Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

tig00012494

Orthogroup ID

OG0011106

Physical Location & Seq

Genomic Coordinates Forward (+)

208669 .. 214054

Gene Structure 5386 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12494g00060.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1500 bp

ATGAAATTTCTAAGCGTTATGGGAAATTCATTTGGATGTTCAGCATCCGGGGAGCGGTTAGTTTCAGCAGCAAGAGATGGCGATGTTCAGGAAGCCAAGGCCTTGCTAGAATGTAACCCTCGCCTGGCAAGGTACTCCACTTTCGGTGTACGCAATTCCCCTCTCCATTATTCTGCAGCTCAGGGCCACCATGAGATAGTCTCTCTATTGCTTGAGTCTGGAGTTGATATCAATCTGAGGAATTATCGCGGTCAGACTGCTTTGATGCAAGCTTGCCAACATGGTCACTGGGAGGTTGTTCAGACTTTGATTCTTTCTAAGGCCACAATTCACAGAGCAGATTATCTGAATGGCGGTACTGCACTCCACCTTGCCGCTTTGAATGGTCATTCTCGATGCATCCGACTCCTCCTGGCTGATTACATTCCCAGCACTGCAGATTTTTGGACTACGTTAAGGAATGCTGATAGCAATGAAGAATCAATCACAGAGTTTAATCATGAGGTTTTGTTCCAGATAATTAATAGGCCCGCTGATGGAGGAATCACTGCGCTGCATATGGCAGCACTGAACGGTCACATTGAAAGCATACAACTACTTTTGGATTTAGGGGCTTCTGTTTCTAAGGTGACTGTGCAAGACGGTGCTACAATTGATCTAATAGGTGCTGGAAGCACAGCCCTGCATTATGCTGCATGCGGAGGAAATGCGCAATGTTGTCAAATTTTGATTTCCAGGGGATCCAGTCTGAATGCTGAAAATGCCAATGGATGGACTCCCTTGATGGTAGCTCGGTCATGGCATAGAGACTGGCTTGAGGAAAACCTTACCTCCGAGCAAGAAGGCCAGTCGCAGATTATTCCTTCACCATACCTATCTCTTCCCCTTATGAGCATTATGAAGATTGCTAGAGAATGTGGATGGAGGAACAATGATTCTTTATCTACGTGCCAAGATCCATGTGTTGTCTGTTTGGAACAACAGTGCACAGTGGCCGCAGAAGGTTGCGATCATGAGTTCTGCACAAGGTGTGCCTTGTACCTTTGTTCCACAAACTGCACTTCAACTGTGTCCAATGGCCCCCCAGGCTCAATCGCGTGTCCTCTCTGCCGAAATGGCATAGTTTCATTTGTCAAGCTTCGAGGAGCAAGATCAATGGCTAAGGAGAATGCAAGAACAAGTATATCACTATCATTTTGCACATGTTCTTCTGAGGGATCAGATTCCTCCTCATTAACAACCCCATTATACAAGCCTGATTTTCGTTGCTCCGGAAAATCCCCTCTCGGGTCTTTCCGGTCCCTCAGCTGCCAGAAGTTCCCATCAATCAAGATCAACTACAACCTTTGCATGGGAGCTCCAAATATTAATCCTTGTTTGGTTCCAATCTCTAGTAGTCGAAAGTTGCGGAACCGTTTGGCCAGATGTTCCAGAACAGGCTTTAGGCGATCGGCTTCTCAACCCGATGGCAGAAGGTCGTGGTTCTCTTCATTCAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006508 GO:0006511 GO:0006521 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010015 GO:0010033 GO:0010101 GO:0010102 GO:0010311 GO:0010364 GO:0010366 GO:0010565 GO:0010817 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0019941 GO:0022622 GO:0030163 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031335 GO:0031336 GO:0032350 GO:0032351 GO:0032353 GO:0032446 GO:0032501 GO:0032502 GO:0033238 GO:0033239 GO:0036211 GO:0042221 GO:0042762 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0045763 GO:0046885 GO:0048364 GO:0048519 GO:0048523 GO:0048527 GO:0048528 GO:0048646 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051175 GO:0051603 GO:0051865 GO:0062012 GO:0062014 GO:0065007 GO:0065008 GO:0070647 GO:0071704 GO:0080090 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:0140096 GO:1900908 GO:1900909 GO:1900911 GO:1900912 GO:1901564 GO:1901565 GO:1901575 GO:1905392 GO:1905393

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank Ank_2 Ank_3 Ank_4

Protein Analysis

500

Amino Acids

54.23

Weight (kDa)

8.23

Isoelectric Point (pI)

48.09

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011106)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G57740
fragaria_vesca	FvH4_4g09590
malus_domestica	MD00G1085900.v1.1 MD16G1262900.v1.1
prunus_persica	Prupe.1G097200_v2.0.a1 Prupe.1G097200_v2.0.a1 Prupe.1G097200_v2.0.a1 Prupe.1G097200_v2.0.a1
pyrus_communis	pycom12494g00060
rosa_chinensis	RchiOBHm_Chr4g0404891
rosa_laevigata	RLG00000008896
rosa_multiflora	Rmu_sc0001179.1_g000005
rosa_roxburghii	Rroxscaffold_5G00349040
rosa_rugosa	Rorug04G0049700
rosa_samantha	Rh4AG125900 Rh4BG119700 Rh4BG119800 Rh4CG134100 Rh4DG119400
rosa_wichuraiana	Rw4G010180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	711
AccB7I	CCANNNNNTGG	1 cut(s)	771
AccBSI	CCGCTC	1 cut(s)	55
AccII	CGCG	2 cut(s)	249, 1097
AccIII	TCCGGA	1 cut(s)	1271
AciI	CCGC	8 cut(s)	55, 249, 354, 375, 531, 699, 996, 1408
AclWI	GGATC	4 cut(s)	735, 748, 950, 1225
AcoI	YGGCCR	2 cut(s)	993, 1419
AcsI	RAATTY	3 cut(s)	5, 25, 723
AdeI	CACNNNGTG	1 cut(s)	1029
AfaI	GTAC	4 cut(s)	134, 150, 358, 1040
AfiI	CCNNNNNNNGG	6 cut(s)	54, 124, 536, 771, 1287, 1351
AflIII	ACRYGT	1 cut(s)	1202
AgsI	TTSAA	4 cut(s)	382, 584, 1065, 1495
AjnI	CCWGG	4 cut(s)	123, 411, 734, 1084
AluBI	AGCT	6 cut(s)	179, 272, 791, 1138, 1308, 1358
AluI	AGCT	6 cut(s)	179, 272, 791, 1138, 1308, 1358
Alw21I	GWGCWC	2 cut(s)	989, 1360
Alw26I	GTCTC	2 cut(s)	205, 801
Alw44I	GTGCAC	1 cut(s)	985
AlwI	GGATC	4 cut(s)	735, 748, 950, 1225
Ama87I	CYCGRG	1 cut(s)	1286
Aor13HI	TCCGGA	1 cut(s)	1271
AoxI	GGCC	8 cut(s)	99, 184, 321, 527, 844, 993, 1078, 1419
ApaLI	GTGCAC	1 cut(s)	985
ApeKI	GCWGC	6 cut(s)	68, 176, 553, 563, 692, 1308
ApoI	RAATTY	3 cut(s)	5, 25, 723
AseI	ATTAAT	2 cut(s)	522, 1368
AspLEI	GCGC	2 cut(s)	553, 712
AspS9I	GGNCC	4 cut(s)	184, 528, 1079, 1299
AsuC2I	CCSGG	1 cut(s)	49
AsuHPI	GGTGA	2 cut(s)	640, 858
AvaI	CYCGRG	1 cut(s)	1286
AvaII	GGWCC	1 cut(s)	1299
BaeGI	GKGCMC	1 cut(s)	989
BalI	TGGCCA	1 cut(s)	1421
BamHI	GGATCC	1 cut(s)	740
BanII	GRGCYC	1 cut(s)	1360
Bbv12I	GWGCWC	2 cut(s)	989, 1360
BbvCI	CCTCAGC	1 cut(s)	1304
BbvI	GCAGC	6 cut(s)	80, 188, 540, 575, 679, 1295
BccI	CCATC	7 cut(s)	71, 530, 765, 778, 915, 1330, 1460
BciT130I	CCWGG	4 cut(s)	125, 413, 736, 1086
BcnI	CCSGG	1 cut(s)	49
BcoDI	GTCTC	2 cut(s)	205, 801
BfaI	CTAG	3 cut(s)	107, 909, 1392
BfmI	CTRYAG	2 cut(s)	174, 435
BglI	GCCNNNNNGGC	2 cut(s)	1086, 1116
BisI	GCNGC	8 cut(s)	69, 177, 375, 554, 564, 693, 996, 1309
BlsI	GCNGC	8 cut(s)	70, 178, 376, 555, 565, 694, 997, 1310
Bme1390I	CCNGG	5 cut(s)	49, 125, 413, 736, 1086
Bme18I	GGWCC	1 cut(s)	1299
BmeT110I	CYCGRG	1 cut(s)	1286
BmgT120I	GGNCC	4 cut(s)	184, 528, 1079, 1299
BmiI	GGNNCC	5 cut(s)	742, 1081, 1301, 1383, 1412
BmrFI	CCNGG	5 cut(s)	49, 125, 413, 736, 1086
BmrI	ACTGGG	1 cut(s)	298
BmsI	GCATC	4 cut(s)	53, 255, 386, 408
BmuI	ACTGGG	1 cut(s)	298
BplI	GAGNNNNNCTC	2 cut(s)	185, 217
BpmI	CTGGAG	1 cut(s)	240
Bpu10I	CCTNAGC	3 cut(s)	180, 1161, 1304
BpuEI	CTTGAG	2 cut(s)	233, 836
BpuMI	CCSGG	1 cut(s)	49
BsaAI	YACGTR	1 cut(s)	948
BsaBI	GATNNNNATC	1 cut(s)	231
BsaJI	CCNNGG	4 cut(s)	48, 96, 735, 1084
BsaWI	WCCGGW	2 cut(s)	1271, 1296
BsaXI	ACNNNNNCTCC	2 cut(s)	815, 845
Bsc4I	CCNNNNNNNGG	6 cut(s)	54, 124, 536, 771, 1287, 1351
Bse1I	ACTGG	4 cut(s)	293, 744, 815, 847
Bse3DI	GCAATG	2 cut(s)	478, 719
Bse8I	GATNNNNATC	1 cut(s)	231
BseAI	TCCGGA	1 cut(s)	1271
BseBI	CCWGG	4 cut(s)	125, 413, 736, 1086
BseDI	CCNNGG	4 cut(s)	48, 96, 735, 1084
BseGI	GGATG	5 cut(s)	41, 44, 399, 776, 926
BseJI	GATNNNNATC	1 cut(s)	231
BseLI	CCNNNNNNNGG	6 cut(s)	54, 124, 536, 771, 1287, 1351
BseMI	GCAATG	2 cut(s)	478, 719
BseMII	CTCAG	4 cut(s)	194, 227, 1203, 1318
BseNI	ACTGG	4 cut(s)	293, 744, 815, 847
BseRI	GAGGAG	3 cut(s)	398, 1158, 1219
BseSI	GKGCMC	1 cut(s)	989
BseXI	GCAGC	6 cut(s)	80, 188, 540, 575, 679, 1295
BseYI	CCCAGC	1 cut(s)	428
BsgI	GTGCAG	3 cut(s)	345, 1006, 1042
Bsh1236I	CGCG	2 cut(s)	249, 1097
Bsh1285I	CGRYCG	1 cut(s)	1451
BshFI	GGCC	8 cut(s)	101, 186, 323, 529, 846, 995, 1080, 1421
BsiEI	CGRYCG	1 cut(s)	1451
BsiHKAI	GWGCWC	2 cut(s)	989, 1360
BsiHKCI	CYCGRG	1 cut(s)	1286
BsiSI	CCGG	3 cut(s)	48, 1272, 1297
BslFI	GGGAC	1 cut(s)	1285
BslI	CCNNNNNNNGG	6 cut(s)	54, 124, 536, 771, 1287, 1351
BsmAI	GTCTC	2 cut(s)	205, 801
BsmFI	GGGAC	1 cut(s)	1285
BsmI	GAATGC	3 cut(s)	466, 757, 1174
BsnI	GGCC	8 cut(s)	101, 186, 323, 529, 846, 995, 1080, 1421
BsoBI	CYCGRG	1 cut(s)	1286
Bsp1286I	GDGCHC	2 cut(s)	989, 1360
Bsp13I	TCCGGA	1 cut(s)	1271
Bsp143I	GATC	8 cut(s)	655, 740, 955, 1009, 1151, 1217, 1332, 1448
BspACI	CCGC	8 cut(s)	55, 249, 354, 375, 531, 699, 996, 1408
BspANI	GGCC	8 cut(s)	101, 186, 323, 529, 846, 995, 1080, 1421
BspCNI	CTCAG	4 cut(s)	193, 228, 1204, 1317
BspEI	TCCGGA	1 cut(s)	1271
BspFNI	CGCG	2 cut(s)	249, 1097
BspHI	TCATGA	2 cut(s)	499, 1012
BspLI	GGNNCC	5 cut(s)	742, 1081, 1301, 1383, 1412
BspMAI	CTGCAG	2 cut(s)	178, 439
BspPI	GGATC	4 cut(s)	735, 748, 950, 1225
BsrBI	CCGCTC	1 cut(s)	55
BsrDI	GCAATG	2 cut(s)	478, 719
BsrI	ACTGG	4 cut(s)	293, 744, 815, 847
BssECI	CCNNGG	4 cut(s)	48, 96, 735, 1084
BssMI	GATC	8 cut(s)	655, 740, 955, 1009, 1151, 1217, 1332, 1448
BssT1I	CCWWGG	1 cut(s)	96
Bst2UI	CCWGG	4 cut(s)	125, 413, 736, 1086
Bst4CI	ACNGT	7 cut(s)	575, 634, 644, 984, 991, 1069, 1415
Bst6I	CTCTTC	2 cut(s)	885, 1492
BstBAI	YACGTR	1 cut(s)	948
BstC8I	GCNNGC	4 cut(s)	270, 274, 531, 697
BstDEI	CTNAG	8 cut(s)	11, 180, 236, 318, 624, 1161, 1212, 1304
BstF5I	GGATG	5 cut(s)	41, 44, 399, 776, 926
BstFNI	CGCG	2 cut(s)	249, 1097
BstHHI	GCGC	2 cut(s)	553, 712
BstKTI	GATC	8 cut(s)	658, 743, 958, 1012, 1154, 1220, 1335, 1451
BstMAI	GTCTC	2 cut(s)	205, 801
BstMBI	GATC	8 cut(s)	655, 740, 955, 1009, 1151, 1217, 1332, 1448
BstMCI	CGRYCG	1 cut(s)	1451
BstMWI	GCNNNNNNNGC	3 cut(s)	761, 1086, 1116
BstNI	CCWGG	4 cut(s)	125, 413, 736, 1086
BstNSI	RCATGY	2 cut(s)	699, 1206
BstSCI	CCNGG	5 cut(s)	47, 123, 411, 734, 1084
BstSFI	CTRYAG	2 cut(s)	174, 435
BstSLI	GKGCMC	1 cut(s)	989
BstUI	CGCG	2 cut(s)	249, 1097
BstV1I	GCAGC	6 cut(s)	80, 188, 540, 575, 679, 1295
BstX2I	RGATCY	2 cut(s)	740, 955
BstYI	RGATCY	2 cut(s)	740, 955
BsuRI	GGCC	8 cut(s)	101, 186, 323, 529, 846, 995, 1080, 1421
BtgZI	GCGATG	1 cut(s)	96
BtsCI	GGATG	5 cut(s)	41, 44, 399, 776, 926
BtsI	GCAGTG	2 cut(s)	432, 546
BtsIMutI	CAGTG	6 cut(s)	286, 432, 546, 566, 989, 996
Cac8I	GCNNGC	4 cut(s)	270, 274, 531, 697
CciI	TCATGA	2 cut(s)	499, 1012
CfoI	GCGC	2 cut(s)	553, 712
Cfr13I	GGNCC	4 cut(s)	184, 528, 1079, 1299
Csp6I	GTAC	4 cut(s)	133, 149, 357, 1039
CviAII	CATG	9 cut(s)	191, 281, 500, 696, 798, 960, 1013, 1203, 1351
CviQI	GTAC	4 cut(s)	133, 149, 357, 1039
DdeI	CTNAG	8 cut(s)	11, 180, 236, 318, 624, 1161, 1212, 1304
DpnI	GATC	8 cut(s)	657, 742, 957, 1011, 1153, 1219, 1334, 1450
DpnII	GATC	8 cut(s)	655, 740, 955, 1009, 1151, 1217, 1332, 1448
DraIII	CACNNNGTG	1 cut(s)	1029
EaeI	YGGCCR	2 cut(s)	993, 1419
Eam1104I	CTCTTC	2 cut(s)	885, 1492
EarI	CTCTTC	2 cut(s)	885, 1492
Ecl136II	GAGCTC	1 cut(s)	1358
Eco130I	CCWWGG	1 cut(s)	96
Eco147I	AGGCCT	1 cut(s)	101
Eco24I	GRGCYC	1 cut(s)	1360
Eco32I	GATATC	1 cut(s)	229
Eco47I	GGWCC	1 cut(s)	1299
Eco53kI	GAGCTC	1 cut(s)	1358
Eco88I	CYCGRG	1 cut(s)	1286
EcoICRI	GAGCTC	1 cut(s)	1358
EcoRII	CCWGG	4 cut(s)	123, 411, 734, 1084
EcoRV	GATATC	1 cut(s)	229
EcoT14I	CCWWGG	1 cut(s)	96
EcoT22I	ATGCAT	1 cut(s)	401
EcoT38I	GRGCYC	1 cut(s)	1360
ErhI	CCWWGG	1 cut(s)	96
FaeI	CATG	9 cut(s)	194, 284, 503, 699, 801, 963, 1016, 1206, 1354
FaqI	GGGAC	1 cut(s)	1285
FatI	CATG	9 cut(s)	190, 280, 499, 695, 797, 959, 1012, 1202, 1350
FauI	CCCGC	1 cut(s)	538
FauNDI	CATATG	1 cut(s)	558
Fnu4HI	GCNGC	8 cut(s)	69, 177, 375, 554, 564, 693, 996, 1309
FokI	GGATG	5 cut(s)	31, 48, 386, 783, 933
FriOI	GRGCYC	1 cut(s)	1360
Fsp4HI	GCNGC	8 cut(s)	69, 177, 375, 554, 564, 693, 996, 1309
FspBI	CTAG	3 cut(s)	107, 909, 1392
FspI	TGCGCA	1 cut(s)	711
GlaI	GCGC	2 cut(s)	552, 711
GluI	GCNGC	8 cut(s)	69, 177, 375, 554, 564, 693, 996, 1309
GsaI	CCCAGC	1 cut(s)	432
GsuI	CTGGAG	1 cut(s)	240
HaeIII	GGCC	8 cut(s)	101, 186, 323, 529, 846, 995, 1080, 1421
HapII	CCGG	3 cut(s)	48, 1272, 1297
HhaI	GCGC	2 cut(s)	553, 712
Hin1II	CATG	9 cut(s)	194, 284, 503, 699, 801, 963, 1016, 1206, 1354
Hin6I	GCGC	2 cut(s)	551, 710
HinP1I	GCGC	2 cut(s)	551, 710
HindIII	AAGCTT	2 cut(s)	270, 1136
HinfI	GANTC	8 cut(s)	215, 310, 405, 479, 543, 775, 935, 1223
HpaII	CCGG	3 cut(s)	48, 1272, 1297
HphI	GGTGA	2 cut(s)	640, 858
Hpy166II	GTNNAC	2 cut(s)	149, 987
Hpy188I	TCNGA	9 cut(s)	237, 255, 303, 348, 404, 750, 835, 1213, 1222
Hpy188III	TCNNGA	9 cut(s)	89, 219, 393, 500, 514, 1013, 1272, 1330, 1431
Hpy8I	GTNNAC	2 cut(s)	149, 987
HpyAV	CCTTC	4 cut(s)	836, 873, 995, 1467
HpyCH4III	ACNGT	7 cut(s)	575, 634, 644, 984, 991, 1069, 1415
HpyCH4IV	ACGT	2 cut(s)	452, 947
HpyF10VI	GCNNNNNNNGC	3 cut(s)	761, 1086, 1116
HpyF3I	CTNAG	8 cut(s)	11, 180, 236, 318, 624, 1161, 1212, 1304
HpySE526I	ACGT	2 cut(s)	452, 947
Hsp92II	CATG	9 cut(s)	194, 284, 503, 699, 801, 963, 1016, 1206, 1354
HspAI	GCGC	2 cut(s)	551, 710
Kpn2I	TCCGGA	1 cut(s)	1271
Kzo9I	GATC	8 cut(s)	655, 740, 955, 1009, 1151, 1217, 1332, 1448
LmnI	GCTCC	5 cut(s)	52, 1145, 1274, 1355, 1363
Lsp1109I	GCAGC	6 cut(s)	80, 188, 540, 575, 679, 1295
LweI	GCATC	4 cut(s)	53, 255, 386, 408
MaeI	CTAG	3 cut(s)	107, 909, 1392
MaeII	ACGT	2 cut(s)	452, 947
MaeIII	GTNAC	4 cut(s)	113, 284, 575, 628
MalI	GATC	8 cut(s)	657, 742, 957, 1011, 1153, 1219, 1334, 1450
MbiI	CCGCTC	1 cut(s)	55
MboI	GATC	8 cut(s)	655, 740, 955, 1009, 1151, 1217, 1332, 1448
MboII	GAAGA	5 cut(s)	488, 872, 913, 1200, 1479
MfeI	CAATTG	1 cut(s)	651
MflI	RGATCY	2 cut(s)	740, 955
MhlI	GDGCHC	2 cut(s)	989, 1360
MlsI	TGGCCA	1 cut(s)	1421
MluCI	AATT	9 cut(s)	5, 25, 154, 241, 327, 519, 651, 723, 1495
MluNI	TGGCCA	1 cut(s)	1421
MlyI	GAGTC	3 cut(s)	224, 399, 769
MmeI	TCCRAC	1 cut(s)	427
Mox20I	TGGCCA	1 cut(s)	1421
Mph1103I	ATGCAT	1 cut(s)	401
MroI	TCCGGA	1 cut(s)	1271
MscI	TGGCCA	1 cut(s)	1421
MseI	TTAA	6 cut(s)	455, 495, 522, 1235, 1368, 1498
MslI	CAYNNNNRTG	1 cut(s)	34
Msp20I	TGGCCA	1 cut(s)	1421
MspA1I	CMGCKG	2 cut(s)	533, 1308
MspI	CCGG	3 cut(s)	48, 1272, 1297
MspR9I	CCNGG	5 cut(s)	49, 125, 413, 736, 1086
MunI	CAATTG	1 cut(s)	651
Mva1269I	GAATGC	3 cut(s)	466, 757, 1174
MvaI	CCWGG	4 cut(s)	125, 413, 736, 1086
MvnI	CGCG	2 cut(s)	249, 1097
MwoI	GCNNNNNNNGC	3 cut(s)	761, 1086, 1116
NciI	CCSGG	1 cut(s)	49
NdeI	CATATG	1 cut(s)	558
NdeII	GATC	8 cut(s)	655, 740, 955, 1009, 1151, 1217, 1332, 1448
NlaIII	CATG	9 cut(s)	194, 284, 503, 699, 801, 963, 1016, 1206, 1354
NlaIV	GGNNCC	5 cut(s)	742, 1081, 1301, 1383, 1412
NmuCI	GTSAC	3 cut(s)	284, 575, 628
NsbI	TGCGCA	1 cut(s)	711
NsiI	ATGCAT	1 cut(s)	401
NspI	RCATGY	2 cut(s)	699, 1206
PaeI	GCATGC	1 cut(s)	699
PagI	TCATGA	2 cut(s)	499, 1012
PceI	AGGCCT	1 cut(s)	101
PciI	ACATGT	1 cut(s)	1202
PcsI	WCGNNNNNNNCGW	1 cut(s)	400
PctI	GAATGC	3 cut(s)	466, 757, 1174
PfeI	GAWTC	5 cut(s)	310, 479, 543, 935, 1223
PflMI	CCANNNNNTGG	1 cut(s)	771
PkrI	GCNGC	8 cut(s)	70, 178, 376, 555, 565, 694, 997, 1310
Ple19I	CGATCG	1 cut(s)	1451
PleI	GAGTC	3 cut(s)	223, 399, 769
PpsI	GAGTC	3 cut(s)	223, 399, 769
Ppu21I	YACGTR	1 cut(s)	948
PscI	ACATGT	1 cut(s)	1202
PshBI	ATTAAT	2 cut(s)	522, 1368
Psp124BI	GAGCTC	1 cut(s)	1360
Psp6I	CCWGG	4 cut(s)	123, 411, 734, 1084
PspFI	CCCAGC	1 cut(s)	428
PspGI	CCWGG	4 cut(s)	123, 411, 734, 1084
PspN4I	GGNNCC	5 cut(s)	742, 1081, 1301, 1383, 1412
PspPI	GGNCC	4 cut(s)	184, 528, 1079, 1299
PstI	CTGCAG	2 cut(s)	178, 439
PsuI	RGATCY	2 cut(s)	740, 955
PvuI	CGATCG	1 cut(s)	1451
PvuII	CAGCTG	1 cut(s)	1308
RsaI	GTAC	4 cut(s)	134, 150, 358, 1040
RsaNI	GTAC	4 cut(s)	133, 149, 357, 1039
RseI	CAYNNNNRTG	1 cut(s)	34
SacI	GAGCTC	1 cut(s)	1360
SaqAI	TTAA	6 cut(s)	455, 495, 522, 1235, 1368, 1498
SatI	GCNGC	8 cut(s)	69, 177, 375, 554, 564, 693, 996, 1309
Sau3AI	GATC	8 cut(s)	655, 740, 955, 1009, 1151, 1217, 1332, 1448
Sau96I	GGNCC	4 cut(s)	184, 528, 1079, 1299
SchI	GAGTC	3 cut(s)	224, 399, 769
ScrFI	CCNGG	5 cut(s)	49, 125, 413, 736, 1086
SduI	GDGCHC	2 cut(s)	989, 1360
SfaNI	GCATC	4 cut(s)	53, 255, 386, 408
SfcI	CTRYAG	2 cut(s)	174, 435
SinI	GGWCC	1 cut(s)	1299
SmiMI	CAYNNNNRTG	1 cut(s)	34
SmlI	CTYRAG	2 cut(s)	212, 815
SmoI	CTYRAG	2 cut(s)	212, 815
SphI	GCATGC	1 cut(s)	699
Sse9I	AATT	9 cut(s)	5, 25, 154, 241, 327, 519, 651, 723, 1495
SseBI	AGGCCT	1 cut(s)	101
SsiI	CCGC	8 cut(s)	55, 249, 354, 375, 531, 699, 996, 1408
SspI	AATATT	1 cut(s)	1366
SspMI	CTAG	3 cut(s)	107, 909, 1392
SstI	GAGCTC	1 cut(s)	1360
StuI	AGGCCT	1 cut(s)	101
StyD4I	CCNGG	5 cut(s)	47, 123, 411, 734, 1084
StyI	CCWWGG	1 cut(s)	96
TaaI	ACNGT	7 cut(s)	575, 634, 644, 984, 991, 1069, 1415
TaiI	ACGT	2 cut(s)	455, 950
TaqI	TCGA	3 cut(s)	394, 1141, 1399
TaqII	GACCGA	1 cut(s)	783
TasI	AATT	9 cut(s)	5, 25, 154, 241, 327, 519, 651, 723, 1495
TauI	GCSGC	2 cut(s)	377, 998
TfiI	GAWTC	5 cut(s)	310, 479, 543, 935, 1223
Tru1I	TTAA	6 cut(s)	455, 495, 522, 1235, 1368, 1498
Tru9I	TTAA	6 cut(s)	455, 495, 522, 1235, 1368, 1498
TscAI	CASTG	6 cut(s)	293, 439, 553, 573, 989, 996
TseFI	GTSAC	3 cut(s)	284, 575, 628
TseI	GCWGC	6 cut(s)	68, 176, 553, 563, 692, 1308
Tsp45I	GTSAC	3 cut(s)	284, 575, 628
TspDTI	ATGAA	6 cut(s)	17, 18, 489, 914, 1116, 1479
TspRI	CASTG	6 cut(s)	293, 439, 553, 573, 989, 996
Van91I	CCANNNNNTGG	1 cut(s)	771
VneI	GTGCAC	1 cut(s)	985
VpaK11BI	GGWCC	1 cut(s)	1299
VspI	ATTAAT	2 cut(s)	522, 1368
XapI	RAATTY	3 cut(s)	5, 25, 723
XceI	RCATGY	2 cut(s)	699, 1206
XspI	CTAG	3 cut(s)	107, 909, 1392
Zsp2I	ATGCAT	1 cut(s)	401

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.