Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0011106

Physical Location & Seq

Genomic Coordinates Reverse (-)

32889529 .. 32902547

Gene Structure 13019 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1262900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1524 bp

ATGAAATTTCTAGGCGTTATGGGAAATTCATTTGGATGTTCAGCATCCGGGGAGCGGTTAGTTTCAGCAGCAAGAGATGGCGATGTTCAAGAAGCCAAGGCCTTGCTGGAATGTAACCCTCGCCTGGCAAGGTACTCCACTTTCGGTGTACGCAATTCCCCTCTCCATTATTCTGCAGCTCAGGGCCACCATGAGATAGTCTCTGTATTGCTTGAGTCTGGAGTTGATATCAATCTCAGGAATTATCGTGGTCAGACTGCTTTGATGCAAGCTTGCCAACATGGTCATTGGGAGGTTGTTCAGACTTTGATGCTTTCTAAAGCCACCATTCACAGAGCAGATTATCTGAATGGCGGTACTGCACTTCACTTTGCCGCTTTGAATGGTCATTCTCGATGCATCAGACTCCTCCTGGCTGATTACATTACCAGCACTCCGGATTTTTGGACTACATTAAGGAATGCTGATAGCAATGAAGAATCAATCACAGAGTTTAATCATGATGTTTTGTTCCAGATAATTAATAGGCCCGCTGATGGAGGAATCACTGCGCTGCATATGGCAGCACTTAATGGTCACATTGAAAGTGTACAACTACTTTTGGGTTTAGGGGCATCTGTTTCTAAGGTAACTGCGCAAGACGGAGCTACAGTTGATCTAATAGGTGCTGGAAGCACAGCCCTACACTATGCTGCATGTGGAGGAAATGCAGAATGTTGTCAAATTTTGATTTCCCGGGGTTCCAGTCTAAGTGCTGAAAATGCGAATGGGTGGACTCCCGTGATGGTGGCTCGTTCGTGGCATAGAGACTGGCTTGAGGAAGTCCTTACCACCGAAGAAGGCCAGTCTCAGATTCTTCCTTCACCATACCTATCCCTTCCCCTTATGAGCATTATGAAGATTGCTAGAGAATGTGGATGGAGGAACAATGATTGTTTATCTACATTTCAAGATCCGTGTGTTGTCTGTTTGGAACAGCAGTGCACAGTGGCCGCAGAAGGTTGTGATCATGAGTTCTGCACAAGATGTGCCTTGTACCTTTGTTCCACAAACTGCACTTCAACTGCGTCTAATGGCCCCCCAGGCTCAATCGCATGTCCTCTCTGCCGAAATGGCATAGTTTCATTTGTCAAGCTTCGAGTAGCAAGATCAATGGCTAAGGAGAATGCAAGAACAAGCTTATCACTATCATTTTGCACATGTTCTTCTGAGGGATCAGATTCCTCCTCAATCACAACTCCACTGTACAAGCCTGAGTTTCGCTGCTCCAGAAAATCCCCTCTCGGGTCTTTTCGGTCCCTCAGCTGCCAGAAGTTCCCATCAATCAAGATCAACTACAACCTTTGCATGGGAGCTCCAAATATCAATCCTTGTTTGGTTCCAAGCTCTAGTAATCGAAAGTTGCGGAACCATTTAGCTAGATCTTCCAAAACCGGCTTTAGGCGATCAGCTTCTCAACCCGATGGCAGAAGGTCGTGGTACTCTTCATTCAATCAAAATGTAACGATTGGCAGTGGATGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006508 GO:0006511 GO:0006521 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010015 GO:0010033 GO:0010101 GO:0010102 GO:0010311 GO:0010364 GO:0010366 GO:0010565 GO:0010817 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0019941 GO:0022622 GO:0030163 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031335 GO:0031336 GO:0032350 GO:0032351 GO:0032353 GO:0032446 GO:0032501 GO:0032502 GO:0033238 GO:0033239 GO:0036211 GO:0042221 GO:0042762 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0045763 GO:0046885 GO:0048364 GO:0048519 GO:0048523 GO:0048527 GO:0048528 GO:0048646 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051175 GO:0051603 GO:0051865 GO:0062012 GO:0062014 GO:0065007 GO:0065008 GO:0070647 GO:0071704 GO:0080090 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:0140096 GO:1900908 GO:1900909 GO:1900911 GO:1900912 GO:1901564 GO:1901565 GO:1901575 GO:1905392 GO:1905393

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank Ank_2 Ank_3 Ank_4

Protein Analysis

508

Amino Acids

54.97

Weight (kDa)

8.23

Isoelectric Point (pI)

50.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ank_2	PF12796	21 - 111	7.7e-15	Ankyrin repeats (3 copies)
Ank	PF00023	52 - 81	9.1e-07	Ankyrin repeat
Ank_4	PF13637	55 - 103	4.3e-10	Ankyrin repeats (many copies)
Ank_2	PF12796	117 - 208	8.2e-10	Ankyrin repeats (3 copies)
Ank	PF00023	181 - 210	8e-06	Ankyrin repeat
Ank_2	PF12796	185 - 270	4e-13	Ankyrin repeats (3 copies)
Ank	PF00023	224 - 254	9.2e-06	Ankyrin repeat
RING_XB3-XBAT31	PF24921	320 - 375	4.9e-18	E3 ubiquitin-protein ligase XB3/XBAT31 RING finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011106)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G57740
fragaria_vesca	FvH4_4g09590
malus_domestica	MD00G1085900.v1.1 MD16G1262900.v1.1
prunus_persica	Prupe.1G097200_v2.0.a1 Prupe.1G097200_v2.0.a1 Prupe.1G097200_v2.0.a1 Prupe.1G097200_v2.0.a1
pyrus_communis	pycom12494g00060
rosa_chinensis	RchiOBHm_Chr4g0404891
rosa_laevigata	RLG00000008896
rosa_multiflora	Rmu_sc0001179.1_g000005
rosa_roxburghii	Rroxscaffold_5G00349040
rosa_rugosa	Rorug04G0049700
rosa_samantha	Rh4AG125900 Rh4BG119700 Rh4BG119800 Rh4CG134100 Rh4DG119400
rosa_wichuraiana	Rw4G010180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	636
AccBSI	CCGCTC	1 cut(s)	55
AccIII	TCCGGA	1 cut(s)	436
AciI	CCGC	6 cut(s)	55, 354, 375, 531, 993, 1405
AclWI	GGATC	2 cut(s)	947, 1222
AcoI	YGGCCR	1 cut(s)	990
AcsI	RAATTY	3 cut(s)	5, 25, 723
AfaI	GTAC	7 cut(s)	134, 150, 358, 591, 1037, 1247, 1481
AfiI	CCNNNNNNNGG	6 cut(s)	54, 124, 536, 1284, 1348, 1440
AflIII	ACRYGT	1 cut(s)	1199
AgsI	TTSAA	6 cut(s)	89, 382, 584, 950, 1062, 1492
AjnI	CCWGG	3 cut(s)	123, 411, 1081
Alw21I	GWGCWC	2 cut(s)	986, 1357
Alw26I	GTCTC	3 cut(s)	205, 801, 852
Alw44I	GTGCAC	1 cut(s)	982
AlwI	GGATC	2 cut(s)	947, 1222
Ama87I	CYCGRG	2 cut(s)	735, 1283
Aor13HI	TCCGGA	1 cut(s)	436
AoxI	GGCC	6 cut(s)	99, 184, 527, 841, 990, 1075
ApaLI	GTGCAC	1 cut(s)	982
ApeKI	GCWGC	7 cut(s)	68, 176, 553, 563, 692, 1263, 1305
ApoI	RAATTY	3 cut(s)	5, 25, 723
AseI	ATTAAT	1 cut(s)	522
AspLEI	GCGC	2 cut(s)	553, 637
AspS9I	GGNCC	4 cut(s)	184, 528, 1076, 1296
AsuC2I	CCSGG	3 cut(s)	49, 736, 737
AsuHPI	GGTGA	1 cut(s)	855
AvaI	CYCGRG	2 cut(s)	735, 1283
AvaII	GGWCC	1 cut(s)	1296
BaeGI	GKGCMC	1 cut(s)	986
BanII	GRGCYC	1 cut(s)	1357
Bbv12I	GWGCWC	2 cut(s)	986, 1357
BbvCI	CCTCAGC	1 cut(s)	1301
BbvI	GCAGC	7 cut(s)	80, 188, 540, 575, 679, 1250, 1292
BccI	CCATC	6 cut(s)	71, 530, 778, 912, 1327, 1457
BciT130I	CCWGG	3 cut(s)	125, 413, 1083
BclI	TGATCA	1 cut(s)	1006
BcnI	CCSGG	3 cut(s)	49, 736, 737
BcoDI	GTCTC	3 cut(s)	205, 801, 852
BfaI	CTAG	4 cut(s)	11, 906, 1389, 1419
BfmI	CTRYAG	2 cut(s)	174, 648
BglI	GCCNNNNNGGC	2 cut(s)	1083, 1113
BglII	AGATCT	1 cut(s)	1421
BisI	GCNGC	9 cut(s)	69, 177, 375, 554, 564, 693, 993, 1264, 1306
BlsI	GCNGC	9 cut(s)	70, 178, 376, 555, 565, 694, 994, 1265, 1307
Bme1390I	CCNGG	6 cut(s)	49, 125, 413, 736, 737, 1083
Bme18I	GGWCC	1 cut(s)	1296
BmeT110I	CYCGRG	2 cut(s)	735, 1283
BmgT120I	GGNCC	4 cut(s)	184, 528, 1076, 1296
BmiI	GGNNCC	5 cut(s)	742, 1078, 1298, 1380, 1409
BmrFI	CCNGG	6 cut(s)	49, 125, 413, 736, 737, 1083
BmsI	GCATC	6 cut(s)	53, 255, 300, 386, 408, 623
BplI	GAGNNNNNCTC	2 cut(s)	185, 217
BpmI	CTGGAG	2 cut(s)	240, 1252
Bpu10I	CCTNAGC	3 cut(s)	180, 1158, 1301
BpuEI	CTTGAG	2 cut(s)	233, 836
BpuMI	CCSGG	3 cut(s)	49, 736, 737
BsaBI	GATNNNNATC	1 cut(s)	231
BsaJI	CCNNGG	5 cut(s)	48, 96, 735, 736, 1081
BsaWI	WCCGGW	1 cut(s)	436
BsaXI	ACNNNNNCTCC	4 cut(s)	418, 448, 636, 666
Bsc4I	CCNNNNNNNGG	6 cut(s)	54, 124, 536, 1284, 1348, 1440
Bse118I	RCCGGY	1 cut(s)	1433
Bse1I	ACTGG	3 cut(s)	744, 815, 844
Bse3DI	GCAATG	1 cut(s)	478
Bse8I	GATNNNNATC	1 cut(s)	231
BseAI	TCCGGA	1 cut(s)	436
BseBI	CCWGG	3 cut(s)	125, 413, 1083
BseDI	CCNNGG	5 cut(s)	48, 96, 735, 736, 1081
BseGI	GGATG	4 cut(s)	41, 44, 923, 1523
BseJI	GATNNNNATC	1 cut(s)	231
BseLI	CCNNNNNNNGG	6 cut(s)	54, 124, 536, 1284, 1348, 1440
BseMI	GCAATG	1 cut(s)	478
BseMII	CTCAG	6 cut(s)	194, 250, 863, 1200, 1245, 1315
BseNI	ACTGG	3 cut(s)	744, 815, 844
BseRI	GAGGAG	2 cut(s)	398, 1216
BseSI	GKGCMC	1 cut(s)	986
BseXI	GCAGC	7 cut(s)	80, 188, 540, 575, 679, 1250, 1292
BsgI	GTGCAG	3 cut(s)	345, 1003, 1039
BshFI	GGCC	6 cut(s)	101, 186, 529, 843, 992, 1077
BsiHKAI	GWGCWC	2 cut(s)	986, 1357
BsiHKCI	CYCGRG	2 cut(s)	735, 1283
BsiSI	CCGG	4 cut(s)	48, 437, 736, 1434
BslFI	GGGAC	1 cut(s)	1282
BslI	CCNNNNNNNGG	6 cut(s)	54, 124, 536, 1284, 1348, 1440
BsmAI	GTCTC	3 cut(s)	205, 801, 852
BsmFI	GGGAC	1 cut(s)	1282
BsmI	GAATGC	2 cut(s)	466, 1171
BsnI	GGCC	6 cut(s)	101, 186, 529, 843, 992, 1077
BsoBI	CYCGRG	2 cut(s)	735, 1283
Bsp1286I	GDGCHC	2 cut(s)	986, 1357
Bsp13I	TCCGGA	1 cut(s)	436
Bsp1407I	TGTACA	2 cut(s)	589, 1245
Bsp143I	GATC	8 cut(s)	655, 952, 1006, 1148, 1214, 1329, 1421, 1445
BspACI	CCGC	6 cut(s)	55, 354, 375, 531, 993, 1405
BspANI	GGCC	6 cut(s)	101, 186, 529, 843, 992, 1077
BspCNI	CTCAG	6 cut(s)	193, 249, 862, 1201, 1246, 1314
BspEI	TCCGGA	1 cut(s)	436
BspHI	TCATGA	2 cut(s)	499, 1009
BspLI	GGNNCC	5 cut(s)	742, 1078, 1298, 1380, 1409
BspMAI	CTGCAG	1 cut(s)	178
BspPI	GGATC	2 cut(s)	947, 1222
BsrBI	CCGCTC	1 cut(s)	55
BsrDI	GCAATG	1 cut(s)	478
BsrFI	RCCGGY	1 cut(s)	1433
BsrGI	TGTACA	2 cut(s)	589, 1245
BsrI	ACTGG	3 cut(s)	744, 815, 844
BssAI	RCCGGY	1 cut(s)	1433
BssECI	CCNNGG	5 cut(s)	48, 96, 735, 736, 1081
BssMI	GATC	8 cut(s)	655, 952, 1006, 1148, 1214, 1329, 1421, 1445
BssT1I	CCWWGG	1 cut(s)	96
Bst2UI	CCWGG	3 cut(s)	125, 413, 1083
Bst4CI	ACNGT	3 cut(s)	652, 988, 1245
Bst6I	CTCTTC	1 cut(s)	1489
BstAUI	TGTACA	2 cut(s)	589, 1245
BstC8I	GCNNGC	3 cut(s)	270, 274, 531
BstDEI	CTNAG	9 cut(s)	180, 236, 624, 749, 849, 1158, 1209, 1254, 1301
BstF5I	GGATG	4 cut(s)	41, 44, 923, 1523
BstHHI	GCGC	2 cut(s)	553, 637
BstKTI	GATC	8 cut(s)	658, 955, 1009, 1151, 1217, 1332, 1424, 1448
BstMAI	GTCTC	3 cut(s)	205, 801, 852
BstMBI	GATC	8 cut(s)	655, 952, 1006, 1148, 1214, 1329, 1421, 1445
BstMWI	GCNNNNNNNGC	3 cut(s)	761, 1083, 1113
BstNI	CCWGG	3 cut(s)	125, 413, 1083
BstNSI	RCATGY	3 cut(s)	699, 1098, 1203
BstSCI	CCNGG	6 cut(s)	47, 123, 411, 734, 735, 1081
BstSFI	CTRYAG	2 cut(s)	174, 648
BstSLI	GKGCMC	1 cut(s)	986
BstV1I	GCAGC	7 cut(s)	80, 188, 540, 575, 679, 1250, 1292
BstX2I	RGATCY	2 cut(s)	952, 1421
BstYI	RGATCY	2 cut(s)	952, 1421
BsuRI	GGCC	6 cut(s)	101, 186, 529, 843, 992, 1077
BtgZI	GCGATG	1 cut(s)	96
BtsCI	GGATG	4 cut(s)	41, 44, 923, 1523
BtsI	GCAGTG	3 cut(s)	546, 986, 1519
BtsIMutI	CAGTG	5 cut(s)	546, 986, 993, 1241, 1519
Cac8I	GCNNGC	3 cut(s)	270, 274, 531
CciI	TCATGA	2 cut(s)	499, 1009
CfoI	GCGC	2 cut(s)	553, 637
Cfr10I	RCCGGY	1 cut(s)	1433
Cfr13I	GGNCC	4 cut(s)	184, 528, 1076, 1296
Cfr9I	CCCGGG	1 cut(s)	735
CseI	GACGC	1 cut(s)	1056
Csp6I	GTAC	7 cut(s)	133, 149, 357, 590, 1036, 1246, 1480
CviAII	CATG	8 cut(s)	191, 281, 500, 696, 1010, 1095, 1200, 1348
CviQI	GTAC	7 cut(s)	133, 149, 357, 590, 1036, 1246, 1480
DdeI	CTNAG	9 cut(s)	180, 236, 624, 749, 849, 1158, 1209, 1254, 1301
DpnI	GATC	8 cut(s)	657, 954, 1008, 1150, 1216, 1331, 1423, 1447
DpnII	GATC	8 cut(s)	655, 952, 1006, 1148, 1214, 1329, 1421, 1445
EaeI	YGGCCR	1 cut(s)	990
Eam1104I	CTCTTC	1 cut(s)	1489
EarI	CTCTTC	1 cut(s)	1489
Ecl136II	GAGCTC	1 cut(s)	1355
Eco130I	CCWWGG	1 cut(s)	96
Eco147I	AGGCCT	1 cut(s)	101
Eco24I	GRGCYC	1 cut(s)	1357
Eco32I	GATATC	1 cut(s)	229
Eco47I	GGWCC	1 cut(s)	1296
Eco53kI	GAGCTC	1 cut(s)	1355
Eco88I	CYCGRG	2 cut(s)	735, 1283
EcoICRI	GAGCTC	1 cut(s)	1355
EcoRII	CCWGG	3 cut(s)	123, 411, 1081
EcoRV	GATATC	1 cut(s)	229
EcoT14I	CCWWGG	1 cut(s)	96
EcoT22I	ATGCAT	1 cut(s)	401
EcoT38I	GRGCYC	1 cut(s)	1357
ErhI	CCWWGG	1 cut(s)	96
FaeI	CATG	8 cut(s)	194, 284, 503, 699, 1013, 1098, 1203, 1351
FaqI	GGGAC	1 cut(s)	1282
FatI	CATG	8 cut(s)	190, 280, 499, 695, 1009, 1094, 1199, 1347
FauI	CCCGC	1 cut(s)	538
FauNDI	CATATG	1 cut(s)	558
FbaI	TGATCA	1 cut(s)	1006
Fnu4HI	GCNGC	9 cut(s)	69, 177, 375, 554, 564, 693, 993, 1264, 1306
FokI	GGATG	3 cut(s)	31, 48, 930
FriOI	GRGCYC	1 cut(s)	1357
Fsp4HI	GCNGC	9 cut(s)	69, 177, 375, 554, 564, 693, 993, 1264, 1306
FspBI	CTAG	4 cut(s)	11, 906, 1389, 1419
FspI	TGCGCA	1 cut(s)	636
GlaI	GCGC	2 cut(s)	552, 636
GluI	GCNGC	9 cut(s)	69, 177, 375, 554, 564, 693, 993, 1264, 1306
GsuI	CTGGAG	2 cut(s)	240, 1252
HaeIII	GGCC	6 cut(s)	101, 186, 529, 843, 992, 1077
HapII	CCGG	4 cut(s)	48, 437, 736, 1434
HgaI	GACGC	1 cut(s)	1056
HhaI	GCGC	2 cut(s)	553, 637
Hin1II	CATG	8 cut(s)	194, 284, 503, 699, 1013, 1098, 1203, 1351
Hin6I	GCGC	2 cut(s)	551, 635
HinP1I	GCGC	2 cut(s)	551, 635
HindIII	AAGCTT	3 cut(s)	270, 1133, 1177
HinfI	GANTC	7 cut(s)	215, 405, 479, 543, 775, 853, 1220
HpaII	CCGG	4 cut(s)	48, 437, 736, 1434
HphI	GGTGA	1 cut(s)	855
Hpy166II	GTNNAC	4 cut(s)	149, 590, 774, 984
Hpy188I	TCNGA	7 cut(s)	255, 303, 348, 404, 852, 1210, 1219
Hpy8I	GTNNAC	4 cut(s)	149, 590, 774, 984
HpyAV	CCTTC	5 cut(s)	833, 870, 887, 992, 1464
HpyCH4III	ACNGT	3 cut(s)	652, 988, 1245
HpyF10VI	GCNNNNNNNGC	3 cut(s)	761, 1083, 1113
HpyF3I	CTNAG	9 cut(s)	180, 236, 624, 749, 849, 1158, 1209, 1254, 1301
Hsp92II	CATG	8 cut(s)	194, 284, 503, 699, 1013, 1098, 1203, 1351
HspAI	GCGC	2 cut(s)	551, 635
Kpn2I	TCCGGA	1 cut(s)	436
Ksp22I	TGATCA	1 cut(s)	1006
Kzo9I	GATC	8 cut(s)	655, 952, 1006, 1148, 1214, 1329, 1421, 1445
LmnI	GCTCC	5 cut(s)	52, 644, 1271, 1352, 1360
Lsp1109I	GCAGC	7 cut(s)	80, 188, 540, 575, 679, 1250, 1292
LweI	GCATC	6 cut(s)	53, 255, 300, 386, 408, 623
MaeI	CTAG	4 cut(s)	11, 906, 1389, 1419
MaeIII	GTNAC	4 cut(s)	113, 575, 628, 1501
MalI	GATC	8 cut(s)	657, 954, 1008, 1150, 1216, 1331, 1423, 1447
MbiI	CCGCTC	1 cut(s)	55
MboI	GATC	8 cut(s)	655, 952, 1006, 1148, 1214, 1329, 1421, 1445
MboII	GAAGA	7 cut(s)	488, 848, 848, 910, 1197, 1416, 1476
MflI	RGATCY	2 cut(s)	952, 1421
MhlI	GDGCHC	2 cut(s)	986, 1357
MluCI	AATT	6 cut(s)	5, 25, 154, 241, 519, 723
MlyI	GAGTC	3 cut(s)	224, 399, 769
Mph1103I	ATGCAT	1 cut(s)	401
MroI	TCCGGA	1 cut(s)	436
MseI	TTAA	4 cut(s)	455, 495, 522, 570
MslI	CAYNNNNRTG	1 cut(s)	34
MspA1I	CMGCKG	2 cut(s)	533, 1305
MspI	CCGG	4 cut(s)	48, 437, 736, 1434
MspR9I	CCNGG	6 cut(s)	49, 125, 413, 736, 737, 1083
Mva1269I	GAATGC	2 cut(s)	466, 1171
MvaI	CCWGG	3 cut(s)	125, 413, 1083
MwoI	GCNNNNNNNGC	3 cut(s)	761, 1083, 1113
NciI	CCSGG	3 cut(s)	49, 736, 737
NdeI	CATATG	1 cut(s)	558
NdeII	GATC	8 cut(s)	655, 952, 1006, 1148, 1214, 1329, 1421, 1445
NlaIII	CATG	8 cut(s)	194, 284, 503, 699, 1013, 1098, 1203, 1351
NlaIV	GGNNCC	5 cut(s)	742, 1078, 1298, 1380, 1409
NmuCI	GTSAC	1 cut(s)	575
NsbI	TGCGCA	1 cut(s)	636
NsiI	ATGCAT	1 cut(s)	401
NspI	RCATGY	3 cut(s)	699, 1098, 1203
PagI	TCATGA	2 cut(s)	499, 1009
PceI	AGGCCT	1 cut(s)	101
PciI	ACATGT	1 cut(s)	1199
PctI	GAATGC	2 cut(s)	466, 1171
PfeI	GAWTC	4 cut(s)	479, 543, 853, 1220
PkrI	GCNGC	9 cut(s)	70, 178, 376, 555, 565, 694, 994, 1265, 1307
PleI	GAGTC	3 cut(s)	223, 399, 769
PpsI	GAGTC	3 cut(s)	223, 399, 769
PscI	ACATGT	1 cut(s)	1199
PshBI	ATTAAT	1 cut(s)	522
Psp124BI	GAGCTC	1 cut(s)	1357
Psp6I	CCWGG	3 cut(s)	123, 411, 1081
PspGI	CCWGG	3 cut(s)	123, 411, 1081
PspN4I	GGNNCC	5 cut(s)	742, 1078, 1298, 1380, 1409
PspPI	GGNCC	4 cut(s)	184, 528, 1076, 1296
PstI	CTGCAG	1 cut(s)	178
PsuI	RGATCY	2 cut(s)	952, 1421
PvuII	CAGCTG	1 cut(s)	1305
RsaI	GTAC	7 cut(s)	134, 150, 358, 591, 1037, 1247, 1481
RsaNI	GTAC	7 cut(s)	133, 149, 357, 590, 1036, 1246, 1480
RseI	CAYNNNNRTG	1 cut(s)	34
SacI	GAGCTC	1 cut(s)	1357
SaqAI	TTAA	4 cut(s)	455, 495, 522, 570
SatI	GCNGC	9 cut(s)	69, 177, 375, 554, 564, 693, 993, 1264, 1306
Sau3AI	GATC	8 cut(s)	655, 952, 1006, 1148, 1214, 1329, 1421, 1445
Sau96I	GGNCC	4 cut(s)	184, 528, 1076, 1296
SchI	GAGTC	3 cut(s)	224, 399, 769
ScrFI	CCNGG	6 cut(s)	49, 125, 413, 736, 737, 1083
SduI	GDGCHC	2 cut(s)	986, 1357
SfaNI	GCATC	6 cut(s)	53, 255, 300, 386, 408, 623
SfcI	CTRYAG	2 cut(s)	174, 648
SinI	GGWCC	1 cut(s)	1296
SmaI	CCCGGG	1 cut(s)	737
SmiMI	CAYNNNNRTG	1 cut(s)	34
SmlI	CTYRAG	2 cut(s)	212, 815
SmoI	CTYRAG	2 cut(s)	212, 815
Sse9I	AATT	6 cut(s)	5, 25, 154, 241, 519, 723
SseBI	AGGCCT	1 cut(s)	101
SsiI	CCGC	6 cut(s)	55, 354, 375, 531, 993, 1405
SspMI	CTAG	4 cut(s)	11, 906, 1389, 1419
SstI	GAGCTC	1 cut(s)	1357
StuI	AGGCCT	1 cut(s)	101
StyD4I	CCNGG	6 cut(s)	47, 123, 411, 734, 735, 1081
StyI	CCWWGG	1 cut(s)	96
TaaI	ACNGT	3 cut(s)	652, 988, 1245
TaqI	TCGA	3 cut(s)	394, 1138, 1396
TaqII	GACCGA	1 cut(s)	1284
TasI	AATT	6 cut(s)	5, 25, 154, 241, 519, 723
TatI	WGTACW	2 cut(s)	589, 1245
TauI	GCSGC	2 cut(s)	377, 995
TfiI	GAWTC	4 cut(s)	479, 543, 853, 1220
Tru1I	TTAA	4 cut(s)	455, 495, 522, 570
Tru9I	TTAA	4 cut(s)	455, 495, 522, 570
TscAI	CASTG	5 cut(s)	553, 986, 993, 1248, 1519
TseFI	GTSAC	1 cut(s)	575
TseI	GCWGC	7 cut(s)	68, 176, 553, 563, 692, 1263, 1305
Tsp45I	GTSAC	1 cut(s)	575
TspDTI	ATGAA	6 cut(s)	17, 18, 489, 911, 1113, 1476
TspGWI	ACGGA	2 cut(s)	657, 945
TspMI	CCCGGG	1 cut(s)	735
TspRI	CASTG	5 cut(s)	553, 986, 993, 1248, 1519
VneI	GTGCAC	1 cut(s)	982
VpaK11BI	GGWCC	1 cut(s)	1296
VspI	ATTAAT	1 cut(s)	522
XapI	RAATTY	3 cut(s)	5, 25, 723
XceI	RCATGY	3 cut(s)	699, 1098, 1203
XcmI	CCANNNNNNNNNTGG	1 cut(s)	103
XmaI	CCCGGG	1 cut(s)	735
XspI	CTAG	4 cut(s)	11, 906, 1389, 1419
Zsp2I	ATGCAT	1 cut(s)	401

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.