pycom09g03790

Belongs to the glycosyl hydrolase 17 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
OG0015945
Physical Location & Seq
Forward (+)
2816928 .. 2819294
2367 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g03790.3

Sequence Viewer

Length: 1689 bp
ATGGAGGTGAAGGCCCAAAGCCCAAGTGGAGGAGAAGATGGTCGATTGGGCCGTTGCGTCAAACACGTGGGTCCCGCCATCTCGATCCCCACGTTATTTCGCCAAAGTCATAAAACCCCCCCCCCCCCCCCTCCCTTCTCTCCTCACTTCCCCCCACCTCCTCACTGTCACTCACTCCCTCTGCCGTACAAAATTACAAAGATAAGCCAGAAGAGGAAAAAAGAAGAAGCTCTCCACCCTTCACACTGCTTCTCCAAGAACAAGAGCATGGAACGCCATGTCGTCGCCGTCCTGCTCCTCCTTTCTGTCTTTTCATCTCTAGCTGATGCGGCCTCGGTCGGAGTGAACTATGGTAGAATAGCCGACAACCTGCCGTCGGCGTACAAGGTGGTGCAGCTTCTGAAGTCACAAGGCTTGGAGCGGGTCAAGGTCTTCGACTCCGACCCGGCCGTGCTCCGTGCCCTAGCTGGATCCGACATCAAGGTCACCGTCGACCTGCCCAACGAGCTCCTCTCCTCCGCCGCCAAGTCTCAGTCTTTCGCTACCAACTGGGTCCAGCGAAACGTTGTCGCTTACCACCCCAACACCCAGATCGAAGCTATCGGCGTTGGCAATGAGGTCTTCGTTGACACCCACAACACCACCAAGTTCCTCATCTCCGCTATGAAAAACATCCACACCGCCCTCGTCCACTTCAAGCTCGAGTCCTCCATCAAGGTCTCCTCCCCCATTGCCCTCAGCGCCCTGCAAAACTCCTACCCATCTTCCGCCGGCTCATTCCGACCTGAACTCGTTGAACCCGTTTTCAAGCCCATGCTAGAGTTCCTTCGTCAAACCGGGTCCTATCTCATGGTCAACTGCTACCCCTACTTCGCTTACGAGTCAAACTCTGACGTCATCCCCTTGGACTATGCCCTCTTCCGTGAAAACCCTGGAGTCGTCGACGCTGGCAACGGCCTCCGTTACTTCAACCTCTTCGACGCCCAGATCGACGCCGTTTTCGCCGCCATGTCGGCGTTGAAGTACGACGACATCAACATGGTTGTGTCGGAAACGGGGTGGCCGTCCAAAGGCGACTCGGTTGAAGTAGGCGCGAGTGTGGAGAACGCAGCCGCCTACAACGGCAACCTCGTCCGTCGGATATTGACCGGCGGGGGGACCCCCTTGAGGCCGAAAGCAGATCTGACCGTATATCTCTTCGCTCTATTCAACGAGGACAAGAAATTCGGTCCCACATCAGAGAGAAACTACGGGCTCTTCTTCCCCAACGAGCGGAAGGTGTACGACATACCGTTTACCGTCGAAGGACTAAAGAATTACCACGACCGCCGGTCGCCGGTATCCGGAAACCAGCATGTGACTGCTCCGGTCAACGGGGGAGGGGACATGTCGAAGAGCTTGACCGGGAACACGTGGTGCGTGGCGAATGGGGAGACCGGGAAGGAGAAGCTGCAGGCGGGACTAGACTACGCTTGCGGTGAGGGCGGGGCGGACTGCCATCAGATCCAGCCGGGGTCCGCGTGTTATGATCCTAACACCCTGGAGGCCCACGCCTCATACGCTTTCAACAGTTACTACCAAAAGAAGGCACGTGGAGTCGGCACGTGCTATTTTGGCGGGGCGGCCTACGTTGTCTCTCAAACACCCAAGTTTGGGAAATGTGAGCTGCCGACTGGGTACGGAAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyco_hydro_17 X8

Protein Analysis

563

Amino Acids

61.16

Weight (kDa)

8.35

Isoelectric Point (pI)

39.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015945)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G05790
fragaria_vesca FvH4_6g42190
malus_domestica MD09G1113900.v1.1 MD17G1104000.v1.1
prunus_persica Prupe.3G210700_v2.0.a1
pyrus_communis pycom09g03790
rosa_chinensis RchiOBHm_Chr2g0158111
rosa_laevigata RLG00000021060
rosa_multiflora Rmu_sc0005982.1_g000010
rosa_roxburghii Rroxscaffold_2G00091660
rosa_samantha Rh2AG532100 Rh2BG546200 Rh2CG516000 Rh2DG554700
rosa_wichuraiana Rw2G043990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 482
AatII GACGTC 1 cut(s) 897
Acc36I ACCTGC 2 cut(s) 378, 504
AccBSI CCGCTC 2 cut(s) 421, 1273
AccI GTMKAC 2 cut(s) 492, 942
AccII CGCG 2 cut(s) 1094, 1520
AccIII TCCGGA 1 cut(s) 1343
AclI AACGTT 1 cut(s) 564
AclWI GGATC 5 cut(s) 79, 465, 478, 1498, 1523
AcoI YGGCCR 2 cut(s) 447, 1061
AcsI RAATTY 1 cut(s) 1223
AcuI CTGAAG 1 cut(s) 422
AcvI CACGTG 4 cut(s) 67, 1413, 1592, 1605
AcyI GRCGYC 3 cut(s) 894, 981, 993
AdeI CACNNNGTG 1 cut(s) 1416
AfaI GTAC 5 cut(s) 188, 383, 1025, 1283, 1679
AflIII ACRYGT 3 cut(s) 64, 1386, 1410
AgsI TTSAA 8 cut(s) 697, 797, 808, 970, 1021, 1085, 1210, 1567
AhdI GACNNNNNGTC 1 cut(s) 1330
AjnI CCWGG 2 cut(s) 931, 1539
Alw21I GWGCWC 2 cut(s) 456, 510
Alw26I GTCTC 4 cut(s) 534, 724, 1427, 1639
AlwI GGATC 5 cut(s) 79, 465, 478, 1498, 1523
AlwNI CAGNNNCTG 1 cut(s) 400
Ama87I CYCGRG 1 cut(s) 701
Aor13HI TCCGGA 1 cut(s) 1343
AoxI GGCC 9 cut(s) 12, 49, 330, 447, 955, 1061, 1169, 1545, 1623
ApeKI GCWGC 4 cut(s) 394, 1109, 1450, 1666
ApoI RAATTY 1 cut(s) 1223
ArsI GACNNNNNNTTYG 4 cut(s) 983, 1015, 1208, 1240
AspLEI GCGC 2 cut(s) 743, 1094
AspS9I GGNCC 9 cut(s) 13, 49, 71, 553, 840, 1158, 1229, 1515, 1546
AsuC2I CCSGG 5 cut(s) 446, 838, 1405, 1438, 1512
AsuHPI GGTGA 3 cut(s) 19, 478, 1490
AvaI CYCGRG 1 cut(s) 701
AvaII GGWCC 6 cut(s) 71, 553, 840, 1158, 1229, 1515
BaeGI GKGCMC 1 cut(s) 463
BamHI GGATCC 1 cut(s) 470
BanII GRGCYC 2 cut(s) 510, 1257
BbrPI CACGTG 4 cut(s) 67, 1413, 1592, 1605
BbsI GAAGAC 2 cut(s) 424, 613
Bbv12I GWGCWC 2 cut(s) 456, 510
BbvCI CCTCAGC 1 cut(s) 737
BbvI GCAGC 4 cut(s) 406, 1121, 1437, 1653
BccI CCATC 5 cut(s) 32, 86, 719, 769, 1506
BceAI ACGGC 9 cut(s) 36, 169, 272, 358, 434, 970, 980, 1048, 1138
BciT130I CCWGG 2 cut(s) 933, 1541
BciVI GTATCC 1 cut(s) 1351
BcnI CCSGG 5 cut(s) 446, 838, 1405, 1438, 1512
BcoDI GTCTC 4 cut(s) 534, 724, 1427, 1639
BfaI CTAG 4 cut(s) 320, 464, 818, 1463
BfmI CTRYAG 1 cut(s) 1451
BfoI RGCGCY 1 cut(s) 744
BfuAI ACCTGC 2 cut(s) 378, 504
BfuI GTATCC 1 cut(s) 1351
BglI GCCNNNNNGGC 1 cut(s) 1013
BglII AGATCT 1 cut(s) 1180
BisI GCNGC 9 cut(s) 330, 395, 522, 1005, 1110, 1113, 1451, 1623, 1667
BlsI GCNGC 9 cut(s) 331, 396, 523, 1006, 1111, 1114, 1452, 1624, 1668
Bme1390I CCNGG 7 cut(s) 446, 838, 933, 1405, 1438, 1512, 1541
Bme18I GGWCC 6 cut(s) 71, 553, 840, 1158, 1229, 1515
BmeRI GACNNNNNGTC 1 cut(s) 1330
BmeT110I CYCGRG 1 cut(s) 701
BmgT120I GGNCC 9 cut(s) 13, 49, 71, 553, 840, 1158, 1229, 1515, 1546
BmiI GGNNCC 9 cut(s) 72, 73, 472, 554, 841, 1159, 1160, 1231, 1516
BmrFI CCNGG 7 cut(s) 446, 838, 933, 1405, 1438, 1512, 1541
BmrI ACTGGG 2 cut(s) 559, 1683
BmsI GCATC 1 cut(s) 316
BmuI ACTGGG 2 cut(s) 559, 1683
BpiI GAAGAC 2 cut(s) 424, 613
BplI GAGNNNNNCTC 4 cut(s) 497, 529, 872, 904
BpmI CTGGAG 2 cut(s) 954, 1562
Bpu10I CCTNAGC 1 cut(s) 737
BpuEI CTTGAG 1 cut(s) 1186
BpuMI CCSGG 5 cut(s) 446, 838, 1405, 1438, 1512
BsaAI YACGTR 4 cut(s) 67, 1413, 1592, 1605
BsaHI GRCGYC 3 cut(s) 894, 981, 993
BsaI GGTCTC 2 cut(s) 724, 1427
BsaJI CCNNGG 5 cut(s) 333, 903, 931, 1511, 1539
BsaWI WCCGGW 2 cut(s) 1343, 1366
BsaXI ACNNNNNCTCC 2 cut(s) 236, 266
Bse118I RCCGGY 4 cut(s) 770, 1148, 1329, 1336
Bse1I ACTGG 2 cut(s) 554, 1678
Bse3DI GCAATG 2 cut(s) 619, 729
BseAI TCCGGA 1 cut(s) 1343
BseBI CCWGG 2 cut(s) 933, 1541
BseDI CCNNGG 5 cut(s) 333, 903, 931, 1511, 1539
BseGI GGATG 2 cut(s) 672, 897
BseMI GCAATG 2 cut(s) 619, 729
BseMII CTCAG 2 cut(s) 545, 751
BseNI ACTGG 2 cut(s) 554, 1678
BseRI GAGGAG 7 cut(s) 45, 132, 150, 287, 500, 505, 712
BseSI GKGCMC 1 cut(s) 463
BseX3I CGGCCG 1 cut(s) 447
BseXI GCAGC 4 cut(s) 406, 1121, 1437, 1653
BsgI GTGCAG 1 cut(s) 413
Bsh1236I CGCG 2 cut(s) 1094, 1520
Bsh1285I CGRYCG 4 cut(s) 339, 450, 1327, 1334
BshFI GGCC 9 cut(s) 14, 51, 332, 449, 957, 1063, 1171, 1547, 1625
BsiEI CGRYCG 4 cut(s) 339, 450, 1327, 1334
BsiHKAI GWGCWC 2 cut(s) 456, 510
BsiHKCI CYCGRG 1 cut(s) 701
BslFI GGGAC 5 cut(s) 57, 1171, 1215, 1397, 1473
BsmAI GTCTC 4 cut(s) 534, 724, 1427, 1639
BsmFI GGGAC 5 cut(s) 57, 1171, 1215, 1397, 1473
BsnI GGCC 9 cut(s) 14, 51, 332, 449, 957, 1063, 1171, 1547, 1625
Bso31I GGTCTC 2 cut(s) 724, 1427
BsoBI CYCGRG 1 cut(s) 701
Bsp1286I GDGCHC 4 cut(s) 456, 463, 510, 1257
Bsp13I TCCGGA 1 cut(s) 1343
Bsp143I GATC 7 cut(s) 84, 470, 591, 987, 1180, 1503, 1528
BspANI GGCC 9 cut(s) 14, 51, 332, 449, 957, 1063, 1171, 1547, 1625
BspCNI CTCAG 2 cut(s) 544, 750
BspEI TCCGGA 1 cut(s) 1343
BspFNI CGCG 2 cut(s) 1094, 1520
BspLI GGNNCC 9 cut(s) 72, 73, 472, 554, 841, 1159, 1160, 1231, 1516
BspMAI CTGCAG 1 cut(s) 1455
BspMI ACCTGC 2 cut(s) 378, 504
BspPI GGATC 5 cut(s) 79, 465, 478, 1498, 1523
BspQI GCTCTTC 2 cut(s) 1262, 1388
BspTNI GGTCTC 2 cut(s) 724, 1427
BsrBI CCGCTC 2 cut(s) 421, 1273
BsrDI GCAATG 2 cut(s) 619, 729
BsrFI RCCGGY 4 cut(s) 770, 1148, 1329, 1336
BsrI ACTGG 2 cut(s) 554, 1678
BssAI RCCGGY 4 cut(s) 770, 1148, 1329, 1336
BssECI CCNNGG 5 cut(s) 333, 903, 931, 1511, 1539
BssMI GATC 7 cut(s) 84, 470, 591, 987, 1180, 1503, 1528
BssNI GRCGYC 3 cut(s) 894, 981, 993
BssT1I CCWWGG 1 cut(s) 903
Bst2UI CCWGG 2 cut(s) 933, 1541
Bst4CI ACNGT 6 cut(s) 167, 490, 1189, 1293, 1300, 1571
Bst6I CTCTTC 6 cut(s) 206, 923, 980, 1202, 1262, 1388
BstACI GRCGYC 3 cut(s) 894, 981, 993
BstBAI YACGTR 4 cut(s) 67, 1413, 1592, 1605
BstC8I GCNNGC 4 cut(s) 772, 949, 1455, 1474
BstDEI CTNAG 2 cut(s) 531, 737
BstEII GGTNACC 1 cut(s) 484
BstF5I GGATG 2 cut(s) 672, 897
BstFNI CGCG 2 cut(s) 1094, 1520
BstH2I RGCGCY 1 cut(s) 744
BstHHI GCGC 2 cut(s) 743, 1094
BstKTI GATC 7 cut(s) 87, 473, 594, 990, 1183, 1506, 1531
BstMAI GTCTC 4 cut(s) 534, 724, 1427, 1639
BstMBI GATC 7 cut(s) 84, 470, 591, 987, 1180, 1503, 1528
BstMCI CGRYCG 4 cut(s) 339, 450, 1327, 1334
BstMWI GCNNNNNNNGC 9 cut(s) 273, 329, 505, 740, 1001, 1013, 1482, 1559, 1614
BstNI CCWGG 2 cut(s) 933, 1541
BstNSI RCATGY 2 cut(s) 1358, 1390
BstPI GGTNACC 1 cut(s) 484
BstSCI CCNGG 7 cut(s) 444, 836, 931, 1403, 1436, 1510, 1539
BstSFI CTRYAG 1 cut(s) 1451
BstSLI GKGCMC 1 cut(s) 463
BstUI CGCG 2 cut(s) 1094, 1520
BstV1I GCAGC 4 cut(s) 406, 1121, 1437, 1653
BstV2I GAAGAC 2 cut(s) 424, 613
BstX2I RGATCY 3 cut(s) 470, 1180, 1503
BstYI RGATCY 3 cut(s) 470, 1180, 1503
BstZI CGGCCG 1 cut(s) 447
BsuI GTATCC 1 cut(s) 1351
BsuRI GGCC 9 cut(s) 14, 51, 332, 449, 957, 1063, 1171, 1547, 1625
BtsCI GGATG 2 cut(s) 672, 897
BtsI GCAGTG 1 cut(s) 244
BtsIMutI CAGTG 2 cut(s) 163, 244
BveI ACCTGC 2 cut(s) 378, 504
Cac8I GCNNGC 4 cut(s) 772, 949, 1455, 1474
CaiI CAGNNNCTG 1 cut(s) 400
CfoI GCGC 2 cut(s) 743, 1094
Cfr10I RCCGGY 4 cut(s) 770, 1148, 1329, 1336
Cfr13I GGNCC 9 cut(s) 13, 49, 71, 553, 840, 1158, 1229, 1515, 1546
CseI GACGC 4 cut(s) 46, 953, 989, 1001
Csp6I GTAC 5 cut(s) 187, 382, 1024, 1282, 1678
CviAII CATG 8 cut(s) 268, 278, 814, 850, 1009, 1039, 1355, 1387
CviQI GTAC 5 cut(s) 187, 382, 1024, 1282, 1678
DdeI CTNAG 2 cut(s) 531, 737
DpnI GATC 7 cut(s) 86, 472, 593, 989, 1182, 1505, 1530
DpnII GATC 7 cut(s) 84, 470, 591, 987, 1180, 1503, 1528
DraIII CACNNNGTG 1 cut(s) 1416
DrdI GACNNNNNNGTC 1 cut(s) 482
DriI GACNNNNNGTC 1 cut(s) 1330
DseDI GACNNNNNNGTC 1 cut(s) 482
EaeI YGGCCR 2 cut(s) 447, 1061
EagI CGGCCG 1 cut(s) 447
Eam1104I CTCTTC 6 cut(s) 206, 923, 980, 1202, 1262, 1388
Eam1105I GACNNNNNGTC 1 cut(s) 1330
EarI CTCTTC 6 cut(s) 206, 923, 980, 1202, 1262, 1388
EciI GGCGGA 3 cut(s) 508, 757, 1505
Ecl136II GAGCTC 1 cut(s) 508
EclXI CGGCCG 1 cut(s) 447
Eco130I CCWWGG 1 cut(s) 903
Eco24I GRGCYC 2 cut(s) 510, 1257
Eco31I GGTCTC 2 cut(s) 724, 1427
Eco47I GGWCC 6 cut(s) 71, 553, 840, 1158, 1229, 1515
Eco52I CGGCCG 1 cut(s) 447
Eco53kI GAGCTC 1 cut(s) 508
Eco57I CTGAAG 1 cut(s) 422
Eco72I CACGTG 4 cut(s) 67, 1413, 1592, 1605
Eco88I CYCGRG 1 cut(s) 701
Eco91I GGTNACC 1 cut(s) 484
EcoICRI GAGCTC 1 cut(s) 508
EcoO109I RGGNCCY 3 cut(s) 71, 840, 1158
EcoO65I GGTNACC 1 cut(s) 484
EcoRII CCWGG 2 cut(s) 931, 1539
EcoT14I CCWWGG 1 cut(s) 903
EcoT38I GRGCYC 2 cut(s) 510, 1257
ErhI CCWWGG 1 cut(s) 903
FaeI CATG 8 cut(s) 271, 281, 817, 853, 1012, 1042, 1358, 1390
FaqI GGGAC 5 cut(s) 57, 1171, 1215, 1397, 1473
FatI CATG 8 cut(s) 267, 277, 813, 849, 1008, 1038, 1354, 1386
FauI CCCGC 6 cut(s) 82, 414, 1145, 1450, 1478, 1610
FblI GTMKAC 2 cut(s) 492, 942
Fnu4HI GCNGC 9 cut(s) 330, 395, 522, 1005, 1110, 1113, 1451, 1623, 1667
FokI GGATG 2 cut(s) 659, 884
FriOI GRGCYC 2 cut(s) 510, 1257
Fsp4HI GCNGC 9 cut(s) 330, 395, 522, 1005, 1110, 1113, 1451, 1623, 1667
FspBI CTAG 4 cut(s) 320, 464, 818, 1463
GlaI GCGC 2 cut(s) 742, 1093
GluI GCNGC 9 cut(s) 330, 395, 522, 1005, 1110, 1113, 1451, 1623, 1667
GsuI CTGGAG 2 cut(s) 954, 1562
HaeII RGCGCY 1 cut(s) 744
HaeIII GGCC 9 cut(s) 14, 51, 332, 449, 957, 1063, 1171, 1547, 1625
HgaI GACGC 4 cut(s) 46, 953, 989, 1001
HhaI GCGC 2 cut(s) 743, 1094
Hin1I GRCGYC 3 cut(s) 894, 981, 993
Hin1II CATG 8 cut(s) 271, 281, 817, 853, 1012, 1042, 1358, 1390
Hin6I GCGC 2 cut(s) 741, 1092
HinP1I GCGC 2 cut(s) 741, 1092
HincII GTYRAC 5 cut(s) 493, 628, 856, 943, 1372
HindII GTYRAC 5 cut(s) 493, 628, 856, 943, 1372
HinfI GANTC 6 cut(s) 437, 704, 881, 936, 1076, 1596
HphI GGTGA 3 cut(s) 19, 478, 1490
Hpy166II GTNNAC 9 cut(s) 346, 493, 628, 691, 856, 943, 1282, 1296, 1372
Hpy188III TCNNGA 2 cut(s) 82, 1344
Hpy8I GTNNAC 9 cut(s) 346, 493, 628, 691, 856, 943, 1282, 1296, 1372
HpyAV CCTTC 8 cut(s) 4, 145, 249, 836, 1270, 1298, 1435, 1579
HpyCH4III ACNGT 6 cut(s) 167, 490, 1189, 1293, 1300, 1571
HpyCH4IV ACGT 8 cut(s) 66, 92, 564, 894, 1412, 1591, 1604, 1629
HpyCH4V TGCA 3 cut(s) 394, 748, 1453
HpyF10VI GCNNNNNNNGC 9 cut(s) 273, 329, 505, 740, 1001, 1013, 1482, 1559, 1614
HpyF3I CTNAG 2 cut(s) 531, 737
HpySE526I ACGT 8 cut(s) 66, 92, 564, 894, 1412, 1591, 1604, 1629
Hsp92I GRCGYC 3 cut(s) 894, 981, 993
Hsp92II CATG 8 cut(s) 271, 281, 817, 853, 1012, 1042, 1358, 1390
HspAI GCGC 2 cut(s) 741, 1092
KflI GGGWCCC 2 cut(s) 71, 1158
Kpn2I TCCGGA 1 cut(s) 1343
KroI GCCGGC 1 cut(s) 770
KroNI GCCGGC 1 cut(s) 772
Kzo9I GATC 7 cut(s) 84, 470, 591, 987, 1180, 1503, 1528
LguI GCTCTTC 2 cut(s) 1262, 1388
LmnI GCTCC 5 cut(s) 300, 418, 459, 513, 1369
Lsp1109I GCAGC 4 cut(s) 406, 1121, 1437, 1653
LweI GCATC 1 cut(s) 316
MaeI CTAG 4 cut(s) 320, 464, 818, 1463
MaeII ACGT 8 cut(s) 66, 92, 564, 894, 1412, 1591, 1604, 1629
MaeIII GTNAC 6 cut(s) 167, 405, 484, 962, 1357, 1571
MalI GATC 7 cut(s) 86, 472, 593, 989, 1182, 1505, 1530
MbiI CCGCTC 2 cut(s) 421, 1273
MboI GATC 7 cut(s) 84, 470, 591, 987, 1180, 1503, 1528
MflI RGATCY 3 cut(s) 470, 1180, 1503
MhlI GDGCHC 4 cut(s) 456, 463, 510, 1257
MluCI AATT 3 cut(s) 192, 1223, 1315
MlyI GAGTC 6 cut(s) 431, 713, 890, 945, 1070, 1605
MmeI TCCRAC 6 cut(s) 319, 465, 498, 805, 1029, 1118
MroI TCCGGA 1 cut(s) 1343
MroNI GCCGGC 1 cut(s) 770
MslI CAYNNNNRTG 2 cut(s) 1037, 1043
MspR9I CCNGG 7 cut(s) 446, 838, 933, 1405, 1438, 1512, 1541
MvaI CCWGG 2 cut(s) 933, 1541
MvnI CGCG 2 cut(s) 1094, 1520
MwoI GCNNNNNNNGC 9 cut(s) 273, 329, 505, 740, 1001, 1013, 1482, 1559, 1614
NaeI GCCGGC 1 cut(s) 772
NciI CCSGG 5 cut(s) 446, 838, 1405, 1438, 1512
NdeII GATC 7 cut(s) 84, 470, 591, 987, 1180, 1503, 1528
NgoMIV GCCGGC 1 cut(s) 770
NlaIII CATG 8 cut(s) 271, 281, 817, 853, 1012, 1042, 1358, 1390
NlaIV GGNNCC 9 cut(s) 72, 73, 472, 554, 841, 1159, 1160, 1231, 1516
NmuCI GTSAC 4 cut(s) 167, 405, 484, 1357
NspI RCATGY 2 cut(s) 1358, 1390
PaeR7I CTCGAG 1 cut(s) 701
PciI ACATGT 1 cut(s) 1386
PciSI GCTCTTC 2 cut(s) 1262, 1388
PcsI WCGNNNNNNNCGW 6 cut(s) 49, 89, 798, 987, 1061, 1128
PdiI GCCGGC 1 cut(s) 772
PkrI GCNGC 9 cut(s) 331, 396, 523, 1006, 1111, 1114, 1452, 1624, 1668
PleI GAGTC 6 cut(s) 431, 712, 889, 944, 1070, 1604
PmaCI CACGTG 4 cut(s) 67, 1413, 1592, 1605
PmlI CACGTG 4 cut(s) 67, 1413, 1592, 1605
PpsI GAGTC 6 cut(s) 431, 712, 889, 944, 1070, 1604
Ppu21I YACGTR 4 cut(s) 67, 1413, 1592, 1605
PpuMI RGGWCCY 3 cut(s) 71, 840, 1158
PscI ACATGT 1 cut(s) 1386
Psp124BI GAGCTC 1 cut(s) 510
Psp1406I AACGTT 1 cut(s) 564
Psp5II RGGWCCY 3 cut(s) 71, 840, 1158
Psp6I CCWGG 2 cut(s) 931, 1539
PspCI CACGTG 4 cut(s) 67, 1413, 1592, 1605
PspEI GGTNACC 1 cut(s) 484
PspGI CCWGG 2 cut(s) 931, 1539
PspN4I GGNNCC 9 cut(s) 72, 73, 472, 554, 841, 1159, 1160, 1231, 1516
PspPI GGNCC 9 cut(s) 13, 49, 71, 553, 840, 1158, 1229, 1515, 1546
PspPPI RGGWCCY 3 cut(s) 71, 840, 1158
PspXI VCTCGAGB 1 cut(s) 701
PstI CTGCAG 1 cut(s) 1455
PstNI CAGNNNCTG 1 cut(s) 400
PsuI RGATCY 3 cut(s) 470, 1180, 1503
RsaI GTAC 5 cut(s) 188, 383, 1025, 1283, 1679
RsaNI GTAC 5 cut(s) 187, 382, 1024, 1282, 1678
RseI CAYNNNNRTG 2 cut(s) 1037, 1043
SacI GAGCTC 1 cut(s) 510
SalI GTCGAC 2 cut(s) 491, 941
SapI GCTCTTC 2 cut(s) 1262, 1388
SatI GCNGC 9 cut(s) 330, 395, 522, 1005, 1110, 1113, 1451, 1623, 1667
Sau3AI GATC 7 cut(s) 84, 470, 591, 987, 1180, 1503, 1528
Sau96I GGNCC 9 cut(s) 13, 49, 71, 553, 840, 1158, 1229, 1515, 1546
SchI GAGTC 6 cut(s) 431, 713, 890, 945, 1070, 1605
ScrFI CCNGG 7 cut(s) 446, 838, 933, 1405, 1438, 1512, 1541
SduI GDGCHC 4 cut(s) 456, 463, 510, 1257
SfaNI GCATC 1 cut(s) 316
SfcI CTRYAG 1 cut(s) 1451
Sfr274I CTCGAG 1 cut(s) 701
SgrDI CGTCGACG 1 cut(s) 941
SinI GGWCC 6 cut(s) 71, 553, 840, 1158, 1229, 1515
SlaI CTCGAG 1 cut(s) 701
SmiMI CAYNNNNRTG 2 cut(s) 1037, 1043
SmlI CTYRAG 2 cut(s) 701, 1165
SmoI CTYRAG 2 cut(s) 701, 1165
Sse9I AATT 3 cut(s) 192, 1223, 1315
SspMI CTAG 4 cut(s) 320, 464, 818, 1463
SstI GAGCTC 1 cut(s) 510
StyD4I CCNGG 7 cut(s) 444, 836, 931, 1403, 1436, 1510, 1539
StyI CCWWGG 1 cut(s) 903
TaaI ACNGT 6 cut(s) 167, 490, 1189, 1293, 1300, 1571
TaiI ACGT 8 cut(s) 69, 95, 567, 897, 1415, 1594, 1607, 1632
TaqII GACCGA 2 cut(s) 325, 1217
TasI AATT 3 cut(s) 192, 1223, 1315
TauI GCSGC 5 cut(s) 332, 524, 1007, 1115, 1625
TscAI CASTG 2 cut(s) 170, 251
TseFI GTSAC 4 cut(s) 167, 405, 484, 1357
TseI GCWGC 4 cut(s) 394, 1109, 1450, 1666
Tsp45I GTSAC 4 cut(s) 167, 405, 484, 1357
TspDTI ATGAA 2 cut(s) 303, 680
TspGWI ACGGA 4 cut(s) 446, 911, 950, 1124
TspRI CASTG 2 cut(s) 170, 251
VpaK11BI GGWCC 6 cut(s) 71, 553, 840, 1158, 1229, 1515
XapI RAATTY 1 cut(s) 1223
XceI RCATGY 2 cut(s) 1358, 1390
XcmI CCANNNNNNNNNTGG 1 cut(s) 23
XhoI CTCGAG 1 cut(s) 701
XmiI GTMKAC 2 cut(s) 492, 942
XspI CTAG 4 cut(s) 320, 464, 818, 1463
ZraI GACGTC 1 cut(s) 895
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.