Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0008152

Physical Location & Seq

Genomic Coordinates Reverse (-)

60746858 .. 60752660

Gene Structure 5803 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG408600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2445 bp

ATGATCACATATGGTGATCTTTCATATGCACCTTGCAGGAACTTGATGGCAAAGCAAGACATGTCAGAACTTGGATTTGTAAAGGAAAATGGTAAAGAAGCTTCTGAAGAGAAGATTACTGAGAGGATCGATGGAGCTAGCCACTTTCATGATGTTCCTTTTACCCTTAGCCTCAAAGTTTATTCATATCAGAAGGGTTGTTTCAGAAACAACCTTTCGAGCTTTGCAGAACCTGCGTCTGCAATTGGCAGCAGAAGTCTTTCTCCCGGAAAGAGTTTTGGTTCAGGAATGAAGGGAATTGCACCAACCGTGACAGATACTTTGCGCACTCTCACTCTTTGCCTCGATGACTACGATGAAAGCCTGTCCTTTTATAACTTACATGGCTCATTGTACCTTCCCTTTTCTCCTTTTCGGTTCTCCATGGCTTCCCATTTGTCTCTGCTCAAACCTCATCTCTCTTACCAATTAAGATCCGTTACACCAGAAAACAGACAAACTATAACCAATTTGCATCAACCTACAAGGTGCAGTACAAAGGAACAAGGAACTTATGGCTTTCCAAAGAAAAGTCTCTTGTGTAGCTTATTGTCTAGATGTTACCCTTCGTCATGGTGGTCTTCATCTAGAACATTATCATCTACAGTTTGTAAAGCTTATTCTGGTGAAGCAAGTAGTGAGAATGGTGCTGCAGTGGCTAAAATCCATGACCGTGAATTCAAATTTAACCGGGTCAATTGCCTTGTGTGGGTGCTGCATGAATCTGCTAGGAGCTTCTCCCTTGCAATTGAGGCGCTAGAATTGACAGGAAGTAGTCCTGGGGTTGCAATGTCATGGTCTGGGAAGGATATACATGCATGGCATAGACGGCTTTCTTATCAGGTGGCACTTTATGTGTTGTTGAAAACAGCGATTGAAGTAGAAACTTTGCTTTCTAGTGAACGTCATTACAGTGACTCTTCTCTAGTTAGCGATATCTTAACCACAAAGATCAATTCAGTTGGTGAACACATTGAGAGTCAATTGAACATGAGACACTCAGAGTTAGTAGAATGGTTTAGAGTGGTGGAGTTTCCACGGATTGCAGGATTTTTCATTCCCTTGTTAAGAAAGTGGTCTATGGAGTACGCAGGAAGTGGTGTAGCAGGGATAGTTGTGGCCATCAGCTGCTGCGCTGCAGTGGCTAAATTGGGTCCTGGGCGTGTAAAGTGTTCTCTTTTTGCATTTTGTATTGAGGATGTTATGGTAGAGCTCATGGATCTCTCACACAGTCTTGTATCGGTGGAAAGATTACATCACTTGGCCATTGAGGCAGGATTTGAATTGGACTTTCTGTCCCATTTTGGTAGAAAGGTTCTGCTAAGCAACAAAGGGGAAGAGGTAGAATTTTGGATTGGGTTGGCTTATGAAAAACTTTCATCAGCATTTCACAATGAAAGTGTGATTCCAGGCAAGCAGAATTTTCATGACAAGGTTCAAGCAGATACTTTGGCTACTTTGGGACTGTTTGCATATCTCGGAAGAAAGACTAGATTATTCTTGTCAACAATGGGCATAAACGATATTGATGATCTACTTAAGGACTTCCTTAGCTACTTGGAGTGTGGTATCATTTTCATTTACCCAGAGTTTGCTTCCATAGCAGTGTATCAACAGTTCATGGAGGTAGTAACTGATGAAATTGGATGGCTTGATTTTTACGCTGCATGTCCTCCAAAAAGTATTCAAGAGAGACGAAAAAGCAAATTGCATACGATTCAGGCGGAAAAAGAGATTGCTCTTTCTGCTGTATTTACTGTATGCTATGATGTCTACTCTGGATTTGCTCACTTTTATCGTTCAACTCAACTGTCCCTGGATAGTGATTTGCTAGAATTTTTGCTCCAGAGTCAGAGCTTGCTTACTATTTGTTTGGAAGACTACTGGTCTGCCTACGATAAATCAAGTGATTGGTCAATGATTGCAGACTGTGATTCTGTTGCAACCAAGGTATCAACAATCGCCACCAAGGTATCTTTAACAATGGACGCACATGATGCACAATGGGAGCCAAGTCACTTAAAAACTGCCGGAGATAGTGAAAAGCATAGGTCTAAACACAGTCTTCAACTGAGAACGGCTCCACGCTTGCTTGGGATGGAAAGCATAACGTCTATGGAGGAGGGCAGTGCCAGAAAACAAAGACATCTCCATCGAATATTGATTAAAAAGTATAGTGATCACTTGGTATCTACAAGCTCTGATGTATGGATGGGTACTCACTTGCTTTTCATAGACCTCATGAGTGCTTTGGAGCTGCTCCTGAAACAATTGCGTGGCCACAAGGTTTCAAGGAGGGAAAGAAATAAGTTACAAAGGACACTAAATGACATTACTTCACTTGTTCCAGTTACAATTCTAATGCTACTTCCTGTAAGTGCCGTTTTGACATCTTGTGTTTCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LETM1

Protein Analysis

814

Amino Acids

91.35

Weight (kDa)

6.67

Isoelectric Point (pI)

44.1

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008152)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g32010 FvH4_6g32010
malus_domestica	MD09G1207000.v1.1 MD17G1187700.v1.1
prunus_persica	Prupe.3G063100_v2.0.a1 Prupe.3G063100_v2.0.a1 Prupe.3G063100_v2.0.a1 Prupe.3G063100_v2.0.a1 Prupe.3G063100_v2.0.a1 Prupe.3G063100_v2.0.a1 Prupe.3G063100_v2.0.a1 Prupe.3G063100_v2.0.a1
pyrus_communis	pycom09g12340 pycom17g19660
rosa_chinensis	RchiOBHm_Chr2g0139611
rosa_laevigata	RLG00000019822
rosa_multiflora	Rmu_sc0032018.1_g000001
rosa_roxburghii	Rroxscaffold_2G00105350
rosa_rugosa	Rorug02G0358700
rosa_samantha	Rh2AG408600 Rh2BG419100 Rh2CG394600 Rh2DG428200
rosa_wichuraiana	Rw2G033510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	375
Acc16I	TGCGCA	1 cut(s)	326
Acc36I	ACCTGC	1 cut(s)	241
AccI	GTMKAC	1 cut(s)	1812
AciI	CCGC	1 cut(s)	1763
AclWI	GGATC	3 cut(s)	134, 468, 1266
AcoI	YGGCCR	3 cut(s)	1158, 1302, 2317
AcsI	RAATTY	5 cut(s)	716, 722, 1385, 1459, 1874
AcuI	CTGAAG	1 cut(s)	126
AfaI	GTAC	4 cut(s)	395, 535, 1127, 2257
AfiI	CCNNNNNNNGG	1 cut(s)	748
AflII	CTTAAG	1 cut(s)	1577
AflIII	ACRYGT	1 cut(s)	60
AhdI	GACNNNNNGTC	2 cut(s)	1333, 1924
AjnI	CCWGG	4 cut(s)	817, 1195, 1447, 1854
AjuI	GAANNNNNNNTTGG	2 cut(s)	1377, 1409
Alw21I	GWGCWC	1 cut(s)	1254
Alw26I	GTCTC	4 cut(s)	444, 578, 1027, 1726
AlwI	GGATC	3 cut(s)	134, 468, 1266
AlwNI	CAGNNNCTG	2 cut(s)	233, 1170
AoxI	GGCC	3 cut(s)	1158, 1302, 2317
ApeKI	GCWGC	8 cut(s)	249, 689, 754, 1167, 1170, 1175, 1703, 2296
ApoI	RAATTY	5 cut(s)	716, 722, 1385, 1459, 1874
ArsI	GACNNNNNNTTYG	2 cut(s)	304, 336
Asp700I	GAANNNNTTC	1 cut(s)	259
AspLEI	GCGC	3 cut(s)	327, 796, 1175
AspS9I	GGNCC	1 cut(s)	1193
AsuC2I	CCSGG	2 cut(s)	267, 731
AsuHPI	GGTGA	3 cut(s)	26, 677, 1016
AsuNHI	GCTAGC	1 cut(s)	137
AvaII	GGWCC	1 cut(s)	1193
BaeI	ACNNNNGTAYC	4 cut(s)	1974, 1995, 2007, 2028
BalI	TGGCCA	3 cut(s)	1160, 1304, 2319
BanII	GRGCYC	1 cut(s)	1254
BarI	GAAGNNNNNNTAC	2 cut(s)	85, 117
BbsI	GAAGAC	3 cut(s)	612, 1923, 2096
Bbv12I	GWGCWC	1 cut(s)	1254
BbvI	GCAGC	8 cut(s)	261, 676, 741, 1154, 1157, 1162, 1690, 2283
BccI	CCATC	7 cut(s)	40, 125, 1169, 1680, 2131, 2199, 2245
BceAI	ACGGC	3 cut(s)	884, 2133, 2405
BciT130I	CCWGG	4 cut(s)	819, 1197, 1449, 1856
BclI	TGATCA	2 cut(s)	3, 2218
BcnI	CCSGG	2 cut(s)	267, 731
BcoDI	GTCTC	4 cut(s)	444, 578, 1027, 1726
BfaI	CTAG	9 cut(s)	138, 594, 627, 768, 797, 936, 965, 1530, 1871
BfmI	CTRYAG	3 cut(s)	642, 690, 1176
BfoI	RGCGCY	1 cut(s)	797
BfrI	CTTAAG	1 cut(s)	1577
BfuAI	ACCTGC	1 cut(s)	241
BglI	GCCNNNNNGGC	1 cut(s)	1310
BisI	GCNGC	8 cut(s)	250, 690, 755, 1168, 1171, 1176, 1704, 2297
BlpI	GCTNAGC	1 cut(s)	1361
BlsI	GCNGC	8 cut(s)	251, 691, 756, 1169, 1172, 1177, 1705, 2298
Bme1390I	CCNGG	6 cut(s)	267, 731, 819, 1197, 1449, 1856
Bme18I	GGWCC	1 cut(s)	1193
BmeRI	GACNNNNNGTC	2 cut(s)	1333, 1924
BmgT120I	GGNCC	1 cut(s)	1193
BmiI	GGNNCC	3 cut(s)	1194, 2049, 2121
BmrFI	CCNGG	6 cut(s)	267, 731, 819, 1197, 1449, 1856
BmsI	GCATC	2 cut(s)	523, 2026
BmtI	GCTAGC	1 cut(s)	141
BpiI	GAAGAC	3 cut(s)	612, 1923, 2096
BplI	GAGNNNNNCTC	2 cut(s)	2104, 2136
BpmI	CTGGAG	1 cut(s)	1868
Bpu10I	CCTNAGC	2 cut(s)	167, 1589
Bpu1102I	GCTNAGC	1 cut(s)	1361
BpuMI	CCSGG	2 cut(s)	267, 731
Bsa29I	ATCGAT	1 cut(s)	129
BsaJI	CCNNGG	7 cut(s)	423, 818, 1076, 1196, 1854, 1986, 2007
Bsc4I	CCNNNNNNNGG	1 cut(s)	748
Bse1I	ACTGG	2 cut(s)	1928, 2387
Bse3DI	GCAATG	1 cut(s)	834
BseBI	CCWGG	4 cut(s)	819, 1197, 1449, 1856
BseCI	ATCGAT	1 cut(s)	129
BseDI	CCNNGG	7 cut(s)	423, 818, 1076, 1196, 1854, 1986, 2007
BseGI	GGATG	4 cut(s)	1243, 1691, 2142, 2256
BseLI	CCNNNNNNNGG	1 cut(s)	748
BseMI	GCAATG	1 cut(s)	834
BseMII	CTCAG	3 cut(s)	111, 1053, 2102
BseNI	ACTGG	2 cut(s)	1928, 2387
BseRI	GAGGAG	1 cut(s)	2174
BseXI	GCAGC	8 cut(s)	261, 676, 741, 1154, 1157, 1162, 1690, 2283
BsgI	GTGCAG	1 cut(s)	550
BshFI	GGCC	3 cut(s)	1160, 1304, 2319
BshVI	ATCGAT	1 cut(s)	129
BsiHKAI	GWGCWC	1 cut(s)	1254
BsiSI	CCGG	3 cut(s)	267, 730, 2070
BslFI	GGGAC	3 cut(s)	1321, 1515, 1837
BslI	CCNNNNNNNGG	1 cut(s)	748
BsmAI	GTCTC	4 cut(s)	444, 578, 1027, 1726
BsmBI	CGTCTC	1 cut(s)	1726
BsmFI	GGGAC	3 cut(s)	1321, 1515, 1837
BsnI	GGCC	3 cut(s)	1160, 1304, 2319
Bsp1286I	GDGCHC	1 cut(s)	1254
Bsp143I	GATC	8 cut(s)	3, 16, 126, 473, 990, 1258, 1570, 2218
Bsp1720I	GCTNAGC	1 cut(s)	1361
Bsp19I	CCATGG	1 cut(s)	423
BspACI	CCGC	1 cut(s)	1763
BspANI	GGCC	3 cut(s)	1160, 1304, 2319
BspCNI	CTCAG	3 cut(s)	112, 1052, 2103
BspDI	ATCGAT	1 cut(s)	129
BspHI	TCATGA	3 cut(s)	148, 1465, 2280
BspLI	GGNNCC	3 cut(s)	1194, 2049, 2121
BspMAI	CTGCAG	2 cut(s)	694, 1180
BspMI	ACCTGC	1 cut(s)	241
BspOI	GCTAGC	1 cut(s)	141
BspPI	GGATC	3 cut(s)	134, 468, 1266
BspTI	CTTAAG	1 cut(s)	1577
BsrDI	GCAATG	1 cut(s)	834
BsrI	ACTGG	2 cut(s)	1928, 2387
BssECI	CCNNGG	7 cut(s)	423, 818, 1076, 1196, 1854, 1986, 2007
BssMI	GATC	8 cut(s)	3, 16, 126, 473, 990, 1258, 1570, 2218
BssT1I	CCWWGG	3 cut(s)	423, 1986, 2007
Bst2UI	CCWGG	4 cut(s)	819, 1197, 1449, 1856
Bst6I	CTCTTC	3 cut(s)	102, 964, 1371
BstAFI	CTTAAG	1 cut(s)	1577
BstAPI	GCANNNNNTGC	2 cut(s)	233, 2036
BstC8I	GCNNGC	4 cut(s)	139, 1454, 1898, 2129
BstDEI	CTNAG	6 cut(s)	120, 167, 1039, 1361, 1589, 2111
BstDSI	CCRYGG	2 cut(s)	423, 1076
BstF5I	GGATG	4 cut(s)	1243, 1691, 2142, 2256
BstH2I	RGCGCY	1 cut(s)	797
BstHHI	GCGC	3 cut(s)	327, 796, 1175
BstKTI	GATC	8 cut(s)	6, 19, 129, 476, 993, 1261, 1573, 2221
BstMAI	GTCTC	4 cut(s)	444, 578, 1027, 1726
BstMBI	GATC	8 cut(s)	3, 16, 126, 473, 990, 1258, 1570, 2218
BstMWI	GCNNNNNNNGC	9 cut(s)	233, 695, 791, 868, 1181, 1310, 1640, 1784, 2036
BstNI	CCWGG	4 cut(s)	819, 1197, 1449, 1856
BstNSI	RCATGY	3 cut(s)	64, 857, 1710
BstSCI	CCNGG	6 cut(s)	265, 729, 817, 1195, 1447, 1854
BstSFI	CTRYAG	3 cut(s)	642, 690, 1176
BstV1I	GCAGC	8 cut(s)	261, 676, 741, 1154, 1157, 1162, 1690, 2283
BstV2I	GAAGAC	3 cut(s)	612, 1923, 2096
BstX2I	RGATCY	2 cut(s)	473, 1258
BstYI	RGATCY	2 cut(s)	473, 1258
Bsu15I	ATCGAT	1 cut(s)	129
BsuRI	GGCC	3 cut(s)	1160, 1304, 2319
BsuTUI	ATCGAT	1 cut(s)	129
BtgI	CCRYGG	2 cut(s)	423, 1076
BtsCI	GGATG	4 cut(s)	1243, 1691, 2142, 2256
BtsI	GCAGTG	4 cut(s)	699, 1185, 1650, 2173
BtsIMutI	CAGTG	5 cut(s)	699, 958, 1185, 1650, 2173
BveI	ACCTGC	1 cut(s)	241
Cac8I	GCNNGC	4 cut(s)	139, 1454, 1898, 2129
CaiI	CAGNNNCTG	2 cut(s)	233, 1170
CciI	TCATGA	3 cut(s)	148, 1465, 2280
CfoI	GCGC	3 cut(s)	327, 796, 1175
Cfr13I	GGNCC	1 cut(s)	1193
ClaI	ATCGAT	1 cut(s)	129
CseI	GACGC	2 cut(s)	225, 2036
Csp6I	GTAC	4 cut(s)	394, 534, 1126, 2256
CviQI	GTAC	4 cut(s)	394, 534, 1126, 2256
DdeI	CTNAG	6 cut(s)	120, 167, 1039, 1361, 1589, 2111
DpnI	GATC	8 cut(s)	5, 18, 128, 475, 992, 1260, 1572, 2220
DpnII	GATC	8 cut(s)	3, 16, 126, 473, 990, 1258, 1570, 2218
DriI	GACNNNNNGTC	2 cut(s)	1333, 1924
EaeI	YGGCCR	3 cut(s)	1158, 1302, 2317
Eam1104I	CTCTTC	3 cut(s)	102, 964, 1371
Eam1105I	GACNNNNNGTC	2 cut(s)	1333, 1924
EarI	CTCTTC	3 cut(s)	102, 964, 1371
EciI	GGCGGA	1 cut(s)	1778
Ecl136II	GAGCTC	1 cut(s)	1252
Eco130I	CCWWGG	3 cut(s)	423, 1986, 2007
Eco24I	GRGCYC	1 cut(s)	1254
Eco32I	GATATC	1 cut(s)	976
Eco47I	GGWCC	1 cut(s)	1193
Eco53kI	GAGCTC	1 cut(s)	1252
Eco57I	CTGAAG	1 cut(s)	126
EcoICRI	GAGCTC	1 cut(s)	1252
EcoO109I	RGGNCCY	1 cut(s)	1193
EcoRI	GAATTC	1 cut(s)	716
EcoRII	CCWGG	4 cut(s)	817, 1195, 1447, 1854
EcoRV	GATATC	1 cut(s)	976
EcoT14I	CCWWGG	3 cut(s)	423, 1986, 2007
EcoT22I	ATGCAT	1 cut(s)	859
EcoT38I	GRGCYC	1 cut(s)	1254
ErhI	CCWWGG	3 cut(s)	423, 1986, 2007
Esp3I	CGTCTC	1 cut(s)	1726
FaqI	GGGAC	3 cut(s)	1321, 1515, 1837
FauNDI	CATATG	2 cut(s)	10, 25
FbaI	TGATCA	2 cut(s)	3, 2218
FblI	GTMKAC	1 cut(s)	1812
Fnu4HI	GCNGC	8 cut(s)	250, 690, 755, 1168, 1171, 1176, 1704, 2297
FokI	GGATG	4 cut(s)	1250, 1698, 2149, 2263
FriOI	GRGCYC	1 cut(s)	1254
Fsp4HI	GCNGC	8 cut(s)	250, 690, 755, 1168, 1171, 1176, 1704, 2297
FspBI	CTAG	9 cut(s)	138, 594, 627, 768, 797, 936, 965, 1530, 1871
FspI	TGCGCA	1 cut(s)	326
GlaI	GCGC	3 cut(s)	326, 795, 1174
GluI	GCNGC	8 cut(s)	250, 690, 755, 1168, 1171, 1176, 1704, 2297
GsuI	CTGGAG	1 cut(s)	1868
HaeII	RGCGCY	1 cut(s)	797
HaeIII	GGCC	3 cut(s)	1160, 1304, 2319
HapII	CCGG	3 cut(s)	267, 730, 2070
HgaI	GACGC	2 cut(s)	225, 2036
HhaI	GCGC	3 cut(s)	327, 796, 1175
Hin6I	GCGC	3 cut(s)	325, 794, 1173
HinP1I	GCGC	3 cut(s)	325, 794, 1173
HincII	GTYRAC	1 cut(s)	1545
HindII	GTYRAC	1 cut(s)	1545
HindIII	AAGCTT	2 cut(s)	99, 654
HinfI	GANTC	7 cut(s)	761, 956, 1018, 1444, 1756, 1888, 1973
HpaII	CCGG	3 cut(s)	267, 730, 2070
HphI	GGTGA	3 cut(s)	26, 677, 1016
Hpy166II	GTNNAC	4 cut(s)	941, 1007, 1545, 1813
Hpy188I	TCNGA	8 cut(s)	67, 106, 192, 206, 1042, 1520, 1893, 2242
Hpy8I	GTNNAC	4 cut(s)	941, 1007, 1545, 1813
HpyAV	CCTTC	5 cut(s)	187, 286, 407, 615, 838
HpyCH4IV	ACGT	2 cut(s)	943, 2150
HpyF10VI	GCNNNNNNNGC	9 cut(s)	233, 695, 791, 868, 1181, 1310, 1640, 1784, 2036
HpyF3I	CTNAG	6 cut(s)	120, 167, 1039, 1361, 1589, 2111
HpySE526I	ACGT	2 cut(s)	943, 2150
HspAI	GCGC	3 cut(s)	325, 794, 1173
Ksp22I	TGATCA	2 cut(s)	3, 2218
Kzo9I	GATC	8 cut(s)	3, 16, 126, 473, 990, 1258, 1570, 2218
LmnI	GCTCC	7 cut(s)	134, 771, 1887, 2047, 2125, 2293, 2304
Lsp1109I	GCAGC	8 cut(s)	261, 676, 741, 1154, 1157, 1162, 1690, 2283
LweI	GCATC	2 cut(s)	523, 2026
MaeI	CTAG	9 cut(s)	138, 594, 627, 768, 797, 936, 965, 1530, 1871
MaeII	ACGT	2 cut(s)	943, 2150
MaeIII	GTNAC	8 cut(s)	310, 478, 599, 953, 1669, 2054, 2349, 2389
MalI	GATC	8 cut(s)	5, 18, 128, 475, 992, 1260, 1572, 2220
MboI	GATC	8 cut(s)	3, 16, 126, 473, 990, 1258, 1570, 2218
MboII	GAAGA	8 cut(s)	119, 124, 612, 951, 1388, 1533, 1928, 2096
MfeI	CAATTG	5 cut(s)	243, 736, 786, 1022, 2309
MflI	RGATCY	2 cut(s)	473, 1258
MhlI	GDGCHC	1 cut(s)	1254
MlsI	TGGCCA	3 cut(s)	1160, 1304, 2319
MluNI	TGGCCA	3 cut(s)	1160, 1304, 2319
MlyI	GAGTC	3 cut(s)	950, 1027, 1897
Mox20I	TGGCCA	3 cut(s)	1160, 1304, 2319
Mph1103I	ATGCAT	1 cut(s)	859
MroXI	GAANNNNTTC	1 cut(s)	259
MscI	TGGCCA	3 cut(s)	1160, 1304, 2319
MseI	TTAA	8 cut(s)	470, 726, 980, 1106, 1578, 2018, 2060, 2205
MslI	CAYNNNNRTG	4 cut(s)	147, 711, 951, 1643
Msp20I	TGGCCA	3 cut(s)	1160, 1304, 2319
MspA1I	CMGCKG	1 cut(s)	1167
MspCI	CTTAAG	1 cut(s)	1577
MspI	CCGG	3 cut(s)	267, 730, 2070
MspR9I	CCNGG	6 cut(s)	267, 731, 819, 1197, 1449, 1856
MunI	CAATTG	5 cut(s)	243, 736, 786, 1022, 2309
MvaI	CCWGG	4 cut(s)	819, 1197, 1449, 1856
MwoI	GCNNNNNNNGC	9 cut(s)	233, 695, 791, 868, 1181, 1310, 1640, 1784, 2036
NciI	CCSGG	2 cut(s)	267, 731
NcoI	CCATGG	1 cut(s)	423
NdeI	CATATG	2 cut(s)	10, 25
NdeII	GATC	8 cut(s)	3, 16, 126, 473, 990, 1258, 1570, 2218
NheI	GCTAGC	1 cut(s)	137
NlaIV	GGNNCC	3 cut(s)	1194, 2049, 2121
NmuCI	GTSAC	3 cut(s)	310, 953, 2054
NsbI	TGCGCA	1 cut(s)	326
NsiI	ATGCAT	1 cut(s)	859
NspI	RCATGY	3 cut(s)	64, 857, 1710
PagI	TCATGA	3 cut(s)	148, 1465, 2280
PciI	ACATGT	1 cut(s)	60
PcsI	WCGNNNNNNNCGW	1 cut(s)	351
PdmI	GAANNNNTTC	1 cut(s)	259
PfeI	GAWTC	4 cut(s)	761, 1444, 1756, 1973
PfoI	TCCNGGA	1 cut(s)	265
PkrI	GCNGC	8 cut(s)	251, 691, 756, 1169, 1172, 1177, 1705, 2298
PleI	GAGTC	3 cut(s)	950, 1026, 1896
PpsI	GAGTC	3 cut(s)	950, 1026, 1896
PpuMI	RGGWCCY	1 cut(s)	1193
PscI	ACATGT	1 cut(s)	60
PsiI	TTATAA	1 cut(s)	375
Psp124BI	GAGCTC	1 cut(s)	1254
Psp5II	RGGWCCY	1 cut(s)	1193
Psp6I	CCWGG	4 cut(s)	817, 1195, 1447, 1854
PspGI	CCWGG	4 cut(s)	817, 1195, 1447, 1854
PspN4I	GGNNCC	3 cut(s)	1194, 2049, 2121
PspPI	GGNCC	1 cut(s)	1193
PspPPI	RGGWCCY	1 cut(s)	1193
PsrI	GAACNNNNNNTAC	2 cut(s)	1640, 1672
PstI	CTGCAG	2 cut(s)	694, 1180
PstNI	CAGNNNCTG	2 cut(s)	233, 1170
PsuI	RGATCY	2 cut(s)	473, 1258
PvuII	CAGCTG	1 cut(s)	1167
RsaI	GTAC	4 cut(s)	395, 535, 1127, 2257
RsaNI	GTAC	4 cut(s)	394, 534, 1126, 2256
RseI	CAYNNNNRTG	4 cut(s)	147, 711, 951, 1643
SacI	GAGCTC	1 cut(s)	1254
SaqAI	TTAA	8 cut(s)	470, 726, 980, 1106, 1578, 2018, 2060, 2205
SatI	GCNGC	8 cut(s)	250, 690, 755, 1168, 1171, 1176, 1704, 2297
Sau3AI	GATC	8 cut(s)	3, 16, 126, 473, 990, 1258, 1570, 2218
Sau96I	GGNCC	1 cut(s)	1193
SchI	GAGTC	3 cut(s)	950, 1027, 1897
ScrFI	CCNGG	6 cut(s)	267, 731, 819, 1197, 1449, 1856
SduI	GDGCHC	1 cut(s)	1254
SfaNI	GCATC	2 cut(s)	523, 2026
SfcI	CTRYAG	3 cut(s)	642, 690, 1176
SinI	GGWCC	1 cut(s)	1193
SmiMI	CAYNNNNRTG	4 cut(s)	147, 711, 951, 1643
SmlI	CTYRAG	1 cut(s)	1577
SmoI	CTYRAG	1 cut(s)	1577
SsiI	CCGC	1 cut(s)	1763
SspI	AATATT	1 cut(s)	2199
SspMI	CTAG	9 cut(s)	138, 594, 627, 768, 797, 936, 965, 1530, 1871
SstI	GAGCTC	1 cut(s)	1254
StyD4I	CCNGG	6 cut(s)	265, 729, 817, 1195, 1447, 1854
StyI	CCWWGG	3 cut(s)	423, 1986, 2007
TaiI	ACGT	2 cut(s)	946, 2153
TaqI	TCGA	4 cut(s)	129, 218, 345, 2194
TatI	WGTACW	1 cut(s)	533
TfiI	GAWTC	4 cut(s)	761, 1444, 1756, 1973
Tru1I	TTAA	8 cut(s)	470, 726, 980, 1106, 1578, 2018, 2060, 2205
Tru9I	TTAA	8 cut(s)	470, 726, 980, 1106, 1578, 2018, 2060, 2205
TscAI	CASTG	5 cut(s)	699, 958, 1185, 1650, 2173
TseFI	GTSAC	3 cut(s)	310, 953, 2054
TseI	GCWGC	8 cut(s)	249, 689, 754, 1167, 1170, 1175, 1703, 2296
Tsp45I	GTSAC	3 cut(s)	310, 953, 2054
TspGWI	ACGGA	2 cut(s)	466, 1093
TspRI	CASTG	5 cut(s)	699, 958, 1185, 1650, 2173
Vha464I	CTTAAG	1 cut(s)	1577
VpaK11BI	GGWCC	1 cut(s)	1193
XapI	RAATTY	5 cut(s)	716, 722, 1385, 1459, 1874
XbaI	TCTAGA	2 cut(s)	593, 626
XceI	RCATGY	3 cut(s)	64, 857, 1710
XmiI	GTMKAC	1 cut(s)	1812
XmnI	GAANNNNTTC	1 cut(s)	259
XspI	CTAG	9 cut(s)	138, 594, 627, 768, 797, 936, 965, 1530, 1871
Zsp2I	ATGCAT	1 cut(s)	859

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.