pycom17g21880

PX domain

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Reverse (-)
20292113 .. 20294788
2676 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g21880.3

Sequence Viewer

Length: 1458 bp
ATGGAGCATTCAACATCTGAACATGACTTAGCTGATTCAATGGAAAATTCTAAATTTGGCATATTCAACCGGAATTTTATCCAGTCAAGCCTAGAAAGGCTCTCTAGGCGCAAAATGCCTGGCAGAAGTTATGCCAGTAGTACAGATAGGGACCGAGTAAGCGAGAATAACTCTGATGCCAAACCTCTTCGTATGGATGGAACAGAGTTCTTTTCAGAAATAGAGGATGACAACCGGGATGGCCATGTTCGAAGGCTTTCAACGGAGAGTTTTGGTAGTGACTCGAGTTCTATGAGAGTTAATGAAACATCTAACTTGGGAGTGGCCAATTTATTCGGTGATGGCTCCCTTGATCTTGCAAAAGGTTCTGAAGCTCCTAATGCTTTTGTCAAATCTGATTTAAGGCTTTCAAGGGACTTAGTAGTTGCTCTTCCATCTGAGGAGCGACATAAGTTAAACAGGGTACTAACTACATTGCAGCAGAGACTAGCCACAGCAAAAACGGATGTTGAGGATCTTATTGCTAGATTGAATCAAGAAGTTGCTGTGAGACAATTCCTCACAACAAAGGTCAAAGATTTGGAAATTGATCTTGAAACTACCAGACAGAATTGTAAAGAAAACATGCAGCAGACAGTTTTAACCGAAAAAGAAAGGTTTACCCAAATGCAGTGGGATATGGAGGAACTCCGTAGGAGATGCTTGGACTTGGAATCAAAATTAAAATCTGAGCAGGACGAAAGGATGCATTCAGAGTCAACAAAAGTGTCCATCCTTCATGAGAATGTTGTTTTACACCAGGAGTTGGATGCCTCTAAGCAGCAACTTGAGAACTTGCAGAAATATCATGAAGAGTTTGAGTCAAAGTCAAAGACAGATGTAAAGCTACTTGTTAAAGAGGTCAAATCTCTTCGGAATTCACAATCAGAATTGAAGCAGGAACTTAGTCGATTGATGAAAGAGAAATTAGAAGTAGAGAGAATTCTTCACAAGGAAAGGCGAAGGACAGAGTCGGCAAATACTGCTAATGCAAAGTTGTTACATGAATGTGAAATTCTTCTCAATCGGCTTCAAGAATGTAGTGTTAATTTCCTTGTTGAAGAGGAAGATAAGCTCATCATGGATACTTCATCTCCATCTGATGCTATAGATTTACTGACAACTTCTGACAATCGAATTGGTCTCCTTCTGGCGGAGGCACAGCTCCTCGCCCAGGATGTGGAAAACACTGTTATGGCGGTAGATGAAACTCACAACGTCAATGGTAATGATAGGAAGGCTGATGATGAGCTGAGGAAGATGCTGACAGATCAGTTTGTGGACAATGCTAGATTGAGGATGCAGGTTAACTCGGTAATCCGCTGTGCGTTGTACACAAATATGAAAGCTGAAGAAGATGATGAAGACGGAGATACGCATCTAAGAAAAACTGTTCTAAGCAAATTCTTGGAAAGATGA

Protein Analysis

486

Amino Acids

55.85

Weight (kDa)

5.2

Isoelectric Point (pI)

53.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1333
AccB7I CCANNNNNTGG 2 cut(s) 805, 1219
AciI CCGC 3 cut(s) 1193, 1238, 1360
AclWI GGATC 1 cut(s) 522
AcoI YGGCCR 2 cut(s) 241, 324
AcsI RAATTY 7 cut(s) 46, 53, 73, 916, 981, 1053, 1442
AcuI CTGAAG 2 cut(s) 390, 1410
AfaI GTAC 3 cut(s) 142, 465, 1373
AfiI CCNNNNNNNGG 4 cut(s) 805, 1192, 1213, 1219
AjnI CCWGG 3 cut(s) 118, 798, 1212
AluBI AGCT 7 cut(s) 32, 374, 886, 1114, 1204, 1291, 1388
AluI AGCT 7 cut(s) 32, 374, 886, 1114, 1204, 1291, 1388
Alw26I GTCTC 3 cut(s) 478, 544, 1187
AlwI GGATC 1 cut(s) 522
Ama87I CYCGRG 1 cut(s) 283
AoxI GGCC 2 cut(s) 241, 324
ApeKI GCWGC 3 cut(s) 478, 628, 820
ApoI RAATTY 7 cut(s) 46, 53, 73, 916, 981, 1053, 1442
Asp700I GAANNNNTTC 2 cut(s) 256, 1056
AspLEI GCGC 1 cut(s) 111
AspS9I GGNCC 1 cut(s) 151
AsuC2I CCSGG 1 cut(s) 236
AsuHPI GGTGA 1 cut(s) 350
AsuII TTCGAA 1 cut(s) 250
AvaI CYCGRG 1 cut(s) 283
AvaII GGWCC 1 cut(s) 151
BalI TGGCCA 2 cut(s) 243, 326
BarI GAAGNNNNNNTAC 2 cut(s) 414, 446
BbsI GAAGAC 1 cut(s) 1410
BbvCI CCTCAGC 1 cut(s) 1292
BbvI GCAGC 3 cut(s) 490, 640, 832
BccI CCATC 6 cut(s) 191, 233, 335, 442, 779, 1144
BciT130I CCWGG 3 cut(s) 120, 800, 1214
BciVI GTATCC 1 cut(s) 1117
BcnI CCSGG 1 cut(s) 236
BcoDI GTCTC 3 cut(s) 478, 544, 1187
BfaI CTAG 5 cut(s) 92, 105, 488, 525, 1329
BfmI CTRYAG 1 cut(s) 1146
BfuAI ACCTGC 1 cut(s) 1333
BfuI GTATCC 1 cut(s) 1117
BisI GCNGC 3 cut(s) 479, 629, 821
BlsI GCNGC 3 cut(s) 480, 630, 822
Bme1390I CCNGG 4 cut(s) 120, 236, 800, 1214
Bme18I GGWCC 1 cut(s) 151
BmeT110I CYCGRG 1 cut(s) 283
BmgT120I GGNCC 1 cut(s) 151
BmiI GGNNCC 2 cut(s) 152, 346
BmrFI CCNGG 4 cut(s) 120, 236, 800, 1214
BmsI GCATC 8 cut(s) 166, 689, 735, 799, 1132, 1290, 1329, 1426
BpiI GAAGAC 1 cut(s) 1410
BplI GAGNNNNNCTC 2 cut(s) 155, 187
Bpu10I CCTNAGC 1 cut(s) 1292
Bpu14I TTCGAA 1 cut(s) 250
BpuEI CTTGAG 1 cut(s) 848
BpuMI CCSGG 1 cut(s) 236
BsaBI GATNNNNATC 1 cut(s) 1416
BsaI GGTCTC 1 cut(s) 1187
BsaJI CCNNGG 1 cut(s) 1212
BsaWI WCCGGW 1 cut(s) 69
BsaXI ACNNNNNCTCC 2 cut(s) 1117, 1147
Bsc4I CCNNNNNNNGG 4 cut(s) 805, 1192, 1213, 1219
Bse1I ACTGG 2 cut(s) 82, 135
Bse3DI GCAATG 1 cut(s) 473
Bse8I GATNNNNATC 1 cut(s) 1416
BseBI CCWGG 3 cut(s) 120, 800, 1214
BseDI CCNNGG 1 cut(s) 1212
BseGI GGATG 9 cut(s) 202, 232, 244, 511, 750, 771, 814, 1222, 1344
BseJI GATNNNNATC 1 cut(s) 1416
BseLI CCNNNNNNNGG 4 cut(s) 805, 1192, 1213, 1219
BseMI GCAATG 1 cut(s) 473
BseMII CTCAG 3 cut(s) 429, 720, 1283
BseNI ACTGG 2 cut(s) 82, 135
BseRI GAGGAG 2 cut(s) 455, 1196
BseXI GCAGC 3 cut(s) 490, 640, 832
BshFI GGCC 2 cut(s) 243, 326
BsiHKCI CYCGRG 1 cut(s) 283
BsiSI CCGG 2 cut(s) 70, 235
BslFI GGGAC 2 cut(s) 164, 428
BslI CCNNNNNNNGG 4 cut(s) 805, 1192, 1213, 1219
BsmAI GTCTC 3 cut(s) 478, 544, 1187
BsmFI GGGAC 2 cut(s) 164, 428
BsmI GAATGC 2 cut(s) 7, 748
BsnI GGCC 2 cut(s) 243, 326
Bso31I GGTCTC 1 cut(s) 1187
BsoBI CYCGRG 1 cut(s) 283
Bsp119I TTCGAA 1 cut(s) 250
Bsp1407I TGTACA 1 cut(s) 1371
Bsp143I GATC 4 cut(s) 352, 514, 589, 1309
BspACI CCGC 3 cut(s) 1193, 1238, 1360
BspANI GGCC 2 cut(s) 243, 326
BspCNI CTCAG 3 cut(s) 430, 721, 1284
BspHI TCATGA 2 cut(s) 778, 847
BspLI GGNNCC 2 cut(s) 152, 346
BspMI ACCTGC 1 cut(s) 1333
BspPI GGATC 1 cut(s) 522
BspQI GCTCTTC 1 cut(s) 435
BspT104I TTCGAA 1 cut(s) 250
BspTNI GGTCTC 1 cut(s) 1187
BsrDI GCAATG 1 cut(s) 473
BsrGI TGTACA 1 cut(s) 1371
BsrI ACTGG 2 cut(s) 82, 135
BssECI CCNNGG 1 cut(s) 1212
BssMI GATC 4 cut(s) 352, 514, 589, 1309
Bst2UI CCWGG 3 cut(s) 120, 800, 1214
Bst4CI ACNGT 3 cut(s) 637, 1231, 1432
Bst6I CTCTTC 5 cut(s) 192, 435, 846, 915, 1095
BstAPI GCANNNNNTGC 1 cut(s) 1022
BstAUI TGTACA 1 cut(s) 1371
BstBI TTCGAA 1 cut(s) 250
BstDEI CTNAG 9 cut(s) 28, 418, 438, 729, 816, 944, 1292, 1421, 1436
BstENI CCTNNNNNAGG 1 cut(s) 1211
BstF5I GGATG 9 cut(s) 202, 232, 244, 511, 750, 771, 814, 1222, 1344
BstHHI GCGC 1 cut(s) 111
BstKTI GATC 4 cut(s) 355, 517, 592, 1312
BstMAI GTCTC 3 cut(s) 478, 544, 1187
BstMBI GATC 4 cut(s) 352, 514, 589, 1309
BstMWI GCNNNNNNNGC 4 cut(s) 106, 115, 380, 1022
BstNI CCWGG 3 cut(s) 120, 800, 1214
BstNSI RCATGY 1 cut(s) 628
BstSCI CCNGG 4 cut(s) 118, 234, 798, 1212
BstSFI CTRYAG 1 cut(s) 1146
BstV1I GCAGC 3 cut(s) 490, 640, 832
BstV2I GAAGAC 1 cut(s) 1410
BstX2I RGATCY 1 cut(s) 514
BstYI RGATCY 1 cut(s) 514
BsuI GTATCC 1 cut(s) 1117
BsuRI GGCC 2 cut(s) 243, 326
BtsCI GGATG 9 cut(s) 202, 232, 244, 511, 750, 771, 814, 1222, 1344
BtsI GCAGTG 1 cut(s) 677
BtsIMutI CAGTG 2 cut(s) 677, 1227
BveI ACCTGC 1 cut(s) 1333
CciI TCATGA 2 cut(s) 778, 847
CfoI GCGC 1 cut(s) 111
Cfr13I GGNCC 1 cut(s) 151
Csp6I GTAC 3 cut(s) 141, 464, 1372
CspCI CAANNNNNGTGG 2 cut(s) 653, 688
CviAII CATG 7 cut(s) 23, 245, 625, 779, 848, 1043, 1120
CviQI GTAC 3 cut(s) 141, 464, 1372
DdeI CTNAG 9 cut(s) 28, 418, 438, 729, 816, 944, 1292, 1421, 1436
DpnI GATC 4 cut(s) 354, 516, 591, 1311
DpnII GATC 4 cut(s) 352, 514, 589, 1309
EaeI YGGCCR 2 cut(s) 241, 324
Eam1104I CTCTTC 5 cut(s) 192, 435, 846, 915, 1095
EarI CTCTTC 5 cut(s) 192, 435, 846, 915, 1095
EciI GGCGGA 1 cut(s) 1208
Eco31I GGTCTC 1 cut(s) 1187
Eco47I GGWCC 1 cut(s) 151
Eco57I CTGAAG 2 cut(s) 390, 1410
Eco88I CYCGRG 1 cut(s) 283
EcoNI CCTNNNNNAGG 1 cut(s) 1211
EcoRI GAATTC 2 cut(s) 916, 981
EcoRII CCWGG 3 cut(s) 118, 798, 1212
EcoT22I ATGCAT 1 cut(s) 750
FaeI CATG 7 cut(s) 26, 248, 628, 782, 851, 1046, 1123
FaqI GGGAC 2 cut(s) 164, 428
FatI CATG 7 cut(s) 22, 244, 624, 778, 847, 1042, 1119
Fnu4HI GCNGC 3 cut(s) 479, 629, 821
FokI GGATG 9 cut(s) 209, 239, 251, 518, 757, 758, 821, 1229, 1351
Fsp4HI GCNGC 3 cut(s) 479, 629, 821
FspBI CTAG 5 cut(s) 92, 105, 488, 525, 1329
GlaI GCGC 1 cut(s) 110
GluI GCNGC 3 cut(s) 479, 629, 821
HaeIII GGCC 2 cut(s) 243, 326
HapII CCGG 2 cut(s) 70, 235
HhaI GCGC 1 cut(s) 111
Hin1II CATG 7 cut(s) 26, 248, 628, 782, 851, 1046, 1123
Hin6I GCGC 1 cut(s) 109
HinP1I GCGC 1 cut(s) 109
HincII GTYRAC 2 cut(s) 759, 1348
HindII GTYRAC 2 cut(s) 759, 1348
HinfI GANTC 7 cut(s) 35, 281, 532, 713, 755, 860, 1010
HpaI GTTAAC 1 cut(s) 1348
HpaII CCGG 2 cut(s) 70, 235
HphI GGTGA 1 cut(s) 350
Hpy166II GTNNAC 5 cut(s) 660, 759, 1321, 1348, 1374
Hpy188III TCNNGA 5 cut(s) 536, 593, 779, 848, 1073
Hpy8I GTNNAC 5 cut(s) 660, 759, 1321, 1348, 1374
HpyAV CCTTC 5 cut(s) 246, 785, 996, 1196, 1270
HpyCH4III ACNGT 3 cut(s) 637, 1231, 1432
HpyCH4IV ACGT 1 cut(s) 1257
HpyCH4V TGCA 8 cut(s) 359, 478, 628, 670, 748, 838, 1031, 1342
HpyF10VI GCNNNNNNNGC 4 cut(s) 106, 115, 380, 1022
HpyF3I CTNAG 9 cut(s) 28, 418, 438, 729, 816, 944, 1292, 1421, 1436
HpySE526I ACGT 1 cut(s) 1257
Hsp92II CATG 7 cut(s) 26, 248, 628, 782, 851, 1046, 1123
HspAI GCGC 1 cut(s) 109
KspAI GTTAAC 1 cut(s) 1348
Kzo9I GATC 4 cut(s) 352, 514, 589, 1309
LguI GCTCTTC 1 cut(s) 435
LmnI GCTCC 5 cut(s) 4, 350, 379, 442, 1209
Lsp1109I GCAGC 3 cut(s) 490, 640, 832
LweI GCATC 8 cut(s) 166, 689, 735, 799, 1132, 1290, 1329, 1426
MaeI CTAG 5 cut(s) 92, 105, 488, 525, 1329
MaeII ACGT 1 cut(s) 1257
MaeIII GTNAC 2 cut(s) 278, 1038
MalI GATC 4 cut(s) 354, 516, 591, 1311
MboI GATC 4 cut(s) 352, 514, 589, 1309
MflI RGATCY 1 cut(s) 514
MlsI TGGCCA 2 cut(s) 243, 326
MluNI TGGCCA 2 cut(s) 243, 326
MlyI GAGTC 4 cut(s) 275, 764, 869, 1019
MmeI TCCRAC 1 cut(s) 786
Mox20I TGGCCA 2 cut(s) 243, 326
Mph1103I ATGCAT 1 cut(s) 750
MroXI GAANNNNTTC 2 cut(s) 256, 1056
MscI TGGCCA 2 cut(s) 243, 326
MseI TTAA 8 cut(s) 300, 401, 455, 641, 722, 894, 1086, 1347
MslI CAYNNNNRTG 4 cut(s) 783, 1047, 1232, 1379
Msp20I TGGCCA 2 cut(s) 243, 326
MspA1I CMGCKG 1 cut(s) 1362
MspI CCGG 2 cut(s) 70, 235
MspR9I CCNGG 4 cut(s) 120, 236, 800, 1214
Mva1269I GAATGC 2 cut(s) 7, 748
MvaI CCWGG 3 cut(s) 120, 800, 1214
MwoI GCNNNNNNNGC 4 cut(s) 106, 115, 380, 1022
NciI CCSGG 1 cut(s) 236
NdeII GATC 4 cut(s) 352, 514, 589, 1309
NlaIII CATG 7 cut(s) 26, 248, 628, 782, 851, 1046, 1123
NlaIV GGNNCC 2 cut(s) 152, 346
NmuCI GTSAC 1 cut(s) 278
NsiI ATGCAT 1 cut(s) 750
NspI RCATGY 1 cut(s) 628
NspV TTCGAA 1 cut(s) 250
PaeR7I CTCGAG 1 cut(s) 283
PagI TCATGA 2 cut(s) 778, 847
PciSI GCTCTTC 1 cut(s) 435
PctI GAATGC 2 cut(s) 7, 748
PdmI GAANNNNTTC 2 cut(s) 256, 1056
PfeI GAWTC 3 cut(s) 35, 532, 713
PflFI GACNNNGTC 1 cut(s) 1009
PflMI CCANNNNNTGG 2 cut(s) 805, 1219
PkrI GCNGC 3 cut(s) 480, 630, 822
PleI GAGTC 4 cut(s) 275, 763, 868, 1018
PpsI GAGTC 4 cut(s) 275, 763, 868, 1018
Psp6I CCWGG 3 cut(s) 118, 798, 1212
PspGI CCWGG 3 cut(s) 118, 798, 1212
PspN4I GGNNCC 2 cut(s) 152, 346
PspPI GGNCC 1 cut(s) 151
PspXI VCTCGAGB 1 cut(s) 283
PsuI RGATCY 1 cut(s) 514
PsyI GACNNNGTC 1 cut(s) 1009
RsaI GTAC 3 cut(s) 142, 465, 1373
RsaNI GTAC 3 cut(s) 141, 464, 1372
RseI CAYNNNNRTG 4 cut(s) 783, 1047, 1232, 1379
SapI GCTCTTC 1 cut(s) 435
SaqAI TTAA 8 cut(s) 300, 401, 455, 641, 722, 894, 1086, 1347
SatI GCNGC 3 cut(s) 479, 629, 821
Sau3AI GATC 4 cut(s) 352, 514, 589, 1309
Sau96I GGNCC 1 cut(s) 151
SchI GAGTC 4 cut(s) 275, 764, 869, 1019
ScrFI CCNGG 4 cut(s) 120, 236, 800, 1214
SfaNI GCATC 8 cut(s) 166, 689, 735, 799, 1132, 1290, 1329, 1426
SfcI CTRYAG 1 cut(s) 1146
Sfr274I CTCGAG 1 cut(s) 283
SfuI TTCGAA 1 cut(s) 250
SinI GGWCC 1 cut(s) 151
SlaI CTCGAG 1 cut(s) 283
SmiMI CAYNNNNRTG 4 cut(s) 783, 1047, 1232, 1379
SmlI CTYRAG 2 cut(s) 283, 827
SmoI CTYRAG 2 cut(s) 283, 827
SsiI CCGC 3 cut(s) 1193, 1238, 1360
SspMI CTAG 5 cut(s) 92, 105, 488, 525, 1329
StyD4I CCNGG 4 cut(s) 118, 234, 798, 1212
TaaI ACNGT 3 cut(s) 637, 1231, 1432
TaiI ACGT 1 cut(s) 1260
TaqI TCGA 4 cut(s) 250, 284, 949, 1174
TaqII GACCGA 1 cut(s) 168
TatI WGTACW 2 cut(s) 140, 1371
TfiI GAWTC 3 cut(s) 35, 532, 713
Tru1I TTAA 8 cut(s) 300, 401, 455, 641, 722, 894, 1086, 1347
Tru9I TTAA 8 cut(s) 300, 401, 455, 641, 722, 894, 1086, 1347
TscAI CASTG 2 cut(s) 677, 1234
TseFI GTSAC 1 cut(s) 278
TseI GCWGC 3 cut(s) 478, 628, 820
Tsp45I GTSAC 1 cut(s) 278
TspDTI ATGAA 9 cut(s) 318, 767, 864, 971, 1059, 1119, 1260, 1397, 1416
TspGWI ACGGA 4 cut(s) 278, 518, 680, 1422
TspRI CASTG 2 cut(s) 677, 1234
Tth111I GACNNNGTC 1 cut(s) 1009
Van91I CCANNNNNTGG 2 cut(s) 805, 1219
VpaK11BI GGWCC 1 cut(s) 151
XagI CCTNNNNNAGG 1 cut(s) 1211
XapI RAATTY 7 cut(s) 46, 53, 73, 916, 981, 1053, 1442
XceI RCATGY 1 cut(s) 628
XhoI CTCGAG 1 cut(s) 283
XmnI GAANNNNTTC 2 cut(s) 256, 1056
XspI CTAG 5 cut(s) 92, 105, 488, 525, 1329
Zsp2I ATGCAT 1 cut(s) 750
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.