Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0011741

Physical Location & Seq

Genomic Coordinates Forward (+)

9173947 .. 9176762

Gene Structure 2816 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG060800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1494 bp

ATGGCGTCTCTGTCCTGCTCGGCTCCCGAGCTGGCCCAACTGCTGGGCCCAAACAGCACCGCCGCCGCCACCTTCATCTGCGACCAATTCTCCGCCGTCGACTCCAAGTTCGTTGACACCTCCTACGCCATCGACACCACCTACCTCCTCTTCTCCGCCTACCTCGTCTTCTCCATGCAGCTCGGCTTCGCCATGCTCTGCGCCGGCTCCGTCCGCGCTAAGAACACCATGAACATCATGCTCACCAACGTCCTCGACGCTGCCGCCGGCGGCCTCTTCTACTACCTCTTCGGCTTCGCCTTCGCCTTCGGCGGCCCCTCCAACGGCTTCATCGGCCGCCACTTCTTCGGCCTCAAGGAAGTCCCCAACTCCTCCTTCGACTACAGCCACTTCCTCTACCAATGGGCCTTCGCCATCGCCGCCGCCGGCATCACCTCCGGCTCCATCGCCGAGCGGACTCAGTTCGTCGCTTACTTAATCTACTCCTCCTTCCTCACCGGCTTCGTCTACCCCGTCGTCTCCCACTGGATCTGGTCCGCCGACGGCTGGGCCAGCGCCTTCAACACCGGTAACCTCCTGTTCGGATCCGGAGTCATCGACTTCGCCGGCTCCGGCGTCGTCCACATGGTCGGAGGCATCGCCGGCCTCTGGGGAGCTTATATCGAAGGTCCGAGAATCGGCCGGTTCGACCATTCCGGTCGCTCCGTCGCTCTCCGGGGCCACAGCGCCACCCTCGTCGTTCTCGGCACCTTTCTTCTCTGGTTCGGGTGGTACGGGTTCAACCCGGGTTCGTTTAACAAGATCCTAGTCTCCTACGGCTTCACCTACTACGGCCAGTGGTCCGCCGTCGGAAGAACCGCCGTCACCACCACTCTCGCCGGCTGCACCGCCGCGCTCACGACTCTCTTCGGGAAGAGAATCCTCTCCGGCCACTGGAACGTCACCGACGTCTGCAACGGCCTGCTCGGCGGCTTCGCTGCCATCACCTCCGGCTGCTCCGTCGTCGAGCCCTGGGCCGCGATCATCTGCGGGTTCGTCGCCGCCGTCGTCTTATGCGCCTGCAACAAACTCGCCGAGAAGGTCAAGTACGACGACCCCTTGGAGGCGGCTCAGCTCCACGGCGGGTGCGGCGCGTGGGGGATCATATTCACCGCGCTTTTCGCGAGCAAGAAGTACGTGAACGAAGTGTACCCGGGTGTACCGGGTCGACCCTATGGGCTGTTCATGGGCGGCGGAGGCAAGCTGTTGGGGGCCCATTTGATCCAGATTCTGGTGATCACCGGGTGGGTCAGCGCCACCATGGGCCCTCTGTTCTTCATTCTTCACAAGCTTAAGCTGCTGAGGATTTCGGCCGAGGATGAAATGGCGGGTATGGATATGACCCGGCACGGTGGGTTTGCTTACGCCTACCATGACGAAGACGACGCGGTTAAACCGGCCGGGATTCAACTTAGAAAAGTAGAGCCGAACTCTTCCACACCCACTTCCGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0001763 GO:0003674 GO:0005215 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0005887 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0007275 GO:0008150 GO:0008324 GO:0008519 GO:0009506 GO:0009628 GO:0009653 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0009987 GO:0010015 GO:0010033 GO:0010101 GO:0010102 GO:0010311 GO:0015075 GO:0015695 GO:0015696 GO:0016020 GO:0016021 GO:0016043 GO:0022607 GO:0022622 GO:0022857 GO:0030054 GO:0031224 GO:0031226 GO:0032501 GO:0032502 GO:0033993 GO:0034220 GO:0034622 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043621 GO:0043933 GO:0044085 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0048364 GO:0048527 GO:0048528 GO:0048646 GO:0048731 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0051258 GO:0055044 GO:0055085 GO:0065003 GO:0071702 GO:0071705 GO:0071840 GO:0071944 GO:0072488 GO:0080167 GO:0080181 GO:0090696 GO:0090697 GO:0090698 GO:0097305 GO:0098655 GO:0099402 GO:1901700 GO:1905392 GO:1905393

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ammonium_transp

Protein Analysis

497

Amino Acids

53.06

Weight (kDa)

6.85

Isoelectric Point (pI)

23.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ammonium_transp	PF00909	48 - 468	4.3e-132	Ammonium Transporter Family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011741)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24290 AT3G24300 AT4G13510
fragaria_vesca	FvH4_4g05160
malus_domestica	MD13G1225400.v1.1 MD16G1230500.v1.1
prunus_persica	Prupe.1G052400_v2.0.a1
pyrus_communis	pycom13g19870 pycom13g19880
rosa_chinensis	RchiOBHm_Chr4g0396081
rosa_laevigata	RLG00000009574
rosa_multiflora	Rmu_sc0006325.1_g000013 Rmu_sc0015594.1_g000001
rosa_roxburghii	Rroxscaffold_5G00340880
rosa_rugosa	Rorug03G0352700
rosa_samantha	Rh4BG064000 Rh4CG070500 Rh4DG060800
rosa_wichuraiana	Rw4G005300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	951
AccB1I	GGYRCC	1 cut(s)	746
AccB7I	CCANNNNNTGG	2 cut(s)	43, 1270
AccBSI	CCGCTC	1 cut(s)	454
AccI	GTMKAC	3 cut(s)	99, 507, 1207
AccII	CGCG	7 cut(s)	216, 893, 1019, 1133, 1154, 1163, 1427
AccIII	TCCGGA	1 cut(s)	587
AclWI	GGATC	6 cut(s)	536, 579, 592, 796, 1148, 1255
AcoI	YGGCCR	6 cut(s)	334, 679, 832, 928, 1350, 1437
AcyI	GRCGYC	3 cut(s)	5, 615, 948
AdeI	CACNNNGTG	1 cut(s)	1284
AfaI	GTAC	5 cut(s)	773, 1088, 1175, 1190, 1200
AfiI	CCNNNNNNNGG	8 cut(s)	43, 323, 546, 648, 677, 933, 1102, 1270
AflII	CTTAAG	1 cut(s)	1331
AgeI	ACCGGT	1 cut(s)	566
AgsI	TTSAA	3 cut(s)	562, 781, 1448
AjnI	CCWGG	1 cut(s)	1010
AjuI	GAANNNNNNNTTGG	2 cut(s)	359, 391
AluBI	AGCT	7 cut(s)	31, 181, 656, 1114, 1243, 1330, 1336
AluI	AGCT	7 cut(s)	31, 181, 656, 1114, 1243, 1330, 1336
Alw26I	GTCTC	3 cut(s)	12, 523, 814
AlwI	GGATC	6 cut(s)	536, 579, 592, 796, 1148, 1255
AlwNI	CAGNNNCTG	1 cut(s)	1270
Ama87I	CYCGRG	3 cut(s)	26, 784, 1192
Aor13HI	TCCGGA	1 cut(s)	587
ApaI	GGGCCC	3 cut(s)	50, 1255, 1307
ApeKI	GCWGC	6 cut(s)	178, 260, 882, 977, 993, 1336
ArsI	GACNNNNNNTTYG	2 cut(s)	92, 124
AsiGI	ACCGGT	1 cut(s)	566
AspLEI	GCGC	9 cut(s)	203, 218, 557, 728, 895, 1058, 1133, 1156, 1295
AsuC2I	CCSGG	9 cut(s)	716, 785, 786, 1193, 1194, 1203, 1282, 1384, 1441
AvaI	CYCGRG	3 cut(s)	26, 784, 1192
AvaII	GGWCC	3 cut(s)	534, 668, 840
BaeGI	GKGCMC	3 cut(s)	50, 1255, 1307
BamHI	GGATCC	1 cut(s)	584
BanI	GGYRCC	1 cut(s)	746
BanII	GRGCYC	4 cut(s)	50, 1011, 1255, 1307
BarI	GAAGNNNNNNTAC	2 cut(s)	1070, 1102
BbsI	GAAGAC	2 cut(s)	160, 1425
BbvCI	CCTCAGC	1 cut(s)	1340
BbvI	GCAGC	6 cut(s)	190, 247, 869, 964, 980, 1323
BccI	CCATC	4 cut(s)	137, 422, 452, 989
BcgI	CGANNNNNNTGC	2 cut(s)	1051, 1085
BciT130I	CCWGG	1 cut(s)	1012
BclI	TGATCA	1 cut(s)	1275
BcnI	CCSGG	9 cut(s)	716, 785, 786, 1193, 1194, 1203, 1282, 1384, 1441
BcoDI	GTCTC	3 cut(s)	12, 523, 814
BfaI	CTAG	1 cut(s)	806
BfmI	CTRYAG	1 cut(s)	382
BfoI	RGCGCY	3 cut(s)	558, 729, 1296
BfrI	CTTAAG	1 cut(s)	1331
BglI	GCCNNNNNGGC	1 cut(s)	966
BlpI	GCTNAGC	1 cut(s)	1110
Bme18I	GGWCC	3 cut(s)	534, 668, 840
BmeT110I	CYCGRG	3 cut(s)	26, 784, 1192
BmsI	GCATC	2 cut(s)	438, 645
BpiI	GAAGAC	2 cut(s)	160, 1425
BplI	GAGNNNNNCTC	2 cut(s)	1454, 1486
Bpu10I	CCTNAGC	1 cut(s)	1340
Bpu1102I	GCTNAGC	1 cut(s)	1110
BpuEI	CTTGAG	1 cut(s)	338
BpuMI	CCSGG	9 cut(s)	716, 785, 786, 1193, 1194, 1203, 1282, 1384, 1441
BsaAI	YACGTR	1 cut(s)	1177
BsaHI	GRCGYC	3 cut(s)	5, 615, 948
BsaJI	CCNNGG	9 cut(s)	715, 784, 1010, 1011, 1098, 1117, 1192, 1299, 1353
BsaWI	WCCGGW	3 cut(s)	566, 587, 695
BsaXI	ACNNNNNCTCC	2 cut(s)	74, 104
Bsc4I	CCNNNNNNNGG	8 cut(s)	43, 323, 546, 648, 677, 933, 1102, 1270
Bse1I	ACTGG	3 cut(s)	530, 835, 938
BseAI	TCCGGA	1 cut(s)	587
BseBI	CCWGG	1 cut(s)	1012
BseDI	CCNNGG	9 cut(s)	715, 784, 1010, 1011, 1098, 1117, 1192, 1299, 1353
BseGI	GGATG	1 cut(s)	1363
BseLI	CCNNNNNNNGG	8 cut(s)	43, 323, 546, 648, 677, 933, 1102, 1270
BseMII	CTCAG	3 cut(s)	473, 1124, 1331
BseNI	ACTGG	3 cut(s)	530, 835, 938
BseRI	GAGGAG	3 cut(s)	137, 361, 475
BseSI	GKGCMC	3 cut(s)	50, 1255, 1307
BseX3I	CGGCCG	4 cut(s)	334, 679, 1350, 1437
BseXI	GCAGC	6 cut(s)	190, 247, 869, 964, 980, 1323
BseYI	CCCAGC	2 cut(s)	43, 546
BsgI	GTGCAG	1 cut(s)	868
Bsh1236I	CGCG	7 cut(s)	216, 893, 1019, 1133, 1154, 1163, 1427
Bsh1285I	CGRYCG	5 cut(s)	337, 682, 700, 1353, 1440
BshNI	GGYRCC	1 cut(s)	746
BshTI	ACCGGT	1 cut(s)	566
BsiEI	CGRYCG	5 cut(s)	337, 682, 700, 1353, 1440
BsiHKCI	CYCGRG	3 cut(s)	26, 784, 1192
BslFI	GGGAC	1 cut(s)	347
BslI	CCNNNNNNNGG	8 cut(s)	43, 323, 546, 648, 677, 933, 1102, 1270
BsmAI	GTCTC	3 cut(s)	12, 523, 814
BsmBI	CGTCTC	2 cut(s)	12, 523
BsmFI	GGGAC	1 cut(s)	347
BsoBI	CYCGRG	3 cut(s)	26, 784, 1192
Bsp120I	GGGCCC	3 cut(s)	46, 1251, 1303
Bsp1286I	GDGCHC	4 cut(s)	50, 1011, 1255, 1307
Bsp13I	TCCGGA	1 cut(s)	587
Bsp143I	GATC	7 cut(s)	528, 584, 801, 1020, 1140, 1260, 1275
Bsp1720I	GCTNAGC	1 cut(s)	1110
Bsp19I	CCATGG	1 cut(s)	1299
Bsp68I	TCGCGA	1 cut(s)	1163
BspCNI	CTCAG	3 cut(s)	472, 1123, 1332
BspEI	TCCGGA	1 cut(s)	587
BspFNI	CGCG	7 cut(s)	216, 893, 1019, 1133, 1154, 1163, 1427
BspPI	GGATC	6 cut(s)	536, 579, 592, 796, 1148, 1255
BspT107I	GGYRCC	1 cut(s)	746
BspTI	CTTAAG	1 cut(s)	1331
BsrBI	CCGCTC	1 cut(s)	454
BsrI	ACTGG	3 cut(s)	530, 835, 938
BssECI	CCNNGG	9 cut(s)	715, 784, 1010, 1011, 1098, 1117, 1192, 1299, 1353
BssMI	GATC	7 cut(s)	528, 584, 801, 1020, 1140, 1260, 1275
BssNI	GRCGYC	3 cut(s)	5, 615, 948
BssT1I	CCWWGG	2 cut(s)	1098, 1299
Bst2UI	CCWGG	1 cut(s)	1012
Bst4CI	ACNGT	1 cut(s)	1391
Bst6I	CTCTTC	6 cut(s)	155, 281, 293, 908, 911, 1477
BstACI	GRCGYC	3 cut(s)	5, 615, 948
BstAFI	CTTAAG	1 cut(s)	1331
BstBAI	YACGTR	1 cut(s)	1177
BstDEI	CTNAG	5 cut(s)	219, 459, 1110, 1340, 1451
BstDSI	CCRYGG	2 cut(s)	1117, 1299
BstEII	GGTNACC	1 cut(s)	569
BstF5I	GGATG	1 cut(s)	1363
BstFNI	CGCG	7 cut(s)	216, 893, 1019, 1133, 1154, 1163, 1427
BstH2I	RGCGCY	3 cut(s)	558, 729, 1296
BstHHI	GCGC	9 cut(s)	203, 218, 557, 728, 895, 1058, 1133, 1156, 1295
BstKTI	GATC	7 cut(s)	531, 587, 804, 1023, 1143, 1263, 1278
BstMAI	GTCTC	3 cut(s)	12, 523, 814
BstMBI	GATC	7 cut(s)	528, 584, 801, 1020, 1140, 1260, 1275
BstMCI	CGRYCG	5 cut(s)	337, 682, 700, 1353, 1440
BstNI	CCWGG	1 cut(s)	1012
BstPI	GGTNACC	1 cut(s)	569
BstSFI	CTRYAG	1 cut(s)	382
BstSLI	GKGCMC	3 cut(s)	50, 1255, 1307
BstUI	CGCG	7 cut(s)	216, 893, 1019, 1133, 1154, 1163, 1427
BstV1I	GCAGC	6 cut(s)	190, 247, 869, 964, 980, 1323
BstV2I	GAAGAC	2 cut(s)	160, 1425
BstX2I	RGATCY	3 cut(s)	528, 584, 801
BstYI	RGATCY	3 cut(s)	528, 584, 801
BstZI	CGGCCG	4 cut(s)	334, 679, 1350, 1437
BtgI	CCRYGG	2 cut(s)	1117, 1299
BtgZI	GCGATG	3 cut(s)	400, 430, 622
BtsCI	GGATG	1 cut(s)	1363
BtsIMutI	CAGTG	3 cut(s)	523, 842, 931
BtuMI	TCGCGA	1 cut(s)	1163
CaiI	CAGNNNCTG	1 cut(s)	1270
CfoI	GCGC	9 cut(s)	203, 218, 557, 728, 895, 1058, 1133, 1156, 1295
Cfr9I	CCCGGG	2 cut(s)	784, 1192
CseI	GACGC	3 cut(s)	266, 604, 1433
Csp6I	GTAC	5 cut(s)	772, 1087, 1174, 1189, 1199
CspAI	ACCGGT	1 cut(s)	566
CviAII	CATG	8 cut(s)	175, 193, 229, 238, 625, 1225, 1300, 1412
CviQI	GTAC	5 cut(s)	772, 1087, 1174, 1189, 1199
DdeI	CTNAG	5 cut(s)	219, 459, 1110, 1340, 1451
DpnI	GATC	7 cut(s)	530, 586, 803, 1022, 1142, 1262, 1277
DpnII	GATC	7 cut(s)	528, 584, 801, 1020, 1140, 1260, 1275
DraIII	CACNNNGTG	1 cut(s)	1284
EaeI	YGGCCR	6 cut(s)	334, 679, 832, 928, 1350, 1437
EagI	CGGCCG	4 cut(s)	334, 679, 1350, 1437
Eam1104I	CTCTTC	6 cut(s)	155, 281, 293, 908, 911, 1477
EarI	CTCTTC	6 cut(s)	155, 281, 293, 908, 911, 1477
EciI	GGCGGA	5 cut(s)	82, 145, 526, 832, 1248
EclXI	CGGCCG	4 cut(s)	334, 679, 1350, 1437
Eco130I	CCWWGG	2 cut(s)	1098, 1299
Eco24I	GRGCYC	4 cut(s)	50, 1011, 1255, 1307
Eco47I	GGWCC	3 cut(s)	534, 668, 840
Eco52I	CGGCCG	4 cut(s)	334, 679, 1350, 1437
Eco88I	CYCGRG	3 cut(s)	26, 784, 1192
Eco91I	GGTNACC	1 cut(s)	569
EcoO109I	RGGNCCY	2 cut(s)	1251, 1304
EcoO65I	GGTNACC	1 cut(s)	569
EcoRII	CCWGG	1 cut(s)	1010
EcoT14I	CCWWGG	2 cut(s)	1098, 1299
EcoT38I	GRGCYC	4 cut(s)	50, 1011, 1255, 1307
ErhI	CCWWGG	2 cut(s)	1098, 1299
Esp3I	CGTCTC	2 cut(s)	12, 523
FaeI	CATG	8 cut(s)	178, 196, 232, 241, 628, 1228, 1303, 1415
FaqI	GGGAC	1 cut(s)	347
FatI	CATG	8 cut(s)	174, 192, 228, 237, 624, 1224, 1299, 1411
FauI	CCCGC	3 cut(s)	1022, 1115, 1360
FbaI	TGATCA	1 cut(s)	1275
FblI	GTMKAC	3 cut(s)	99, 507, 1207
FokI	GGATG	1 cut(s)	1370
FriOI	GRGCYC	4 cut(s)	50, 1011, 1255, 1307
FspBI	CTAG	1 cut(s)	806
GlaI	GCGC	9 cut(s)	202, 217, 556, 727, 894, 1057, 1132, 1155, 1294
GsaI	CCCAGC	2 cut(s)	47, 550
HaeII	RGCGCY	3 cut(s)	558, 729, 1296
HgaI	GACGC	3 cut(s)	266, 604, 1433
HhaI	GCGC	9 cut(s)	203, 218, 557, 728, 895, 1058, 1133, 1156, 1295
Hin1I	GRCGYC	3 cut(s)	5, 615, 948
Hin1II	CATG	8 cut(s)	178, 196, 232, 241, 628, 1228, 1303, 1415
Hin6I	GCGC	9 cut(s)	201, 216, 555, 726, 893, 1056, 1131, 1154, 1293
HinP1I	GCGC	9 cut(s)	201, 216, 555, 726, 893, 1056, 1131, 1154, 1293
HincII	GTYRAC	3 cut(s)	100, 115, 1208
HindII	GTYRAC	3 cut(s)	100, 115, 1208
HindIII	AAGCTT	1 cut(s)	1328
HinfI	GANTC	8 cut(s)	101, 457, 591, 675, 901, 918, 1267, 1444
Hpy166II	GTNNAC	8 cut(s)	100, 115, 508, 622, 1180, 1189, 1199, 1208
Hpy188I	TCNGA	4 cut(s)	584, 632, 672, 851
Hpy188III	TCNNGA	6 cut(s)	26, 588, 898, 910, 1162, 1264
Hpy8I	GTNNAC	8 cut(s)	100, 115, 508, 622, 1180, 1189, 1199, 1208
HpyAV	CCTTC	9 cut(s)	82, 310, 316, 385, 418, 499, 568, 659, 1072
HpyCH4III	ACNGT	1 cut(s)	1391
HpyCH4IV	ACGT	4 cut(s)	249, 939, 948, 1176
HpyCH4V	TGCA	4 cut(s)	178, 885, 954, 1062
HpyF3I	CTNAG	5 cut(s)	219, 459, 1110, 1340, 1451
HpySE526I	ACGT	4 cut(s)	249, 939, 948, 1176
Hsp92I	GRCGYC	3 cut(s)	5, 615, 948
Hsp92II	CATG	8 cut(s)	178, 196, 232, 241, 628, 1228, 1303, 1415
HspAI	GCGC	9 cut(s)	201, 216, 555, 726, 893, 1056, 1131, 1154, 1293
Kpn2I	TCCGGA	1 cut(s)	587
KroI	GCCGGC	6 cut(s)	203, 266, 425, 605, 641, 878
KroNI	GCCGGC	6 cut(s)	205, 268, 427, 607, 643, 880
Ksp22I	TGATCA	1 cut(s)	1275
Kzo9I	GATC	7 cut(s)	528, 584, 801, 1020, 1140, 1260, 1275
LmnI	GCTCC	8 cut(s)	28, 212, 446, 614, 653, 707, 1001, 1119
Lsp1109I	GCAGC	6 cut(s)	190, 247, 869, 964, 980, 1323
LweI	GCATC	2 cut(s)	438, 645
MaeI	CTAG	1 cut(s)	806
MaeII	ACGT	4 cut(s)	249, 939, 948, 1176
MaeIII	GTNAC	3 cut(s)	569, 862, 940
MalI	GATC	7 cut(s)	530, 586, 803, 1022, 1142, 1262, 1277
MbiI	CCGCTC	1 cut(s)	454
MboI	GATC	7 cut(s)	528, 584, 801, 1020, 1140, 1260, 1275
MflI	RGATCY	3 cut(s)	528, 584, 801
MhlI	GDGCHC	4 cut(s)	50, 1011, 1255, 1307
MluCI	AATT	1 cut(s)	86
MlyI	GAGTC	4 cut(s)	95, 451, 600, 895
MmeI	TCCRAC	3 cut(s)	345, 610, 829
MreI	CGCCGGCG	1 cut(s)	266
MroI	TCCGGA	1 cut(s)	587
MroNI	GCCGGC	6 cut(s)	203, 266, 425, 605, 641, 878
MseI	TTAA	5 cut(s)	476, 795, 1332, 1431, 1492
MspCI	CTTAAG	1 cut(s)	1331
MvaI	CCWGG	1 cut(s)	1012
MvnI	CGCG	7 cut(s)	216, 893, 1019, 1133, 1154, 1163, 1427
NaeI	GCCGGC	6 cut(s)	205, 268, 427, 607, 643, 880
NciI	CCSGG	9 cut(s)	716, 785, 786, 1193, 1194, 1203, 1282, 1384, 1441
NcoI	CCATGG	1 cut(s)	1299
NdeII	GATC	7 cut(s)	528, 584, 801, 1020, 1140, 1260, 1275
NgoMIV	GCCGGC	6 cut(s)	203, 266, 425, 605, 641, 878
NlaIII	CATG	8 cut(s)	178, 196, 232, 241, 628, 1228, 1303, 1415
NmeAIII	GCCGAG	6 cut(s)	162, 475, 723, 945, 1099, 1378
NmuCI	GTSAC	2 cut(s)	862, 940
NruI	TCGCGA	1 cut(s)	1163
PasI	CCCWGGG	1 cut(s)	1011
PcsI	WCGNNNNNNNCGW	5 cut(s)	510, 684, 945, 1041, 1044
PdiI	GCCGGC	6 cut(s)	205, 268, 427, 607, 643, 880
PfeI	GAWTC	4 cut(s)	675, 918, 1267, 1444
PflMI	CCANNNNNTGG	2 cut(s)	43, 1270
PinAI	ACCGGT	1 cut(s)	566
PleI	GAGTC	4 cut(s)	95, 451, 599, 895
PpsI	GAGTC	4 cut(s)	95, 451, 599, 895
Ppu21I	YACGTR	1 cut(s)	1177
Psp6I	CCWGG	1 cut(s)	1010
PspEI	GGTNACC	1 cut(s)	569
PspFI	CCCAGC	2 cut(s)	43, 546
PspGI	CCWGG	1 cut(s)	1010
PspOMI	GGGCCC	3 cut(s)	46, 1251, 1303
PsrI	GAACNNNNNNTAC	2 cut(s)	1172, 1204
PstNI	CAGNNNCTG	1 cut(s)	1270
PsuI	RGATCY	3 cut(s)	528, 584, 801
RruI	TCGCGA	1 cut(s)	1163
RsaI	GTAC	5 cut(s)	773, 1088, 1175, 1190, 1200
RsaNI	GTAC	5 cut(s)	772, 1087, 1174, 1189, 1199
SalI	GTCGAC	2 cut(s)	98, 1206
SaqAI	TTAA	5 cut(s)	476, 795, 1332, 1431, 1492
Sau3AI	GATC	7 cut(s)	528, 584, 801, 1020, 1140, 1260, 1275
SchI	GAGTC	4 cut(s)	95, 451, 600, 895
SduI	GDGCHC	4 cut(s)	50, 1011, 1255, 1307
SfaNI	GCATC	2 cut(s)	438, 645
SfcI	CTRYAG	1 cut(s)	382
SgrAI	CRCCGGYG	1 cut(s)	266
SinI	GGWCC	3 cut(s)	534, 668, 840
SmaI	CCCGGG	2 cut(s)	786, 1194
SmlI	CTYRAG	2 cut(s)	353, 1331
SmoI	CTYRAG	2 cut(s)	353, 1331
Sse9I	AATT	1 cut(s)	86
SspMI	CTAG	1 cut(s)	806
StyI	CCWWGG	2 cut(s)	1098, 1299
TaaI	ACNGT	1 cut(s)	1391
TaiI	ACGT	4 cut(s)	252, 942, 951, 1179
TaqI	TCGA	9 cut(s)	99, 132, 255, 378, 597, 663, 687, 1005, 1207
TasI	AATT	1 cut(s)	86
TfiI	GAWTC	4 cut(s)	675, 918, 1267, 1444
Tru1I	TTAA	5 cut(s)	476, 795, 1332, 1431, 1492
Tru9I	TTAA	5 cut(s)	476, 795, 1332, 1431, 1492
TscAI	CASTG	3 cut(s)	530, 842, 938
TseFI	GTSAC	2 cut(s)	862, 940
TseI	GCWGC	6 cut(s)	178, 260, 882, 977, 993, 1336
Tsp45I	GTSAC	2 cut(s)	862, 940
TspDTI	ATGAA	6 cut(s)	64, 245, 319, 1213, 1306, 1374
TspGWI	ACGGA	4 cut(s)	199, 694, 988, 1477
TspMI	CCCGGG	2 cut(s)	784, 1192
TspRI	CASTG	3 cut(s)	530, 842, 938
Van91I	CCANNNNNTGG	2 cut(s)	43, 1270
Vha464I	CTTAAG	1 cut(s)	1331
VpaK11BI	GGWCC	3 cut(s)	534, 668, 840
XmaI	CCCGGG	2 cut(s)	784, 1192
XmiI	GTMKAC	3 cut(s)	99, 507, 1207
XspI	CTAG	1 cut(s)	806
ZraI	GACGTC	1 cut(s)	949

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.