Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0004927

Physical Location & Seq

Genomic Coordinates Forward (+)

24486036 .. 24490656

Gene Structure 4621 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1202200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1989 bp

ATGTCCGAGGAAGAGCAGCATACTATAAACACGATTGGGTTGGAGGTTTTCGCGCAGGAATTGGGTAAGATTCTCGCCCCAACTACCTACATCTTCTTTGCTTCAGCTCTTCCTGTTATAACATTTGGAGAGCAACTGAGCACAGAAACAGATGGAATTTTGTGCACGGTAGAAACTTTGGCCTCTACTGCTATTTGTGGTATAATACACTCGATTTTCGGTGGACAACCTCTCTTGATTTTAGGAGTTGCAGAACCCACTGTTATTATGTACAATTACATGTATGACTTTGCGAAAGGAAAGAAAGAATTGGGGCCTGAGCTGTTTTTGGCTTGGGTTGCATGGGTTTGGGTCTGGACGGCTCTTTTCCTCGTTCTTCTTGCAATATTCAATGCTTGTGATATCATCAACAGATTTACGAGGATTGCAGGCGAACTTTTTGGCATGTTGATTTCTGTTTTATTCATTCAAGAGGCCATCAAGGGTATGGTGAGTGAGTTCAAAATTCCCAAAGGCGAAGATCCAAAGTTGGAGACGTATCAATTTCAGTGGCTTTACACAAATGGACTGCTGGGGGTCATATTTAGTTTTGGACTCCTCTGTACTGCTTTGAAGAGCCGAAAGGCAAGGTCATGGTGGTATGCAACAGGGTGGTTCAGAAGTTTCATTGCAGATTATGGGGTTCCTTTAATGGTGTTAGTATGGACAGCACTATCATTTAGTGTTCCACACAATATTCCTCCAAGAGTTCCTAGAAGGCTCTATAGCCCTGTAGCTTGGGACTCTTCATCTTTACACCATTGGACCGTCATCAAGGATATGGGGAAGGTTTCTCCTGGATACATATTTGCTGCCATTATACCTGCTGTGATGGTAGCTGGACTTTACTTTTTTGACCATAGTGTCGCTTCACAGATGGCGCAACAACAAGAGTTCAATCTAAAGAAGCCTTCTGCGTATCATTATGATATCTTGTTGCTGGGATTTATGACTTTGCTTTGTGGATTGCTTGGGCTTCCTCCTTCTAACGGGGTCCTGCCACAGTCACCCATGCACACTAAGAGCCTTGCTGTTCTTAAGAAGCAGTTGATTCGAAGGAAAATGGTGAAGAGTGCTAAGGAATCAATAAAACAGAAAGCCAGCAACTCTGAAATCTACAGAAAAATGCAAGCAGTGTTCATAGAGATGGATAACTTGACTACACCTACTTCAGAAGTTAAAGAACTAAATGAATTGAAGGAGGCAGTTATGAAAAGCGAAAATAAAGAGGATGATGCAAAAAGTGCATTTGATCCTGAGAAGCACATTGATGCATGTTTGCCAGTAAGAGTTAATGAGCAAAGATTGAGCAATCTGTTGCAGTCGCTGCTTGTGGCAGCATCAGTTTTTGCTATGCCTGTCATCAAGAAGATACCGACATCAGTTTTGTGGGGATACTTTGCTTATATGGCCATTGACAGCCTTCCAGGGAACCAATTCTGGGAAAGGATGCTACTTCTCTTCATCTCCCCTAGCCGACAGTACAAGGTCTTGGAAGGGGGTCACGCTTCCTTTGTGGAGTCAGTGCCATTCAAATTCATAGCAATATTTACACTCTTTCAATTTGTTTACTTCCTGGTCTGTTTTGGTATTACATGGATCCCCATAGCCGGAATTTTGTTCCCCTTACCATTCTTCCTTCTCATATGGATAAGACAACATATTCTCCCCAAATTCTTCCAATCATATCACTTGCAAGAGCTGGACTCAGCTGAATGGGAGGAAGTCGTGGGCGCCCCAGTACGCTCTCTCAGTCTCAATTCTGGGAAATCGGAGCCTTCTAATGAAGAAGGTGAAATGGAGATGTGTGATGCTGAGATACTAGACGAATTAACAACCAGCAGAGGGGAGCTGAAGATCAGAGCGAGCTTCAGTGAAGATAGACGAACGAGCTTCAATGAAGATAGACACGGCCAGGTTCACCCTCAAAAATTAGGCCAAACAGGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006820 GO:0006855 GO:0006873 GO:0006885 GO:0007154 GO:0008150 GO:0008509 GO:0009605 GO:0009987 GO:0009991 GO:0010036 GO:0015075 GO:0015103 GO:0015238 GO:0015318 GO:0015562 GO:0015698 GO:0015893 GO:0016020 GO:0016021 GO:0019725 GO:0022857 GO:0030003 GO:0030004 GO:0030641 GO:0031224 GO:0031226 GO:0031667 GO:0031668 GO:0031669 GO:0034220 GO:0035445 GO:0042221 GO:0042493 GO:0042592 GO:0044425 GO:0044459 GO:0044464 GO:0046713 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051453 GO:0051716 GO:0055067 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0070887 GO:0071496 GO:0071944 GO:0080029 GO:0080139 GO:0098656 GO:0098660 GO:0098661 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HCO3_cotransp

Protein Analysis

663

Amino Acids

74.77

Weight (kDa)

6.2

Isoelectric Point (pI)

50.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HCO3_cotransp	PF00955	23 - 169	1.5e-31	HCO3- transporter integral membrane domain
HCO3_cotransp	PF00955	189 - 362	5.2e-25	HCO3- transporter integral membrane domain
HCO3_cotransp	PF00955	442 - 584	2e-29	HCO3- transporter integral membrane domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004927)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15460 AT1G15460 AT1G15460 AT1G15460 AT1G74810 AT1G74810 AT1G74810 AT1G74810 AT1G74810 AT1G74810 AT1G74810
fragaria_vesca	FvH4_6g30530 FvH4_6g30530
malus_domestica	MD09G1219100.v1.1 MD17G1202200.v1.1
prunus_persica	Prupe.3G077900_v2.0.a1 Prupe.3G077900_v2.0.a1
pyrus_communis	pycom17g20650
rosa_chinensis	RchiOBHm_Chr2g0136951
rosa_laevigata	RLG00000019590
rosa_multiflora	Rmu_sc0001374.1_g000070
rosa_roxburghii	Rroxscaffold_2G00107860
rosa_rugosa	Rorug02G0335500 Rorug02G0335500 Rorug02G0335500 Rorug02G0335600
rosa_samantha	Rh2AG385500 Rh2BG392500 Rh2CG372700
rosa_wichuraiana	Rw2G031530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	119
AasI	GACNNNNNNGTC	1 cut(s)	902
Acc36I	ACCTGC	1 cut(s)	871
AccB1I	GGYRCC	1 cut(s)	1772
AccII	CGCG	1 cut(s)	53
AclWI	GGATC	4 cut(s)	515, 1286, 1633, 1646
AcoI	YGGCCR	2 cut(s)	1449, 1951
AcsI	RAATTY	5 cut(s)	156, 504, 1574, 1653, 1712
AcuI	CTGAAG	4 cut(s)	87, 1194, 1894, 1913
AcyI	GRCGYC	1 cut(s)	1773
AfaI	GTAC	4 cut(s)	272, 604, 1523, 1782
AfiI	CCNNNNNNNGG	4 cut(s)	1028, 1480, 1649, 1884
AflII	CTTAAG	1 cut(s)	1076
AflIII	ACRYGT	1 cut(s)	279
AgsI	TTSAA	9 cut(s)	391, 470, 502, 613, 937, 1237, 1573, 1601, 1936
AjnI	CCWGG	4 cut(s)	835, 1465, 1614, 1953
AluBI	AGCT	9 cut(s)	107, 322, 776, 878, 1741, 1751, 1891, 1908, 1932
AluI	AGCT	9 cut(s)	107, 322, 776, 878, 1741, 1751, 1891, 1908, 1932
Alw21I	GWGCWC	2 cut(s)	143, 167
Alw26I	GTCTC	2 cut(s)	527, 1799
Alw44I	GTGCAC	1 cut(s)	163
AlwI	GGATC	4 cut(s)	515, 1286, 1633, 1646
AlwNI	CAGNNNCTG	1 cut(s)	1366
AoxI	GGCC	6 cut(s)	180, 314, 474, 1449, 1951, 1975
ApaLI	GTGCAC	1 cut(s)	163
ApeKI	GCWGC	4 cut(s)	16, 851, 1366, 1376
ApoI	RAATTY	5 cut(s)	156, 504, 1574, 1653, 1712
ArsI	GACNNNNNNTTYG	2 cut(s)	1408, 1440
Asp700I	GAANNNNTTC	1 cut(s)	1475
AspLEI	GCGC	3 cut(s)	55, 922, 1775
AspS9I	GGNCC	3 cut(s)	314, 804, 1033
AsuHPI	GGTGA	5 cut(s)	502, 1038, 1117, 1844, 1952
AsuII	TTCGAA	1 cut(s)	1093
AvaII	GGWCC	2 cut(s)	804, 1033
BaeGI	GKGCMC	1 cut(s)	167
BalI	TGGCCA	1 cut(s)	1451
BamHI	GGATCC	1 cut(s)	1638
BanI	GGYRCC	1 cut(s)	1772
Bbv12I	GWGCWC	2 cut(s)	143, 167
BbvI	GCAGC	4 cut(s)	28, 838, 1353, 1388
BccI	CCATC	5 cut(s)	146, 485, 865, 910, 1180
BceAI	ACGGC	2 cut(s)	375, 1966
BcgI	CGANNNNNNTGC	2 cut(s)	1073, 1107
BciT130I	CCWGG	4 cut(s)	837, 1467, 1616, 1955
BciVI	GTATCC	2 cut(s)	833, 1427
BcoDI	GTCTC	2 cut(s)	527, 1799
BfaI	CTAG	3 cut(s)	753, 1512, 1862
BfmI	CTRYAG	3 cut(s)	763, 771, 1156
BfoI	RGCGCY	1 cut(s)	1776
BfrI	CTTAAG	1 cut(s)	1076
BfuAI	ACCTGC	1 cut(s)	871
BfuI	GTATCC	2 cut(s)	833, 1427
BisI	GCNGC	4 cut(s)	17, 852, 1367, 1377
BlsI	GCNGC	4 cut(s)	18, 853, 1368, 1378
Bme1390I	CCNGG	4 cut(s)	837, 1467, 1616, 1955
Bme18I	GGWCC	2 cut(s)	804, 1033
BmgT120I	GGNCC	3 cut(s)	314, 804, 1033
BmiI	GGNNCC	7 cut(s)	315, 684, 1034, 1472, 1640, 1774, 1815
BmrFI	CCNGG	4 cut(s)	837, 1467, 1616, 1955
BmrI	ACTGGG	1 cut(s)	1772
BmsI	GCATC	5 cut(s)	1264, 1300, 1388, 1479, 1840
BmuI	ACTGGG	1 cut(s)	1772
BplI	GAGNNNNNCTC	2 cut(s)	1730, 1762
Bpu10I	CCTNAGC	2 cut(s)	318, 1116
Bpu14I	TTCGAA	1 cut(s)	1093
BsaHI	GRCGYC	1 cut(s)	1773
BsaJI	CCNNGG	2 cut(s)	6, 1466
BsaXI	ACNNNNNCTCC	2 cut(s)	1689, 1719
Bsc4I	CCNNNNNNNGG	4 cut(s)	1028, 1480, 1649, 1884
Bse1I	ACTGG	2 cut(s)	1322, 1778
Bse3DI	GCAATG	1 cut(s)	666
BseBI	CCWGG	4 cut(s)	837, 1467, 1616, 1955
BseDI	CCNNGG	2 cut(s)	6, 1466
BseGI	GGATG	2 cut(s)	1276, 1494
BseLI	CCNNNNNNNGG	4 cut(s)	1028, 1480, 1649, 1884
BseMI	GCAATG	1 cut(s)	666
BseMII	CTCAG	6 cut(s)	128, 309, 1287, 1761, 1804, 1845
BseNI	ACTGG	2 cut(s)	1322, 1778
BseRI	GAGGAG	1 cut(s)	587
BseSI	GKGCMC	1 cut(s)	167
BseXI	GCAGC	4 cut(s)	28, 838, 1353, 1388
BseYI	CCCAGC	2 cut(s)	571, 979
Bsh1236I	CGCG	1 cut(s)	53
BshFI	GGCC	6 cut(s)	182, 316, 476, 1451, 1953, 1977
BshNI	GGYRCC	1 cut(s)	1772
BsiHKAI	GWGCWC	2 cut(s)	143, 167
BsiSI	CCGG	1 cut(s)	1650
BslFI	GGGAC	1 cut(s)	794
BslI	CCNNNNNNNGG	4 cut(s)	1028, 1480, 1649, 1884
BsmAI	GTCTC	2 cut(s)	527, 1799
BsmBI	CGTCTC	1 cut(s)	527
BsmFI	GGGAC	1 cut(s)	794
BsnI	GGCC	6 cut(s)	182, 316, 476, 1451, 1953, 1977
Bsp119I	TTCGAA	1 cut(s)	1093
Bsp1286I	GDGCHC	2 cut(s)	143, 167
Bsp1407I	TGTACA	1 cut(s)	270
Bsp143I	GATC	4 cut(s)	520, 1291, 1638, 1896
BspANI	GGCC	6 cut(s)	182, 316, 476, 1451, 1953, 1977
BspCNI	CTCAG	6 cut(s)	129, 310, 1288, 1760, 1803, 1846
BspFNI	CGCG	1 cut(s)	53
BspLI	GGNNCC	7 cut(s)	315, 684, 1034, 1472, 1640, 1774, 1815
BspMI	ACCTGC	1 cut(s)	871
BspPI	GGATC	4 cut(s)	515, 1286, 1633, 1646
BspQI	GCTCTTC	3 cut(s)	6, 114, 608
BspT104I	TTCGAA	1 cut(s)	1093
BspT107I	GGYRCC	1 cut(s)	1772
BspTI	CTTAAG	1 cut(s)	1076
BsrDI	GCAATG	1 cut(s)	666
BsrGI	TGTACA	1 cut(s)	270
BsrI	ACTGG	2 cut(s)	1322, 1778
BssECI	CCNNGG	2 cut(s)	6, 1466
BssMI	GATC	4 cut(s)	520, 1291, 1638, 1896
BssNI	GRCGYC	1 cut(s)	1773
Bst2UI	CCWGG	4 cut(s)	837, 1467, 1616, 1955
Bst4CI	ACNGT	5 cut(s)	169, 262, 808, 1044, 1521
Bst6I	CTCTTC	6 cut(s)	6, 114, 608, 790, 1103, 1505
BstACI	GRCGYC	1 cut(s)	1773
BstAFI	CTTAAG	1 cut(s)	1076
BstAPI	GCANNNNNTGC	2 cut(s)	1283, 1366
BstAUI	TGTACA	1 cut(s)	270
BstBI	TTCGAA	1 cut(s)	1093
BstC8I	GCNNGC	4 cut(s)	430, 1141, 1170, 1906
BstDEI	CTNAG	8 cut(s)	137, 318, 1059, 1116, 1296, 1747, 1790, 1854
BstF5I	GGATG	2 cut(s)	1276, 1494
BstFNI	CGCG	1 cut(s)	53
BstH2I	RGCGCY	1 cut(s)	1776
BstHHI	GCGC	3 cut(s)	55, 922, 1775
BstKTI	GATC	4 cut(s)	523, 1294, 1641, 1899
BstMAI	GTCTC	2 cut(s)	527, 1799
BstMBI	GATC	4 cut(s)	520, 1291, 1638, 1896
BstMWI	GCNNNNNNNGC	5 cut(s)	188, 338, 1283, 1366, 1448
BstNI	CCWGG	4 cut(s)	837, 1467, 1616, 1955
BstNSI	RCATGY	3 cut(s)	283, 448, 1317
BstSCI	CCNGG	4 cut(s)	835, 1465, 1614, 1953
BstSFI	CTRYAG	3 cut(s)	763, 771, 1156
BstSLI	GKGCMC	1 cut(s)	167
BstUI	CGCG	1 cut(s)	53
BstV1I	GCAGC	4 cut(s)	28, 838, 1353, 1388
BstX2I	RGATCY	2 cut(s)	520, 1638
BstYI	RGATCY	2 cut(s)	520, 1638
BsuI	GTATCC	2 cut(s)	833, 1427
BsuRI	GGCC	6 cut(s)	182, 316, 476, 1451, 1953, 1977
BtsCI	GGATG	2 cut(s)	1276, 1494
BtsI	GCAGTG	1 cut(s)	1179
BtsIMutI	CAGTG	5 cut(s)	258, 554, 1179, 1569, 1918
BveI	ACCTGC	1 cut(s)	871
Cac8I	GCNNGC	4 cut(s)	430, 1141, 1170, 1906
CaiI	CAGNNNCTG	1 cut(s)	1366
CfoI	GCGC	3 cut(s)	55, 922, 1775
Cfr13I	GGNCC	3 cut(s)	314, 804, 1033
Csp6I	GTAC	4 cut(s)	271, 603, 1522, 1781
CspCI	CAANNNNNGTGG	2 cut(s)	530, 565
CviAII	CATG	7 cut(s)	280, 342, 445, 633, 1051, 1314, 1635
CviQI	GTAC	4 cut(s)	271, 603, 1522, 1781
DdeI	CTNAG	8 cut(s)	137, 318, 1059, 1116, 1296, 1747, 1790, 1854
DinI	GGCGCC	1 cut(s)	1774
DpnI	GATC	4 cut(s)	522, 1293, 1640, 1898
DpnII	GATC	4 cut(s)	520, 1291, 1638, 1896
DrdI	GACNNNNNNGTC	1 cut(s)	902
DseDI	GACNNNNNNGTC	1 cut(s)	902
EaeI	YGGCCR	2 cut(s)	1449, 1951
Eam1104I	CTCTTC	6 cut(s)	6, 114, 608, 790, 1103, 1505
EarI	CTCTTC	6 cut(s)	6, 114, 608, 790, 1103, 1505
Eco32I	GATATC	2 cut(s)	403, 970
Eco47I	GGWCC	2 cut(s)	804, 1033
Eco57I	CTGAAG	4 cut(s)	87, 1194, 1894, 1913
EcoO109I	RGGNCCY	2 cut(s)	314, 1033
EcoRII	CCWGG	4 cut(s)	835, 1465, 1614, 1953
EcoRV	GATATC	2 cut(s)	403, 970
EcoT22I	ATGCAT	1 cut(s)	1315
EgeI	GGCGCC	1 cut(s)	1774
EheI	GGCGCC	1 cut(s)	1774
Esp3I	CGTCTC	1 cut(s)	527
FaeI	CATG	7 cut(s)	283, 345, 448, 636, 1054, 1317, 1638
FaqI	GGGAC	1 cut(s)	794
FatI	CATG	7 cut(s)	279, 341, 444, 632, 1050, 1313, 1634
FauNDI	CATATG	1 cut(s)	1685
Fnu4HI	GCNGC	4 cut(s)	17, 852, 1367, 1377
FokI	GGATG	2 cut(s)	1283, 1501
Fsp4HI	GCNGC	4 cut(s)	17, 852, 1367, 1377
FspBI	CTAG	3 cut(s)	753, 1512, 1862
GlaI	GCGC	3 cut(s)	54, 921, 1774
GluI	GCNGC	4 cut(s)	17, 852, 1367, 1377
GsaI	CCCAGC	2 cut(s)	575, 983
HaeII	RGCGCY	1 cut(s)	1776
HaeIII	GGCC	6 cut(s)	182, 316, 476, 1451, 1953, 1977
HapII	CCGG	1 cut(s)	1650
HhaI	GCGC	3 cut(s)	55, 922, 1775
Hin1I	GRCGYC	1 cut(s)	1773
Hin1II	CATG	7 cut(s)	283, 345, 448, 636, 1054, 1317, 1638
Hin6I	GCGC	3 cut(s)	53, 920, 1773
HinP1I	GCGC	3 cut(s)	53, 920, 1773
HinfI	GANTC	7 cut(s)	70, 594, 782, 1090, 1121, 1559, 1745
HpaII	CCGG	1 cut(s)	1650
HphI	GGTGA	5 cut(s)	502, 1038, 1117, 1844, 1952
Hpy166II	GTNNAC	4 cut(s)	165, 224, 1609, 1960
Hpy188I	TCNGA	6 cut(s)	7, 659, 1150, 1213, 1813, 1901
Hpy188III	TCNNGA	5 cut(s)	235, 355, 470, 1295, 1405
Hpy8I	GTNNAC	4 cut(s)	165, 224, 1609, 1960
HpyCH4III	ACNGT	5 cut(s)	169, 262, 808, 1044, 1521
HpyCH4IV	ACGT	1 cut(s)	536
HpyF10VI	GCNNNNNNNGC	5 cut(s)	188, 338, 1283, 1366, 1448
HpyF3I	CTNAG	8 cut(s)	137, 318, 1059, 1116, 1296, 1747, 1790, 1854
HpySE526I	ACGT	1 cut(s)	536
Hsp92I	GRCGYC	1 cut(s)	1773
Hsp92II	CATG	7 cut(s)	283, 345, 448, 636, 1054, 1317, 1638
HspAI	GCGC	3 cut(s)	53, 920, 1773
KasI	GGCGCC	1 cut(s)	1772
Kzo9I	GATC	4 cut(s)	520, 1291, 1638, 1896
LguI	GCTCTTC	3 cut(s)	6, 114, 608
LmnI	GCTCC	2 cut(s)	1813, 1888
Lsp1109I	GCAGC	4 cut(s)	28, 838, 1353, 1388
LweI	GCATC	5 cut(s)	1264, 1300, 1388, 1479, 1840
MaeI	CTAG	3 cut(s)	753, 1512, 1862
MaeII	ACGT	1 cut(s)	536
MaeIII	GTNAC	2 cut(s)	1044, 1541
MalI	GATC	4 cut(s)	522, 1293, 1640, 1898
MboI	GATC	4 cut(s)	520, 1291, 1638, 1896
MflI	RGATCY	2 cut(s)	520, 1638
MhlI	GDGCHC	2 cut(s)	143, 167
MlsI	TGGCCA	1 cut(s)	1451
MluNI	TGGCCA	1 cut(s)	1451
Mly113I	GGCGCC	1 cut(s)	1773
MlyI	GAGTC	4 cut(s)	588, 776, 1568, 1739
MmeI	TCCRAC	2 cut(s)	21, 510
Mox20I	TGGCCA	1 cut(s)	1451
Mph1103I	ATGCAT	1 cut(s)	1315
MroXI	GAANNNNTTC	1 cut(s)	1475
MscI	TGGCCA	1 cut(s)	1451
MseI	TTAA	5 cut(s)	689, 1077, 1218, 1332, 1871
MslI	CAYNNNNRTG	2 cut(s)	1184, 1308
Msp20I	TGGCCA	1 cut(s)	1451
MspA1I	CMGCKG	1 cut(s)	1751
MspCI	CTTAAG	1 cut(s)	1076
MspI	CCGG	1 cut(s)	1650
MspR9I	CCNGG	4 cut(s)	837, 1467, 1616, 1955
MvaI	CCWGG	4 cut(s)	837, 1467, 1616, 1955
MvnI	CGCG	1 cut(s)	53
MwoI	GCNNNNNNNGC	5 cut(s)	188, 338, 1283, 1366, 1448
NarI	GGCGCC	1 cut(s)	1773
NdeI	CATATG	1 cut(s)	1685
NdeII	GATC	4 cut(s)	520, 1291, 1638, 1896
NlaIII	CATG	7 cut(s)	283, 345, 448, 636, 1054, 1317, 1638
NlaIV	GGNNCC	7 cut(s)	315, 684, 1034, 1472, 1640, 1774, 1815
NmuCI	GTSAC	2 cut(s)	1044, 1541
NsiI	ATGCAT	1 cut(s)	1315
NspI	RCATGY	3 cut(s)	283, 448, 1317
NspV	TTCGAA	1 cut(s)	1093
PciI	ACATGT	1 cut(s)	279
PciSI	GCTCTTC	3 cut(s)	6, 114, 608
PdmI	GAANNNNTTC	1 cut(s)	1475
PfeI	GAWTC	3 cut(s)	70, 1090, 1121
PfoI	TCCNGGA	1 cut(s)	835
PkrI	GCNGC	4 cut(s)	18, 853, 1368, 1378
PleI	GAGTC	4 cut(s)	588, 776, 1567, 1739
PluTI	GGCGCC	1 cut(s)	1776
PpsI	GAGTC	4 cut(s)	588, 776, 1567, 1739
PpuMI	RGGWCCY	1 cut(s)	1033
PscI	ACATGT	1 cut(s)	279
PsiI	TTATAA	1 cut(s)	119
Psp5II	RGGWCCY	1 cut(s)	1033
Psp6I	CCWGG	4 cut(s)	835, 1465, 1614, 1953
PspFI	CCCAGC	2 cut(s)	571, 979
PspGI	CCWGG	4 cut(s)	835, 1465, 1614, 1953
PspN4I	GGNNCC	7 cut(s)	315, 684, 1034, 1472, 1640, 1774, 1815
PspPI	GGNCC	3 cut(s)	314, 804, 1033
PspPPI	RGGWCCY	1 cut(s)	1033
PstNI	CAGNNNCTG	1 cut(s)	1366
PsuI	RGATCY	2 cut(s)	520, 1638
PvuII	CAGCTG	1 cut(s)	1751
RsaI	GTAC	4 cut(s)	272, 604, 1523, 1782
RsaNI	GTAC	4 cut(s)	271, 603, 1522, 1781
RseI	CAYNNNNRTG	2 cut(s)	1184, 1308
SapI	GCTCTTC	3 cut(s)	6, 114, 608
SaqAI	TTAA	5 cut(s)	689, 1077, 1218, 1332, 1871
SatI	GCNGC	4 cut(s)	17, 852, 1367, 1377
Sau3AI	GATC	4 cut(s)	520, 1291, 1638, 1896
Sau96I	GGNCC	3 cut(s)	314, 804, 1033
SchI	GAGTC	4 cut(s)	588, 776, 1568, 1739
ScrFI	CCNGG	4 cut(s)	837, 1467, 1616, 1955
SduI	GDGCHC	2 cut(s)	143, 167
SfaNI	GCATC	5 cut(s)	1264, 1300, 1388, 1479, 1840
SfcI	CTRYAG	3 cut(s)	763, 771, 1156
SfoI	GGCGCC	1 cut(s)	1774
SfuI	TTCGAA	1 cut(s)	1093
SinI	GGWCC	2 cut(s)	804, 1033
SmiMI	CAYNNNNRTG	2 cut(s)	1184, 1308
SmlI	CTYRAG	1 cut(s)	1076
SmoI	CTYRAG	1 cut(s)	1076
SspDI	GGCGCC	1 cut(s)	1772
SspI	AATATT	3 cut(s)	387, 736, 1587
SspMI	CTAG	3 cut(s)	753, 1512, 1862
StyD4I	CCNGG	4 cut(s)	835, 1465, 1614, 1953
TaaI	ACNGT	5 cut(s)	169, 262, 808, 1044, 1521
TaiI	ACGT	1 cut(s)	539
TaqI	TCGA	2 cut(s)	212, 1093
TatI	WGTACW	3 cut(s)	270, 602, 1521
TfiI	GAWTC	3 cut(s)	70, 1090, 1121
Tru1I	TTAA	5 cut(s)	689, 1077, 1218, 1332, 1871
Tru9I	TTAA	5 cut(s)	689, 1077, 1218, 1332, 1871
TscAI	CASTG	5 cut(s)	265, 554, 1179, 1569, 1918
TseFI	GTSAC	2 cut(s)	1044, 1541
TseI	GCWGC	4 cut(s)	16, 851, 1366, 1376
Tsp45I	GTSAC	2 cut(s)	1044, 1541
TspRI	CASTG	5 cut(s)	265, 554, 1179, 1569, 1918
Vha464I	CTTAAG	1 cut(s)	1076
VneI	GTGCAC	1 cut(s)	163
VpaK11BI	GGWCC	2 cut(s)	804, 1033
XapI	RAATTY	5 cut(s)	156, 504, 1574, 1653, 1712
XceI	RCATGY	3 cut(s)	283, 448, 1317
XcmI	CCANNNNNNNNNTGG	1 cut(s)	484
XmnI	GAANNNNTTC	1 cut(s)	1475
XspI	CTAG	3 cut(s)	753, 1512, 1862
Zsp2I	ATGCAT	1 cut(s)	1315

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.