CYCGRG	2 cut(s)	191, 796
AvaII	GGWCC	2 cut(s)	631, 873
BaeGI	GKGCMC	3 cut(s)	60, 1273, 1326
BamHI	GGATCC	2 cut(s)	452, 839
BanII	GRGCYC	3 cut(s)	60, 1273, 1326
BarI	GAAGNNNNNNTAC	2 cut(s)	1088, 1120
BauI	CACGAG	1 cut(s)	1075
BbsI	GAAGAC	1 cut(s)	971
BbvCI	CCTCAGC	1 cut(s)	362
BbvI	GCAGC	7 cut(s)	26, 49, 86, 199, 256, 1248, 1326
BccI	CCATC	3 cut(s)	434, 774, 1312
BceAI	ACGGC	8 cut(s)	349, 571, 701, 848, 863, 1020, 1185, 1423
BciT130I	CCWGG	1 cut(s)	53
BciVI	GTATCC	1 cut(s)	1218
BcnI	CCSGG	6 cut(s)	524, 619, 797, 798, 1212, 1402
BcoDI	GTCTC	3 cut(s)	112, 535, 662
BfaI	CTAG	2 cut(s)	20, 564
BfmI	CTRYAG	1 cut(s)	394
BfoI	RGCGCY	4 cut(s)	570, 741, 1175, 1314
BfuI	GTATCC	1 cut(s)	1218
BlpI	GCTNAGC	1 cut(s)	1128
Bme1390I	CCNGG	7 cut(s)	53, 524, 619, 797, 798, 1212, 1402
Bme18I	GGWCC	2 cut(s)	631, 873
BmeT110I	CYCGRG	2 cut(s)	191, 796
BmgBI	CACGTC	1 cut(s)	9
BmrFI	CCNGG	7 cut(s)	53, 524, 619, 797, 798, 1212, 1402
BmsI	GCATC	3 cut(s)	657, 890, 1001
BmtI	GCTAGC	1 cut(s)	567
BoxI	GACNNNNGTC	1 cut(s)	878
BpiI	GAAGAC	1 cut(s)	971
BpmI	CTGGAG	1 cut(s)	1139
Bpu10I	CCTNAGC	1 cut(s)	362
Bpu1102I	GCTNAGC	1 cut(s)	1128
BpuMI	CCSGG	6 cut(s)	524, 619, 797, 798, 1212, 1402
Bsa29I	ATCGAT	1 cut(s)	609
BsaAI	YACGTR	2 cut(s)	1195, 1423
BsaHI	GRCGYC	1 cut(s)	105
BsaI	GGTCTC	1 cut(s)	662
BsaJI	CCNNGG	5 cut(s)	52, 727, 796, 864, 1028
BsaWI	WCCGGW	4 cut(s)	383, 599, 836, 944
Bsc4I	CCNNNNNNNGG	8 cut(s)	332, 660, 688, 689, 870, 951, 1120, 1288
Bse118I	RCCGGY	6 cut(s)	68, 101, 275, 383, 509, 653
Bse1I	ACTGG	3 cut(s)	412, 542, 956
Bse3DI	GCAATG	1 cut(s)	456
BseAI	TCCGGA	1 cut(s)	836
BseBI	CCWGG	1 cut(s)	53
BseCI	ATCGAT	1 cut(s)	609
BseDI	CCNNGG	5 cut(s)	52, 727, 796, 864, 1028
BseGI	GGATG	4 cut(s)	785, 833, 905, 1016
BseLI	CCNNNNNNNGG	8 cut(s)	332, 660, 688, 689, 870, 951, 1120, 1288
BseMI	GCAATG	1 cut(s)	456
BseMII	CTCAG	4 cut(s)	376, 485, 809, 1142
BseNI	ACTGG	3 cut(s)	412, 542, 956
BseRI	GAGGAG	2 cut(s)	146, 487
BseSI	GKGCMC	3 cut(s)	60, 1273, 1326
BseX3I	CGGCCG	1 cut(s)	709
BseXI	GCAGC	7 cut(s)	26, 49, 86, 199, 256, 1248, 1326
BseYI	CCCAGC	2 cut(s)	558, 1264
BsgI	GTGCAG	1 cut(s)	1325
Bsh1236I	CGCG	7 cut(s)	137, 225, 714, 729, 995, 1151, 1431
Bsh1285I	CGRYCG	3 cut(s)	141, 528, 712
BshTI	ACCGGT	1 cut(s)	383
BshVI	ATCGAT	1 cut(s)	609
BsiEI	CGRYCG	3 cut(s)	141, 528, 712
BsiHKCI	CYCGRG	2 cut(s)	191, 796
BslFI	GGGAC	1 cut(s)	356
BslI	CCNNNNNNNGG	8 cut(s)	332, 660, 688, 689, 870, 951, 1120, 1288
BsmAI	GTCTC	3 cut(s)	112, 535, 662
BsmBI	CGTCTC	2 cut(s)	112, 535
BsmFI	GGGAC	1 cut(s)	356
Bso31I	GGTCTC	1 cut(s)	662
BsoBI	CYCGRG	2 cut(s)	191, 796
Bsp120I	GGGCCC	3 cut(s)	56, 1269, 1322
Bsp1286I	GDGCHC	3 cut(s)	60, 1273, 1326
Bsp13I	TCCGGA	1 cut(s)	836
Bsp143I	GATC	7 cut(s)	452, 813, 839, 1071, 1278, 1362, 1393
Bsp1720I	GCTNAGC	1 cut(s)	1128
BspCNI	CTCAG	4 cut(s)	375, 484, 810, 1141
BspDI	ATCGAT	1 cut(s)	609
BspEI	TCCGGA	1 cut(s)	836
BspFNI	CGCG	7 cut(s)	137, 225, 714, 729, 995, 1151, 1431
BspOI	GCTAGC	1 cut(s)	567
BspPI	GGATC	8 cut(s)	447, 460, 808, 834, 847, 1273, 1370, 1401
BspTNI	GGTCTC	1 cut(s)	662
BsrBI	CCGCTC	1 cut(s)	911
BsrDI	GCAATG	1 cut(s)	456
BsrFI	RCCGGY	6 cut(s)	68, 101, 275, 383, 509, 653
BsrI	ACTGG	3 cut(s)	412, 542, 956
BssAI	RCCGGY	6 cut(s)	68, 101, 275, 383, 509, 653
BssECI	CCNNGG	5 cut(s)	52, 727, 796, 864, 1028
BssMI	GATC	7 cut(s)	452, 813, 839, 1071, 1278, 1362, 1393
BssNI	GRCGYC	1 cut(s)	105
BssSI	CACGAG	1 cut(s)	1075
Bst2BI	CACGAG	1 cut(s)	1075
Bst2UI	CCWGG	1 cut(s)	53
Bst4CI	ACNGT	4 cut(s)	851, 977, 1029, 1139
Bst6I	CTCTTC	4 cut(s)	164, 290, 302, 929
BstACI	GRCGYC	1 cut(s)	105
BstBAI	YACGTR	2 cut(s)	1195, 1423
BstC8I	GCNNGC	5 cut(s)	42, 103, 214, 277, 565
BstDEI	CTNAG	5 cut(s)	362, 471, 818, 1128, 1469
BstDSI	CCRYGG	3 cut(s)	727, 864, 1028
BstF5I	GGATG	4 cut(s)	785, 833, 905, 1016
BstFNI	CGCG	7 cut(s)	137, 225, 714, 729, 995, 1151, 1431
BstH2I	RGCGCY	4 cut(s)	570, 741, 1175, 1314
BstHHI	GCGC	9 cut(s)	74, 212, 227, 569, 716, 740, 1151, 1174, 1313
BstKTI	GATC	7 cut(s)	455, 816, 842, 1074, 1281, 1365, 1396
BstMAI	GTCTC	3 cut(s)	112, 535, 662
BstMBI	GATC	7 cut(s)	452, 813, 839, 1071, 1278, 1362, 1393
BstMCI	CGRYCG	3 cut(s)	141, 528, 712
BstMWI	GCNNNNNNNGC	9 cut(s)	11, 222, 342, 431, 564, 735, 1004, 1178, 1345
BstNI	CCWGG	1 cut(s)	53
BstPAI	GACNNNNGTC	1 cut(s)	878
BstSCI	CCNGG	7 cut(s)	51, 522, 617, 795, 796, 1210, 1400
BstSFI	CTRYAG	1 cut(s)	394
BstSLI	GKGCMC	3 cut(s)	60, 1273, 1326
BstUI	CGCG	7 cut(s)	137, 225, 714, 729, 995, 1151, 1431
BstV1I	GCAGC	7 cut(s)	26, 49, 86, 199, 256, 1248, 1326
BstV2I	GAAGAC	1 cut(s)	971
BstX2I	RGATCY	5 cut(s)	452, 813, 839, 1362, 1393
BstXI	CCANNNNNNTGG	1 cut(s)	40
BstYI	RGATCY	5 cut(s)	452, 813, 839, 1362, 1393
BstZI	CGGCCG	1 cut(s)	709
Bsu15I	ATCGAT	1 cut(s)	609
BsuI	GTATCC	1 cut(s)	1218
BsuTUI	ATCGAT	1 cut(s)	609
BtgI	CCRYGG	3 cut(s)	727, 864, 1028
BtgZI	GCGATG	2 cut(s)	412, 634
BtrI	CACGTC	1 cut(s)	9
BtsCI	GGATG	4 cut(s)	785, 833, 905, 1016
BtsIMutI	CAGTG	3 cut(s)	419, 535, 949
Cac8I	GCNNGC	5 cut(s)	42, 103, 214, 277, 565
CfoI	GCGC	9 cut(s)	74, 212, 227, 569, 716, 740, 1151, 1174, 1313
Cfr10I	RCCGGY	6 cut(s)	68, 101, 275, 383, 509, 653
Cfr42I	CCGCGG	1 cut(s)	730
Cfr9I	CCCGGG	1 cut(s)	796
ClaI	ATCGAT	1 cut(s)	609
CpoI	CGGWCCG	1 cut(s)	873
CseI	GACGC	2 cut(s)	94, 275
Csp6I	GTAC	3 cut(s)	784, 1192, 1426
CspAI	ACCGGT	1 cut(s)	383
CspI	CGGWCCG	1 cut(s)	873
CviAII	CATG	4 cut(s)	202, 238, 247, 1459
CviQI	GTAC	3 cut(s)	784, 1192, 1426
DdeI	CTNAG	5 cut(s)	362, 471, 818, 1128, 1469
DpnI	GATC	7 cut(s)	454, 815, 841, 1073, 1280, 1364, 1395
DpnII	GATC	7 cut(s)	452, 813, 839, 1071, 1278, 1362, 1393
EaeI	YGGCCR	4 cut(s)	30, 42, 343, 709
EagI	CGGCCG	1 cut(s)	709
Eam1104I	CTCTTC	4 cut(s)	164, 290, 302, 929
EarI	CTCTTC	4 cut(s)	164, 290, 302, 929
EciI	GGCGGA	4 cut(s)	367, 1002, 1106, 1266
EclXI	CGGCCG	1 cut(s)	709
Eco24I	GRGCYC	3 cut(s)	60, 1273, 1326
Eco31I	GGTCTC	1 cut(s)	662
Eco47I	GGWCC	2 cut(s)	631, 873
Eco47III	AGCGCT	2 cut(s)	739, 1312
Eco52I	CGGCCG	1 cut(s)	709
Eco57I	CTGAAG	1 cut(s)	1370
Eco88I	CYCGRG	2 cut(s)	191, 796
EcoO109I	RGGNCCY	5 cut(s)	56, 680, 1269, 1322, 1323
EcoRII	CCWGG	1 cut(s)	51
EcoT38I	GRGCYC	3 cut(s)	60, 1273, 1326
Esp3I	CGTCTC	2 cut(s)	112, 535
FaeI	CATG	4 cut(s)	205, 241, 250, 1462
FaqI	GGGAC	1 cut(s)	356
FatI	CATG	4 cut(s)	201, 237, 246, 1458
FauI	CCCGC	4 cut(s)	1000, 1122, 1378, 1403
FauNDI	CATATG	1 cut(s)	636
FblI	GTMKAC	3 cut(s)	141, 519, 552
FokI	GGATG	4 cut(s)	792, 820, 912, 1023
FriOI	GRGCYC	3 cut(s)	60, 1273, 1326
FspBI	CTAG	2 cut(s)	20, 564
GlaI	GCGC	9 cut(s)	73, 211, 226, 568, 715, 739, 1150, 1173, 1312
GsaI	CCCAGC	2 cut(s)	562, 1268
GsuI	CTGGAG	1 cut(s)	1139
HaeII	RGCGCY	4 cut(s)	570, 741, 1175, 1314
HgaI	GACGC	2 cut(s)	94, 275
HhaI	GCGC	9 cut(s)	74, 212, 227, 569, 716, 740, 1151, 1174, 1313
Hin1I	GRCGYC	1 cut(s)	105
Hin1II	CATG	4 cut(s)	205, 241, 250, 1462
Hin6I	GCGC	9 cut(s)	72, 210, 225, 567, 714, 738, 1149, 1172, 1311
HinP1I	GCGC	9 cut(s)	72, 210, 225, 567, 714, 738, 1149, 1172, 1311
HincII	GTYRAC	2 cut(s)	142, 553
HindII	GTYRAC	2 cut(s)	142, 553
HphI	GGTGA	7 cut(s)	244, 436, 499, 874, 907, 1303, 1318
Hpy166II	GTNNAC	7 cut(s)	142, 520, 553, 807, 1198, 1426, 1500
Hpy188I	TCNGA	9 cut(s)	124, 302, 596, 644, 779, 873, 929, 1398, 1447
Hpy188III	TCNNGA	3 cut(s)	817, 837, 1282
Hpy8I	GTNNAC	7 cut(s)	142, 520, 553, 807, 1198, 1426, 1500
Hpy99I	CGWCG	9 cut(s)	10, 269, 482, 557, 722, 1058, 1112, 1186, 1436
HpyAV	CCTTC	3 cut(s)	319, 325, 671
HpyCH4III	ACNGT	4 cut(s)	851, 977, 1029, 1139
HpyCH4IV	ACGT	7 cut(s)	8, 258, 761, 957, 966, 1194, 1422
HpyCH4V	TGCA	4 cut(s)	187, 903, 1080, 1342
HpyF10VI	GCNNNNNNNGC	9 cut(s)	11, 222, 342, 431, 564, 735, 1004, 1178, 1345
HpyF3I	CTNAG	5 cut(s)	362, 471, 818, 1128, 1469
HpySE526I	ACGT	7 cut(s)	8, 258, 761, 957, 966, 1194, 1422
Hsp92I	GRCGYC	1 cut(s)	105
Hsp92II	CATG	4 cut(s)	205, 241, 250, 1462
HspAI	GCGC	9 cut(s)	72, 210, 225, 567, 714, 738, 1149, 1172, 1311
Kpn2I	TCCGGA	1 cut(s)	836
KroI	GCCGGC	2 cut(s)	101, 275
KroNI	GCCGGC	2 cut(s)	103, 277
KspI	CCGCGG	1 cut(s)	730
Kzo9I	GATC	7 cut(s)	452, 813, 839, 1071, 1278, 1362, 1393
LmnI	GCTCC	2 cut(s)	221, 665
Lsp1109I	GCAGC	7 cut(s)	26, 49, 86, 199, 256, 1248, 1326
LweI	GCATC	3 cut(s)	657, 890, 1001
MaeI	CTAG	2 cut(s)	20, 564
MaeII	ACGT	7 cut(s)	8, 258, 761, 957, 966, 1194, 1422
MaeIII	GTNAC	5 cut(s)	89, 880, 947, 958, 971
MalI	GATC	7 cut(s)	454, 815, 841, 1073, 1280, 1364, 1395
MbiI	CCGCTC	1 cut(s)	911
MboI	GATC	7 cut(s)	452, 813, 839, 1071, 1278, 1362, 1393
MboII	GAAGA	6 cut(s)	151, 277, 289, 346, 916, 971
MflI	RGATCY	5 cut(s)	452, 813, 839, 1362, 1393
MhlI	GDGCHC	3 cut(s)	60, 1273, 1326
MluCI	AATT	1 cut(s)	1085
MlyI	GAGTC	4 cut(s)	463, 612, 829, 1436
MmeI	TCCRAC	4 cut(s)	147, 354, 622, 851
MreI	CGCCGGCG	2 cut(s)	101, 275
MroI	TCCGGA	1 cut(s)	836
MroNI	GCCGGC	2 cut(s)	101, 275
MspA1I	CMGCKG	5 cut(s)	40, 450, 729, 1061, 1117
MspR9I	CCNGG	7 cut(s)	53, 524, 619, 797, 798, 1212, 1402
MvaI	CCWGG	1 cut(s)	53
MvnI	CGCG	7 cut(s)	137, 225, 714, 729, 995, 1151, 1431
MwoI	GCNNNNNNNGC	9 cut(s)	11, 222, 342, 431, 564, 735, 1004, 1178, 1345
NaeI	GCCGGC	2 cut(s)	103, 277
NciI	CCSGG	6 cut(s)	524, 619, 797, 798, 1212, 1402
NdeI	CATATG	1 cut(s)	636
NdeII	GATC	7 cut(s)	452, 813, 839, 1071, 1278, 1362, 1393
NgoMIV	GCCGGC	2 cut(s)	101, 275
NheI	GCTAGC	1 cut(s)	563
NlaIII	CATG	4 cut(s)	205, 241, 250, 1462
NmeAIII	GCCGAG	3 cut(s)	8, 487, 735
NmuCI	GTSAC	3 cut(s)	89, 880, 947
PcsI	WCGNNNNNNNCGW	3 cut(s)	963, 1062, 1428
PdiI	GCCGGC	2 cut(s)	103, 277
PfeI	GAWTC	6 cut(s)	303, 441, 936, 990, 1050, 1462
PflMI	CCANNNNNTGG	1 cut(s)	1288
PfoI	TCCNGGA	1 cut(s)	1210
PinAI	ACCGGT	1 cut(s)	383
PleI	GAGTC	4 cut(s)	463, 611, 828, 1436
PpsI	GAGTC	4 cut(s)	463, 611, 828, 1436
Ppu21I	YACGTR	2 cut(s)	1195, 1423
PshAI	GACNNNNGTC	1 cut(s)	878
Psp6I	CCWGG	1 cut(s)	51
PspFI	CCCAGC	2 cut(s)	558, 1264
PspGI	CCWGG	1 cut(s)	51
PspOMI	GGGCCC	3 cut(s)	56, 1269, 1322
PsuI	RGATCY	5 cut(s)	452, 813, 839, 1362, 1393
PvuII	CAGCTG	1 cut(s)	40
RsaI	GTAC	3 cut(s)	785, 1193, 1427
RsaNI	GTAC	3 cut(s)	784, 1192, 1426
Rsr2I	CGGWCCG	1 cut(s)	873
RsrII	CGGWCCG	1 cut(s)	873
SacII	CCGCGG	1 cut(s)	730
SalI	GTCGAC	2 cut(s)	140, 551
Sau3AI	GATC	7 cut(s)	452, 813, 839, 1071, 1278, 1362, 1393
SchI	GAGTC	4 cut(s)	463, 612, 829, 1436
ScrFI	CCNGG	7 cut(s)	53, 524, 619, 797, 798, 1212, 1402
SduI	GDGCHC	3 cut(s)	60, 1273, 1326
SfaNI	GCATC	3 cut(s)	657, 890, 1001
SfcI	CTRYAG	1 cut(s)	394
Sfr303I	CCGCGG	1 cut(s)	730
SgrAI	CRCCGGYG	3 cut(s)	68, 101, 275
SgrBI	CCGCGG	1 cut(s)	730
SinI	GGWCC	2 cut(s)	631, 873
SmaI	CCCGGG	1 cut(s)	798
Sse9I	AATT	1 cut(s)	1085
SspMI	CTAG	2 cut(s)	20, 564
StyD4I	CCNGG	7 cut(s)	51, 522, 617, 795, 796, 1210, 1400
TaaI	ACNGT	4 cut(s)	851, 977, 1029, 1139
TaiI	ACGT	7 cut(s)	11, 261, 764, 960, 969, 1197, 1425
TaqI	TCGA	9 cut(s)	141, 264, 390, 552, 609, 675, 699, 1023, 1482
TasI	AATT	1 cut(s)	1085
TfiI	GAWTC	6 cut(s)	303, 441, 936, 990, 1050, 1462
TscAI	CASTG	3 cut(s)	419, 542, 956
TseFI	GTSAC	3 cut(s)	89, 880, 947
TseI	GCWGC	7 cut(s)	14, 37, 74, 187, 269, 1261, 1339
Tsp45I	GTSAC	3 cut(s)	89, 880, 947
TspDTI	ATGAA	4 cut(s)	73, 254, 328, 661
TspGWI	ACGGA	4 cut(s)	208, 977, 1199, 1501
TspMI	CCCGGG	1 cut(s)	796
TspRI	CASTG	3 cut(s)	419, 542, 956
Van91I	CCANNNNNTGG	1 cut(s)	1288
VpaK11BI	GGWCC	2 cut(s)	631, 873
XmaI	CCCGGG	1 cut(s)	796
XmiI	GTMKAC	3 cut(s)	141, 519, 552
XspI	CTAG	2 cut(s)	20, 564

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.