Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0008247

Physical Location & Seq

Genomic Coordinates Reverse (-)

26079138 .. 26088759

Gene Structure 9622 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1213900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2367 bp

ATGAATCTGTACGCGCACGATCTCTCTCTCATGGACTTCAACTCCCATGATTTCTCCGATCCTTATTCCGATCCCTATTCCGATCCCTTCCCTCACCGCCCTACTTCTTTACTCTCCGATTCCCGAACTGCCCCTCATCGCACCGACGACGTAGCTTCTGATGCCAGGGACGATTATGACAACAAAAGCACCACCAAGCGCGTGGAGCGCAGTCGCAGCCCTCCCAAATACCGCCACGACGGCACTTCGCCTCTCCCTCTGGGCATGGATTGGAGCCCTCCTCCTCGCAAATGGGATGGACGAGACTCTGTTTGGCCACATAACCCACATACAGGATGGAGTTACTGTGTCACTGTTCCTTCTTGGATGTTCCTGCCCAAGTCAAGAGGTTCAGATCCTGTGGTGTTTTATAGGGTTCAAGTTGGTATACAATCGCCTGAAGGAATCACCACTACTCGGGGGATATTACGAAGATTTAACGATTTTTTGAAGCTATCTTCCGAACTTAAAAAGGCGTTCCCCACAAAAGATCTTCCCCCAGCTCCTCCAAAGGGGTTTCTGAGAGTGAAAAGTCGGACACTATTGGAAGAGCGAAGGCGTTCTTTGGAGGATTGGATTGAAAAGCTATTATCGGACATTGATTTATCAAGAAATGTCTTGGTTGGAACCTTTCTTGAGCTTGAAGCTGCTGCGAGGTCTTCATTCCATGAAGACAATCAGGAATCTGCAGATGTAAACTCTTCGACTAGTGGCGCAGCTCCATCATTTCTGGTACAAGCTCATTCAGATCTTTCCATTGTTGCTGCTAGTTCATCTATCACATCAGATTATGGTAATGATACTCCCTTTGATGTATCTGAGAATGGAACACCAAGGCATGGAGGAGATGATAACCATTCTGATCTTGGCATGGAGAATTCAACATTTGAACATGACTTAGTTGATTCAATGGAAAATTCTAAATTTGGCATATTCAACCGGAATTTTATCCAGTCAAGCCTAGAAAGGTTCTCCAGGCGCAAAATGCCTGGCAGAAGTTATGCCAGTAGTACAGATAGGGACCGAGTAAGCGAGAATAACTCTGATGCCAAACCTCTTCGTATGGATGGAACAGAGTTCTTTTCAGAAATAGAAAATTACAACCGGGATGGCCATGTTCGAAGGCTTTCAACGGAGAGTTTTGGTAGTGACTCGAGTTCTATGAGAGTTACTGAAACATCTAACTTGGGAGTGGCCAATTTATTCGGTGATGGCTCCCTTGATCTTGCAGAAGGTTCTGAAGCTCCTAATGCTGTTGTCAAATCTGATTTAAGGCTTTCAAGGGACTTAGTAGTTGCTTTTCCATCTGAGGAGCGACATAAGTTAAACAGGGTTCTAACTACATTGCAGCAGAGACTAGCCACAGCAAAAACGGATGTTGAGGATCTTATTGCTAGATTGAATCAAGAAGTTGCTGTGAGACAATTCCTCACAACAAAGGTCAAAGATTTGGAAGTTGATCTTGAAACTACCAGACAGAATTGTAAAGAAAACATGCAGCAGACAGTTTTAACCGAAAAAGAAAGGTTTACCCAAATGCAGTGGGATATGGAGGAACTCCGTAGGAGATGCTTGGACTTGGAATCACAACTAAAATCTGAGCAGGACGAAAGGATGCATTCAGAGTCAACAAAAGTGTCCATCCTTCATGAGAATGATGTGTTACACCAGGAGTTGGATGCCTCTAAGCAGCAACTTGAGAACTTGCAGAAATATCATGAAGAGTTTGAGGCAAAGTCAAAGACAGATGTAAAGCTACTTGTTAAAGAGGTCAAATCTCTTCGGAATTCACAATCAGAATTGAAGCAGGAACTTAGTCGATTGATGAAAGAGAAATTAGAAGTAGAGAGAATTCTTCACAAGGAAAGGCGAAGGACAGAGTCGGCAAATACTGCCAATGCAAAGTTGTTACATGAATGTGAAATCCTTCTCAATCGGCTTCAAGAATGTAGCGTTAATTTCCTTGTTGAAGAGGAAGATAAGCTCATTATGGATACTTCATCTCCATCTGATGCTATAGATTTACTGACAACTTCTGACAATCGAATTGGTCTCCTTCTGGCGGAGGCACAGCTCCTCGCCCAGGACGTGGAAAACACTGTTATGGCGGCAGACGAAAGTCACAACGTCAATGGTAATGATAGGAAGGCTGATGATGAGCTGAGGAAGATGCTGACAGATCAGTTTGTCGACAATGCCAGATTAAGGATGCAGGTCAACTCGGTAATCCGCTGTGCGTTGTACACAAATATGAAAGCTGAAGAAGATGATGAAGACGGAGATACGCATCTAAGGAAAACTGTTCTAAGCAAATTCTTGGAAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0006810 GO:0008104 GO:0008150 GO:0010008 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0031090 GO:0031410 GO:0031982 GO:0033036 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0044422 GO:0044424 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0051179 GO:0051234 GO:0071702 GO:0071705 GO:0097708 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

789

Amino Acids

89.83

Weight (kDa)

5.25

Isoelectric Point (pI)

54.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PX	PF00787	153 - 226	2.3e-13	PX domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008247)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G15920
fragaria_vesca	FvH4_6g29460 FvH4_6g29460 FvH4_6g29460 FvH4_6g29460 FvH4_6g29460 FvH4_6g29460 FvH4_6g29460 FvH4_6g29460
malus_domestica	MD17G1213900.v1.1
prunus_persica	Prupe.3G089800_v2.0.a1
pyrus_communis	pycom17g21880
rosa_chinensis	RchiOBHm_Chr2g0134961
rosa_laevigata	RLG00000019433
rosa_multiflora	Rmu_sc0001385.1_g000009
rosa_roxburghii	Rroxscaffold_2G00109610
rosa_rugosa	Rorug02G0321500 Rorug02G0321600
rosa_samantha	Rh2AG372300 Rh2BG379200 Rh2CG358100 Rh2DG395800
rosa_wichuraiana	Rw2G030440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2242
AccB7I	CCANNNNNTGG	3 cut(s)	878, 1714, 2128
AccI	GTMKAC	2 cut(s)	427, 2229
AccII	CGCG	2 cut(s)	14, 201
AciI	CCGC	5 cut(s)	97, 232, 2102, 2147, 2269
AclWI	GGATC	5 cut(s)	53, 65, 77, 389, 1431
AcoI	YGGCCR	3 cut(s)	314, 1150, 1233
AcsI	RAATTY	7 cut(s)	916, 955, 962, 982, 1825, 1890, 2351
AcuI	CTGAAG	3 cut(s)	459, 1299, 2319
AfaI	GTAC	4 cut(s)	11, 774, 1051, 2282
AfiI	CCNNNNNNNGG	9 cut(s)	332, 456, 551, 878, 1714, 2101, 2122, 2128, 2244
AhlI	ACTAGT	1 cut(s)	746
AjiI	CACGTC	1 cut(s)	2128
AjnI	CCWGG	5 cut(s)	164, 1013, 1027, 1707, 2121
Alw26I	GTCTC	4 cut(s)	297, 1387, 1453, 2096
AlwI	GGATC	5 cut(s)	53, 65, 77, 389, 1431
AlwNI	CAGNNNCTG	1 cut(s)	398
Ama87I	CYCGRG	2 cut(s)	456, 1192
AoxI	GGCC	3 cut(s)	314, 1150, 1233
ApeKI	GCWGC	8 cut(s)	216, 686, 689, 755, 803, 1387, 1537, 1729
ApoI	RAATTY	7 cut(s)	916, 955, 962, 982, 1825, 1890, 2351
Asp700I	GAANNNNTTC	3 cut(s)	598, 1165, 1965
AspLEI	GCGC	5 cut(s)	16, 201, 210, 755, 1020
AspS9I	GGNCC	1 cut(s)	1060
AsuC2I	CCSGG	1 cut(s)	1145
AsuHPI	GGTGA	3 cut(s)	86, 439, 1259
AsuII	TTCGAA	1 cut(s)	1159
AvaI	CYCGRG	2 cut(s)	456, 1192
AvaII	GGWCC	1 cut(s)	1060
BalI	TGGCCA	3 cut(s)	316, 1152, 1235
BanII	GRGCYC	1 cut(s)	278
BbsI	GAAGAC	3 cut(s)	690, 717, 2319
BbvCI	CCTCAGC	1 cut(s)	2201
BbvI	GCAGC	8 cut(s)	228, 673, 676, 767, 790, 1399, 1549, 1741
BccI	CCATC	9 cut(s)	290, 330, 769, 1100, 1142, 1244, 1351, 1688, 2053
BceAI	ACGGC	1 cut(s)	256
BciT130I	CCWGG	5 cut(s)	166, 1015, 1029, 1709, 2123
BciVI	GTATCC	1 cut(s)	2026
BcnI	CCSGG	1 cut(s)	1145
BcoDI	GTCTC	4 cut(s)	297, 1387, 1453, 2096
BcuI	ACTAGT	1 cut(s)	746
BfaI	CTAG	5 cut(s)	747, 807, 1001, 1397, 1434
BfmI	CTRYAG	2 cut(s)	726, 2055
BfuAI	ACCTGC	1 cut(s)	2242
BfuI	GTATCC	1 cut(s)	2026
BglI	GCCNNNNNGGC	1 cut(s)	240
BglII	AGATCT	2 cut(s)	529, 787
BisI	GCNGC	9 cut(s)	217, 687, 690, 756, 804, 1388, 1538, 1730, 2148
BlsI	GCNGC	9 cut(s)	218, 688, 691, 757, 805, 1389, 1539, 1731, 2149
Bme1390I	CCNGG	6 cut(s)	166, 1015, 1029, 1145, 1709, 2123
Bme18I	GGWCC	1 cut(s)	1060
BmeT110I	CYCGRG	2 cut(s)	456, 1192
BmgBI	CACGTC	1 cut(s)	2128
BmgT120I	GGNCC	1 cut(s)	1060
BmiI	GGNNCC	4 cut(s)	275, 667, 1061, 1255
BmrFI	CCNGG	6 cut(s)	166, 1015, 1029, 1145, 1709, 2123
BmsI	GCATC	9 cut(s)	151, 1075, 1598, 1644, 1708, 2041, 2199, 2238, 2335
BoxI	GACNNNNGTC	1 cut(s)	2157
BpiI	GAAGAC	3 cut(s)	690, 717, 2319
BplI	GAGNNNNNCTC	4 cut(s)	265, 297, 1064, 1096
BpmI	CTGGAG	1 cut(s)	997
Bpu10I	CCTNAGC	1 cut(s)	2201
Bpu14I	TTCGAA	1 cut(s)	1159
BpuEI	CTTGAG	2 cut(s)	695, 1757
BpuMI	CCSGG	1 cut(s)	1145
BsaBI	GATNNNNATC	1 cut(s)	2325
BsaI	GGTCTC	1 cut(s)	2096
BsaJI	CCNNGG	3 cut(s)	165, 872, 2121
BsaWI	WCCGGW	1 cut(s)	978
BsaXI	ACNNNNNCTCC	6 cut(s)	26, 56, 331, 361, 2026, 2056
Bsc4I	CCNNNNNNNGG	9 cut(s)	332, 456, 551, 878, 1714, 2101, 2122, 2128, 2244
Bse1I	ACTGG	2 cut(s)	991, 1044
Bse3DI	GCAATG	1 cut(s)	1382
Bse8I	GATNNNNATC	1 cut(s)	2325
BseBI	CCWGG	5 cut(s)	166, 1015, 1029, 1709, 2123
BseDI	CCNNGG	3 cut(s)	165, 872, 2121
BseJI	GATNNNNATC	1 cut(s)	2325
BseLI	CCNNNNNNNGG	9 cut(s)	332, 456, 551, 878, 1714, 2101, 2122, 2128, 2244
BseMI	GCAATG	1 cut(s)	1382
BseMII	CTCAG	5 cut(s)	551, 849, 1338, 1629, 2192
BseNI	ACTGG	2 cut(s)	991, 1044
BseRI	GAGGAG	6 cut(s)	270, 273, 534, 897, 1364, 2105
BseXI	GCAGC	8 cut(s)	228, 673, 676, 767, 790, 1399, 1549, 1741
BseYI	CCCAGC	1 cut(s)	538
Bsh1236I	CGCG	2 cut(s)	14, 201
BshFI	GGCC	3 cut(s)	316, 1152, 1235
BsiHKCI	CYCGRG	2 cut(s)	456, 1192
BsiSI	CCGG	2 cut(s)	979, 1144
BslFI	GGGAC	3 cut(s)	182, 1073, 1337
BslI	CCNNNNNNNGG	9 cut(s)	332, 456, 551, 878, 1714, 2101, 2122, 2128, 2244
BsmAI	GTCTC	4 cut(s)	297, 1387, 1453, 2096
BsmFI	GGGAC	3 cut(s)	182, 1073, 1337
BsmI	GAATGC	1 cut(s)	1657
BsnI	GGCC	3 cut(s)	316, 1152, 1235
Bso31I	GGTCTC	1 cut(s)	2096
BsoBI	CYCGRG	2 cut(s)	456, 1192
Bsp119I	TTCGAA	1 cut(s)	1159
Bsp1286I	GDGCHC	1 cut(s)	278
Bsp1407I	TGTACA	1 cut(s)	2280
BspACI	CCGC	5 cut(s)	97, 232, 2102, 2147, 2269
BspANI	GGCC	3 cut(s)	316, 1152, 1235
BspCNI	CTCAG	5 cut(s)	552, 850, 1339, 1630, 2193
BspFNI	CGCG	2 cut(s)	14, 201
BspHI	TCATGA	2 cut(s)	1687, 1756
BspLI	GGNNCC	4 cut(s)	275, 667, 1061, 1255
BspMAI	CTGCAG	1 cut(s)	730
BspMI	ACCTGC	1 cut(s)	2242
BspPI	GGATC	5 cut(s)	53, 65, 77, 389, 1431
BspQI	GCTCTTC	1 cut(s)	582
BspT104I	TTCGAA	1 cut(s)	1159
BspTNI	GGTCTC	1 cut(s)	2096
BsrDI	GCAATG	1 cut(s)	1382
BsrGI	TGTACA	1 cut(s)	2280
BsrI	ACTGG	2 cut(s)	991, 1044
BssECI	CCNNGG	3 cut(s)	165, 872, 2121
BssNAI	GTATAC	1 cut(s)	428
BssT1I	CCWWGG	1 cut(s)	872
Bst1107I	GTATAC	1 cut(s)	428
Bst2UI	CCWGG	5 cut(s)	166, 1015, 1029, 1709, 2123
Bst4CI	ACNGT	5 cut(s)	347, 355, 1546, 2140, 2341
Bst6I	CTCTTC	6 cut(s)	582, 745, 1101, 1755, 1824, 2004
BstAPI	GCANNNNNTGC	1 cut(s)	1931
BstAUI	TGTACA	1 cut(s)	2280
BstBI	TTCGAA	1 cut(s)	1159
BstENI	CCTNNNNNAGG	1 cut(s)	2120
BstFNI	CGCG	2 cut(s)	14, 201
BstHHI	GCGC	5 cut(s)	16, 201, 210, 755, 1020
BstMAI	GTCTC	4 cut(s)	297, 1387, 1453, 2096
BstMWI	GCNNNNNNNGC	8 cut(s)	161, 205, 207, 216, 240, 1024, 1289, 1931
BstNI	CCWGG	5 cut(s)	166, 1015, 1029, 1709, 2123
BstNSI	RCATGY	1 cut(s)	1537
BstPAI	GACNNNNGTC	1 cut(s)	2157
BstSCI	CCNGG	6 cut(s)	164, 1013, 1027, 1143, 1707, 2121
BstSFI	CTRYAG	2 cut(s)	726, 2055
BstUI	CGCG	2 cut(s)	14, 201
BstV1I	GCAGC	8 cut(s)	228, 673, 676, 767, 790, 1399, 1549, 1741
BstV2I	GAAGAC	3 cut(s)	690, 717, 2319
BstX2I	RGATCY	4 cut(s)	394, 529, 787, 1423
BstXI	CCANNNNNNTGG	1 cut(s)	202
BstYI	RGATCY	4 cut(s)	394, 529, 787, 1423
BstZ17I	GTATAC	1 cut(s)	428
BsuI	GTATCC	1 cut(s)	2026
BsuRI	GGCC	3 cut(s)	316, 1152, 1235
BtgZI	GCGATG	1 cut(s)	122
BtrI	CACGTC	1 cut(s)	2128
BtsI	GCAGTG	1 cut(s)	1586
BtsIMutI	CAGTG	3 cut(s)	351, 1586, 2136
BveI	ACCTGC	1 cut(s)	2242
CaiI	CAGNNNCTG	1 cut(s)	398
CciI	TCATGA	2 cut(s)	1687, 1756
CfoI	GCGC	5 cut(s)	16, 201, 210, 755, 1020
Cfr13I	GGNCC	1 cut(s)	1060
Csp6I	GTAC	4 cut(s)	10, 773, 1050, 2281
CspCI	CAANNNNNGTGG	2 cut(s)	1562, 1597
CviQI	GTAC	4 cut(s)	10, 773, 1050, 2281
EaeI	YGGCCR	3 cut(s)	314, 1150, 1233
Eam1104I	CTCTTC	6 cut(s)	582, 745, 1101, 1755, 1824, 2004
EarI	CTCTTC	6 cut(s)	582, 745, 1101, 1755, 1824, 2004
EciI	GGCGGA	1 cut(s)	2117
Eco130I	CCWWGG	1 cut(s)	872
Eco24I	GRGCYC	1 cut(s)	278
Eco31I	GGTCTC	1 cut(s)	2096
Eco47I	GGWCC	1 cut(s)	1060
Eco57I	CTGAAG	3 cut(s)	459, 1299, 2319
Eco88I	CYCGRG	2 cut(s)	456, 1192
EcoNI	CCTNNNNNAGG	1 cut(s)	2120
EcoRI	GAATTC	3 cut(s)	916, 1825, 1890
EcoRII	CCWGG	5 cut(s)	164, 1013, 1027, 1707, 2121
EcoT14I	CCWWGG	1 cut(s)	872
EcoT22I	ATGCAT	1 cut(s)	1659
EcoT38I	GRGCYC	1 cut(s)	278
ErhI	CCWWGG	1 cut(s)	872
FalI	AAGNNNNNCTT	4 cut(s)	586, 618, 1485, 1517
FaqI	GGGAC	3 cut(s)	182, 1073, 1337
FblI	GTMKAC	2 cut(s)	427, 2229
Fnu4HI	GCNGC	9 cut(s)	217, 687, 690, 756, 804, 1388, 1538, 1730, 2148
FriOI	GRGCYC	1 cut(s)	278
Fsp4HI	GCNGC	9 cut(s)	217, 687, 690, 756, 804, 1388, 1538, 1730, 2148
FspBI	CTAG	5 cut(s)	747, 807, 1001, 1397, 1434
GlaI	GCGC	5 cut(s)	15, 200, 209, 754, 1019
GluI	GCNGC	9 cut(s)	217, 687, 690, 756, 804, 1388, 1538, 1730, 2148
GsaI	CCCAGC	1 cut(s)	542
GsuI	CTGGAG	1 cut(s)	997
HaeIII	GGCC	3 cut(s)	316, 1152, 1235
HapII	CCGG	2 cut(s)	979, 1144
HhaI	GCGC	5 cut(s)	16, 201, 210, 755, 1020
Hin6I	GCGC	5 cut(s)	14, 199, 208, 753, 1018
HinP1I	GCGC	5 cut(s)	14, 199, 208, 753, 1018
HincII	GTYRAC	3 cut(s)	1668, 2230, 2257
HindII	GTYRAC	3 cut(s)	1668, 2230, 2257
HpaII	CCGG	2 cut(s)	979, 1144
HphI	GGTGA	3 cut(s)	86, 439, 1259
Hpy166II	GTNNAC	7 cut(s)	428, 736, 1569, 1668, 2230, 2257, 2283
Hpy8I	GTNNAC	7 cut(s)	428, 736, 1569, 1668, 2230, 2257, 2283
Hpy99I	CGWCG	3 cut(s)	149, 152, 242
HpyCH4III	ACNGT	5 cut(s)	347, 355, 1546, 2140, 2341
HpyCH4IV	ACGT	3 cut(s)	150, 2127, 2166
HpyCH4V	TGCA	9 cut(s)	728, 1268, 1387, 1537, 1579, 1657, 1747, 1940, 2251
HpyF10VI	GCNNNNNNNGC	8 cut(s)	161, 205, 207, 216, 240, 1024, 1289, 1931
HpySE526I	ACGT	3 cut(s)	150, 2127, 2166
HspAI	GCGC	5 cut(s)	14, 199, 208, 753, 1018
LguI	GCTCTTC	1 cut(s)	582
LmnI	GCTCC	8 cut(s)	205, 273, 547, 763, 1259, 1288, 1351, 2118
Lsp1109I	GCAGC	8 cut(s)	228, 673, 676, 767, 790, 1399, 1549, 1741
LweI	GCATC	9 cut(s)	151, 1075, 1598, 1644, 1708, 2041, 2199, 2238, 2335
MaeI	CTAG	5 cut(s)	747, 807, 1001, 1397, 1434
MaeII	ACGT	3 cut(s)	150, 2127, 2166
MaeIII	GTNAC	7 cut(s)	341, 349, 1187, 1207, 1701, 1947, 2159
MflI	RGATCY	4 cut(s)	394, 529, 787, 1423
MhlI	GDGCHC	1 cut(s)	278
MlsI	TGGCCA	3 cut(s)	316, 1152, 1235
MluNI	TGGCCA	3 cut(s)	316, 1152, 1235
MlyI	GAGTC	4 cut(s)	299, 1184, 1673, 1928
MmeI	TCCRAC	3 cut(s)	554, 643, 1695
Mox20I	TGGCCA	3 cut(s)	316, 1152, 1235
Mph1103I	ATGCAT	1 cut(s)	1659
MroXI	GAANNNNTTC	3 cut(s)	598, 1165, 1965
MscI	TGGCCA	3 cut(s)	316, 1152, 1235
MseI	TTAA	8 cut(s)	477, 507, 1310, 1364, 1550, 1803, 1995, 2243
MslI	CAYNNNNRTG	4 cut(s)	1692, 1956, 2141, 2288
Msp20I	TGGCCA	3 cut(s)	316, 1152, 1235
MspA1I	CMGCKG	1 cut(s)	2271
MspI	CCGG	2 cut(s)	979, 1144
MspR9I	CCNGG	6 cut(s)	166, 1015, 1029, 1145, 1709, 2123
Mva1269I	GAATGC	1 cut(s)	1657
MvaI	CCWGG	5 cut(s)	166, 1015, 1029, 1709, 2123
MvnI	CGCG	2 cut(s)	14, 201
MwoI	GCNNNNNNNGC	8 cut(s)	161, 205, 207, 216, 240, 1024, 1289, 1931
NciI	CCSGG	1 cut(s)	1145
NlaIV	GGNNCC	4 cut(s)	275, 667, 1061, 1255
NmuCI	GTSAC	3 cut(s)	349, 1187, 2159
NsiI	ATGCAT	1 cut(s)	1659
NspI	RCATGY	1 cut(s)	1537
NspV	TTCGAA	1 cut(s)	1159
PaeR7I	CTCGAG	1 cut(s)	1192
PagI	TCATGA	2 cut(s)	1687, 1756
PciSI	GCTCTTC	1 cut(s)	582
PcsI	WCGNNNNNNNCGW	1 cut(s)	2124
PctI	GAATGC	1 cut(s)	1657
PdmI	GAANNNNTTC	3 cut(s)	598, 1165, 1965
PfeI	GAWTC	7 cut(s)	4, 119, 444, 722, 944, 1441, 1622
PflFI	GACNNNGTC	1 cut(s)	1918
PflMI	CCANNNNNTGG	3 cut(s)	878, 1714, 2128
PkrI	GCNGC	9 cut(s)	218, 688, 691, 757, 805, 1389, 1539, 1731, 2149
PleI	GAGTC	4 cut(s)	299, 1184, 1672, 1927
PpsI	GAGTC	4 cut(s)	299, 1184, 1672, 1927
PshAI	GACNNNNGTC	1 cut(s)	2157
Psp6I	CCWGG	5 cut(s)	164, 1013, 1027, 1707, 2121
PspFI	CCCAGC	1 cut(s)	538
PspGI	CCWGG	5 cut(s)	164, 1013, 1027, 1707, 2121
PspN4I	GGNNCC	4 cut(s)	275, 667, 1061, 1255
PspPI	GGNCC	1 cut(s)	1060
PspXI	VCTCGAGB	1 cut(s)	1192
PstI	CTGCAG	1 cut(s)	730
PstNI	CAGNNNCTG	1 cut(s)	398
PsuI	RGATCY	4 cut(s)	394, 529, 787, 1423
PsyI	GACNNNGTC	1 cut(s)	1918
RsaI	GTAC	4 cut(s)	11, 774, 1051, 2282
RsaNI	GTAC	4 cut(s)	10, 773, 1050, 2281
RseI	CAYNNNNRTG	4 cut(s)	1692, 1956, 2141, 2288
SalI	GTCGAC	1 cut(s)	2228
SapI	GCTCTTC	1 cut(s)	582
SaqAI	TTAA	8 cut(s)	477, 507, 1310, 1364, 1550, 1803, 1995, 2243
SatI	GCNGC	9 cut(s)	217, 687, 690, 756, 804, 1388, 1538, 1730, 2148
Sau96I	GGNCC	1 cut(s)	1060
SchI	GAGTC	4 cut(s)	299, 1184, 1673, 1928
ScrFI	CCNGG	6 cut(s)	166, 1015, 1029, 1145, 1709, 2123
SduI	GDGCHC	1 cut(s)	278
SfaNI	GCATC	9 cut(s)	151, 1075, 1598, 1644, 1708, 2041, 2199, 2238, 2335
SfcI	CTRYAG	2 cut(s)	726, 2055
Sfr274I	CTCGAG	1 cut(s)	1192
SfuI	TTCGAA	1 cut(s)	1159
SinI	GGWCC	1 cut(s)	1060
SlaI	CTCGAG	1 cut(s)	1192
SmiMI	CAYNNNNRTG	4 cut(s)	1692, 1956, 2141, 2288
SmlI	CTYRAG	3 cut(s)	674, 1192, 1736
SmoI	CTYRAG	3 cut(s)	674, 1192, 1736
SpeI	ACTAGT	1 cut(s)	746
SsiI	CCGC	5 cut(s)	97, 232, 2102, 2147, 2269
SspMI	CTAG	5 cut(s)	747, 807, 1001, 1397, 1434
StyD4I	CCNGG	6 cut(s)	164, 1013, 1027, 1143, 1707, 2121
StyI	CCWWGG	1 cut(s)	872
TaaI	ACNGT	5 cut(s)	347, 355, 1546, 2140, 2341
TaiI	ACGT	3 cut(s)	153, 2130, 2169
TaqI	TCGA	6 cut(s)	743, 1159, 1193, 1858, 2083, 2229
TaqII	GACCGA	1 cut(s)	1077
TatI	WGTACW	2 cut(s)	1049, 2280
TauI	GCSGC	1 cut(s)	2150
TfiI	GAWTC	7 cut(s)	4, 119, 444, 722, 944, 1441, 1622
Tru1I	TTAA	8 cut(s)	477, 507, 1310, 1364, 1550, 1803, 1995, 2243
Tru9I	TTAA	8 cut(s)	477, 507, 1310, 1364, 1550, 1803, 1995, 2243
TscAI	CASTG	3 cut(s)	358, 1586, 2143
TseFI	GTSAC	3 cut(s)	349, 1187, 2159
TseI	GCWGC	8 cut(s)	216, 686, 689, 755, 803, 1387, 1537, 1729
Tsp45I	GTSAC	3 cut(s)	349, 1187, 2159
TspGWI	ACGGA	4 cut(s)	1187, 1427, 1589, 2331
TspRI	CASTG	3 cut(s)	358, 1586, 2143
Tth111I	GACNNNGTC	1 cut(s)	1918
Van91I	CCANNNNNTGG	3 cut(s)	878, 1714, 2128
VpaK11BI	GGWCC	1 cut(s)	1060
XagI	CCTNNNNNAGG	1 cut(s)	2120
XapI	RAATTY	7 cut(s)	916, 955, 962, 982, 1825, 1890, 2351
XceI	RCATGY	1 cut(s)	1537
XcmI	CCANNNNNNNNNTGG	3 cut(s)	199, 333, 902
XhoI	CTCGAG	1 cut(s)	1192
XmiI	GTMKAC	2 cut(s)	427, 2229
XmnI	GAANNNNTTC	3 cut(s)	598, 1165, 1965
XspI	CTAG	5 cut(s)	747, 807, 1001, 1397, 1434
Zsp2I	ATGCAT	1 cut(s)	1659

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.