Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0004927

Physical Location & Seq

Genomic Coordinates Forward (+)

31893830 .. 31898549

Gene Structure 4720 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00107860.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2082 bp

ATGGAGAGCATCAAAGCCCCATTCAGGGGTATTGCAAACGATATTCGAGGAAGAGCAGCATGCTACAAGAAAGATTGGATTGGAGGCATTCGTTCAGGAATCGGGATATTGGCCCCAACTACCTACATCTTCTTTGCTTCAGCTCTTCCTGTTATAGCATTTGGGGAGCAACTGAGTAGAGATACAGATGGAAGCTTGAGCACAGTTGAAACATTGGCTTCTACAGCTATCTGTGGCATAATACACTCCATTCTGGGTGGGCAACCTCTATTGATTTTGGGAGTTGCAGAACCGACTATTATAATGTACACGTACTTGTATGACTTTGCAAAAGGAAAGGAAGGTCTGGGACGCGAACTGTTTCTAGCTTGGGTTGGATGGGTTTGCGTCTGGACATCCCTTTTGCTCATTCTTCTGGCAATATTCAATGTCTGTGACATCATCAATAAGTTTACGAGGATTGCAGGGGAACTTTTTGGCATGTTGATAAATGTTCTGTTCATTCAGCAGGCTATCAAGGGAATAGTGAGTGAGTTCAAGCTACAGAAAGGTGAAGATCCAAATGGGGGGACTTATCAACGTGAGTCAATGTACACAAATGGACTGCTGGGGATCATATTTACTGTCGGTGTCCTCTATACTTCATTGAAGACCAGAAAAGCAAGATCATGGTGGTATGCAACAGGGTGGTTCAGAAGTTTCATTGCAGATTACGGGGTTCCTCTAATGGTAGTGTTGTGGACTGTTATATCATTCAGTGTACCACGCAATATTGTTCCCTCACAAGTTCCTAGAAGGCTATATAGCCCTCTAGCTTGGGATTCTGAATCTTTACACCATTGGTCTGTAATCAAGGCTATGGGGAAGGTTTCTCCTGGATACATCTTTGCGGCTTTCATTCCTGCTCTGATGGTAGCGGGTCTCTACTTTTTTGACCATAGTGTTGCTGCACAAATGGCACAACAAAAGGAGTTCAATCTAAAGAAACCTTCTGCATACCATTATGATATTTTGCTGCTGGGATTTTTGACACTGCTTTGTGGATTGATTGGGCTTCCTCCTTGTAATGGTGTCCTGCCACAGGCACCCATGCACACTAAGAGCCTTGCAGTTCTTAAGAGGCAGTTGATTCGAAAGGAAATGGTAAAGAGTGCTAAAGAAAGCATAAAACAGAAAGCTAGCAATTCTGAAATCTATGGAAATATGCAAGCTGTGTTCATAGAGATGGACAACTCGACTGCAGATACTTCAGTAGTTACAGAGCTTGAAGACTTGAAGGTGGCAGTTATGAAAAGTGAACATGAAGGGGAGAATGCAAAAGATGCATTCGATCCTGAGAAGCACATTGATGCTTTCCTGCCTGTCCGGGTTAACGAGCAAAGAGTAAGCAATCTGTTGCAGTCACTTCTTGTAGCAGCATCAGTTTTTGCTATGCCAGCCATCAAGAAGATACCAACATCAGTTTTGTGGGGATACTTTGCTTACATGGCCATTGACAGTCTTCCGGGGAATCAATTCTGGGAAAGGTTGCTATTTCTCTTCATTGCGCCTAGCCGACGTTACAAGGTCTTGGAAGGGGTTCATGCTTCCTTTATGGAGTCGGTGCCATTCAAATACATTGCCATATTTACACTCTTTCAGCTTGTCTACTTCCTGTTCTGCTTTGGTGTGACATGGATCCCCATAGCCGGCATTTTATTCCCCTTGCCGTTCTTCCTTCTCATAATGATAAGACAGCACTTCCTCCCCAAATTCTTTCAACCACATCACTTGCAGGAGCTCGATTCAGCTGAATGGGAGGAAGTCACTGGCCCCCCGAGACGGTCTCTCAGCATCTCTACAAGGGAATTGGAAACTACAATCGAAGAAGGTGAAGTGGAGATGTGTGATGCTGAGATATTAGACGAGTTAACAACCAGCAGAGGGGAGCTGAAAATCAGAGCTAGCTTCAGTGAAGACAAACGTGGTCAGGTAAAATATCAGAAGATACTTGAGGAATTCACCCTCAAAATTTTGGCCAAACAGAGTGAAAGAAGAGCTGAATTCAACAATATAGGTGACAGAAATATAGATGGGGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006820 GO:0006855 GO:0006873 GO:0006885 GO:0007154 GO:0008150 GO:0008509 GO:0009605 GO:0009987 GO:0009991 GO:0010036 GO:0015075 GO:0015103 GO:0015238 GO:0015318 GO:0015562 GO:0015698 GO:0015893 GO:0016020 GO:0016021 GO:0019725 GO:0022857 GO:0030003 GO:0030004 GO:0030641 GO:0031224 GO:0031226 GO:0031667 GO:0031668 GO:0031669 GO:0034220 GO:0035445 GO:0042221 GO:0042493 GO:0042592 GO:0044425 GO:0044459 GO:0044464 GO:0046713 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051453 GO:0051716 GO:0055067 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0070887 GO:0071496 GO:0071944 GO:0080029 GO:0080139 GO:0098656 GO:0098660 GO:0098661 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HCO3_cotransp

Protein Analysis

693

Amino Acids

77.96

Weight (kDa)

7.59

Isoelectric Point (pI)

43.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HCO3_cotransp	PF00955	7 - 183	5.2e-36	HCO3- transporter integral membrane domain
HCO3_cotransp	PF00955	200 - 375	2.5e-26	HCO3- transporter integral membrane domain
HCO3_cotransp	PF00955	455 - 597	3.9e-28	HCO3- transporter integral membrane domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004927)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15460 AT1G15460 AT1G15460 AT1G15460 AT1G74810 AT1G74810 AT1G74810 AT1G74810 AT1G74810 AT1G74810 AT1G74810
fragaria_vesca	FvH4_6g30530 FvH4_6g30530
malus_domestica	MD09G1219100.v1.1 MD17G1202200.v1.1
prunus_persica	Prupe.3G077900_v2.0.a1 Prupe.3G077900_v2.0.a1
pyrus_communis	pycom17g20650
rosa_chinensis	RchiOBHm_Chr2g0136951
rosa_laevigata	RLG00000019590
rosa_multiflora	Rmu_sc0001374.1_g000070
rosa_roxburghii	Rroxscaffold_2G00107860
rosa_rugosa	Rorug02G0335500 Rorug02G0335500 Rorug02G0335500 Rorug02G0335600
rosa_samantha	Rh2AG385500 Rh2BG392500 Rh2CG372700
rosa_wichuraiana	Rw2G031530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	302
AccB1I	GGYRCC	2 cut(s)	1084, 1603
AccI	GTMKAC	1 cut(s)	1647
AccII	CGCG	1 cut(s)	354
AciI	CCGC	2 cut(s)	890, 917
AclWI	GGATC	5 cut(s)	551, 620, 1325, 1672, 1685
AcoI	YGGCCR	2 cut(s)	1488, 2016
AcsI	RAATTY	4 cut(s)	1751, 1997, 2010, 2042
AcuI	CTGAAG	3 cut(s)	123, 1233, 1933
AfaI	GTAC	4 cut(s)	308, 314, 593, 762
AfiI	CCNNNNNNNGG	9 cut(s)	24, 25, 26, 566, 1067, 1081, 1688, 1821, 1923
AflII	CTTAAG	1 cut(s)	1115
AflIII	ACRYGT	1 cut(s)	309
AjnI	CCWGG	1 cut(s)	874
Alw21I	GWGCWC	2 cut(s)	203, 1782
Alw26I	GTCTC	3 cut(s)	926, 1813, 1830
AlwI	GGATC	5 cut(s)	551, 620, 1325, 1672, 1685
Ama87I	CYCGRG	1 cut(s)	1816
AoxI	GGCC	4 cut(s)	111, 1488, 1810, 2016
ApeKI	GCWGC	4 cut(s)	56, 947, 1015, 1415
ApoI	RAATTY	4 cut(s)	1751, 1997, 2010, 2042
ArsI	GACNNNNNNTTYG	2 cut(s)	385, 417
Asp700I	GAANNNNTTC	3 cut(s)	360, 1514, 1578
AspLEI	GCGC	1 cut(s)	1549
AspS9I	GGNCC	2 cut(s)	112, 1811
AsuC2I	CCSGG	2 cut(s)	1367, 1506
AsuHPI	GGTGA	4 cut(s)	563, 1883, 1993, 2069
AsuII	TTCGAA	1 cut(s)	1132
AsuNHI	GCTAGC	2 cut(s)	1178, 1943
AvaI	CYCGRG	1 cut(s)	1816
BaeI	ACNNNNGTAYC	2 cut(s)	1236, 1269
BalI	TGGCCA	2 cut(s)	1490, 2018
BamHI	GGATCC	1 cut(s)	1677
BanI	GGYRCC	2 cut(s)	1084, 1603
BanII	GRGCYC	1 cut(s)	1782
BbsI	GAAGAC	4 cut(s)	656, 1275, 1493, 1962
Bbv12I	GWGCWC	2 cut(s)	203, 1782
BbvI	GCAGC	4 cut(s)	68, 934, 1002, 1427
BccI	CCATC	6 cut(s)	182, 372, 904, 1219, 1448, 2066
BceAI	ACGGC	1 cut(s)	1693
BcgI	CGANNNNNNTGC	2 cut(s)	1112, 1146
BciT130I	CCWGG	1 cut(s)	876
BciVI	GTATCC	2 cut(s)	872, 1466
BcnI	CCSGG	2 cut(s)	1367, 1506
BcoDI	GTCTC	3 cut(s)	926, 1813, 1830
BfaI	CTAG	6 cut(s)	365, 792, 812, 1179, 1551, 1944
BfmI	CTRYAG	3 cut(s)	222, 542, 1239
BfrI	CTTAAG	1 cut(s)	1115
BfuI	GTATCC	2 cut(s)	872, 1466
BisI	GCNGC	5 cut(s)	57, 891, 948, 1016, 1416
BlsI	GCNGC	5 cut(s)	58, 892, 949, 1017, 1417
Bme1390I	CCNGG	3 cut(s)	876, 1367, 1506
BmeT110I	CYCGRG	1 cut(s)	1816
BmgT120I	GGNCC	2 cut(s)	112, 1811
BmiI	GGNNCC	6 cut(s)	114, 720, 1086, 1605, 1679, 1813
BmrFI	CCNGG	3 cut(s)	876, 1367, 1506
BmsI	GCATC	6 cut(s)	18, 1312, 1339, 1427, 1842, 1879
BmtI	GCTAGC	2 cut(s)	1182, 1947
BpiI	GAAGAC	4 cut(s)	656, 1275, 1493, 1962
BplI	GAGNNNNNCTC	2 cut(s)	1810, 1842
Bpu14I	TTCGAA	1 cut(s)	1132
BpuEI	CTTGAG	2 cut(s)	217, 2012
BpuMI	CCSGG	2 cut(s)	1367, 1506
BsaAI	YACGTR	1 cut(s)	312
BsaI	GGTCTC	2 cut(s)	926, 1830
BsaJI	CCNNGG	1 cut(s)	1505
Bsc4I	CCNNNNNNNGG	9 cut(s)	24, 25, 26, 566, 1067, 1081, 1688, 1821, 1923
Bse118I	RCCGGY	1 cut(s)	1688
Bse1I	ACTGG	1 cut(s)	1813
Bse3DI	GCAATG	3 cut(s)	702, 1542, 1617
BseBI	CCWGG	1 cut(s)	876
BseDI	CCNNGG	1 cut(s)	1505
BseGI	GGATG	2 cut(s)	383, 395
BseLI	CCNNNNNNNGG	9 cut(s)	24, 25, 26, 566, 1067, 1081, 1688, 1821, 1923
BseMI	GCAATG	3 cut(s)	702, 1542, 1617
BseMII	CTCAG	4 cut(s)	164, 1326, 1843, 1884
BseNI	ACTGG	1 cut(s)	1813
BseXI	GCAGC	4 cut(s)	68, 934, 1002, 1427
BseYI	CCCAGC	2 cut(s)	607, 1018
BsgI	GTGCAG	1 cut(s)	933
Bsh1236I	CGCG	1 cut(s)	354
BshFI	GGCC	4 cut(s)	113, 1490, 1812, 2018
BshNI	GGYRCC	2 cut(s)	1084, 1603
BsiHKAI	GWGCWC	2 cut(s)	203, 1782
BsiHKCI	CYCGRG	1 cut(s)	1816
BsiSI	CCGG	3 cut(s)	1366, 1505, 1689
BslFI	GGGAC	2 cut(s)	363, 583
BslI	CCNNNNNNNGG	9 cut(s)	24, 25, 26, 566, 1067, 1081, 1688, 1821, 1923
BsmAI	GTCTC	3 cut(s)	926, 1813, 1830
BsmBI	CGTCTC	1 cut(s)	1813
BsmFI	GGGAC	2 cut(s)	363, 583
BsmI	GAATGC	3 cut(s)	87, 1318, 1325
BsnI	GGCC	4 cut(s)	113, 1490, 1812, 2018
Bso31I	GGTCTC	2 cut(s)	926, 1830
BsoBI	CYCGRG	1 cut(s)	1816
Bsp119I	TTCGAA	1 cut(s)	1132
Bsp1286I	GDGCHC	2 cut(s)	203, 1782
Bsp1407I	TGTACA	2 cut(s)	306, 591
Bsp143I	GATC	5 cut(s)	556, 612, 665, 1330, 1677
BspACI	CCGC	2 cut(s)	890, 917
BspANI	GGCC	4 cut(s)	113, 1490, 1812, 2018
BspCNI	CTCAG	4 cut(s)	165, 1327, 1842, 1885
BspFNI	CGCG	1 cut(s)	354
BspLI	GGNNCC	6 cut(s)	114, 720, 1086, 1605, 1679, 1813
BspMAI	CTGCAG	1 cut(s)	1243
BspOI	GCTAGC	2 cut(s)	1182, 1947
BspPI	GGATC	5 cut(s)	551, 620, 1325, 1672, 1685
BspQI	GCTCTTC	3 cut(s)	46, 150, 2029
BspT104I	TTCGAA	1 cut(s)	1132
BspT107I	GGYRCC	2 cut(s)	1084, 1603
BspTI	CTTAAG	1 cut(s)	1115
BspTNI	GGTCTC	2 cut(s)	926, 1830
BsrDI	GCAATG	3 cut(s)	702, 1542, 1617
BsrFI	RCCGGY	1 cut(s)	1688
BsrGI	TGTACA	2 cut(s)	306, 591
BsrI	ACTGG	1 cut(s)	1813
BssAI	RCCGGY	1 cut(s)	1688
BssECI	CCNNGG	1 cut(s)	1505
BssMI	GATC	5 cut(s)	556, 612, 665, 1330, 1677
Bst2UI	CCWGG	1 cut(s)	876
Bst4CI	ACNGT	6 cut(s)	205, 360, 625, 745, 1499, 1824
Bst6I	CTCTTC	4 cut(s)	46, 150, 1544, 2029
BstAFI	CTTAAG	1 cut(s)	1115
BstAPI	GCANNNNNTGC	1 cut(s)	1322
BstAUI	TGTACA	2 cut(s)	306, 591
BstBAI	YACGTR	1 cut(s)	312
BstBI	TTCGAA	1 cut(s)	1132
BstC8I	GCNNGC	7 cut(s)	61, 510, 1180, 1209, 1437, 1690, 1945
BstDEI	CTNAG	5 cut(s)	173, 1098, 1335, 1829, 1893
BstENI	CCTNNNNNAGG	1 cut(s)	1079
BstF5I	GGATG	2 cut(s)	383, 395
BstFNI	CGCG	1 cut(s)	354
BstHHI	GCGC	1 cut(s)	1549
BstKTI	GATC	5 cut(s)	559, 615, 668, 1333, 1680
BstMAI	GTCTC	3 cut(s)	926, 1813, 1830
BstMBI	GATC	5 cut(s)	556, 612, 665, 1330, 1677
BstMWI	GCNNNNNNNGC	5 cut(s)	224, 956, 1322, 1436, 1487
BstNI	CCWGG	1 cut(s)	876
BstNSI	RCATGY	2 cut(s)	63, 484
BstSCI	CCNGG	3 cut(s)	874, 1365, 1504
BstSFI	CTRYAG	3 cut(s)	222, 542, 1239
BstUI	CGCG	1 cut(s)	354
BstV1I	GCAGC	4 cut(s)	68, 934, 1002, 1427
BstV2I	GAAGAC	4 cut(s)	656, 1275, 1493, 1962
BstX2I	RGATCY	2 cut(s)	556, 1677
BstYI	RGATCY	2 cut(s)	556, 1677
BsuI	GTATCC	2 cut(s)	872, 1466
BsuRI	GGCC	4 cut(s)	113, 1490, 1812, 2018
BtsCI	GGATG	2 cut(s)	383, 395
BtsI	GCAGTG	1 cut(s)	1031
BtsIMutI	CAGTG	4 cut(s)	763, 1031, 1806, 1957
Cac8I	GCNNGC	7 cut(s)	61, 510, 1180, 1209, 1437, 1690, 1945
CfoI	GCGC	1 cut(s)	1549
Cfr10I	RCCGGY	1 cut(s)	1688
Cfr13I	GGNCC	2 cut(s)	112, 1811
CseI	GACGC	2 cut(s)	360, 376
Csp6I	GTAC	4 cut(s)	307, 313, 592, 761
CspCI	CAANNNNNGTGG	2 cut(s)	1752, 1787
CviAII	CATG	8 cut(s)	60, 481, 669, 1090, 1301, 1486, 1583, 1674
CviQI	GTAC	4 cut(s)	307, 313, 592, 761
DdeI	CTNAG	5 cut(s)	173, 1098, 1335, 1829, 1893
DpnI	GATC	5 cut(s)	558, 614, 667, 1332, 1679
DpnII	GATC	5 cut(s)	556, 612, 665, 1330, 1677
EaeI	YGGCCR	2 cut(s)	1488, 2016
Eam1104I	CTCTTC	4 cut(s)	46, 150, 1544, 2029
EarI	CTCTTC	4 cut(s)	46, 150, 1544, 2029
Ecl136II	GAGCTC	1 cut(s)	1780
Eco24I	GRGCYC	1 cut(s)	1782
Eco31I	GGTCTC	2 cut(s)	926, 1830
Eco53kI	GAGCTC	1 cut(s)	1780
Eco57I	CTGAAG	3 cut(s)	123, 1233, 1933
Eco88I	CYCGRG	1 cut(s)	1816
EcoICRI	GAGCTC	1 cut(s)	1780
EcoNI	CCTNNNNNAGG	1 cut(s)	1079
EcoRI	GAATTC	2 cut(s)	1997, 2042
EcoRII	CCWGG	1 cut(s)	874
EcoT22I	ATGCAT	1 cut(s)	1327
EcoT38I	GRGCYC	1 cut(s)	1782
Esp3I	CGTCTC	1 cut(s)	1813
FaeI	CATG	8 cut(s)	63, 484, 672, 1093, 1304, 1489, 1586, 1677
FaqI	GGGAC	2 cut(s)	363, 583
FatI	CATG	8 cut(s)	59, 480, 668, 1089, 1300, 1485, 1582, 1673
FauI	CCCGC	1 cut(s)	910
FblI	GTMKAC	1 cut(s)	1647
Fnu4HI	GCNGC	5 cut(s)	57, 891, 948, 1016, 1416
FokI	GGATG	2 cut(s)	382, 390
FriOI	GRGCYC	1 cut(s)	1782
Fsp4HI	GCNGC	5 cut(s)	57, 891, 948, 1016, 1416
FspBI	CTAG	6 cut(s)	365, 792, 812, 1179, 1551, 1944
GlaI	GCGC	1 cut(s)	1548
GluI	GCNGC	5 cut(s)	57, 891, 948, 1016, 1416
GsaI	CCCAGC	2 cut(s)	611, 1022
HaeIII	GGCC	4 cut(s)	113, 1490, 1812, 2018
HapII	CCGG	3 cut(s)	1366, 1505, 1689
HgaI	GACGC	2 cut(s)	360, 376
HhaI	GCGC	1 cut(s)	1549
Hin1II	CATG	8 cut(s)	63, 484, 672, 1093, 1304, 1489, 1586, 1677
Hin6I	GCGC	1 cut(s)	1547
HinP1I	GCGC	1 cut(s)	1547
HincII	GTYRAC	2 cut(s)	1372, 1911
HindII	GTYRAC	2 cut(s)	1372, 1911
HindIII	AAGCTT	1 cut(s)	193
HinfI	GANTC	8 cut(s)	99, 584, 821, 827, 1129, 1510, 1598, 1784
HpaI	GTTAAC	2 cut(s)	1372, 1911
HpaII	CCGG	3 cut(s)	1366, 1505, 1689
HphI	GGTGA	4 cut(s)	563, 1883, 1993, 2069
Hpy166II	GTNNAC	9 cut(s)	309, 453, 594, 741, 761, 1298, 1372, 1648, 1911
Hpy188I	TCNGA	6 cut(s)	695, 826, 909, 1189, 1940, 1983
Hpy188III	TCNNGA	5 cut(s)	96, 103, 391, 1334, 1444
Hpy8I	GTNNAC	9 cut(s)	309, 453, 594, 741, 761, 1298, 1372, 1648, 1911
Hpy99I	CGWCG	1 cut(s)	1560
HpyAV	CCTTC	9 cut(s)	335, 789, 859, 999, 1270, 1298, 1568, 1727, 1862
HpyCH4III	ACNGT	6 cut(s)	205, 360, 625, 745, 1499, 1824
HpyCH4IV	ACGT	4 cut(s)	311, 580, 1558, 1963
HpyF10VI	GCNNNNNNNGC	5 cut(s)	224, 956, 1322, 1436, 1487
HpyF3I	CTNAG	5 cut(s)	173, 1098, 1335, 1829, 1893
HpySE526I	ACGT	4 cut(s)	311, 580, 1558, 1963
Hsp92II	CATG	8 cut(s)	63, 484, 672, 1093, 1304, 1489, 1586, 1677
HspAI	GCGC	1 cut(s)	1547
KroI	GCCGGC	1 cut(s)	1688
KroNI	GCCGGC	1 cut(s)	1690
KspAI	GTTAAC	2 cut(s)	1372, 1911
Kzo9I	GATC	5 cut(s)	556, 612, 665, 1330, 1677
LguI	GCTCTTC	3 cut(s)	46, 150, 2029
LmnI	GCTCC	3 cut(s)	166, 1777, 1927
Lsp1109I	GCAGC	4 cut(s)	68, 934, 1002, 1427
LweI	GCATC	6 cut(s)	18, 1312, 1339, 1427, 1842, 1879
MaeI	CTAG	6 cut(s)	365, 792, 812, 1179, 1551, 1944
MaeII	ACGT	4 cut(s)	311, 580, 1558, 1963
MaeIII	GTNAC	7 cut(s)	434, 1255, 1401, 1559, 1669, 1804, 2057
MalI	GATC	5 cut(s)	558, 614, 667, 1332, 1679
MboI	GATC	5 cut(s)	556, 612, 665, 1330, 1677
MflI	RGATCY	2 cut(s)	556, 1677
MhlI	GDGCHC	2 cut(s)	203, 1782
MlsI	TGGCCA	2 cut(s)	1490, 2018
MluCI	AATT	7 cut(s)	1183, 1514, 1751, 1847, 1997, 2010, 2042
MluNI	TGGCCA	2 cut(s)	1490, 2018
MlyI	GAGTC	2 cut(s)	593, 1607
MmeI	TCCRAC	1 cut(s)	355
Mox20I	TGGCCA	2 cut(s)	1490, 2018
Mph1103I	ATGCAT	1 cut(s)	1327
MroNI	GCCGGC	1 cut(s)	1688
MroXI	GAANNNNTTC	3 cut(s)	360, 1514, 1578
MscI	TGGCCA	2 cut(s)	1490, 2018
MseI	TTAA	3 cut(s)	1116, 1371, 1910
MslI	CAYNNNNRTG	2 cut(s)	1223, 1347
Msp20I	TGGCCA	2 cut(s)	1490, 2018
MspA1I	CMGCKG	1 cut(s)	1790
MspCI	CTTAAG	1 cut(s)	1115
MspI	CCGG	3 cut(s)	1366, 1505, 1689
MspR9I	CCNGG	3 cut(s)	876, 1367, 1506
Mva1269I	GAATGC	3 cut(s)	87, 1318, 1325
MvaI	CCWGG	1 cut(s)	876
MvnI	CGCG	1 cut(s)	354
MwoI	GCNNNNNNNGC	5 cut(s)	224, 956, 1322, 1436, 1487
NaeI	GCCGGC	1 cut(s)	1690
NciI	CCSGG	2 cut(s)	1367, 1506
NdeII	GATC	5 cut(s)	556, 612, 665, 1330, 1677
NgoMIV	GCCGGC	1 cut(s)	1688
NheI	GCTAGC	2 cut(s)	1178, 1943
NlaIII	CATG	8 cut(s)	63, 484, 672, 1093, 1304, 1489, 1586, 1677
NlaIV	GGNNCC	6 cut(s)	114, 720, 1086, 1605, 1679, 1813
NmuCI	GTSAC	5 cut(s)	434, 1401, 1669, 1804, 2057
NsiI	ATGCAT	1 cut(s)	1327
NspI	RCATGY	2 cut(s)	63, 484
NspV	TTCGAA	1 cut(s)	1132
PaeI	GCATGC	1 cut(s)	63
PciSI	GCTCTTC	3 cut(s)	46, 150, 2029
PctI	GAATGC	3 cut(s)	87, 1318, 1325
PdiI	GCCGGC	1 cut(s)	1690
PdmI	GAANNNNTTC	3 cut(s)	360, 1514, 1578
PfeI	GAWTC	6 cut(s)	99, 821, 827, 1129, 1510, 1784
PfoI	TCCNGGA	1 cut(s)	874
PkrI	GCNGC	5 cut(s)	58, 892, 949, 1017, 1417
PleI	GAGTC	2 cut(s)	592, 1606
PpsI	GAGTC	2 cut(s)	592, 1606
Ppu21I	YACGTR	1 cut(s)	312
PsiI	TTATAA	1 cut(s)	302
Psp124BI	GAGCTC	1 cut(s)	1782
Psp6I	CCWGG	1 cut(s)	874
PspFI	CCCAGC	2 cut(s)	607, 1018
PspGI	CCWGG	1 cut(s)	874
PspN4I	GGNNCC	6 cut(s)	114, 720, 1086, 1605, 1679, 1813
PspPI	GGNCC	2 cut(s)	112, 1811
PstI	CTGCAG	1 cut(s)	1243
PsuI	RGATCY	2 cut(s)	556, 1677
PvuII	CAGCTG	1 cut(s)	1790
RsaI	GTAC	4 cut(s)	308, 314, 593, 762
RsaNI	GTAC	4 cut(s)	307, 313, 592, 761
RseI	CAYNNNNRTG	2 cut(s)	1223, 1347
SacI	GAGCTC	1 cut(s)	1782
SapI	GCTCTTC	3 cut(s)	46, 150, 2029
SaqAI	TTAA	3 cut(s)	1116, 1371, 1910
SatI	GCNGC	5 cut(s)	57, 891, 948, 1016, 1416
Sau3AI	GATC	5 cut(s)	556, 612, 665, 1330, 1677
Sau96I	GGNCC	2 cut(s)	112, 1811
SchI	GAGTC	2 cut(s)	593, 1607
ScrFI	CCNGG	3 cut(s)	876, 1367, 1506
SduI	GDGCHC	2 cut(s)	203, 1782
SfaNI	GCATC	6 cut(s)	18, 1312, 1339, 1427, 1842, 1879
SfcI	CTRYAG	3 cut(s)	222, 542, 1239
SfuI	TTCGAA	1 cut(s)	1132
SmiMI	CAYNNNNRTG	2 cut(s)	1223, 1347
SmlI	CTYRAG	3 cut(s)	196, 1115, 1991
SmoI	CTYRAG	3 cut(s)	196, 1115, 1991
SphI	GCATGC	1 cut(s)	63
Sse9I	AATT	7 cut(s)	1183, 1514, 1751, 1847, 1997, 2010, 2042
SsiI	CCGC	2 cut(s)	890, 917
SspI	AATATT	2 cut(s)	423, 772
SspMI	CTAG	6 cut(s)	365, 792, 812, 1179, 1551, 1944
SstI	GAGCTC	1 cut(s)	1782
StyD4I	CCNGG	3 cut(s)	874, 1365, 1504
TaaI	ACNGT	6 cut(s)	205, 360, 625, 745, 1499, 1824
TaiI	ACGT	4 cut(s)	314, 583, 1561, 1966
TaqI	TCGA	6 cut(s)	46, 1132, 1235, 1329, 1782, 1863
TasI	AATT	7 cut(s)	1183, 1514, 1751, 1847, 1997, 2010, 2042
TatI	WGTACW	2 cut(s)	306, 591
TauI	GCSGC	1 cut(s)	893
TfiI	GAWTC	6 cut(s)	99, 821, 827, 1129, 1510, 1784
Tru1I	TTAA	3 cut(s)	1116, 1371, 1910
Tru9I	TTAA	3 cut(s)	1116, 1371, 1910
TscAI	CASTG	4 cut(s)	763, 1038, 1813, 1957
TseFI	GTSAC	5 cut(s)	434, 1401, 1669, 1804, 2057
TseI	GCWGC	4 cut(s)	56, 947, 1015, 1415
Tsp45I	GTSAC	5 cut(s)	434, 1401, 1669, 1804, 2057
TspDTI	ATGAA	9 cut(s)	490, 633, 691, 886, 1207, 1304, 1317, 1531, 1571
TspRI	CASTG	4 cut(s)	763, 1038, 1813, 1957
Vha464I	CTTAAG	1 cut(s)	1115
XagI	CCTNNNNNAGG	1 cut(s)	1079
XapI	RAATTY	4 cut(s)	1751, 1997, 2010, 2042
XceI	RCATGY	2 cut(s)	63, 484
XmiI	GTMKAC	1 cut(s)	1647
XmnI	GAANNNNTTC	3 cut(s)	360, 1514, 1578
XspI	CTAG	6 cut(s)	365, 792, 812, 1179, 1551, 1944
Zsp2I	ATGCAT	1 cut(s)	1327

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.