MD17G1104000.v1.1

Belongs to the glycosyl hydrolase 17 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0015945
Physical Location & Seq
Forward (+)
8805390 .. 8808337
2948 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1104000.v1.1.491

Sequence Viewer

Length: 1428 bp
ATGCTCTGCTTCTCCAAGAACCAGAGTATGGAACGCCACGTCATCGCCGTCGTGCTTCTCCTTTCCGTCTTTTCATCTCTAGCAGATGCGGGCTCGGTGGGAGTGAACTATGGCAGAATCGCAGACAACCTGCCGTCGGCGTACAAGGTGGTGCAGCTTCTGAAATCCCAAGGCTTGGAGCGGGTGAAGGTCTTCGACTCCGACCCGGCCGTGCTCCGGGCCCTGTCAGGATCTGACATTAAAGTCACCGTCGACCTCCCCAATGAGCTCCTCTCAGCCGCCGCCAAGTCGCAGTCGTACGCCACCAACTGGGTCCAGCGAAATGTCGTCGCTTACCACCCCAACACCCAGATCGAAGCCATCGGCGTCGGTAACGAGGTCTTCGTCGACACCCACGACACCACCAAGTTCCTCATCTCCGCCATGAAAAACATCCACGCTGCCCTTGTCCACTTCAAGCTTGAGTCCTCCATCAAAGTCTCCTCGCCCATTGCCCTCAGCGCCCTTCAAAACTCCTACCCGTCCTCCGCCGGGTCATTCCGACCTGAACTCGTGGAACCCGTTTTCAAGCCCATGCTTGAGTTTCTCCGTCAAACCGGGTCCTACCTCATGGTCAACTGCTACCCTTACTTCGCTTACGAGTCAAACTCCGACGTCATCCCCTTGGACTACGCCCTATTCCACCAAAACCCCGGAGTCGTAGACGCCGGCAACGGTCTCCGTTACTTCAACCTCTTTGACGCCCAGATCGACGCCGTTTTCGCCGCCATGTCGGCGTTGAAGTACGACGACATCAACATGGTCGTGTCGGAAACGGGCTGGCCTTCGAAAGGCGACTCGGTTGAAGTAGGCGCGAGCGTGGAGAACGCAGCCGCCTACAACGGCAACCTCGTCCGTCGGATCTTGACCGGCGGTGGGACCCCGTTGAGGCCTAAAGCAGAATTGACCGTCTATCTCTTCGCGCTCTTCAACGAGGACAAGAAATTCGGGCCCACATCGGAGAGAAACTACGGTCTCTTCTTCCCCAACGAGCGCAAGGTATACGACATACCGTTTACCGTCGAGGGACTAAAGAACTATCACGACAGCCGGTCGCCGGTATCAGGAAACCAGCAGGTGACTGCTCCGGTCAACGGGGGAGGAGACTTGTCGAAGAGCTTAACCGGAAACACGTGGTGCGTGGCGAATGGTGAGGCGGGGAAGGAGAAGCTGCAGGCGGGTATAGACTACGCTTGCGGTGAGGGCGGGGCGGACTGCCATCAGATCCAGCCGGGGTCTGCGTGTTACGATCCTAACACCCTCGAGGCCCACGCCTCGTACGCCTTCAACAGTTACTACCAGAAGAAGGCACGTGGGGTCGGCACGTGCTATTTTGGCGGGGCAGCCTACGTGGTCTCTCAACCACCCAGTACAGTTTGGGAAATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyco_hydro_17 X8

Protein Analysis

476

Amino Acids

51.55

Weight (kDa)

5.65

Isoelectric Point (pI)

32.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_17 PF00332 33 - 352 6.1e-89 Glycosyl hydrolases family 17
X8 PF07983 391 - 462 2.8e-22 X8 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015945)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G05790
fragaria_vesca FvH4_6g42190
malus_domestica MD09G1113900.v1.1 MD17G1104000.v1.1
prunus_persica Prupe.3G210700_v2.0.a1
pyrus_communis pycom09g03790
rosa_chinensis RchiOBHm_Chr2g0158111
rosa_laevigata RLG00000021060
rosa_multiflora Rmu_sc0005982.1_g000010
rosa_roxburghii Rroxscaffold_2G00091660
rosa_samantha Rh2AG532100 Rh2BG546200 Rh2CG516000 Rh2DG554700
rosa_wichuraiana Rw2G043990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1105
AasI GACNNNNNNGTC 1 cut(s) 242
AatII GACGTC 1 cut(s) 657
AbsI CCTCGAGG 1 cut(s) 1301
Acc36I ACCTGC 2 cut(s) 138, 1105
AccB7I CCANNNNNTGG 3 cut(s) 28, 175, 309
AccBSI CCGCTC 1 cut(s) 181
AccI GTMKAC 4 cut(s) 252, 387, 702, 1041
AccII CGCG 2 cut(s) 854, 962
AclWI GGATC 4 cut(s) 238, 908, 1258, 1283
AcoI YGGCCR 1 cut(s) 207
AcsI RAATTY 1 cut(s) 983
AcvI CACGTG 3 cut(s) 1173, 1352, 1365
AcyI GRCGYC 5 cut(s) 366, 654, 705, 741, 753
AdeI CACNNNGTG 1 cut(s) 1176
AfaI GTAC 5 cut(s) 143, 299, 785, 1319, 1411
AflIII ACRYGT 1 cut(s) 1170
AgsI TTSAA 8 cut(s) 457, 509, 568, 730, 781, 845, 970, 1327
AhdI GACNNNNNGTC 1 cut(s) 1090
AjiI CACGTC 1 cut(s) 40
AluBI AGCT 5 cut(s) 157, 268, 460, 1158, 1210
AluI AGCT 5 cut(s) 157, 268, 460, 1158, 1210
Alw21I GWGCWC 2 cut(s) 216, 270
Alw26I GTCTC 5 cut(s) 484, 722, 1019, 1137, 1399
AlwI GGATC 4 cut(s) 238, 908, 1258, 1283
AlwNI CAGNNNCTG 2 cut(s) 160, 233
Ama87I CYCGRG 1 cut(s) 1301
AoxI GGCC 6 cut(s) 207, 219, 821, 929, 989, 1305
ApaI GGGCCC 2 cut(s) 223, 993
ApeKI GCWGC 5 cut(s) 154, 440, 869, 1210, 1382
ApoI RAATTY 1 cut(s) 983
ArsI GACNNNNNNTTYG 4 cut(s) 743, 775, 968, 1000
Asp700I GAANNNNTTC 1 cut(s) 191
AspLEI GCGC 4 cut(s) 503, 854, 964, 1035
AspS9I GGNCC 8 cut(s) 219, 220, 313, 600, 918, 989, 990, 1306
AsuC2I CCSGG 6 cut(s) 206, 218, 532, 598, 693, 1272
AsuHPI GGTGA 5 cut(s) 196, 238, 1129, 1202, 1250
AsuII TTCGAA 1 cut(s) 827
AvaI CYCGRG 1 cut(s) 1301
AvaII GGWCC 3 cut(s) 313, 600, 918
BaeGI GKGCMC 2 cut(s) 223, 993
BanII GRGCYC 4 cut(s) 95, 223, 270, 993
BauI CACGAG 1 cut(s) 551
BbrPI CACGTG 3 cut(s) 1173, 1352, 1365
BbsI GAAGAC 2 cut(s) 184, 373
Bbv12I GWGCWC 2 cut(s) 216, 270
BbvCI CCTCAGC 1 cut(s) 497
BbvI GCAGC 5 cut(s) 166, 427, 881, 1197, 1394
BccI CCATC 3 cut(s) 368, 479, 1266
BceAI ACGGC 5 cut(s) 32, 118, 194, 740, 898
BcnI CCSGG 6 cut(s) 206, 218, 532, 598, 693, 1272
BcoDI GTCTC 5 cut(s) 484, 722, 1019, 1137, 1399
BfaI CTAG 1 cut(s) 80
BfmI CTRYAG 1 cut(s) 1211
BfoI RGCGCY 1 cut(s) 504
BfuAI ACCTGC 2 cut(s) 138, 1105
BglI GCCNNNNNGGC 1 cut(s) 773
BisI GCNGC 9 cut(s) 155, 279, 282, 441, 765, 870, 873, 1211, 1383
BlsI GCNGC 9 cut(s) 156, 280, 283, 442, 766, 871, 874, 1212, 1384
Bme1390I CCNGG 6 cut(s) 206, 218, 532, 598, 693, 1272
Bme18I GGWCC 3 cut(s) 313, 600, 918
BmeRI GACNNNNNGTC 1 cut(s) 1090
BmeT110I CYCGRG 1 cut(s) 1301
BmgBI CACGTC 1 cut(s) 40
BmgT120I GGNCC 8 cut(s) 219, 220, 313, 600, 918, 989, 990, 1306
BmiI GGNNCC 7 cut(s) 221, 314, 558, 601, 919, 920, 991
BmrFI CCNGG 6 cut(s) 206, 218, 532, 598, 693, 1272
BmrI ACTGGG 2 cut(s) 319, 1401
BmsI GCATC 1 cut(s) 76
BmuI ACTGGG 2 cut(s) 319, 1401
BpiI GAAGAC 2 cut(s) 184, 373
BplI GAGNNNNNCTC 4 cut(s) 257, 289, 632, 664
Bpu10I CCTNAGC 1 cut(s) 497
Bpu14I TTCGAA 1 cut(s) 827
BpuEI CTTGAG 2 cut(s) 482, 599
BpuMI CCSGG 6 cut(s) 206, 218, 532, 598, 693, 1272
BsaAI YACGTR 4 cut(s) 1173, 1352, 1365, 1390
BsaHI GRCGYC 5 cut(s) 366, 654, 705, 741, 753
BsaI GGTCTC 3 cut(s) 722, 1019, 1399
BsaJI CCNNGG 4 cut(s) 169, 663, 691, 1271
BsaWI WCCGGW 2 cut(s) 1126, 1163
BsaXI ACNNNNNCTCC 2 cut(s) 509, 539
Bse118I RCCGGY 4 cut(s) 707, 908, 1089, 1096
Bse1I ACTGG 2 cut(s) 314, 1407
Bse3DI GCAATG 1 cut(s) 489
BseDI CCNNGG 4 cut(s) 169, 663, 691, 1271
BseGI GGATG 2 cut(s) 432, 657
BseMI GCAATG 1 cut(s) 489
BseMII CTCAG 2 cut(s) 288, 511
BseNI ACTGG 2 cut(s) 314, 1407
BseRI GAGGAG 3 cut(s) 260, 472, 1155
BseSI GKGCMC 2 cut(s) 223, 993
BseX3I CGGCCG 1 cut(s) 207
BseXI GCAGC 5 cut(s) 166, 427, 881, 1197, 1394
BsgI GTGCAG 1 cut(s) 173
Bsh1236I CGCG 2 cut(s) 854, 962
Bsh1285I CGRYCG 2 cut(s) 210, 1094
BshFI GGCC 6 cut(s) 209, 221, 823, 931, 991, 1307
BsiEI CGRYCG 2 cut(s) 210, 1094
BsiHKAI GWGCWC 2 cut(s) 216, 270
BsiHKCI CYCGRG 1 cut(s) 1301
BsiWI CGTACG 2 cut(s) 297, 1317
BslFI GGGAC 2 cut(s) 931, 1080
BsmAI GTCTC 5 cut(s) 484, 722, 1019, 1137, 1399
BsmFI GGGAC 2 cut(s) 931, 1080
BsnI GGCC 6 cut(s) 209, 221, 823, 931, 991, 1307
Bso31I GGTCTC 3 cut(s) 722, 1019, 1399
BsoBI CYCGRG 1 cut(s) 1301
Bsp119I TTCGAA 1 cut(s) 827
Bsp120I GGGCCC 2 cut(s) 219, 989
Bsp1286I GDGCHC 5 cut(s) 95, 216, 223, 270, 993
Bsp143I GATC 6 cut(s) 230, 351, 747, 900, 1263, 1288
BspANI GGCC 6 cut(s) 209, 221, 823, 931, 991, 1307
BspCNI CTCAG 2 cut(s) 287, 510
BspFNI CGCG 2 cut(s) 854, 962
BspLI GGNNCC 7 cut(s) 221, 314, 558, 601, 919, 920, 991
BspMAI CTGCAG 1 cut(s) 1215
BspMI ACCTGC 2 cut(s) 138, 1105
BspPI GGATC 4 cut(s) 238, 908, 1258, 1283
BspQI GCTCTTC 2 cut(s) 971, 1148
BspT104I TTCGAA 1 cut(s) 827
BspTNI GGTCTC 3 cut(s) 722, 1019, 1399
BsrBI CCGCTC 1 cut(s) 181
BsrDI GCAATG 1 cut(s) 489
BsrFI RCCGGY 4 cut(s) 707, 908, 1089, 1096
BsrI ACTGG 2 cut(s) 314, 1407
BssAI RCCGGY 4 cut(s) 707, 908, 1089, 1096
BssECI CCNNGG 4 cut(s) 169, 663, 691, 1271
BssMI GATC 6 cut(s) 230, 351, 747, 900, 1263, 1288
BssNAI GTATAC 1 cut(s) 1042
BssNI GRCGYC 5 cut(s) 366, 654, 705, 741, 753
BssSI CACGAG 1 cut(s) 551
BssT1I CCWWGG 2 cut(s) 169, 663
Bst1107I GTATAC 1 cut(s) 1042
Bst2BI CACGAG 1 cut(s) 551
Bst4CI ACNGT 8 cut(s) 250, 716, 949, 1013, 1053, 1060, 1331, 1414
Bst6I CTCTTC 4 cut(s) 962, 971, 1022, 1148
BstACI GRCGYC 5 cut(s) 366, 654, 705, 741, 753
BstBAI YACGTR 4 cut(s) 1173, 1352, 1365, 1390
BstBI TTCGAA 1 cut(s) 827
BstC8I GCNNGC 6 cut(s) 91, 709, 821, 856, 1215, 1234
BstDEI CTNAG 2 cut(s) 274, 497
BstENI CCTNNNNNAGG 1 cut(s) 828
BstF5I GGATG 2 cut(s) 432, 657
BstFNI CGCG 2 cut(s) 854, 962
BstH2I RGCGCY 1 cut(s) 504
BstHHI GCGC 4 cut(s) 503, 854, 964, 1035
BstKTI GATC 6 cut(s) 233, 354, 750, 903, 1266, 1291
BstMAI GTCTC 5 cut(s) 484, 722, 1019, 1137, 1399
BstMBI GATC 6 cut(s) 230, 351, 747, 900, 1263, 1288
BstMCI CGRYCG 2 cut(s) 210, 1094
BstMWI GCNNNNNNNGC 6 cut(s) 500, 761, 773, 1242, 1319, 1374
BstSCI CCNGG 6 cut(s) 204, 216, 530, 596, 691, 1270
BstSFI CTRYAG 1 cut(s) 1211
BstSLI GKGCMC 2 cut(s) 223, 993
BstUI CGCG 2 cut(s) 854, 962
BstV1I GCAGC 5 cut(s) 166, 427, 881, 1197, 1394
BstV2I GAAGAC 2 cut(s) 184, 373
BstX2I RGATCY 3 cut(s) 230, 900, 1263
BstYI RGATCY 3 cut(s) 230, 900, 1263
BstZ17I GTATAC 1 cut(s) 1042
BstZI CGGCCG 1 cut(s) 207
BsuRI GGCC 6 cut(s) 209, 221, 823, 931, 991, 1307
BtgZI GCGATG 1 cut(s) 28
BtrI CACGTC 1 cut(s) 40
BtsCI GGATG 2 cut(s) 432, 657
BveI ACCTGC 2 cut(s) 138, 1105
Cac8I GCNNGC 6 cut(s) 91, 709, 821, 856, 1215, 1234
CaiI CAGNNNCTG 2 cut(s) 160, 233
CfoI GCGC 4 cut(s) 503, 854, 964, 1035
Cfr10I RCCGGY 4 cut(s) 707, 908, 1089, 1096
Cfr13I GGNCC 8 cut(s) 219, 220, 313, 600, 918, 989, 990, 1306
CseI GACGC 4 cut(s) 355, 713, 749, 761
Csp6I GTAC 5 cut(s) 142, 298, 784, 1318, 1410
CviAII CATG 5 cut(s) 424, 574, 610, 769, 799
CviQI GTAC 5 cut(s) 142, 298, 784, 1318, 1410
DdeI CTNAG 2 cut(s) 274, 497
DpnI GATC 6 cut(s) 232, 353, 749, 902, 1265, 1290
DpnII GATC 6 cut(s) 230, 351, 747, 900, 1263, 1288
DraIII CACNNNGTG 1 cut(s) 1176
DrdI GACNNNNNNGTC 1 cut(s) 242
DriI GACNNNNNGTC 1 cut(s) 1090
DseDI GACNNNNNNGTC 1 cut(s) 242
EaeI YGGCCR 1 cut(s) 207
EagI CGGCCG 1 cut(s) 207
Eam1104I CTCTTC 4 cut(s) 962, 971, 1022, 1148
Eam1105I GACNNNNNGTC 1 cut(s) 1090
EarI CTCTTC 4 cut(s) 962, 971, 1022, 1148
EciI GGCGGA 3 cut(s) 409, 517, 1265
Ecl136II GAGCTC 1 cut(s) 268
EclXI CGGCCG 1 cut(s) 207
Eco130I CCWWGG 2 cut(s) 169, 663
Eco147I AGGCCT 1 cut(s) 931
Eco24I GRGCYC 4 cut(s) 95, 223, 270, 993
Eco31I GGTCTC 3 cut(s) 722, 1019, 1399
Eco47I GGWCC 3 cut(s) 313, 600, 918
Eco52I CGGCCG 1 cut(s) 207
Eco53kI GAGCTC 1 cut(s) 268
Eco72I CACGTG 3 cut(s) 1173, 1352, 1365
Eco88I CYCGRG 1 cut(s) 1301
EcoICRI GAGCTC 1 cut(s) 268
EcoNI CCTNNNNNAGG 1 cut(s) 828
EcoO109I RGGNCCY 3 cut(s) 220, 600, 918
EcoT14I CCWWGG 2 cut(s) 169, 663
EcoT38I GRGCYC 4 cut(s) 95, 223, 270, 993
ErhI CCWWGG 2 cut(s) 169, 663
FaeI CATG 5 cut(s) 427, 577, 613, 772, 802
FaqI GGGAC 2 cut(s) 931, 1080
FatI CATG 5 cut(s) 423, 573, 609, 768, 798
FauI CCCGC 6 cut(s) 82, 174, 1189, 1210, 1238, 1370
FblI GTMKAC 4 cut(s) 252, 387, 702, 1041
Fnu4HI GCNGC 9 cut(s) 155, 279, 282, 441, 765, 870, 873, 1211, 1383
FokI GGATG 2 cut(s) 419, 644
FriOI GRGCYC 4 cut(s) 95, 223, 270, 993
Fsp4HI GCNGC 9 cut(s) 155, 279, 282, 441, 765, 870, 873, 1211, 1383
FspBI CTAG 1 cut(s) 80
GlaI GCGC 4 cut(s) 502, 853, 963, 1034
GluI GCNGC 9 cut(s) 155, 279, 282, 441, 765, 870, 873, 1211, 1383
HaeII RGCGCY 1 cut(s) 504
HaeIII GGCC 6 cut(s) 209, 221, 823, 931, 991, 1307
HgaI GACGC 4 cut(s) 355, 713, 749, 761
HhaI GCGC 4 cut(s) 503, 854, 964, 1035
Hin1I GRCGYC 5 cut(s) 366, 654, 705, 741, 753
Hin1II CATG 5 cut(s) 427, 577, 613, 772, 802
Hin6I GCGC 4 cut(s) 501, 852, 962, 1033
HinP1I GCGC 4 cut(s) 501, 852, 962, 1033
HincII GTYRAC 4 cut(s) 253, 388, 616, 1132
HindII GTYRAC 4 cut(s) 253, 388, 616, 1132
HindIII AAGCTT 1 cut(s) 458
HinfI GANTC 6 cut(s) 117, 197, 464, 641, 696, 836
HphI GGTGA 5 cut(s) 196, 238, 1129, 1202, 1250
Hpy166II GTNNAC 9 cut(s) 106, 253, 388, 451, 616, 703, 1042, 1056, 1132
Hpy188I TCNGA 9 cut(s) 162, 202, 235, 542, 652, 811, 900, 1000, 1263
Hpy188III TCNNGA 4 cut(s) 228, 904, 1082, 1104
Hpy8I GTNNAC 9 cut(s) 106, 253, 388, 451, 616, 703, 1042, 1056, 1132
HpyAV CCTTC 6 cut(s) 181, 515, 834, 1195, 1333, 1339
HpyCH4III ACNGT 8 cut(s) 250, 716, 949, 1013, 1053, 1060, 1331, 1414
HpyCH4IV ACGT 6 cut(s) 39, 654, 1172, 1351, 1364, 1389
HpyCH4V TGCA 2 cut(s) 154, 1213
HpyF10VI GCNNNNNNNGC 6 cut(s) 500, 761, 773, 1242, 1319, 1374
HpyF3I CTNAG 2 cut(s) 274, 497
HpySE526I ACGT 6 cut(s) 39, 654, 1172, 1351, 1364, 1389
Hsp92I GRCGYC 5 cut(s) 366, 654, 705, 741, 753
Hsp92II CATG 5 cut(s) 427, 577, 613, 772, 802
HspAI GCGC 4 cut(s) 501, 852, 962, 1033
KflI GGGWCCC 1 cut(s) 918
KroI GCCGGC 1 cut(s) 707
KroNI GCCGGC 1 cut(s) 709
Kzo9I GATC 6 cut(s) 230, 351, 747, 900, 1263, 1288
LguI GCTCTTC 2 cut(s) 971, 1148
LmnI GCTCC 4 cut(s) 178, 219, 273, 1129
Lsp1109I GCAGC 5 cut(s) 166, 427, 881, 1197, 1394
LweI GCATC 1 cut(s) 76
MaeI CTAG 1 cut(s) 80
MaeII ACGT 6 cut(s) 39, 654, 1172, 1351, 1364, 1389
MaeIII GTNAC 6 cut(s) 244, 371, 722, 1117, 1283, 1331
MalI GATC 6 cut(s) 232, 353, 749, 902, 1265, 1290
MbiI CCGCTC 1 cut(s) 181
MboI GATC 6 cut(s) 230, 351, 747, 900, 1263, 1288
MboII GAAGA 8 cut(s) 184, 373, 949, 958, 1009, 1012, 1165, 1354
MflI RGATCY 3 cut(s) 230, 900, 1263
MhlI GDGCHC 5 cut(s) 95, 216, 223, 270, 993
MluCI AATT 2 cut(s) 941, 983
MlyI GAGTC 5 cut(s) 191, 473, 650, 705, 830
MmeI TCCRAC 5 cut(s) 225, 565, 675, 789, 878
MroNI GCCGGC 1 cut(s) 707
MroXI GAANNNNTTC 1 cut(s) 191
MseI TTAA 2 cut(s) 240, 1160
MslI CAYNNNNRTG 2 cut(s) 797, 803
MspR9I CCNGG 6 cut(s) 206, 218, 532, 598, 693, 1272
MvnI CGCG 2 cut(s) 854, 962
MwoI GCNNNNNNNGC 6 cut(s) 500, 761, 773, 1242, 1319, 1374
NaeI GCCGGC 1 cut(s) 709
NciI CCSGG 6 cut(s) 206, 218, 532, 598, 693, 1272
NdeII GATC 6 cut(s) 230, 351, 747, 900, 1263, 1288
NgoMIV GCCGGC 1 cut(s) 707
NlaIII CATG 5 cut(s) 427, 577, 613, 772, 802
NlaIV GGNNCC 7 cut(s) 221, 314, 558, 601, 919, 920, 991
NmuCI GTSAC 2 cut(s) 244, 1117
NspV TTCGAA 1 cut(s) 827
PaeR7I CTCGAG 1 cut(s) 1301
PaqCI CACCTGC 1 cut(s) 1105
PceI AGGCCT 1 cut(s) 931
PciSI GCTCTTC 2 cut(s) 971, 1148
PcsI WCGNNNNNNNCGW 6 cut(s) 45, 381, 393, 558, 747, 888
PdiI GCCGGC 1 cut(s) 709
PdmI GAANNNNTTC 1 cut(s) 191
PfeI GAWTC 1 cut(s) 117
Pfl23II CGTACG 2 cut(s) 297, 1317
PflMI CCANNNNNTGG 3 cut(s) 28, 175, 309
PkrI GCNGC 9 cut(s) 156, 280, 283, 442, 766, 871, 874, 1212, 1384
PleI GAGTC 5 cut(s) 191, 472, 649, 704, 830
PmaCI CACGTG 3 cut(s) 1173, 1352, 1365
PmlI CACGTG 3 cut(s) 1173, 1352, 1365
PpsI GAGTC 5 cut(s) 191, 472, 649, 704, 830
Ppu21I YACGTR 4 cut(s) 1173, 1352, 1365, 1390
PpuMI RGGWCCY 2 cut(s) 600, 918
Psp124BI GAGCTC 1 cut(s) 270
Psp5II RGGWCCY 2 cut(s) 600, 918
PspCI CACGTG 3 cut(s) 1173, 1352, 1365
PspLI CGTACG 2 cut(s) 297, 1317
PspN4I GGNNCC 7 cut(s) 221, 314, 558, 601, 919, 920, 991
PspOMI GGGCCC 2 cut(s) 219, 989
PspPI GGNCC 8 cut(s) 219, 220, 313, 600, 918, 989, 990, 1306
PspPPI RGGWCCY 2 cut(s) 600, 918
PspXI VCTCGAGB 1 cut(s) 1301
PstI CTGCAG 1 cut(s) 1215
PstNI CAGNNNCTG 2 cut(s) 160, 233
PsuI RGATCY 3 cut(s) 230, 900, 1263
RsaI GTAC 5 cut(s) 143, 299, 785, 1319, 1411
RsaNI GTAC 5 cut(s) 142, 298, 784, 1318, 1410
RseI CAYNNNNRTG 2 cut(s) 797, 803
SacI GAGCTC 1 cut(s) 270
SalI GTCGAC 2 cut(s) 251, 386
SapI GCTCTTC 2 cut(s) 971, 1148
SaqAI TTAA 2 cut(s) 240, 1160
SatI GCNGC 9 cut(s) 155, 279, 282, 441, 765, 870, 873, 1211, 1383
Sau3AI GATC 6 cut(s) 230, 351, 747, 900, 1263, 1288
Sau96I GGNCC 8 cut(s) 219, 220, 313, 600, 918, 989, 990, 1306
SchI GAGTC 5 cut(s) 191, 473, 650, 705, 830
ScrFI CCNGG 6 cut(s) 206, 218, 532, 598, 693, 1272
SduI GDGCHC 5 cut(s) 95, 216, 223, 270, 993
SfaNI GCATC 1 cut(s) 76
SfcI CTRYAG 1 cut(s) 1211
Sfr274I CTCGAG 1 cut(s) 1301
SfuI TTCGAA 1 cut(s) 827
SinI GGWCC 3 cut(s) 313, 600, 918
SlaI CTCGAG 1 cut(s) 1301
SmiMI CAYNNNNRTG 2 cut(s) 797, 803
SmlI CTYRAG 3 cut(s) 461, 578, 1301
SmoI CTYRAG 3 cut(s) 461, 578, 1301
Sse9I AATT 2 cut(s) 941, 983
SseBI AGGCCT 1 cut(s) 931
SspMI CTAG 1 cut(s) 80
SstI GAGCTC 1 cut(s) 270
StuI AGGCCT 1 cut(s) 931
StyD4I CCNGG 6 cut(s) 204, 216, 530, 596, 691, 1270
StyI CCWWGG 2 cut(s) 169, 663
TaaI ACNGT 8 cut(s) 250, 716, 949, 1013, 1053, 1060, 1331, 1414
TaiI ACGT 6 cut(s) 42, 657, 1175, 1354, 1367, 1392
TaqI TCGA 9 cut(s) 195, 252, 354, 387, 750, 827, 1062, 1151, 1302
TasI AATT 2 cut(s) 941, 983
TatI WGTACW 1 cut(s) 1409
TauI GCSGC 4 cut(s) 281, 284, 767, 875
TfiI GAWTC 1 cut(s) 117
Tru1I TTAA 2 cut(s) 240, 1160
Tru9I TTAA 2 cut(s) 240, 1160
TseFI GTSAC 2 cut(s) 244, 1117
TseI GCWGC 5 cut(s) 154, 440, 869, 1210, 1382
Tsp45I GTSAC 2 cut(s) 244, 1117
TspDTI ATGAA 2 cut(s) 63, 440
TspGWI ACGGA 4 cut(s) 55, 578, 710, 884
Van91I CCANNNNNTGG 3 cut(s) 28, 175, 309
VpaK11BI GGWCC 3 cut(s) 313, 600, 918
XagI CCTNNNNNAGG 1 cut(s) 828
XapI RAATTY 1 cut(s) 983
XhoI CTCGAG 1 cut(s) 1301
XmiI GTMKAC 4 cut(s) 252, 387, 702, 1041
XmnI GAANNNNTTC 1 cut(s) 191
XspI CTAG 1 cut(s) 80
ZraI GACGTC 1 cut(s) 655
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.