LETM1-like protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g32010 FvH4_6g32010 |
| malus_domestica | MD09G1207000.v1.1 MD17G1187700.v1.1 |
| prunus_persica | Prupe.3G063100_v2.0.a1 Prupe.3G063100_v2.0.a1 Prupe.3G063100_v2.0.a1 Prupe.3G063100_v2.0.a1 Prupe.3G063100_v2.0.a1 Prupe.3G063100_v2.0.a1 Prupe.3G063100_v2.0.a1 Prupe.3G063100_v2.0.a1 |
| pyrus_communis | pycom09g12340 pycom17g19660 |
| rosa_chinensis | RchiOBHm_Chr2g0139611 |
| rosa_laevigata | RLG00000019822 |
| rosa_multiflora | Rmu_sc0032018.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00105350 |
| rosa_rugosa | Rorug02G0358700 |
| rosa_samantha | Rh2AG408600 Rh2BG419100 Rh2CG394600 Rh2DG428200 |
| rosa_wichuraiana | Rw2G033510 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 987, 1665 |
| AccB1I | GGYRCC | 1 cut(s) | 269 |
| AccBSI | CCGCTC | 1 cut(s) | 2074 |
| AccI | GTMKAC | 1 cut(s) | 194 |
| AciI | CCGC | 5 cut(s) | 396, 451, 656, 1866, 2074 |
| AclWI | GGATC | 6 cut(s) | 846, 1018, 1149, 1572, 1585, 2141 |
| AcoI | YGGCCR | 1 cut(s) | 1894 |
| AcsI | RAATTY | 4 cut(s) | 153, 305, 965, 1039 |
| AcuI | CTGAAG | 1 cut(s) | 1396 |
| AfaI | GTAC | 4 cut(s) | 235, 286, 1834, 2036 |
| AfeI | AGCGCT | 1 cut(s) | 538 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 331, 395, 687, 1693, 1709, 1710 |
| AjiI | CACGTC | 1 cut(s) | 198 |
| AjnI | CCWGG | 5 cut(s) | 388, 462, 1338, 1549, 2041 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 957, 989 |
| Alw21I | GWGCWC | 2 cut(s) | 834, 1558 |
| Alw26I | GTCTC | 1 cut(s) | 21 |
| AlwI | GGATC | 6 cut(s) | 846, 1018, 1149, 1572, 1585, 2141 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1550 |
| Ama87I | CYCGRG | 1 cut(s) | 1709 |
| Aor51HI | AGCGCT | 1 cut(s) | 538 |
| AoxI | GGCC | 2 cut(s) | 1894, 2044 |
| ApeKI | GCWGC | 8 cut(s) | 114, 534, 747, 755, 1283, 1508, 2009, 2021 |
| ApoI | RAATTY | 4 cut(s) | 153, 305, 965, 1039 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1696 |
| AspA2I | CCTAGG | 1 cut(s) | 1027 |
| AspLEI | GCGC | 2 cut(s) | 539, 1618 |
| AspS9I | GGNCC | 2 cut(s) | 213, 398 |
| AsuC2I | CCSGG | 2 cut(s) | 1710, 1711 |
| AsuHPI | GGTGA | 3 cut(s) | 23, 1193, 1261 |
| AsuNHI | GCTAGC | 1 cut(s) | 2017 |
| AvaI | CYCGRG | 1 cut(s) | 1709 |
| AvaII | GGWCC | 2 cut(s) | 213, 398 |
| AvrII | CCTAGG | 1 cut(s) | 1027 |
| BaeGI | GKGCMC | 1 cut(s) | 794 |
| BalI | TGGCCA | 1 cut(s) | 1896 |
| BamHI | GGATCC | 1 cut(s) | 1577 |
| BanI | GGYRCC | 1 cut(s) | 269 |
| BanII | GRGCYC | 1 cut(s) | 834 |
| BbsI | GAAGAC | 2 cut(s) | 195, 1503 |
| Bbv12I | GWGCWC | 2 cut(s) | 834, 1558 |
| BbvCI | CCTCAGC | 1 cut(s) | 1169 |
| BbvI | GCAGC | 8 cut(s) | 126, 546, 734, 742, 1270, 1495, 1996, 2033 |
| BceAI | ACGGC | 1 cut(s) | 1017 |
| BciT130I | CCWGG | 5 cut(s) | 390, 464, 1340, 1551, 2043 |
| BcnI | CCSGG | 2 cut(s) | 1710, 1711 |
| BcoDI | GTCTC | 1 cut(s) | 21 |
| BfaI | CTAG | 8 cut(s) | 282, 351, 1028, 1110, 1154, 1451, 2018, 2157 |
| BfmI | CTRYAG | 3 cut(s) | 225, 756, 1998 |
| BfoI | RGCGCY | 1 cut(s) | 540 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 278, 1340 |
| BglII | AGATCT | 1 cut(s) | 53 |
| BlnI | CCTAGG | 1 cut(s) | 1027 |
| BlpI | GCTNAGC | 1 cut(s) | 941 |
| BmcAI | AGTACT | 1 cut(s) | 286 |
| Bme1390I | CCNGG | 7 cut(s) | 390, 464, 1340, 1551, 1710, 1711, 2043 |
| Bme18I | GGWCC | 2 cut(s) | 213, 398 |
| BmeT110I | CYCGRG | 1 cut(s) | 1709 |
| BmgBI | CACGTC | 1 cut(s) | 198 |
| BmgT120I | GGNCC | 2 cut(s) | 213, 398 |
| BmiI | GGNNCC | 2 cut(s) | 271, 1579 |
| BmrFI | CCNGG | 7 cut(s) | 390, 464, 1340, 1551, 1710, 1711, 2043 |
| BmrI | ACTGGG | 1 cut(s) | 1513 |
| BmsI | GCATC | 1 cut(s) | 1598 |
| BmtI | GCTAGC | 1 cut(s) | 2021 |
| BmuI | ACTGGG | 1 cut(s) | 1513 |
| BpiI | GAAGAC | 2 cut(s) | 195, 1503 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1169 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 941 |
| BpuEI | CTTGAG | 1 cut(s) | 31 |
| BpuMI | CCSGG | 2 cut(s) | 1710, 1711 |
| BsaBI | GATNNNNATC | 1 cut(s) | 435 |
| BsaJI | CCNNGG | 3 cut(s) | 888, 1027, 1709 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 331, 395, 687, 1693, 1709, 1710 |
| Bse118I | RCCGGY | 1 cut(s) | 72 |
| Bse1I | ACTGG | 4 cut(s) | 519, 545, 1508, 1964 |
| Bse3DI | GCAATG | 2 cut(s) | 417, 529 |
| Bse8I | GATNNNNATC | 1 cut(s) | 435 |
| BseBI | CCWGG | 5 cut(s) | 390, 464, 1340, 1551, 2043 |
| BseDI | CCNNGG | 3 cut(s) | 888, 1027, 1709 |
| BseGI | GGATG | 7 cut(s) | 436, 735, 1134, 1271, 1335, 1589, 2086 |
| BseJI | GATNNNNATC | 1 cut(s) | 435 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 331, 395, 687, 1693, 1709, 1710 |
| BseMI | GCAATG | 2 cut(s) | 417, 529 |
| BseMII | CTCAG | 6 cut(s) | 288, 633, 932, 1183, 1679, 1850 |
| BseNI | ACTGG | 4 cut(s) | 519, 545, 1508, 1964 |
| BseRI | GAGGAG | 2 cut(s) | 1751, 1868 |
| BseSI | GKGCMC | 1 cut(s) | 794 |
| BseXI | GCAGC | 8 cut(s) | 126, 546, 734, 742, 1270, 1495, 1996, 2033 |
| BsgI | GTGCAG | 1 cut(s) | 133 |
| Bsh1285I | CGRYCG | 1 cut(s) | 781 |
| BshFI | GGCC | 2 cut(s) | 1896, 2046 |
| BshNI | GGYRCC | 1 cut(s) | 269 |
| BsiEI | CGRYCG | 1 cut(s) | 781 |
| BsiHKAI | GWGCWC | 2 cut(s) | 834, 1558 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1709 |
| BsiSI | CCGG | 2 cut(s) | 73, 1710 |
| BslFI | GGGAC | 2 cut(s) | 901, 1726 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 331, 395, 687, 1693, 1709, 1710 |
| BsmAI | GTCTC | 1 cut(s) | 21 |
| BsmFI | GGGAC | 2 cut(s) | 901, 1726 |
| BsmI | GAATGC | 1 cut(s) | 1004 |
| BsnI | GGCC | 2 cut(s) | 1896, 2046 |
| BsoBI | CYCGRG | 1 cut(s) | 1709 |
| Bsp1286I | GDGCHC | 3 cut(s) | 794, 834, 1558 |
| Bsp1407I | TGTACA | 1 cut(s) | 233 |
| Bsp143I | GATC | 7 cut(s) | 53, 62, 838, 1023, 1141, 1577, 2146 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 941 |
| BspACI | CCGC | 5 cut(s) | 396, 451, 656, 1866, 2074 |
| BspANI | GGCC | 2 cut(s) | 1896, 2046 |
| BspCNI | CTCAG | 6 cut(s) | 287, 632, 933, 1182, 1680, 1849 |
| BspHI | TCATGA | 1 cut(s) | 295 |
| BspLI | GGNNCC | 2 cut(s) | 271, 1579 |
| BspMAI | CTGCAG | 1 cut(s) | 760 |
| BspOI | GCTAGC | 1 cut(s) | 2021 |
| BspPI | GGATC | 6 cut(s) | 846, 1018, 1149, 1572, 1585, 2141 |
| BspT107I | GGYRCC | 1 cut(s) | 269 |
| BsrBI | CCGCTC | 1 cut(s) | 2074 |
| BsrDI | GCAATG | 2 cut(s) | 417, 529 |
| BsrFI | RCCGGY | 1 cut(s) | 72 |
| BsrGI | TGTACA | 1 cut(s) | 233 |
| BsrI | ACTGG | 4 cut(s) | 519, 545, 1508, 1964 |
| BssAI | RCCGGY | 1 cut(s) | 72 |
| BssECI | CCNNGG | 3 cut(s) | 888, 1027, 1709 |
| BssMI | GATC | 7 cut(s) | 53, 62, 838, 1023, 1141, 1577, 2146 |
| BssT1I | CCWWGG | 1 cut(s) | 1027 |
| Bst2UI | CCWGG | 5 cut(s) | 390, 464, 1340, 1551, 2043 |
| Bst4CI | ACNGT | 5 cut(s) | 779, 851, 1378, 1431, 1486 |
| Bst6I | CTCTTC | 1 cut(s) | 951 |
| BstAUI | TGTACA | 1 cut(s) | 233 |
| BstC8I | GCNNGC | 6 cut(s) | 408, 1034, 1332, 1478, 1679, 2019 |
| BstDEI | CTNAG | 9 cut(s) | 274, 619, 880, 941, 1078, 1169, 1435, 1688, 1836 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 685, 1691 |
| BstF5I | GGATG | 7 cut(s) | 436, 735, 1134, 1271, 1335, 1589, 2086 |
| BstH2I | RGCGCY | 1 cut(s) | 540 |
| BstHHI | GCGC | 2 cut(s) | 539, 1618 |
| BstKTI | GATC | 7 cut(s) | 56, 65, 841, 1026, 1144, 1580, 2149 |
| BstMAI | GTCTC | 1 cut(s) | 21 |
| BstMBI | GATC | 7 cut(s) | 53, 62, 838, 1023, 1141, 1577, 2146 |
| BstMCI | CGRYCG | 1 cut(s) | 781 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 236, 278, 761, 890, 1340, 1364, 1624, 1754, 2018 |
| BstNI | CCWGG | 5 cut(s) | 390, 464, 1340, 1551, 2043 |
| BstNSI | RCATGY | 2 cut(s) | 1290, 1334 |
| BstSCI | CCNGG | 7 cut(s) | 388, 462, 1338, 1549, 1708, 1709, 2041 |
| BstSFI | CTRYAG | 3 cut(s) | 225, 756, 1998 |
| BstSLI | GKGCMC | 1 cut(s) | 794 |
| BstV1I | GCAGC | 8 cut(s) | 126, 546, 734, 742, 1270, 1495, 1996, 2033 |
| BstV2I | GAAGAC | 2 cut(s) | 195, 1503 |
| BstX2I | RGATCY | 4 cut(s) | 53, 1141, 1577, 2146 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2113 |
| BstYI | RGATCY | 4 cut(s) | 53, 1141, 1577, 2146 |
| BsuRI | GGCC | 2 cut(s) | 1896, 2046 |
| BtgZI | GCGATG | 1 cut(s) | 831 |
| BtrI | CACGTC | 1 cut(s) | 198 |
| BtsCI | GGATG | 7 cut(s) | 436, 735, 1134, 1271, 1335, 1589, 2086 |
| BtsI | GCAGTG | 1 cut(s) | 765 |
| BtsIMutI | CAGTG | 4 cut(s) | 282, 526, 765, 867 |
| Cac8I | GCNNGC | 6 cut(s) | 408, 1034, 1332, 1478, 1679, 2019 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1550 |
| CciI | TCATGA | 1 cut(s) | 295 |
| CfoI | GCGC | 2 cut(s) | 539, 1618 |
| Cfr10I | RCCGGY | 1 cut(s) | 72 |
| Cfr13I | GGNCC | 2 cut(s) | 213, 398 |
| Cfr9I | CCCGGG | 1 cut(s) | 1709 |
| CsiI | ACCWGGT | 2 cut(s) | 462, 1549 |
| Csp6I | GTAC | 4 cut(s) | 234, 285, 1833, 2035 |
| CviQI | GTAC | 4 cut(s) | 234, 285, 1833, 2035 |
| DdeI | CTNAG | 9 cut(s) | 274, 619, 880, 941, 1078, 1169, 1435, 1688, 1836 |
| DpnI | GATC | 7 cut(s) | 55, 64, 840, 1025, 1143, 1579, 2148 |
| DpnII | GATC | 7 cut(s) | 53, 62, 838, 1023, 1141, 1577, 2146 |
| EaeI | YGGCCR | 1 cut(s) | 1894 |
| Eam1104I | CTCTTC | 1 cut(s) | 951 |
| EarI | CTCTTC | 1 cut(s) | 951 |
| Ecl136II | GAGCTC | 1 cut(s) | 832 |
| Eco130I | CCWWGG | 1 cut(s) | 1027 |
| Eco24I | GRGCYC | 1 cut(s) | 834 |
| Eco47I | GGWCC | 2 cut(s) | 213, 398 |
| Eco47III | AGCGCT | 1 cut(s) | 538 |
| Eco53kI | GAGCTC | 1 cut(s) | 832 |
| Eco57I | CTGAAG | 1 cut(s) | 1396 |
| Eco88I | CYCGRG | 1 cut(s) | 1709 |
| EcoICRI | GAGCTC | 1 cut(s) | 832 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 685, 1691 |
| EcoRII | CCWGG | 5 cut(s) | 388, 462, 1338, 1549, 2041 |
| EcoT14I | CCWWGG | 1 cut(s) | 1027 |
| EcoT38I | GRGCYC | 1 cut(s) | 834 |
| ErhI | CCWWGG | 1 cut(s) | 1027 |
| FaqI | GGGAC | 2 cut(s) | 901, 1726 |
| FblI | GTMKAC | 1 cut(s) | 194 |
| FokI | GGATG | 7 cut(s) | 443, 742, 1141, 1278, 1322, 1576, 2093 |
| FriOI | GRGCYC | 1 cut(s) | 834 |
| FspBI | CTAG | 8 cut(s) | 282, 351, 1028, 1110, 1154, 1451, 2018, 2157 |
| GlaI | GCGC | 2 cut(s) | 538, 1617 |
| HaeII | RGCGCY | 1 cut(s) | 540 |
| HaeIII | GGCC | 2 cut(s) | 1896, 2046 |
| HapII | CCGG | 2 cut(s) | 73, 1710 |
| HhaI | GCGC | 2 cut(s) | 539, 1618 |
| Hin6I | GCGC | 2 cut(s) | 537, 1616 |
| HinP1I | GCGC | 2 cut(s) | 537, 1616 |
| HincII | GTYRAC | 1 cut(s) | 195 |
| HindII | GTYRAC | 1 cut(s) | 195 |
| HinfI | GANTC | 5 cut(s) | 132, 344, 374, 1697, 2050 |
| HpaII | CCGG | 2 cut(s) | 73, 1710 |
| HphI | GGTGA | 3 cut(s) | 23, 1193, 1261 |
| Hpy166II | GTNNAC | 3 cut(s) | 195, 475, 524 |
| Hpy188I | TCNGA | 7 cut(s) | 62, 67, 622, 1296, 1648, 1819, 2071 |
| Hpy188III | TCNNGA | 9 cut(s) | 48, 296, 401, 595, 1145, 1307, 1636, 2086, 2157 |
| Hpy8I | GTNNAC | 3 cut(s) | 195, 475, 524 |
| Hpy99I | CGWCG | 3 cut(s) | 196, 199, 1563 |
| HpyAV | CCTTC | 3 cut(s) | 114, 421, 1098 |
| HpyCH4III | ACNGT | 5 cut(s) | 779, 851, 1378, 1431, 1486 |
| HpyCH4IV | ACGT | 4 cut(s) | 197, 526, 1643, 2165 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 236, 278, 761, 890, 1340, 1364, 1624, 1754, 2018 |
| HpyF3I | CTNAG | 9 cut(s) | 274, 619, 880, 941, 1078, 1169, 1435, 1688, 1836 |
| HpySE526I | ACGT | 4 cut(s) | 197, 526, 1643, 2165 |
| HspAI | GCGC | 2 cut(s) | 537, 1616 |
| Kzo9I | GATC | 7 cut(s) | 53, 62, 838, 1023, 1141, 1577, 2146 |
| LmnI | GCTCC | 4 cut(s) | 354, 1467, 1820, 2071 |
| Lsp1109I | GCAGC | 8 cut(s) | 126, 546, 734, 742, 1270, 1495, 1996, 2033 |
| LweI | GCATC | 1 cut(s) | 1598 |
| MabI | ACCWGGT | 2 cut(s) | 462, 1549 |
| MaeI | CTAG | 8 cut(s) | 282, 351, 1028, 1110, 1154, 1451, 2018, 2157 |
| MaeII | ACGT | 4 cut(s) | 197, 526, 1643, 2165 |
| MaeIII | GTNAC | 8 cut(s) | 182, 375, 773, 1249, 1603, 1903, 1966, 1980 |
| MalI | GATC | 7 cut(s) | 55, 64, 840, 1025, 1143, 1579, 2148 |
| MbiI | CCGCTC | 1 cut(s) | 2074 |
| MboI | GATC | 7 cut(s) | 53, 62, 838, 1023, 1141, 1577, 2146 |
| MfeI | CAATTG | 2 cut(s) | 84, 1886 |
| MflI | RGATCY | 4 cut(s) | 53, 1141, 1577, 2146 |
| MhlI | GDGCHC | 3 cut(s) | 794, 834, 1558 |
| MlsI | TGGCCA | 1 cut(s) | 1896 |
| MluNI | TGGCCA | 1 cut(s) | 1896 |
| MlyI | GAGTC | 1 cut(s) | 383 |
| Mox20I | TGGCCA | 1 cut(s) | 1896 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1696 |
| MscI | TGGCCA | 1 cut(s) | 1896 |
| MseI | TTAA | 7 cut(s) | 39, 309, 318, 786, 1158, 1536, 1683 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1244 |
| Msp20I | TGGCCA | 1 cut(s) | 1896 |
| MspA1I | CMGCKG | 1 cut(s) | 1997 |
| MspI | CCGG | 2 cut(s) | 73, 1710 |
| MspR9I | CCNGG | 7 cut(s) | 390, 464, 1340, 1551, 1710, 1711, 2043 |
| MunI | CAATTG | 2 cut(s) | 84, 1886 |
| Mva1269I | GAATGC | 1 cut(s) | 1004 |
| MvaI | CCWGG | 5 cut(s) | 390, 464, 1340, 1551, 2043 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 236, 278, 761, 890, 1340, 1364, 1624, 1754, 2018 |
| NciI | CCSGG | 2 cut(s) | 1710, 1711 |
| NdeII | GATC | 7 cut(s) | 53, 62, 838, 1023, 1141, 1577, 2146 |
| NheI | GCTAGC | 1 cut(s) | 2017 |
| NlaIV | GGNNCC | 2 cut(s) | 271, 1579 |
| NmuCI | GTSAC | 2 cut(s) | 375, 1249 |
| NspI | RCATGY | 2 cut(s) | 1290, 1334 |
| PaeI | GCATGC | 1 cut(s) | 1334 |
| PagI | TCATGA | 1 cut(s) | 295 |
| PctI | GAATGC | 1 cut(s) | 1004 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1696 |
| PfeI | GAWTC | 4 cut(s) | 132, 344, 1697, 2050 |
| PflFI | GACNNNGTC | 2 cut(s) | 199, 1642 |
| PleI | GAGTC | 1 cut(s) | 382 |
| PpsI | GAGTC | 1 cut(s) | 382 |
| PsiI | TTATAA | 2 cut(s) | 987, 1665 |
| Psp124BI | GAGCTC | 1 cut(s) | 834 |
| Psp6I | CCWGG | 5 cut(s) | 388, 462, 1338, 1549, 2041 |
| PspGI | CCWGG | 5 cut(s) | 388, 462, 1338, 1549, 2041 |
| PspN4I | GGNNCC | 2 cut(s) | 271, 1579 |
| PspPI | GGNCC | 2 cut(s) | 213, 398 |
| PstI | CTGCAG | 1 cut(s) | 760 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1550 |
| PsuI | RGATCY | 4 cut(s) | 53, 1141, 1577, 2146 |
| PsyI | GACNNNGTC | 2 cut(s) | 199, 1642 |
| PvuII | CAGCTG | 1 cut(s) | 1997 |
| RsaI | GTAC | 4 cut(s) | 235, 286, 1834, 2036 |
| RsaNI | GTAC | 4 cut(s) | 234, 285, 1833, 2035 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1244 |
| SacI | GAGCTC | 1 cut(s) | 834 |
| SalI | GTCGAC | 1 cut(s) | 193 |
| SaqAI | TTAA | 7 cut(s) | 39, 309, 318, 786, 1158, 1536, 1683 |
| Sau3AI | GATC | 7 cut(s) | 53, 62, 838, 1023, 1141, 1577, 2146 |
| Sau96I | GGNCC | 2 cut(s) | 213, 398 |
| ScaI | AGTACT | 1 cut(s) | 286 |
| SchI | GAGTC | 1 cut(s) | 383 |
| ScrFI | CCNGG | 7 cut(s) | 390, 464, 1340, 1551, 1710, 1711, 2043 |
| SduI | GDGCHC | 3 cut(s) | 794, 834, 1558 |
| SexAI | ACCWGGT | 2 cut(s) | 462, 1549 |
| SfaNI | GCATC | 1 cut(s) | 1598 |
| SfcI | CTRYAG | 3 cut(s) | 225, 756, 1998 |
| SgrDI | CGTCGACG | 1 cut(s) | 193 |
| SinI | GGWCC | 2 cut(s) | 213, 398 |
| SmaI | CCCGGG | 1 cut(s) | 1711 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1244 |
| SmlI | CTYRAG | 1 cut(s) | 46 |
| SmoI | CTYRAG | 1 cut(s) | 46 |
| SphI | GCATGC | 1 cut(s) | 1334 |
| SsiI | CCGC | 5 cut(s) | 396, 451, 656, 1866, 2074 |
| SspMI | CTAG | 8 cut(s) | 282, 351, 1028, 1110, 1154, 1451, 2018, 2157 |
| SstI | GAGCTC | 1 cut(s) | 834 |
| StyD4I | CCNGG | 7 cut(s) | 388, 462, 1338, 1549, 1708, 1709, 2041 |
| StyI | CCWWGG | 1 cut(s) | 1027 |
| TaaI | ACNGT | 5 cut(s) | 779, 851, 1378, 1431, 1486 |
| TaiI | ACGT | 4 cut(s) | 200, 529, 1646, 2168 |
| TaqI | TCGA | 5 cut(s) | 146, 194, 327, 498, 594 |
| TatI | WGTACW | 3 cut(s) | 233, 284, 2034 |
| TauI | GCSGC | 2 cut(s) | 658, 2077 |
| TfiI | GAWTC | 4 cut(s) | 132, 344, 1697, 2050 |
| Tru1I | TTAA | 7 cut(s) | 39, 309, 318, 786, 1158, 1536, 1683 |
| Tru9I | TTAA | 7 cut(s) | 39, 309, 318, 786, 1158, 1536, 1683 |
| TscAI | CASTG | 4 cut(s) | 282, 526, 765, 867 |
| TseFI | GTSAC | 2 cut(s) | 375, 1249 |
| TseI | GCWGC | 8 cut(s) | 114, 534, 747, 755, 1283, 1508, 2009, 2021 |
| Tsp45I | GTSAC | 2 cut(s) | 375, 1249 |
| TspDTI | ATGAA | 9 cut(s) | 138, 146, 195, 312, 357, 1034, 1186, 1228, 1272 |
| TspGWI | ACGGA | 2 cut(s) | 352, 1730 |
| TspMI | CCCGGG | 1 cut(s) | 1709 |
| TspRI | CASTG | 4 cut(s) | 282, 526, 765, 867 |
| Tth111I | GACNNNGTC | 2 cut(s) | 199, 1642 |
| VpaK11BI | GGWCC | 2 cut(s) | 213, 398 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 685, 1691 |
| XapI | RAATTY | 4 cut(s) | 153, 305, 965, 1039 |
| XbaI | TCTAGA | 1 cut(s) | 2156 |
| XceI | RCATGY | 2 cut(s) | 1290, 1334 |
| XmaI | CCCGGG | 1 cut(s) | 1709 |
| XmaJI | CCTAGG | 1 cut(s) | 1027 |
| XmiI | GTMKAC | 1 cut(s) | 194 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1696 |
| XspI | CTAG | 8 cut(s) | 282, 351, 1028, 1110, 1154, 1451, 2018, 2157 |
| ZrmI | AGTACT | 1 cut(s) | 286 |