Rroxscaffold_2G00091660

Belongs to the glycosyl hydrolase 17 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0015945
Physical Location & Seq
Forward (+)
13188009 .. 13190059
2051 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00091660.1

Sequence Viewer

Length: 1272 bp
ATGGCTCACCCCCACGTCACACTCCTGTCCTGCTCGCTTCTGCTCCTCCTCTCCGTCTTCGCTTCACATTCAGATGCGGGTTCAGTCGGAGTGAACTACGGCAGAATCGCCGACAACCTTCCGTCGGCCTACAAGGTTGCCGCCCTTATCAAGTCTCAGGGCTTGGAGCGGGTCAAGGTCTTTGACTCCGACCCGGCAGTCCTCCGGGCCTTATCCGGATCCGGAATCAAGCGCAACGTCGTCGCTTACCATCCCAACACCCAAATCGAAGCCATTGCCGTCGGGAACGAGGTCTTCGTCGACACCCACAACACCACCAAGTACCTCATCGCCGCCATGAAGAACATCCACACTGCCCTCGTCAAGTTCAACCTCGCCTCCGACATCAAGGTCTCCTCCCCCATTGCCCTCAGCGCCCTCCAGAACTCCTACCCGTCCTCCGCCGGGTCATTCCGACCCGAGCTCGTCGAACCCGTCTTCAAGCCCATGCTCGACTTCCTCCGTCAAACCGGGTCCTACCTCATGGTGAACGCTTACCCCTACTTCGCCTACGAGTCCAACGCTGACGTCATCTCCTTGGACTACGCTCTGTTCCGTCAGAACCCCGGTGTGGTCGACGCCGGCAGCAACCTCCGTTACTTCAGCCTCTTCGACGCCCAAATCGACGCCGTTTTCGCCGCCATGAGCGCCCTTAAATACGACGACATTGAGATGGTCGTTTCCGAAACCGGTTGGCCTTCCAAGGGAGACGAGAATGAGGTCGGAGCCAGCCTCGAAAACGCAGCTGCCTACAACGGAAACCTCAACGGCCCCACATCGGAGAGAAACTACGGCCTGTTCTTCCCCAACGAGAAGAAAGTGTACGACATCCCATTCACCGTGGAAGGCCTTAAGAACTACCACGACCACCAGTCCCCTGTTTCCGGCAACCAACACGAGACATCTCCGGTGACTTCGCCGGATACCGGGGGAGGTGACGTCTCCAAGACTCTGACCGGGAACACGTGGTGCGTGGCGAATGGTGAGGCGCGTAAAGAGAAGCTGCAGGCGGCTCTGGATTTCGCTTGCGGTGAGGGAGGGGCTGACTGCCATCAGATCCAGCCCGGTTCCACGTGTTACGATCCTAACACTCTCGAGGCCCACGCCTCGTTCGCGTTCAACAGCTACTACCAGAAAAAGGCGCGCGGAGCCGGCACGTGCTATTTTGGCGGGGCGGCCTACGTAGTCTCGCAGCCACCTAAGTATGGGAAATGTGAGCTGCCCATGAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyco_hydro_17 X8

Protein Analysis

423

Amino Acids

45.6

Weight (kDa)

5.56

Isoelectric Point (pI)

31.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_17 PF00332 29 - 77 4.1e-08 Glycosyl hydrolases family 17
Glyco_hydro_17 PF00332 77 - 268 1.2e-47 Glycosyl hydrolases family 17
X8 PF07983 335 - 406 3.5e-23 X8 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015945)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G05790
fragaria_vesca FvH4_6g42190
malus_domestica MD09G1113900.v1.1 MD17G1104000.v1.1
prunus_persica Prupe.3G210700_v2.0.a1
pyrus_communis pycom09g03790
rosa_chinensis RchiOBHm_Chr2g0158111
rosa_laevigata RLG00000021060
rosa_multiflora Rmu_sc0005982.1_g000010
rosa_roxburghii Rroxscaffold_2G00091660
rosa_samantha Rh2AG532100 Rh2BG546200 Rh2CG516000 Rh2DG554700
rosa_wichuraiana Rw2G043990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 197, 389
AatII GACGTC 2 cut(s) 570, 981
AccBSI CCGCTC 1 cut(s) 169
AccI GTMKAC 2 cut(s) 300, 615
AccII CGCG 4 cut(s) 1030, 1154, 1183, 1185
AccIII TCCGGA 2 cut(s) 215, 221
AclWI GGATC 4 cut(s) 213, 226, 1090, 1115
AcuI CTGAAG 1 cut(s) 625
AcvI CACGTG 3 cut(s) 1005, 1113, 1197
AcyI GRCGYC 5 cut(s) 567, 618, 654, 666, 978
AdeI CACNNNGTG 1 cut(s) 1008
AfaI GTAC 2 cut(s) 323, 863
AfiI CCNNNNNNNGG 9 cut(s) 124, 444, 610, 743, 817, 923, 965, 1177, 1244
AflII CTTAAG 1 cut(s) 890
AflIII ACRYGT 2 cut(s) 1002, 1112
AgeI ACCGGT 1 cut(s) 728
AgsI TTSAA 3 cut(s) 370, 481, 1159
AhdI GACNNNNNGTC 1 cut(s) 910
AjiI CACGTC 1 cut(s) 16
AluBI AGCT 6 cut(s) 463, 785, 1042, 1164, 1258, 1269
AluI AGCT 6 cut(s) 463, 785, 1042, 1164, 1258, 1269
Alw21I GWGCWC 1 cut(s) 465
Alw26I GTCTC 6 cut(s) 159, 397, 741, 932, 985, 1231
AlwI GGATC 4 cut(s) 213, 226, 1090, 1115
Ama87I CYCGRG 2 cut(s) 458, 1133
Aor13HI TCCGGA 2 cut(s) 215, 221
AoxI GGCC 8 cut(s) 126, 207, 734, 808, 832, 886, 1137, 1215
ApeKI GCWGC 6 cut(s) 624, 782, 785, 1042, 1231, 1258
ArsI GACNNNNNNTTYG 2 cut(s) 656, 688
AsiGI ACCGGT 1 cut(s) 728
AspLEI GCGC 6 cut(s) 234, 416, 689, 1030, 1183, 1185
AspS9I GGNCC 4 cut(s) 207, 513, 809, 1138
AsuC2I CCSGG 8 cut(s) 194, 206, 445, 511, 606, 967, 997, 1104
AsuHPI GGTGA 6 cut(s) 538, 868, 961, 986, 1034, 1082
AvaI CYCGRG 2 cut(s) 458, 1133
AvaII GGWCC 1 cut(s) 513
BamHI GGATCC 1 cut(s) 218
BanII GRGCYC 1 cut(s) 465
BarI GAAGNNNNNNTAC 2 cut(s) 845, 877
BauI CACGAG 1 cut(s) 935
BbrPI CACGTG 3 cut(s) 1005, 1113, 1197
BbsI GAAGAC 3 cut(s) 49, 286, 469
Bbv12I GWGCWC 1 cut(s) 465
BbvCI CCTCAGC 1 cut(s) 410
BbvI GCAGC 6 cut(s) 636, 772, 794, 1029, 1243, 1245
BccI CCATC 3 cut(s) 258, 706, 1098
BceAI ACGGC 5 cut(s) 115, 263, 653, 823, 847
BcgI CGANNNNNNTGC 4 cut(s) 223, 257, 257, 291
BciVI GTATCC 1 cut(s) 955
BcnI CCSGG 8 cut(s) 194, 206, 445, 511, 606, 967, 997, 1104
BcoDI GTCTC 6 cut(s) 159, 397, 741, 932, 985, 1231
BfmI CTRYAG 1 cut(s) 1043
BfoI RGCGCY 2 cut(s) 417, 690
BfrI CTTAAG 1 cut(s) 890
BfuI GTATCC 1 cut(s) 955
Bme1390I CCNGG 8 cut(s) 194, 206, 445, 511, 606, 967, 997, 1104
Bme18I GGWCC 1 cut(s) 513
BmeRI GACNNNNNGTC 1 cut(s) 910
BmeT110I CYCGRG 2 cut(s) 458, 1133
BmgBI CACGTC 1 cut(s) 16
BmgT120I GGNCC 4 cut(s) 207, 513, 809, 1138
BmiI GGNNCC 6 cut(s) 220, 514, 766, 811, 1108, 1189
BmrFI CCNGG 8 cut(s) 194, 206, 445, 511, 606, 967, 997, 1104
BmsI GCATC 1 cut(s) 64
BpiI GAAGAC 3 cut(s) 49, 286, 469
BplI GAGNNNNNCTC 2 cut(s) 756, 788
BpmI CTGGAG 1 cut(s) 404
Bpu10I CCTNAGC 1 cut(s) 410
BpuMI CCSGG 8 cut(s) 194, 206, 445, 511, 606, 967, 997, 1104
BsaAI YACGTR 4 cut(s) 1005, 1113, 1197, 1222
BsaHI GRCGYC 5 cut(s) 567, 618, 654, 666, 978
BsaI GGTCTC 1 cut(s) 397
BsaJI CCNNGG 5 cut(s) 576, 604, 741, 879, 966
BsaWI WCCGGW 4 cut(s) 215, 221, 728, 946
BsaXI ACNNNNNCTCC 8 cut(s) 362, 392, 422, 452, 557, 587, 963, 993
Bsc4I CCNNNNNNNGG 9 cut(s) 124, 444, 610, 743, 817, 923, 965, 1177, 1244
Bse118I RCCGGY 3 cut(s) 620, 728, 1190
Bse1I ACTGG 1 cut(s) 910
Bse3DI GCAATG 2 cut(s) 273, 402
BseAI TCCGGA 2 cut(s) 215, 221
BseDI CCNNGG 5 cut(s) 576, 604, 741, 879, 966
BseGI GGATG 3 cut(s) 250, 345, 867
BseLI CCNNNNNNNGG 9 cut(s) 124, 444, 610, 743, 817, 923, 965, 1177, 1244
BseMI GCAATG 2 cut(s) 273, 402
BseMII CTCAG 2 cut(s) 170, 424
BseNI ACTGG 1 cut(s) 910
BsePI GCGCGC 1 cut(s) 1181
BseRI GAGGAG 3 cut(s) 35, 38, 385
BseXI GCAGC 6 cut(s) 636, 772, 794, 1029, 1243, 1245
Bsh1236I CGCG 4 cut(s) 1030, 1154, 1183, 1185
BshFI GGCC 8 cut(s) 128, 209, 736, 810, 834, 888, 1139, 1217
BshTI ACCGGT 1 cut(s) 728
BsiHKAI GWGCWC 1 cut(s) 465
BsiHKCI CYCGRG 2 cut(s) 458, 1133
BslFI GGGAC 1 cut(s) 898
BslI CCNNNNNNNGG 9 cut(s) 124, 444, 610, 743, 817, 923, 965, 1177, 1244
BsmAI GTCTC 6 cut(s) 159, 397, 741, 932, 985, 1231
BsmBI CGTCTC 2 cut(s) 741, 985
BsmFI GGGAC 1 cut(s) 898
BsnI GGCC 8 cut(s) 128, 209, 736, 810, 834, 888, 1139, 1217
Bso31I GGTCTC 1 cut(s) 397
BsoBI CYCGRG 2 cut(s) 458, 1133
Bsp1286I GDGCHC 1 cut(s) 465
Bsp13I TCCGGA 2 cut(s) 215, 221
Bsp143I GATC 3 cut(s) 218, 1095, 1120
BspANI GGCC 8 cut(s) 128, 209, 736, 810, 834, 888, 1139, 1217
BspCNI CTCAG 2 cut(s) 169, 423
BspEI TCCGGA 2 cut(s) 215, 221
BspFNI CGCG 4 cut(s) 1030, 1154, 1183, 1185
BspLI GGNNCC 6 cut(s) 220, 514, 766, 811, 1108, 1189
BspMAI CTGCAG 1 cut(s) 1047
BspPI GGATC 4 cut(s) 213, 226, 1090, 1115
BspTI CTTAAG 1 cut(s) 890
BspTNI GGTCTC 1 cut(s) 397
BsrBI CCGCTC 1 cut(s) 169
BsrDI GCAATG 2 cut(s) 273, 402
BsrFI RCCGGY 3 cut(s) 620, 728, 1190
BsrI ACTGG 1 cut(s) 910
BssAI RCCGGY 3 cut(s) 620, 728, 1190
BssECI CCNNGG 5 cut(s) 576, 604, 741, 879, 966
BssHII GCGCGC 1 cut(s) 1181
BssMI GATC 3 cut(s) 218, 1095, 1120
BssNI GRCGYC 5 cut(s) 567, 618, 654, 666, 978
BssSI CACGAG 1 cut(s) 935
BssT1I CCWWGG 2 cut(s) 576, 741
Bst2BI CACGAG 1 cut(s) 935
Bst4CI ACNGT 1 cut(s) 880
Bst6I CTCTTC 1 cut(s) 653
BstACI GRCGYC 5 cut(s) 567, 618, 654, 666, 978
BstAFI CTTAAG 1 cut(s) 890
BstBAI YACGTR 4 cut(s) 1005, 1113, 1197, 1222
BstC8I GCNNGC 7 cut(s) 35, 622, 769, 1047, 1066, 1183, 1192
BstDEI CTNAG 3 cut(s) 156, 410, 1239
BstDSI CCRYGG 1 cut(s) 879
BstF5I GGATG 3 cut(s) 250, 345, 867
BstFNI CGCG 4 cut(s) 1030, 1154, 1183, 1185
BstH2I RGCGCY 2 cut(s) 417, 690
BstHHI GCGC 6 cut(s) 234, 416, 689, 1030, 1183, 1185
BstKTI GATC 3 cut(s) 221, 1098, 1123
BstMAI GTCTC 6 cut(s) 159, 397, 741, 932, 985, 1231
BstMBI GATC 3 cut(s) 218, 1095, 1120
BstMWI GCNNNNNNNGC 7 cut(s) 413, 674, 686, 1151, 1187, 1191, 1206
BstSCI CCNGG 8 cut(s) 192, 204, 443, 509, 604, 965, 995, 1102
BstSFI CTRYAG 1 cut(s) 1043
BstSNI TACGTA 1 cut(s) 1222
BstUI CGCG 4 cut(s) 1030, 1154, 1183, 1185
BstV1I GCAGC 6 cut(s) 636, 772, 794, 1029, 1243, 1245
BstV2I GAAGAC 3 cut(s) 49, 286, 469
BstX2I RGATCY 2 cut(s) 218, 1095
BstYI RGATCY 2 cut(s) 218, 1095
BsuI GTATCC 1 cut(s) 955
BsuRI GGCC 8 cut(s) 128, 209, 736, 810, 834, 888, 1139, 1217
BtgI CCRYGG 1 cut(s) 879
BtgZI GCGATG 1 cut(s) 313
BtrI CACGTC 1 cut(s) 16
BtsCI GGATG 3 cut(s) 250, 345, 867
BtsI GCAGTG 1 cut(s) 351
BtsIMutI CAGTG 1 cut(s) 351
Cac8I GCNNGC 7 cut(s) 35, 622, 769, 1047, 1066, 1183, 1192
CfoI GCGC 6 cut(s) 234, 416, 689, 1030, 1183, 1185
Cfr10I RCCGGY 3 cut(s) 620, 728, 1190
Cfr13I GGNCC 4 cut(s) 207, 513, 809, 1138
CseI GACGC 3 cut(s) 626, 662, 674
Csp6I GTAC 2 cut(s) 322, 862
CspAI ACCGGT 1 cut(s) 728
CviAII CATG 5 cut(s) 337, 487, 523, 682, 1264
CviQI GTAC 2 cut(s) 322, 862
DdeI CTNAG 3 cut(s) 156, 410, 1239
DpnI GATC 3 cut(s) 220, 1097, 1122
DpnII GATC 3 cut(s) 218, 1095, 1120
DraIII CACNNNGTG 1 cut(s) 1008
DrdI GACNNNNNNGTC 2 cut(s) 197, 389
DriI GACNNNNNGTC 1 cut(s) 910
DseDI GACNNNNNNGTC 2 cut(s) 197, 389
Eam1104I CTCTTC 1 cut(s) 653
Eam1105I GACNNNNNGTC 1 cut(s) 910
EarI CTCTTC 1 cut(s) 653
EciI GGCGGA 1 cut(s) 430
Ecl136II GAGCTC 1 cut(s) 463
Eco105I TACGTA 1 cut(s) 1222
Eco130I CCWWGG 2 cut(s) 576, 741
Eco147I AGGCCT 1 cut(s) 888
Eco24I GRGCYC 1 cut(s) 465
Eco31I GGTCTC 1 cut(s) 397
Eco47I GGWCC 1 cut(s) 513
Eco53kI GAGCTC 1 cut(s) 463
Eco57I CTGAAG 1 cut(s) 625
Eco72I CACGTG 3 cut(s) 1005, 1113, 1197
Eco88I CYCGRG 2 cut(s) 458, 1133
EcoICRI GAGCTC 1 cut(s) 463
EcoO109I RGGNCCY 1 cut(s) 513
EcoT14I CCWWGG 2 cut(s) 576, 741
EcoT38I GRGCYC 1 cut(s) 465
ErhI CCWWGG 2 cut(s) 576, 741
Esp3I CGTCTC 2 cut(s) 741, 985
FaeI CATG 5 cut(s) 340, 490, 526, 685, 1267
FaiI YATR 6 cut(s) 338, 488, 524, 683, 1245, 1265
FaqI GGGAC 1 cut(s) 898
FatI CATG 5 cut(s) 336, 486, 522, 681, 1263
FauI CCCGC 3 cut(s) 70, 162, 1202
FblI GTMKAC 2 cut(s) 300, 615
FokI GGATG 3 cut(s) 237, 332, 854
FriOI GRGCYC 1 cut(s) 465
GlaI GCGC 6 cut(s) 233, 415, 688, 1029, 1182, 1184
GsuI CTGGAG 1 cut(s) 404
HaeII RGCGCY 2 cut(s) 417, 690
HaeIII GGCC 8 cut(s) 128, 209, 736, 810, 834, 888, 1139, 1217
HgaI GACGC 3 cut(s) 626, 662, 674
HhaI GCGC 6 cut(s) 234, 416, 689, 1030, 1183, 1185
Hin1I GRCGYC 5 cut(s) 567, 618, 654, 666, 978
Hin1II CATG 5 cut(s) 340, 490, 526, 685, 1267
Hin6I GCGC 6 cut(s) 232, 414, 687, 1028, 1181, 1183
HinP1I GCGC 6 cut(s) 232, 414, 687, 1028, 1181, 1183
HincII GTYRAC 2 cut(s) 301, 616
HindII GTYRAC 2 cut(s) 301, 616
HinfI GANTC 5 cut(s) 105, 185, 225, 554, 988
HphI GGTGA 6 cut(s) 538, 868, 961, 986, 1034, 1082
Hpy166II GTNNAC 5 cut(s) 94, 301, 529, 616, 862
Hpy188III TCNNGA 6 cut(s) 216, 222, 283, 421, 1055, 1133
Hpy8I GTNNAC 5 cut(s) 94, 301, 529, 616, 862
HpyAV CCTTC 3 cut(s) 128, 747, 878
HpyCH4III ACNGT 1 cut(s) 880
HpyCH4IV ACGT 8 cut(s) 15, 237, 567, 978, 1004, 1112, 1196, 1221
HpyCH4V TGCA 1 cut(s) 1045
HpyF10VI GCNNNNNNNGC 7 cut(s) 413, 674, 686, 1151, 1187, 1191, 1206
HpyF3I CTNAG 3 cut(s) 156, 410, 1239
HpySE526I ACGT 8 cut(s) 15, 237, 567, 978, 1004, 1112, 1196, 1221
Hsp92I GRCGYC 5 cut(s) 567, 618, 654, 666, 978
Hsp92II CATG 5 cut(s) 340, 490, 526, 685, 1267
HspAI GCGC 6 cut(s) 232, 414, 687, 1028, 1181, 1183
Kpn2I TCCGGA 2 cut(s) 215, 221
KroI GCCGGC 2 cut(s) 620, 1190
KroNI GCCGGC 2 cut(s) 622, 1192
Kzo9I GATC 3 cut(s) 218, 1095, 1120
LmnI GCTCC 4 cut(s) 48, 166, 764, 1187
Lsp1109I GCAGC 6 cut(s) 636, 772, 794, 1029, 1243, 1245
LweI GCATC 1 cut(s) 64
MaeII ACGT 8 cut(s) 15, 237, 567, 978, 1004, 1112, 1196, 1221
MaeIII GTNAC 5 cut(s) 16, 635, 949, 974, 1115
MalI GATC 3 cut(s) 220, 1097, 1122
MbiI CCGCTC 1 cut(s) 169
MboI GATC 3 cut(s) 218, 1095, 1120
MboII GAAGA 7 cut(s) 49, 286, 352, 469, 640, 832, 865
MflI RGATCY 2 cut(s) 218, 1095
MhlI GDGCHC 1 cut(s) 465
MlyI GAGTC 3 cut(s) 179, 563, 982
MmeI TCCRAC 6 cut(s) 67, 213, 405, 478, 582, 742
MroI TCCGGA 2 cut(s) 215, 221
MroNI GCCGGC 2 cut(s) 620, 1190
MseI TTAA 2 cut(s) 693, 891
MslI CAYNNNNRTG 2 cut(s) 72, 710
MspA1I CMGCKG 1 cut(s) 785
MspCI CTTAAG 1 cut(s) 890
MspR9I CCNGG 8 cut(s) 194, 206, 445, 511, 606, 967, 997, 1104
MvnI CGCG 4 cut(s) 1030, 1154, 1183, 1185
MwoI GCNNNNNNNGC 7 cut(s) 413, 674, 686, 1151, 1187, 1191, 1206
NaeI GCCGGC 2 cut(s) 622, 1192
NciI CCSGG 8 cut(s) 194, 206, 445, 511, 606, 967, 997, 1104
NdeII GATC 3 cut(s) 218, 1095, 1120
NgoMIV GCCGGC 2 cut(s) 620, 1190
NlaIII CATG 5 cut(s) 340, 490, 526, 685, 1267
NlaIV GGNNCC 6 cut(s) 220, 514, 766, 811, 1108, 1189
NmuCI GTSAC 3 cut(s) 16, 949, 974
PaeR7I CTCGAG 1 cut(s) 1133
PauI GCGCGC 1 cut(s) 1181
PceI AGGCCT 1 cut(s) 888
PcsI WCGNNNNNNNCGW 3 cut(s) 294, 471, 660
PdiI GCCGGC 2 cut(s) 622, 1192
PfeI GAWTC 2 cut(s) 105, 225
PinAI ACCGGT 1 cut(s) 728
PleI GAGTC 3 cut(s) 179, 562, 982
PmaCI CACGTG 3 cut(s) 1005, 1113, 1197
PmlI CACGTG 3 cut(s) 1005, 1113, 1197
PpsI GAGTC 3 cut(s) 179, 562, 982
Ppu21I YACGTR 4 cut(s) 1005, 1113, 1197, 1222
PpuMI RGGWCCY 1 cut(s) 513
Psp124BI GAGCTC 1 cut(s) 465
Psp5II RGGWCCY 1 cut(s) 513
PspCI CACGTG 3 cut(s) 1005, 1113, 1197
PspN4I GGNNCC 6 cut(s) 220, 514, 766, 811, 1108, 1189
PspPI GGNCC 4 cut(s) 207, 513, 809, 1138
PspPPI RGGWCCY 1 cut(s) 513
PstI CTGCAG 1 cut(s) 1047
PsuI RGATCY 2 cut(s) 218, 1095
PteI GCGCGC 1 cut(s) 1181
PvuII CAGCTG 1 cut(s) 785
RsaI GTAC 2 cut(s) 323, 863
RsaNI GTAC 2 cut(s) 322, 862
RseI CAYNNNNRTG 2 cut(s) 72, 710
SacI GAGCTC 1 cut(s) 465
SalI GTCGAC 2 cut(s) 299, 614
SaqAI TTAA 2 cut(s) 693, 891
Sau3AI GATC 3 cut(s) 218, 1095, 1120
Sau96I GGNCC 4 cut(s) 207, 513, 809, 1138
SchI GAGTC 3 cut(s) 179, 563, 982
ScrFI CCNGG 8 cut(s) 194, 206, 445, 511, 606, 967, 997, 1104
SduI GDGCHC 1 cut(s) 465
SfaNI GCATC 1 cut(s) 64
SfcI CTRYAG 1 cut(s) 1043
Sfr274I CTCGAG 1 cut(s) 1133
SinI GGWCC 1 cut(s) 513
SlaI CTCGAG 1 cut(s) 1133
SmiMI CAYNNNNRTG 2 cut(s) 72, 710
SmlI CTYRAG 2 cut(s) 890, 1133
SmoI CTYRAG 2 cut(s) 890, 1133
SnaBI TACGTA 1 cut(s) 1222
SseBI AGGCCT 1 cut(s) 888
SstI GAGCTC 1 cut(s) 465
StuI AGGCCT 1 cut(s) 888
StyD4I CCNGG 8 cut(s) 192, 204, 443, 509, 604, 965, 995, 1102
StyI CCWWGG 2 cut(s) 576, 741
TaaI ACNGT 1 cut(s) 880
TaiI ACGT 8 cut(s) 18, 240, 570, 981, 1007, 1115, 1199, 1224
TaqI TCGA 9 cut(s) 267, 300, 468, 492, 615, 651, 663, 774, 1134
TauI GCSGC 5 cut(s) 143, 335, 680, 1052, 1217
TfiI GAWTC 2 cut(s) 105, 225
Tru1I TTAA 2 cut(s) 693, 891
Tru9I TTAA 2 cut(s) 693, 891
TscAI CASTG 1 cut(s) 358
TseFI GTSAC 3 cut(s) 16, 949, 974
TseI GCWGC 6 cut(s) 624, 782, 785, 1042, 1231, 1258
Tsp45I GTSAC 3 cut(s) 16, 949, 974
TspDTI ATGAA 1 cut(s) 353
TspGWI ACGGA 6 cut(s) 43, 111, 491, 584, 623, 810
TspRI CASTG 1 cut(s) 358
Vha464I CTTAAG 1 cut(s) 890
VpaK11BI GGWCC 1 cut(s) 513
XhoI CTCGAG 1 cut(s) 1133
XmiI GTMKAC 2 cut(s) 300, 615
ZraI GACGTC 2 cut(s) 568, 979
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.