Rorug02G0321600

PX domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0008247
Physical Location & Seq
Forward (+)
39335418 .. 39338246
2829 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0321600.1

Sequence Viewer

Length: 2829 bp
ATGGCTGGAATACTAGTTGACGTTCTGTTAGAGCGTTTGGCTACGCTCGCCCTTGACAAGGTCGAACGCGAGCTGAAGCTGGTGAGAGGGGTTAAGCAAGAAATCAAAAATCTCACCAAGAAACTCAAAGCTATTCGAGCTGTACTGGAGGACGCAGAGCAGAGGCAAGTGATGGAAGCCAGCGTGAAAGATTGGCTGAATGAGCTAAATGATGTTTGTGACGACATGGATGACGTGCTGGATGAGTGGATCACTAGAGCTCTCATGCATCAATTGGAGAAACAAGAAAAACAAGGTGCAAATGCTCTTGCTACTACTAAGAAGAAGGTATGCTTTCCCTTTCCTTCCTCTTGCTTGCGCTTTGGCCAAGTCAATCAGCTATTTCGTCGTCACGAAATTGCTGCGAAGATAAAAGAGCTAAATGAAAGTTTAGATTTGATTGATCAAAACAAACAAAGTTTTGGCTTTCATCAAAACACCACTAGGGTCCCCGAACTACCTCAACGACAAAAAACTACTTCTCTTCCCAATATTAAAACATTTGGTCGAGATAAGGAGAAAAACCTCATAGTTAGCAAGTTGATAAGTGAGAGTAGTCAAGAAAAGGAAGTTCCTCTTATCATCCCTATTGTAGGGATGGGGGGAATGGGGAAAACAACTCTTGCTCAACTTGTTTATAATGATGAAAATGTCAAATCTCATTTTGACAAGAGAATATGGGTCTGTGTCTCGGACCCTTTTGAAGAGATCAAGATTGCTCAAGCTATCATTGAAGAAATAGATAAAGATAATAGTTCAAAAAGCTCAAATGTGTTGCAAACCCTGACGCAATGTATAGATAAATTGATTGAGGGTAAAAAGTTTCTCCTAGTTTTAGATGATGTTTGGAGCCCAAACTCTGATCAATGGGAAGAATTGATCAAACCTTTACGTAATGGTGGTATAGGAAGTAGGATATTGGTGACCACTAGAAAGGAGGAGGTTGTTACTTTAATGAAAGCAACAACTCAATTGATCCATTTGAAGGAGTTGGGTGAAGCATTTTGTTTGTCATTGTTCTACAGTGTAGACATGGATGAGAGTAGTGTGTCCACCGAGTTTAAAAATATTGGATCAGAGATTGTGAAAAGGTGCAATGGGTTGCCTCTTGCTGCAAAGACATTAGGAAGCCTCATGCGTAATAAGAAAAAGATTCATGAATGGCAAGCTGTTTTAAAGAGTAAGACATGGGAATTGAAAGAGATTCAACAAGATGTTTTTCGACCACTACTATTAAGTTATCATGATTTGAGTCCAGCAACCAAACGTTGTCTTTTGTATTGTGTTACATTTCCAAAAGATTATGTGTACAATAGGAATTGTTTGATTGAGTTGTGGATGTCGCAAGATTATTTGAATGTCAAAGAAAGTAAAGAAAAGATAGTGGTTGGTCAAAATTATTTTGATGACTTAGTAATGCGGTCATTTTTTCAAGATATTGAGGATGTTCAGTTTGAGTATGGAAACATAAAATGCAAAATTCATGATATTGTACATGACTTTCTACAATATTTGACAGAAAATGAATGTTTGATTTTGGATTTTGAGTTGGATGCTAGTAAGAGAAGAGATGTGTCAAAGGATAAAGTTCATCATTTGACCTTAGTGCATGCAACCGAGGGTGATTCTCTGCAAACTTTTCTCCCTAATTATAAAAAATTACGTACCTTGATAGCTATACAATCATCCGAATATTCCATTGGCCCAATATTTGAGTTGATAGTACAATTGAAATGCCTTAGAACATTAGACTTGCGTGGTTGGCGGGGGAAGGGTTGTCTCAAAGAAATTCCCGAGACGATAGGTGGATTGATACATTTGAGGTATCTCGATTTATCCGAGAATTTGGGGTTGGAGGAATTACCCAGTGCCCTGGGCAGCTTATACAACCTGCAAACCTTGCGACTTGTTCGTTGCGTGAATCTGAAAAAAGTAGATGTCCGAAGGCTGATTAACTTGAGGCATCTTTATGTTGAAGGCTGTTGGGAGCTAAAGTTAATTGAAGGGATTGAGAAATTAACAGATCTGCAAAGGCTAGATCAGTTTGTTGTCCCAATTATCGGTGGTGATGAAGGAAACAAGTTGGAACATCTGAAAGACTTGAACCAGCTTCAAGGGAGTCTTGCTATTCGTATTCTGGGAAATCCAACTATGGCGGAGAATACAGCAGCAATCATGGTGAATAAGGCTCACCTCCTGGAATTGAGACTAGAGTTTTACTCGGTTGATGAAGGAAAGCATGGAGAAATTATGAATGGCTTAGAGCCGCATCCAGATTTGGAATCTTTATACATCTGGTTTTATAAAGGTGGCGCCTTCTCCCATTGGTTGTCGTATTTACACAGCTTGAGAATGCTCATCCTTGAGACTTGCACGGAATGTGGGGTTTTGCCTCCTTTAGGGAAACTGGCGTCCCTTGAATCATTGCATATTGTGCAACTCCATGGAGTCTCAAAGGTAGGAGTTGAGTTTTTGGGAATAGATGATGGGCAAACCTCCTCATCGTCTTCCATTTTCATATCATTCCCCAAGCTTAAACAACTTGGCTTCTACAACATGGGGCCATGGGAAGAGTGGGTAGGAGTGGAAAATAATAATATTACAATCATGCCATGCCTCTCTCAATTGACAATTGGGTACTGCTACAAGCTAAAAGCACTGCCGGACTTCCTGTGGGAGACACCACTACAGAAATTGCACATCTTTAGATCTCCAATTCTCCAAGACCTTTACAGACAAGGAATAGGTGAGAAGTGGGCCAAGATCCCAACCATCGTGATAGAATACTAA

Protein Analysis

942

Amino Acids

107.83

Weight (kDa)

6.15

Isoelectric Point (pI)

45.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 6 - 96 3.5e-22 Rx N-terminal domain
NB-ARC PF00931 188 - 359 3.9e-36 NB-ARC domain
WHD_DRP PF23559 444 - 514 6e-20 Disease resistance protein Winged helix domain
LRR_14 PF23598 567 - 891 6.1e-22 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 708 - 826 2.1e-26 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 678, 1692, 2343
Acc36I ACCTGC 1 cut(s) 1938
AccB1I GGYRCC 1 cut(s) 2351
AccI GTMKAC 1 cut(s) 1068
AccII CGCG 1 cut(s) 69
AciI CCGC 4 cut(s) 1459, 1804, 2195, 2306
AclI AACGTT 1 cut(s) 1306
AclWI GGATC 4 cut(s) 257, 1009, 1120, 2797
AcoI YGGCCR 1 cut(s) 364
AcsI RAATTY 3 cut(s) 1518, 1827, 1882
AcuI CTGAAG 1 cut(s) 95
AcyI GRCGYC 2 cut(s) 2352, 2450
AfaI GTAC 6 cut(s) 144, 1349, 1533, 1705, 1764, 2678
AfiI CCNNNNNNNGG 5 cut(s) 58, 632, 1024, 2099, 2438
AhlI ACTAGT 1 cut(s) 13
AjiI CACGTC 1 cut(s) 235
AjnI CCWGG 2 cut(s) 1911, 2235
AjuI GAANNNNNNNTTGG 4 cut(s) 1722, 1754, 1874, 1906
Alw21I GWGCWC 1 cut(s) 262
Alw26I GTCTC 7 cut(s) 733, 1823, 1829, 2239, 2399, 2494, 2711
AlwI GGATC 4 cut(s) 257, 1009, 1120, 2797
Ama87I CYCGRG 1 cut(s) 1832
AoxI GGCC 4 cut(s) 364, 1741, 2600, 2796
ApeKI GCWGC 4 cut(s) 401, 1151, 1917, 2207
ApoI RAATTY 3 cut(s) 1518, 1827, 1882
AspLEI GCGC 2 cut(s) 360, 2354
AspS9I GGNCC 5 cut(s) 487, 733, 1742, 2600, 2796
AsuHPI GGTGA 9 cut(s) 94, 106, 973, 1046, 1673, 2117, 2222, 2230, 2798
AvaI CYCGRG 1 cut(s) 1832
AvaII GGWCC 2 cut(s) 487, 733
BaeGI GKGCMC 1 cut(s) 1912
BalI TGGCCA 1 cut(s) 366
BanI GGYRCC 1 cut(s) 2351
BanII GRGCYC 2 cut(s) 262, 893
BbsI GAAGAC 1 cut(s) 2538
Bbv12I GWGCWC 1 cut(s) 262
BbvI GCAGC 4 cut(s) 388, 1138, 1929, 2219
BccI CCATC 4 cut(s) 166, 631, 2519, 2819
BcgI CGANNNNNNTGC 2 cut(s) 383, 417
BciT130I CCWGG 2 cut(s) 1913, 2237
BclI TGATCA 3 cut(s) 442, 901, 918
BcoDI GTCTC 7 cut(s) 733, 1823, 1829, 2239, 2399, 2494, 2711
BcuI ACTAGT 1 cut(s) 13
BfaI CTAG 8 cut(s) 14, 255, 483, 869, 969, 1596, 2075, 2249
BfmI CTRYAG 2 cut(s) 1060, 2726
BfoI RGCGCY 1 cut(s) 2355
BfuAI ACCTGC 1 cut(s) 1938
BglII AGATCT 2 cut(s) 2062, 2747
BisI GCNGC 5 cut(s) 402, 1152, 1918, 2208, 2306
BlsI GCNGC 5 cut(s) 403, 1153, 1919, 2209, 2307
Bme1390I CCNGG 2 cut(s) 1913, 2237
Bme18I GGWCC 2 cut(s) 487, 733
BmeT110I CYCGRG 1 cut(s) 1832
BmgBI CACGTC 1 cut(s) 235
BmgT120I GGNCC 5 cut(s) 487, 733, 1742, 2600, 2796
BmiI GGNNCC 6 cut(s) 488, 489, 735, 890, 2353, 2601
BmrFI CCNGG 2 cut(s) 1913, 2237
BmrI ACTGGG 1 cut(s) 1899
BmsI GCATC 4 cut(s) 277, 1582, 2011, 2317
BmuI ACTGGG 1 cut(s) 1899
BpiI GAAGAC 1 cut(s) 2538
BplI GAGNNNNNCTC 2 cut(s) 2243, 2275
BpmI CTGGAG 1 cut(s) 167
BpuEI CTTGAG 4 cut(s) 744, 2017, 2407, 2423
BsaAI YACGTR 2 cut(s) 932, 1703
BsaHI GRCGYC 2 cut(s) 2352, 2450
BsaJI CCNNGG 5 cut(s) 1656, 1911, 1912, 2482, 2603
BsaXI ACNNNNNCTCC 2 cut(s) 2018, 2048
Bsc4I CCNNNNNNNGG 5 cut(s) 58, 632, 1024, 2099, 2438
Bse1I ACTGG 3 cut(s) 150, 1905, 2451
Bse3DI GCAATG 3 cut(s) 836, 1141, 2462
BseBI CCWGG 2 cut(s) 1913, 2237
BseDI CCNNGG 5 cut(s) 1656, 1911, 1912, 2482, 2603
BseLI CCNNNNNNNGG 5 cut(s) 58, 632, 1024, 2099, 2438
BseMI GCAATG 3 cut(s) 836, 1141, 2462
BseNI ACTGG 3 cut(s) 150, 1905, 2451
BseRI GAGGAG 2 cut(s) 992, 2527
BseSI GKGCMC 1 cut(s) 1912
BseXI GCAGC 4 cut(s) 388, 1138, 1929, 2219
Bsh1236I CGCG 1 cut(s) 69
BshFI GGCC 4 cut(s) 366, 1743, 2602, 2798
BshNI GGYRCC 1 cut(s) 2351
BsiHKAI GWGCWC 1 cut(s) 262
BsiHKCI CYCGRG 1 cut(s) 1832
BsiSI CCGG 1 cut(s) 2702
BslFI GGGAC 3 cut(s) 473, 2075, 2437
BslI CCNNNNNNNGG 5 cut(s) 58, 632, 1024, 2099, 2438
BsmAI GTCTC 7 cut(s) 733, 1823, 1829, 2239, 2399, 2494, 2711
BsmBI CGTCTC 1 cut(s) 1829
BsmFI GGGAC 3 cut(s) 473, 2075, 2437
BsmI GAATGC 1 cut(s) 2397
BsnI GGCC 4 cut(s) 366, 1743, 2602, 2798
BsoBI CYCGRG 1 cut(s) 1832
Bsp1286I GDGCHC 3 cut(s) 262, 893, 1912
Bsp1407I TGTACA 2 cut(s) 1347, 1531
Bsp19I CCATGG 2 cut(s) 2482, 2603
BspACI CCGC 4 cut(s) 1459, 1804, 2195, 2306
BspANI GGCC 4 cut(s) 366, 1743, 2602, 2798
BspFNI CGCG 1 cut(s) 69
BspHI TCATGA 3 cut(s) 1195, 1282, 1522
BspLI GGNNCC 6 cut(s) 488, 489, 735, 890, 2353, 2601
BspMI ACCTGC 1 cut(s) 1938
BspPI GGATC 4 cut(s) 257, 1009, 1120, 2797
BspT107I GGYRCC 1 cut(s) 2351
BsrDI GCAATG 3 cut(s) 836, 1141, 2462
BsrGI TGTACA 2 cut(s) 1347, 1531
BsrI ACTGG 3 cut(s) 150, 1905, 2451
BssECI CCNNGG 5 cut(s) 1656, 1911, 1912, 2482, 2603
BssNI GRCGYC 2 cut(s) 2352, 2450
BssT1I CCWWGG 2 cut(s) 2482, 2603
Bst2UI CCWGG 2 cut(s) 1913, 2237
Bst4CI ACNGT 1 cut(s) 1064
Bst6I CTCTTC 4 cut(s) 528, 738, 1600, 2604
BstACI GRCGYC 2 cut(s) 2352, 2450
BstAPI GCANNNNNTGC 2 cut(s) 1939, 2473
BstAUI TGTACA 2 cut(s) 1347, 1531
BstBAI YACGTR 2 cut(s) 932, 1703
BstC8I GCNNGC 6 cut(s) 48, 71, 181, 356, 1206, 1650
BstDEI CTNAG 5 cut(s) 318, 1450, 1642, 1778, 2299
BstDSI CCRYGG 2 cut(s) 2482, 2603
BstEII GGTNACC 1 cut(s) 961
BstENI CCTNNNNNAGG 3 cut(s) 56, 630, 2436
BstFNI CGCG 1 cut(s) 69
BstH2I RGCGCY 1 cut(s) 2355
BstHHI GCGC 2 cut(s) 360, 2354
BstMAI GTCTC 7 cut(s) 733, 1823, 1829, 2239, 2399, 2494, 2711
BstMWI GCNNNNNNNGC 6 cut(s) 47, 137, 202, 1801, 1939, 2473
BstNI CCWGG 2 cut(s) 1913, 2237
BstNSI RCATGY 1 cut(s) 1652
BstPI GGTNACC 1 cut(s) 961
BstSCI CCNGG 2 cut(s) 1911, 2235
BstSFI CTRYAG 2 cut(s) 1060, 2726
BstSLI GKGCMC 1 cut(s) 1912
BstSNI TACGTA 2 cut(s) 932, 1703
BstUI CGCG 1 cut(s) 69
BstV1I GCAGC 4 cut(s) 388, 1138, 1929, 2219
BstV2I GAAGAC 1 cut(s) 2538
BstX2I RGATCY 3 cut(s) 2062, 2747, 2802
BstXI CCANNNNNNTGG 1 cut(s) 1912
BstYI RGATCY 3 cut(s) 2062, 2747, 2802
BsuRI GGCC 4 cut(s) 366, 1743, 2602, 2798
BtgI CCRYGG 2 cut(s) 2482, 2603
BtrI CACGTC 1 cut(s) 235
BtsI GCAGTG 1 cut(s) 2696
BtsIMutI CAGTG 3 cut(s) 1069, 1912, 2696
BveI ACCTGC 1 cut(s) 1938
Cac8I GCNNGC 6 cut(s) 48, 71, 181, 356, 1206, 1650
CciI TCATGA 3 cut(s) 1195, 1282, 1522
CfoI GCGC 2 cut(s) 360, 2354
Cfr13I GGNCC 5 cut(s) 487, 733, 1742, 2600, 2796
CseI GACGC 3 cut(s) 161, 835, 2439
Csp6I GTAC 6 cut(s) 143, 1348, 1532, 1704, 1763, 2677
CviQI GTAC 6 cut(s) 143, 1348, 1532, 1704, 1763, 2677
DdeI CTNAG 5 cut(s) 318, 1450, 1642, 1778, 2299
DinI GGCGCC 1 cut(s) 2353
DraI TTTAAA 2 cut(s) 1102, 1215
EaeI YGGCCR 1 cut(s) 364
Eam1104I CTCTTC 4 cut(s) 528, 738, 1600, 2604
EarI CTCTTC 4 cut(s) 528, 738, 1600, 2604
EciI GGCGGA 1 cut(s) 2210
Ecl136II GAGCTC 1 cut(s) 260
Eco105I TACGTA 2 cut(s) 932, 1703
Eco130I CCWWGG 2 cut(s) 2482, 2603
Eco24I GRGCYC 2 cut(s) 262, 893
Eco47I GGWCC 2 cut(s) 487, 733
Eco53kI GAGCTC 1 cut(s) 260
Eco57I CTGAAG 1 cut(s) 95
Eco88I CYCGRG 1 cut(s) 1832
Eco91I GGTNACC 1 cut(s) 961
EcoICRI GAGCTC 1 cut(s) 260
EcoNI CCTNNNNNAGG 3 cut(s) 56, 630, 2436
EcoO109I RGGNCCY 1 cut(s) 487
EcoO65I GGTNACC 1 cut(s) 961
EcoRII CCWGG 2 cut(s) 1911, 2235
EcoT14I CCWWGG 2 cut(s) 2482, 2603
EcoT22I ATGCAT 1 cut(s) 270
EcoT38I GRGCYC 2 cut(s) 262, 893
EgeI GGCGCC 1 cut(s) 2353
EheI GGCGCC 1 cut(s) 2353
ErhI CCWWGG 2 cut(s) 2482, 2603
Esp3I CGTCTC 1 cut(s) 1829
FalI AAGNNNNNCTT 6 cut(s) 317, 349, 600, 632, 2145, 2177
FaqI GGGAC 3 cut(s) 473, 2075, 2437
FauI CCCGC 1 cut(s) 1797
FbaI TGATCA 3 cut(s) 442, 901, 918
FblI GTMKAC 1 cut(s) 1068
Fnu4HI GCNGC 5 cut(s) 402, 1152, 1918, 2208, 2306
FriOI GRGCYC 2 cut(s) 262, 893
Fsp4HI GCNGC 5 cut(s) 402, 1152, 1918, 2208, 2306
FspBI CTAG 8 cut(s) 14, 255, 483, 869, 969, 1596, 2075, 2249
GlaI GCGC 2 cut(s) 359, 2353
GluI GCNGC 5 cut(s) 402, 1152, 1918, 2208, 2306
GsuI CTGGAG 1 cut(s) 167
HaeII RGCGCY 1 cut(s) 2355
HaeIII GGCC 4 cut(s) 366, 1743, 2602, 2798
HapII CCGG 1 cut(s) 2702
HgaI GACGC 3 cut(s) 161, 835, 2439
HhaI GCGC 2 cut(s) 360, 2354
Hin1I GRCGYC 2 cut(s) 2352, 2450
Hin6I GCGC 2 cut(s) 358, 2352
HinP1I GCGC 2 cut(s) 358, 2352
HincII GTYRAC 1 cut(s) 19
HindII GTYRAC 1 cut(s) 19
HindIII AAGCTT 1 cut(s) 2570
HinfI GANTC 9 cut(s) 1192, 1243, 1291, 1664, 1960, 2158, 2321, 2459, 2487
HpaII CCGG 1 cut(s) 2702
HphI GGTGA 9 cut(s) 94, 106, 973, 1046, 1673, 2117, 2222, 2230, 2798
Hpy166II GTNNAC 4 cut(s) 19, 1069, 1092, 1348
Hpy188I TCNGA 8 cut(s) 733, 901, 1117, 1729, 1879, 1965, 1982, 2133
Hpy8I GTNNAC 4 cut(s) 19, 1069, 1092, 1348
Hpy99I CGWCG 1 cut(s) 390
HpyCH4III ACNGT 1 cut(s) 1064
HpyCH4IV ACGT 5 cut(s) 21, 234, 931, 1306, 1702
HpyF10VI GCNNNNNNNGC 6 cut(s) 47, 137, 202, 1801, 1939, 2473
HpyF3I CTNAG 5 cut(s) 318, 1450, 1642, 1778, 2299
HpySE526I ACGT 5 cut(s) 21, 234, 931, 1306, 1702
Hsp92I GRCGYC 2 cut(s) 2352, 2450
HspAI GCGC 2 cut(s) 358, 2352
KasI GGCGCC 1 cut(s) 2351
KflI GGGWCCC 1 cut(s) 487
Ksp22I TGATCA 3 cut(s) 442, 901, 918
LmnI GCTCC 2 cut(s) 888, 2026
Lsp1109I GCAGC 4 cut(s) 388, 1138, 1929, 2219
LweI GCATC 4 cut(s) 277, 1582, 2011, 2317
MaeI CTAG 8 cut(s) 14, 255, 483, 869, 969, 1596, 2075, 2249
MaeII ACGT 5 cut(s) 21, 234, 931, 1306, 1702
MaeIII GTNAC 5 cut(s) 218, 389, 961, 985, 1324
MboII GAAGA 9 cut(s) 334, 418, 515, 755, 785, 923, 1617, 2538, 2621
MfeI CAATTG 5 cut(s) 272, 1010, 1766, 2663, 2670
MflI RGATCY 3 cut(s) 2062, 2747, 2802
MhlI GDGCHC 3 cut(s) 262, 893, 1912
MlsI TGGCCA 1 cut(s) 366
MluNI TGGCCA 1 cut(s) 366
Mly113I GGCGCC 1 cut(s) 2352
MlyI GAGTC 3 cut(s) 1300, 2167, 2496
MmeI TCCRAC 4 cut(s) 1569, 1872, 2103, 2210
Mox20I TGGCCA 1 cut(s) 366
Mph1103I ATGCAT 1 cut(s) 270
MscI TGGCCA 1 cut(s) 366
MslI CAYNNNNRTG 1 cut(s) 2007
Msp20I TGGCCA 1 cut(s) 366
MspI CCGG 1 cut(s) 2702
MspR9I CCNGG 2 cut(s) 1913, 2237
MunI CAATTG 5 cut(s) 272, 1010, 1766, 2663, 2670
Mva1269I GAATGC 1 cut(s) 2397
MvaI CCWGG 2 cut(s) 1913, 2237
MvnI CGCG 1 cut(s) 69
MwoI GCNNNNNNNGC 6 cut(s) 47, 137, 202, 1801, 1939, 2473
NarI GGCGCC 1 cut(s) 2352
NcoI CCATGG 2 cut(s) 2482, 2603
NlaIV GGNNCC 6 cut(s) 488, 489, 735, 890, 2353, 2601
NmuCI GTSAC 3 cut(s) 218, 389, 961
NsiI ATGCAT 1 cut(s) 270
NspI RCATGY 1 cut(s) 1652
PaeI GCATGC 1 cut(s) 1652
PagI TCATGA 3 cut(s) 1195, 1282, 1522
PasI CCCWGGG 1 cut(s) 1912
PcsI WCGNNNNNNNCGW 1 cut(s) 1875
PctI GAATGC 1 cut(s) 2397
PfeI GAWTC 6 cut(s) 1192, 1243, 1664, 1960, 2321, 2459
PflFI GACNNNGTC 1 cut(s) 59
PfoI TCCNGGA 1 cut(s) 2235
PkrI GCNGC 5 cut(s) 403, 1153, 1919, 2209, 2307
PleI GAGTC 3 cut(s) 1299, 2166, 2495
PluTI GGCGCC 1 cut(s) 2355
PpsI GAGTC 3 cut(s) 1299, 2166, 2495
Ppu21I YACGTR 2 cut(s) 932, 1703
PpuMI RGGWCCY 1 cut(s) 487
PsiI TTATAA 3 cut(s) 678, 1692, 2343
Psp124BI GAGCTC 1 cut(s) 262
Psp1406I AACGTT 1 cut(s) 1306
Psp5II RGGWCCY 1 cut(s) 487
Psp6I CCWGG 2 cut(s) 1911, 2235
PspEI GGTNACC 1 cut(s) 961
PspGI CCWGG 2 cut(s) 1911, 2235
PspN4I GGNNCC 6 cut(s) 488, 489, 735, 890, 2353, 2601
PspPI GGNCC 5 cut(s) 487, 733, 1742, 2600, 2796
PspPPI RGGWCCY 1 cut(s) 487
PsuI RGATCY 3 cut(s) 2062, 2747, 2802
PsyI GACNNNGTC 1 cut(s) 59
RsaI GTAC 6 cut(s) 144, 1349, 1533, 1705, 1764, 2678
RsaNI GTAC 6 cut(s) 143, 1348, 1532, 1704, 1763, 2677
RseI CAYNNNNRTG 1 cut(s) 2007
SacI GAGCTC 1 cut(s) 262
SatI GCNGC 5 cut(s) 402, 1152, 1918, 2208, 2306
Sau96I GGNCC 5 cut(s) 487, 733, 1742, 2600, 2796
SchI GAGTC 3 cut(s) 1300, 2167, 2496
ScrFI CCNGG 2 cut(s) 1913, 2237
SduI GDGCHC 3 cut(s) 262, 893, 1912
SfaNI GCATC 4 cut(s) 277, 1582, 2011, 2317
SfcI CTRYAG 2 cut(s) 1060, 2726
SfoI GGCGCC 1 cut(s) 2353
SinI GGWCC 2 cut(s) 487, 733
SmiMI CAYNNNNRTG 1 cut(s) 2007
SmlI CTYRAG 4 cut(s) 759, 1996, 2386, 2402
SmoI CTYRAG 4 cut(s) 759, 1996, 2386, 2402
SnaBI TACGTA 2 cut(s) 932, 1703
SpeI ACTAGT 1 cut(s) 13
SphI GCATGC 1 cut(s) 1652
SsiI CCGC 4 cut(s) 1459, 1804, 2195, 2306
SspDI GGCGCC 1 cut(s) 2351
SspI AATATT 6 cut(s) 532, 1108, 1550, 1733, 1749, 2638
SspMI CTAG 8 cut(s) 14, 255, 483, 869, 969, 1596, 2075, 2249
SstI GAGCTC 1 cut(s) 262
StyD4I CCNGG 2 cut(s) 1911, 2235
StyI CCWWGG 2 cut(s) 2482, 2603
TaaI ACNGT 1 cut(s) 1064
TaiI ACGT 5 cut(s) 24, 237, 934, 1309, 1705
TaqI TCGA 5 cut(s) 63, 136, 547, 1261, 1869
TatI WGTACW 4 cut(s) 142, 1347, 1531, 1762
TauI GCSGC 1 cut(s) 2308
TfiI GAWTC 6 cut(s) 1192, 1243, 1664, 1960, 2321, 2459
TscAI CASTG 3 cut(s) 1069, 1912, 2703
TseFI GTSAC 3 cut(s) 218, 389, 961
TseI GCWGC 4 cut(s) 401, 1151, 1917, 2207
Tsp45I GTSAC 3 cut(s) 218, 389, 961
TspGWI ACGGA 1 cut(s) 2429
TspRI CASTG 3 cut(s) 1069, 1912, 2703
Tth111I GACNNNGTC 1 cut(s) 59
VpaK11BI GGWCC 2 cut(s) 487, 733
XagI CCTNNNNNAGG 3 cut(s) 56, 630, 2436
XapI RAATTY 3 cut(s) 1518, 1827, 1882
XceI RCATGY 1 cut(s) 1652
XcmI CCANNNNNNNNNTGG 1 cut(s) 2610
XmiI GTMKAC 1 cut(s) 1068
XspI CTAG 8 cut(s) 14, 255, 483, 869, 969, 1596, 2075, 2249
Zsp2I ATGCAT 1 cut(s) 270
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.