Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001374.1

Orthogroup ID

OG0004927

Physical Location & Seq

Genomic Coordinates Forward (+)

235985 .. 241691

Gene Structure 5707 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001374.1_g000070.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2349 bp

atggagagcttcaaagccccattcaggggtattgcaagcgatattcgaggaagagcagcatgctacaagaaagattggattggaggcattcgttcaggaatcgggatattggccccgactacctacatcttctttgcttcagctcttcctgttatagcatttggggagcaactgagtagagatacagatggaagcttgagcacagttgaaacattggcttctacagctatctgtggcataatacactccattctgggtggccaacctctattgattttgggagttgcagaaccgactattataatgtacacgtacttgtatgactttgcaaaaggaaaggaaggtctgggacgcgaactgtttctagcttgggttggatgggtttgcgtctggacatcccttttgctcattcttctggcaatattcaatgtttgtgacatcatcaataagtttacgaggattgcaggggaactttttggcatgttgataaatgttctgttcattcagcaggctatcaagggaatagtgagtgagttcaagctacagaaagttgaagatccaaatgggggggcttatcaacgtgagtcaatgtacacaaatggacttctgggggtcatatttactgttggtgtcctctatacttcattgaagaccagaaaagcaagatcatggtggtatgcaacagggtggttcagaagtttcattgcagattacggggttcctctaatggtagtgttgtggactgttatatcattcagtgtaccacacaatattgttccctcacaagttcctagaaggctgtatagccctctagcttgggattctgaatctttacaccattggtctgtaatcaaggatatggggaaggtttctcctggatacatctttgctgctttcattcctgctctgatggtagcgggtctctacttttttgaccacagtgttgcttcacaaatggcacaacaaaaggagttcaatctaaagaaaccttctgcataccattatgatattttgctgctgggatttttgacactgctttgtggattgattgggcttcctccttgtaatggtgtcctgccacaggcacccatgcacactaagagccttgcagttcttaagaggcagttgattcgaaaggaaatggtaaagagtgctaaagaaagcataaaacagaaagctagcaattctgaaatctatggaaatatgcaagctgtattcatagagatggacaattcgactgcagatacttcagtagttacagagcttgaagacttgaaggaggcagttatgaaaagtgaacatgaaggggagaatgcaaaagatgcatttgatcctgagaagcacattgatgctttcctgcctgtccgggttaacgagcaaagagtaagcaatctgttgcagtcacttcttgtagcagcatcagtttttgctatgccagccatcaagaagataccaacatcagttttgtggggatactttgcttacatggccattgacagtcttccggggaatcaattctgggaaaggttgctatttctcttcattgcgcctagccgacgttacaaggtcttggaaggggttcatgcttcctttatggagtcagtgccattcaaatacattgccatatttacactctttcagcttgtatacttcctgttctgctttggtgtgacatggatccccatagccggcattttattccccttgccgttcttccttctcataatgataagacagcacttcctccccaaattctttcaaccatatcacttgcaggagctggattcagctgaatgggaggaagtcactggccccccgagacggtctctcagcgtctctacaagggaattggaaactacaatcgaagaaggtgaagtggagatgtgtgatgctgagatattagatgagttgacaaccagcagaggggagctgaaaatcagagctagcttcagtgaagacaaacgtggtcagcgcccgcaagccctgcttgccttctgccctagcgcgggctcacctgccctcgcgacactttgtccacgcgaccttgtgacacatagacctcgcgagcaagaattgcatctactgcccccgcagccccacgctcgttcgctgctcccagcgagcttgccctgcatctgctgtcctcgtagcccaacgctcgctcgttgcccaacgctcgctcgttgcctccccaagatcctcgcggccacgcgacatctttgcaacatcctcgctgccccacggcatgctcccgaccccgcggcttcacaaatccaaggctcggcagcccctccacctcgcaacttcaagaccacactggaatcctacaagtctgctccattgcactag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006820 GO:0006855 GO:0006873 GO:0006885 GO:0007154 GO:0008150 GO:0008509 GO:0009605 GO:0009987 GO:0009991 GO:0010036 GO:0015075 GO:0015103 GO:0015238 GO:0015318 GO:0015562 GO:0015698 GO:0015893 GO:0016020 GO:0016021 GO:0019725 GO:0022857 GO:0030003 GO:0030004 GO:0030641 GO:0031224 GO:0031226 GO:0031667 GO:0031668 GO:0031669 GO:0034220 GO:0035445 GO:0042221 GO:0042493 GO:0042592 GO:0044425 GO:0044459 GO:0044464 GO:0046713 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051453 GO:0051716 GO:0055067 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0070887 GO:0071496 GO:0071944 GO:0080029 GO:0080139 GO:0098656 GO:0098660 GO:0098661 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HCO3_cotransp

Protein Analysis

782

Amino Acids

87.22

Weight (kDa)

8.44

Isoelectric Point (pI)

46.47

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004927)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15460 AT1G15460 AT1G15460 AT1G15460 AT1G74810 AT1G74810 AT1G74810 AT1G74810 AT1G74810 AT1G74810 AT1G74810
fragaria_vesca	FvH4_6g30530 FvH4_6g30530
malus_domestica	MD09G1219100.v1.1 MD17G1202200.v1.1
prunus_persica	Prupe.3G077900_v2.0.a1 Prupe.3G077900_v2.0.a1
pyrus_communis	pycom17g20650
rosa_chinensis	RchiOBHm_Chr2g0136951
rosa_laevigata	RLG00000019590
rosa_multiflora	Rmu_sc0001374.1_g000070
rosa_roxburghii	Rroxscaffold_2G00107860
rosa_rugosa	Rorug02G0335500 Rorug02G0335500 Rorug02G0335500 Rorug02G0335600
rosa_samantha	Rh2AG385500 Rh2BG392500 Rh2CG372700
rosa_wichuraiana	Rw2G031530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	302
AarI	CACCTGC	1 cut(s)	2023
Acc36I	ACCTGC	1 cut(s)	2023
AccB1I	GGYRCC	1 cut(s)	1084
AccI	GTMKAC	1 cut(s)	1647
AccII	CGCG	8 cut(s)	354, 2006, 2024, 2040, 2064, 2204, 2212, 2261
AciI	CCGC	7 cut(s)	917, 1976, 2006, 2090, 2204, 2259, 2261
AclWI	GGATC	5 cut(s)	551, 1325, 1672, 1685, 2191
AcoI	YGGCCR	3 cut(s)	259, 1488, 2205
AcsI	RAATTY	1 cut(s)	1751
AcuI	CTGAAG	3 cut(s)	123, 1233, 1933
AfaI	GTAC	4 cut(s)	308, 314, 593, 762
AflII	CTTAAG	1 cut(s)	1115
AflIII	ACRYGT	1 cut(s)	309
AhdI	GACNNNNNGTC	1 cut(s)	2031
AjnI	CCWGG	1 cut(s)	874
Alw21I	GWGCWC	1 cut(s)	203
Alw26I	GTCTC	4 cut(s)	926, 1813, 1830, 1840
AlwI	GGATC	5 cut(s)	551, 1325, 1672, 1685, 2191
AlwNI	CAGNNNCTG	1 cut(s)	1780
Ama87I	CYCGRG	1 cut(s)	1816
AoxI	GGCC	5 cut(s)	111, 259, 1488, 1810, 2205
ApeKI	GCWGC	8 cut(s)	56, 890, 1015, 1415, 2092, 2110, 2234, 2285
ApoI	RAATTY	1 cut(s)	1751
ArsI	GACNNNNNNTTYG	2 cut(s)	385, 417
Asp700I	GAANNNNTTC	3 cut(s)	360, 1514, 1578
AspLEI	GCGC	3 cut(s)	1549, 1974, 2006
AspS9I	GGNCC	2 cut(s)	112, 1811
AsuC2I	CCSGG	2 cut(s)	1367, 1506
AsuHPI	GGTGA	2 cut(s)	1883, 2004
AsuII	TTCGAA	1 cut(s)	1132
AsuNHI	GCTAGC	2 cut(s)	1178, 1943
AvaI	CYCGRG	1 cut(s)	1816
BaeI	ACNNNNGTAYC	2 cut(s)	1236, 1269
BalI	TGGCCA	2 cut(s)	261, 1490
BamHI	GGATCC	1 cut(s)	1677
BanI	GGYRCC	1 cut(s)	1084
BanII	GRGCYC	1 cut(s)	2012
BbsI	GAAGAC	4 cut(s)	656, 1275, 1493, 1962
Bbv12I	GWGCWC	1 cut(s)	203
BbvI	GCAGC	8 cut(s)	68, 877, 1002, 1427, 2097, 2104, 2221, 2297
BccI	CCATC	5 cut(s)	182, 372, 904, 1219, 1448
BceAI	ACGGC	2 cut(s)	1693, 2258
BcgI	CGANNNNNNTGC	6 cut(s)	1112, 1146, 2202, 2212, 2236, 2246
BciT130I	CCWGG	1 cut(s)	876
BciVI	GTATCC	2 cut(s)	872, 1466
BcnI	CCSGG	2 cut(s)	1367, 1506
BcoDI	GTCTC	4 cut(s)	926, 1813, 1830, 1840
BfaI	CTAG	8 cut(s)	365, 792, 812, 1179, 1551, 1944, 2001, 2347
BfmI	CTRYAG	3 cut(s)	222, 542, 1239
BfoI	RGCGCY	1 cut(s)	1975
BfrI	CTTAAG	1 cut(s)	1115
BfuAI	ACCTGC	1 cut(s)	2023
BfuI	GTATCC	2 cut(s)	872, 1466
Bme1390I	CCNGG	3 cut(s)	876, 1367, 1506
BmeRI	GACNNNNNGTC	1 cut(s)	2031
BmeT110I	CYCGRG	1 cut(s)	1816
BmgT120I	GGNCC	2 cut(s)	112, 1811
BmiI	GGNNCC	5 cut(s)	114, 720, 1086, 1679, 1813
BmrFI	CCNGG	3 cut(s)	876, 1367, 1506
BmsI	GCATC	6 cut(s)	1312, 1339, 1427, 1879, 2086, 2142
BmtI	GCTAGC	2 cut(s)	1182, 1947
BpiI	GAAGAC	4 cut(s)	656, 1275, 1493, 1962
BplI	GAGNNNNNCTC	2 cut(s)	1810, 1842
Bpu14I	TTCGAA	1 cut(s)	1132
BpuEI	CTTGAG	1 cut(s)	217
BpuMI	CCSGG	2 cut(s)	1367, 1506
BsaAI	YACGTR	1 cut(s)	312
BsaI	GGTCTC	2 cut(s)	926, 1830
BsaJI	CCNNGG	4 cut(s)	1505, 2240, 2259, 2275
Bse118I	RCCGGY	1 cut(s)	1688
Bse1I	ACTGG	2 cut(s)	1813, 2322
Bse3DI	GCAATG	4 cut(s)	702, 1542, 1617, 2339
BseBI	CCWGG	1 cut(s)	876
BseDI	CCNNGG	4 cut(s)	1505, 2240, 2259, 2275
BseGI	GGATG	3 cut(s)	383, 395, 2226
BseMI	GCAATG	4 cut(s)	702, 1542, 1617, 2339
BseMII	CTCAG	4 cut(s)	164, 1326, 1843, 1884
BseNI	ACTGG	2 cut(s)	1813, 2322
BseXI	GCAGC	8 cut(s)	68, 877, 1002, 1427, 2097, 2104, 2221, 2297
BseYI	CCCAGC	2 cut(s)	1018, 2116
Bsh1236I	CGCG	8 cut(s)	354, 2006, 2024, 2040, 2064, 2204, 2212, 2261
BshFI	GGCC	5 cut(s)	113, 261, 1490, 1812, 2207
BshNI	GGYRCC	1 cut(s)	1084
BsiHKAI	GWGCWC	1 cut(s)	203
BsiHKCI	CYCGRG	1 cut(s)	1816
BsiSI	CCGG	3 cut(s)	1366, 1505, 1689
BslFI	GGGAC	1 cut(s)	363
BsmAI	GTCTC	4 cut(s)	926, 1813, 1830, 1840
BsmBI	CGTCTC	2 cut(s)	1813, 1840
BsmFI	GGGAC	1 cut(s)	363
BsmI	GAATGC	2 cut(s)	87, 1318
BsnI	GGCC	5 cut(s)	113, 261, 1490, 1812, 2207
Bso31I	GGTCTC	2 cut(s)	926, 1830
BsoBI	CYCGRG	1 cut(s)	1816
Bsp119I	TTCGAA	1 cut(s)	1132
Bsp1286I	GDGCHC	2 cut(s)	203, 2012
Bsp1407I	TGTACA	2 cut(s)	306, 591
Bsp143I	GATC	5 cut(s)	556, 665, 1330, 1677, 2196
Bsp68I	TCGCGA	2 cut(s)	2024, 2064
BspACI	CCGC	7 cut(s)	917, 1976, 2006, 2090, 2204, 2259, 2261
BspANI	GGCC	5 cut(s)	113, 261, 1490, 1812, 2207
BspCNI	CTCAG	4 cut(s)	165, 1327, 1842, 1885
BspFNI	CGCG	8 cut(s)	354, 2006, 2024, 2040, 2064, 2204, 2212, 2261
BspLI	GGNNCC	5 cut(s)	114, 720, 1086, 1679, 1813
BspMAI	CTGCAG	1 cut(s)	1243
BspMI	ACCTGC	1 cut(s)	2023
BspOI	GCTAGC	2 cut(s)	1182, 1947
BspPI	GGATC	5 cut(s)	551, 1325, 1672, 1685, 2191
BspQI	GCTCTTC	2 cut(s)	46, 150
BspT104I	TTCGAA	1 cut(s)	1132
BspT107I	GGYRCC	1 cut(s)	1084
BspTI	CTTAAG	1 cut(s)	1115
BspTNI	GGTCTC	2 cut(s)	926, 1830
BsrDI	GCAATG	4 cut(s)	702, 1542, 1617, 2339
BsrFI	RCCGGY	1 cut(s)	1688
BsrGI	TGTACA	2 cut(s)	306, 591
BsrI	ACTGG	2 cut(s)	1813, 2322
BssAI	RCCGGY	1 cut(s)	1688
BssECI	CCNNGG	4 cut(s)	1505, 2240, 2259, 2275
BssMI	GATC	5 cut(s)	556, 665, 1330, 1677, 2196
BssNAI	GTATAC	1 cut(s)	1648
BssT1I	CCWWGG	1 cut(s)	2275
Bst1107I	GTATAC	1 cut(s)	1648
Bst2UI	CCWGG	1 cut(s)	876
Bst4CI	ACNGT	7 cut(s)	205, 360, 625, 745, 941, 1499, 1824
Bst6I	CTCTTC	3 cut(s)	46, 150, 1544
BstAFI	CTTAAG	1 cut(s)	1115
BstAPI	GCANNNNNTGC	4 cut(s)	1322, 1984, 2074, 2083
BstAUI	TGTACA	2 cut(s)	306, 591
BstBAI	YACGTR	1 cut(s)	312
BstBI	TTCGAA	1 cut(s)	1132
BstDEI	CTNAG	5 cut(s)	173, 1098, 1335, 1829, 1893
BstDSI	CCRYGG	2 cut(s)	2240, 2259
BstENI	CCTNNNNNAGG	1 cut(s)	1079
BstF5I	GGATG	3 cut(s)	383, 395, 2226
BstFNI	CGCG	8 cut(s)	354, 2006, 2024, 2040, 2064, 2204, 2212, 2261
BstH2I	RGCGCY	1 cut(s)	1975
BstHHI	GCGC	3 cut(s)	1549, 1974, 2006
BstKTI	GATC	5 cut(s)	559, 668, 1333, 1680, 2199
BstMAI	GTCTC	4 cut(s)	926, 1813, 1830, 1840
BstMBI	GATC	5 cut(s)	556, 665, 1330, 1677, 2196
BstNI	CCWGG	1 cut(s)	876
BstNSI	RCATGY	3 cut(s)	63, 484, 2249
BstSCI	CCNGG	3 cut(s)	874, 1365, 1504
BstSFI	CTRYAG	3 cut(s)	222, 542, 1239
BstUI	CGCG	8 cut(s)	354, 2006, 2024, 2040, 2064, 2204, 2212, 2261
BstV1I	GCAGC	8 cut(s)	68, 877, 1002, 1427, 2097, 2104, 2221, 2297
BstV2I	GAAGAC	4 cut(s)	656, 1275, 1493, 1962
BstX2I	RGATCY	3 cut(s)	556, 1677, 2196
BstYI	RGATCY	3 cut(s)	556, 1677, 2196
BstZ17I	GTATAC	1 cut(s)	1648
BsuI	GTATCC	2 cut(s)	872, 1466
BsuRI	GGCC	5 cut(s)	113, 261, 1490, 1812, 2207
BtgI	CCRYGG	2 cut(s)	2240, 2259
BtsCI	GGATG	3 cut(s)	383, 395, 2226
BtsI	GCAGTG	1 cut(s)	1031
BtsIMutI	CAGTG	7 cut(s)	763, 946, 1031, 1608, 1806, 1957, 2315
BtuMI	TCGCGA	2 cut(s)	2024, 2064
BveI	ACCTGC	1 cut(s)	2023
CaiI	CAGNNNCTG	1 cut(s)	1780
CfoI	GCGC	3 cut(s)	1549, 1974, 2006
Cfr10I	RCCGGY	1 cut(s)	1688
Cfr13I	GGNCC	2 cut(s)	112, 1811
Cfr42I	CCGCGG	1 cut(s)	2262
CseI	GACGC	3 cut(s)	360, 376, 1822
Csp6I	GTAC	4 cut(s)	307, 313, 592, 761
CviAII	CATG	9 cut(s)	60, 481, 669, 1090, 1301, 1486, 1583, 1674, 2246
CviQI	GTAC	4 cut(s)	307, 313, 592, 761
DdeI	CTNAG	5 cut(s)	173, 1098, 1335, 1829, 1893
DpnI	GATC	5 cut(s)	558, 667, 1332, 1679, 2198
DpnII	GATC	5 cut(s)	556, 665, 1330, 1677, 2196
DriI	GACNNNNNGTC	1 cut(s)	2031
EaeI	YGGCCR	3 cut(s)	259, 1488, 2205
Eam1104I	CTCTTC	3 cut(s)	46, 150, 1544
Eam1105I	GACNNNNNGTC	1 cut(s)	2031
EarI	CTCTTC	3 cut(s)	46, 150, 1544
Eco130I	CCWWGG	1 cut(s)	2275
Eco24I	GRGCYC	1 cut(s)	2012
Eco31I	GGTCTC	2 cut(s)	926, 1830
Eco57I	CTGAAG	3 cut(s)	123, 1233, 1933
Eco88I	CYCGRG	1 cut(s)	1816
EcoNI	CCTNNNNNAGG	1 cut(s)	1079
EcoRII	CCWGG	1 cut(s)	874
EcoT14I	CCWWGG	1 cut(s)	2275
EcoT22I	ATGCAT	1 cut(s)	1327
EcoT38I	GRGCYC	1 cut(s)	2012
ErhI	CCWWGG	1 cut(s)	2275
Esp3I	CGTCTC	2 cut(s)	1813, 1840
FaeI	CATG	9 cut(s)	63, 484, 672, 1093, 1304, 1489, 1586, 1677, 2249
FalI	AAGNNNNNCTT	2 cut(s)	1971, 2003
FaqI	GGGAC	1 cut(s)	363
FatI	CATG	9 cut(s)	59, 480, 668, 1089, 1300, 1485, 1582, 1673, 2245
FauI	CCCGC	5 cut(s)	910, 1983, 1999, 2097, 2266
FblI	GTMKAC	1 cut(s)	1647
FokI	GGATG	3 cut(s)	382, 390, 2213
FriOI	GRGCYC	1 cut(s)	2012
FspBI	CTAG	8 cut(s)	365, 792, 812, 1179, 1551, 1944, 2001, 2347
GlaI	GCGC	3 cut(s)	1548, 1973, 2005
GsaI	CCCAGC	2 cut(s)	1022, 2120
HaeII	RGCGCY	1 cut(s)	1975
HaeIII	GGCC	5 cut(s)	113, 261, 1490, 1812, 2207
HapII	CCGG	3 cut(s)	1366, 1505, 1689
HgaI	GACGC	3 cut(s)	360, 376, 1822
HhaI	GCGC	3 cut(s)	1549, 1974, 2006
Hin1II	CATG	9 cut(s)	63, 484, 672, 1093, 1304, 1489, 1586, 1677, 2249
Hin6I	GCGC	3 cut(s)	1547, 1972, 2004
HinP1I	GCGC	3 cut(s)	1547, 1972, 2004
HincII	GTYRAC	2 cut(s)	1372, 1911
HindII	GTYRAC	2 cut(s)	1372, 1911
HindIII	AAGCTT	1 cut(s)	193
HinfI	GANTC	9 cut(s)	99, 584, 821, 827, 1129, 1510, 1598, 1784, 2321
HpaI	GTTAAC	1 cut(s)	1372
HpaII	CCGG	3 cut(s)	1366, 1505, 1689
HphI	GGTGA	2 cut(s)	1883, 2004
Hpy188I	TCNGA	5 cut(s)	695, 826, 909, 1189, 1940
Hpy188III	TCNNGA	9 cut(s)	96, 103, 391, 1334, 1444, 2023, 2063, 2252, 2308
Hpy99I	CGWCG	1 cut(s)	1560
HpyCH4III	ACNGT	7 cut(s)	205, 360, 625, 745, 941, 1499, 1824
HpyCH4IV	ACGT	4 cut(s)	311, 580, 1558, 1963
HpyF3I	CTNAG	5 cut(s)	173, 1098, 1335, 1829, 1893
HpySE526I	ACGT	4 cut(s)	311, 580, 1558, 1963
Hsp92II	CATG	9 cut(s)	63, 484, 672, 1093, 1304, 1489, 1586, 1677, 2249
HspAI	GCGC	3 cut(s)	1547, 1972, 2004
KroI	GCCGGC	1 cut(s)	1688
KroNI	GCCGGC	1 cut(s)	1690
KspAI	GTTAAC	1 cut(s)	1372
KspI	CCGCGG	1 cut(s)	2262
Kzo9I	GATC	5 cut(s)	556, 665, 1330, 1677, 2196
LguI	GCTCTTC	2 cut(s)	46, 150
LmnI	GCTCC	6 cut(s)	166, 1777, 1927, 2118, 2254, 2341
Lsp1109I	GCAGC	8 cut(s)	68, 877, 1002, 1427, 2097, 2104, 2221, 2297
LweI	GCATC	6 cut(s)	1312, 1339, 1427, 1879, 2086, 2142
MaeI	CTAG	8 cut(s)	365, 792, 812, 1179, 1551, 1944, 2001, 2347
MaeII	ACGT	4 cut(s)	311, 580, 1558, 1963
MaeIII	GTNAC	7 cut(s)	434, 1255, 1401, 1559, 1669, 1804, 2047
MalI	GATC	5 cut(s)	558, 667, 1332, 1679, 2198
MboI	GATC	5 cut(s)	556, 665, 1330, 1677, 2196
MflI	RGATCY	3 cut(s)	556, 1677, 2196
MhlI	GDGCHC	2 cut(s)	203, 2012
MlsI	TGGCCA	2 cut(s)	261, 1490
MluCI	AATT	6 cut(s)	1183, 1231, 1514, 1751, 1847, 2072
MluNI	TGGCCA	2 cut(s)	261, 1490
MlyI	GAGTC	2 cut(s)	593, 1607
MmeI	TCCRAC	1 cut(s)	355
Mox20I	TGGCCA	2 cut(s)	261, 1490
Mph1103I	ATGCAT	1 cut(s)	1327
MroNI	GCCGGC	1 cut(s)	1688
MroXI	GAANNNNTTC	3 cut(s)	360, 1514, 1578
MscI	TGGCCA	2 cut(s)	261, 1490
MseI	TTAA	2 cut(s)	1116, 1371
MslI	CAYNNNNRTG	2 cut(s)	1223, 1347
Msp20I	TGGCCA	2 cut(s)	261, 1490
MspA1I	CMGCKG	2 cut(s)	1790, 2261
MspCI	CTTAAG	1 cut(s)	1115
MspI	CCGG	3 cut(s)	1366, 1505, 1689
MspR9I	CCNGG	3 cut(s)	876, 1367, 1506
Mva1269I	GAATGC	2 cut(s)	87, 1318
MvaI	CCWGG	1 cut(s)	876
MvnI	CGCG	8 cut(s)	354, 2006, 2024, 2040, 2064, 2204, 2212, 2261
NaeI	GCCGGC	1 cut(s)	1690
NciI	CCSGG	2 cut(s)	1367, 1506
NdeII	GATC	5 cut(s)	556, 665, 1330, 1677, 2196
NgoMIV	GCCGGC	1 cut(s)	1688
NheI	GCTAGC	2 cut(s)	1178, 1943
NlaIII	CATG	9 cut(s)	63, 484, 672, 1093, 1304, 1489, 1586, 1677, 2249
NlaIV	GGNNCC	5 cut(s)	114, 720, 1086, 1679, 1813
NmeAIII	GCCGAG	1 cut(s)	2261
NmuCI	GTSAC	5 cut(s)	434, 1401, 1669, 1804, 2047
NruI	TCGCGA	2 cut(s)	2024, 2064
NsiI	ATGCAT	1 cut(s)	1327
NspI	RCATGY	3 cut(s)	63, 484, 2249
NspV	TTCGAA	1 cut(s)	1132
PaeI	GCATGC	2 cut(s)	63, 2249
PaqCI	CACCTGC	1 cut(s)	2023
PciSI	GCTCTTC	2 cut(s)	46, 150
PctI	GAATGC	2 cut(s)	87, 1318
PdiI	GCCGGC	1 cut(s)	1690
PdmI	GAANNNNTTC	3 cut(s)	360, 1514, 1578
PfeI	GAWTC	7 cut(s)	99, 821, 827, 1129, 1510, 1784, 2321
PfoI	TCCNGGA	1 cut(s)	874
PleI	GAGTC	2 cut(s)	592, 1606
PpsI	GAGTC	2 cut(s)	592, 1606
Ppu21I	YACGTR	1 cut(s)	312
PsiI	TTATAA	1 cut(s)	302
Psp6I	CCWGG	1 cut(s)	874
PspFI	CCCAGC	2 cut(s)	1018, 2116
PspGI	CCWGG	1 cut(s)	874
PspN4I	GGNNCC	5 cut(s)	114, 720, 1086, 1679, 1813
PspPI	GGNCC	2 cut(s)	112, 1811
PstI	CTGCAG	1 cut(s)	1243
PstNI	CAGNNNCTG	1 cut(s)	1780
PsuI	RGATCY	3 cut(s)	556, 1677, 2196
PvuII	CAGCTG	1 cut(s)	1790
RruI	TCGCGA	2 cut(s)	2024, 2064
RsaI	GTAC	4 cut(s)	308, 314, 593, 762
RsaNI	GTAC	4 cut(s)	307, 313, 592, 761
RseI	CAYNNNNRTG	2 cut(s)	1223, 1347
SacII	CCGCGG	1 cut(s)	2262
SapI	GCTCTTC	2 cut(s)	46, 150
SaqAI	TTAA	2 cut(s)	1116, 1371
Sau3AI	GATC	5 cut(s)	556, 665, 1330, 1677, 2196
Sau96I	GGNCC	2 cut(s)	112, 1811
SchI	GAGTC	2 cut(s)	593, 1607
ScrFI	CCNGG	3 cut(s)	876, 1367, 1506
SduI	GDGCHC	2 cut(s)	203, 2012
SfaNI	GCATC	6 cut(s)	1312, 1339, 1427, 1879, 2086, 2142
SfcI	CTRYAG	3 cut(s)	222, 542, 1239
Sfr303I	CCGCGG	1 cut(s)	2262
SfuI	TTCGAA	1 cut(s)	1132
SgrBI	CCGCGG	1 cut(s)	2262
SmiMI	CAYNNNNRTG	2 cut(s)	1223, 1347
SmlI	CTYRAG	2 cut(s)	196, 1115
SmoI	CTYRAG	2 cut(s)	196, 1115
SphI	GCATGC	2 cut(s)	63, 2249
Sse9I	AATT	6 cut(s)	1183, 1231, 1514, 1751, 1847, 2072
SsiI	CCGC	7 cut(s)	917, 1976, 2006, 2090, 2204, 2259, 2261
SspI	AATATT	2 cut(s)	423, 772
SspMI	CTAG	8 cut(s)	365, 792, 812, 1179, 1551, 1944, 2001, 2347
StyD4I	CCNGG	3 cut(s)	874, 1365, 1504
StyI	CCWWGG	1 cut(s)	2275
TaaI	ACNGT	7 cut(s)	205, 360, 625, 745, 941, 1499, 1824
TaiI	ACGT	4 cut(s)	314, 583, 1561, 1966
TaqI	TCGA	4 cut(s)	46, 1132, 1235, 1863
TasI	AATT	6 cut(s)	1183, 1231, 1514, 1751, 1847, 2072
TatI	WGTACW	2 cut(s)	306, 591
TauI	GCSGC	2 cut(s)	2207, 2264
TfiI	GAWTC	7 cut(s)	99, 821, 827, 1129, 1510, 1784, 2321
Tru1I	TTAA	2 cut(s)	1116, 1371
Tru9I	TTAA	2 cut(s)	1116, 1371
TscAI	CASTG	7 cut(s)	763, 946, 1038, 1608, 1813, 1957, 2322
TseFI	GTSAC	5 cut(s)	434, 1401, 1669, 1804, 2047
TseI	GCWGC	8 cut(s)	56, 890, 1015, 1415, 2092, 2110, 2234, 2285
Tsp45I	GTSAC	5 cut(s)	434, 1401, 1669, 1804, 2047
TspDTI	ATGAA	9 cut(s)	490, 633, 691, 886, 1207, 1304, 1317, 1531, 1571
TspRI	CASTG	7 cut(s)	763, 946, 1038, 1608, 1813, 1957, 2322
Vha464I	CTTAAG	1 cut(s)	1115
XagI	CCTNNNNNAGG	1 cut(s)	1079
XapI	RAATTY	1 cut(s)	1751
XceI	RCATGY	3 cut(s)	63, 484, 2249
XmiI	GTMKAC	1 cut(s)	1647
XmnI	GAANNNNTTC	3 cut(s)	360, 1514, 1578
XspI	CTAG	8 cut(s)	365, 792, 812, 1179, 1551, 1944, 2001, 2347
Zsp2I	ATGCAT	1 cut(s)	1327

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.