Amino acid transporter
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G80510 |
| fragaria_vesca | FvH4_6g29140 |
| malus_domestica | MD17G1217500.v1.1 |
| prunus_persica | Prupe.3G093200_v2.0.a1 |
| pyrus_communis | pycom17g22180 |
| rosa_chinensis | RchiOBHm_Chr2g0134331 |
| rosa_laevigata | RLG00000019386 |
| rosa_multiflora | Rmu_sc0014586.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00110320 |
| rosa_rugosa | Rorug02G0316100 |
| rosa_samantha | Rh2AG368800 Rh2BG374800 Rh2CG352500 Rh2DG392100 |
| rosa_wichuraiana | Rw2G030050 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 313 |
| AccB1I | GGYRCC | 1 cut(s) | 649 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1275 |
| AccI | GTMKAC | 1 cut(s) | 809 |
| AccII | CGCG | 1 cut(s) | 749 |
| AciI | CCGC | 2 cut(s) | 162, 254 |
| AclWI | GGATC | 4 cut(s) | 612, 950, 1186, 1261 |
| AcsI | RAATTY | 1 cut(s) | 142 |
| AcuI | CTGAAG | 1 cut(s) | 678 |
| AcyI | GRCGYC | 1 cut(s) | 1161 |
| AfaI | GTAC | 2 cut(s) | 38, 1100 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 803, 1275, 1401 |
| AgsI | TTSAA | 7 cut(s) | 87, 148, 386, 443, 767, 884, 905 |
| AjnI | CCWGG | 1 cut(s) | 461 |
| AluBI | AGCT | 8 cut(s) | 20, 126, 687, 698, 710, 760, 901, 1068 |
| AluI | AGCT | 8 cut(s) | 20, 126, 687, 698, 710, 760, 901, 1068 |
| Alw21I | GWGCWC | 1 cut(s) | 451 |
| Alw26I | GTCTC | 2 cut(s) | 918, 1469 |
| Alw44I | GTGCAC | 1 cut(s) | 447 |
| AlwI | GGATC | 4 cut(s) | 612, 950, 1186, 1261 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1022 |
| AoxI | GGCC | 2 cut(s) | 458, 907 |
| ApaLI | GTGCAC | 1 cut(s) | 447 |
| ApeKI | GCWGC | 1 cut(s) | 698 |
| ApoI | RAATTY | 1 cut(s) | 142 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 582, 614 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 126 |
| AspLEI | GCGC | 2 cut(s) | 662, 743 |
| AspS9I | GGNCC | 1 cut(s) | 459 |
| AsuC2I | CCSGG | 1 cut(s) | 250 |
| AsuHPI | GGTGA | 6 cut(s) | 176, 406, 548, 786, 850, 1173 |
| BaeGI | GKGCMC | 1 cut(s) | 451 |
| BanI | GGYRCC | 1 cut(s) | 649 |
| BbsI | GAAGAC | 1 cut(s) | 1397 |
| Bbv12I | GWGCWC | 1 cut(s) | 451 |
| BbvI | GCAGC | 1 cut(s) | 685 |
| BccI | CCATC | 3 cut(s) | 152, 352, 567 |
| BceAI | ACGGC | 1 cut(s) | 1295 |
| BciT130I | CCWGG | 1 cut(s) | 463 |
| BcnI | CCSGG | 1 cut(s) | 250 |
| BcoDI | GTCTC | 2 cut(s) | 918, 1469 |
| BfaI | CTAG | 1 cut(s) | 131 |
| BfuAI | ACCTGC | 1 cut(s) | 313 |
| BglII | AGATCT | 1 cut(s) | 480 |
| BisI | GCNGC | 1 cut(s) | 699 |
| BlpI | GCTNAGC | 1 cut(s) | 1069 |
| BlsI | GCNGC | 1 cut(s) | 700 |
| Bme1390I | CCNGG | 2 cut(s) | 250, 463 |
| BmgT120I | GGNCC | 1 cut(s) | 459 |
| BmiI | GGNNCC | 1 cut(s) | 651 |
| BmrFI | CCNGG | 2 cut(s) | 250, 463 |
| BmrI | ACTGGG | 1 cut(s) | 461 |
| BmsI | GCATC | 1 cut(s) | 428 |
| BmuI | ACTGGG | 1 cut(s) | 461 |
| BpiI | GAAGAC | 1 cut(s) | 1397 |
| BpmI | CTGGAG | 1 cut(s) | 484 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1069 |
| BpuEI | CTTGAG | 3 cut(s) | 703, 1165, 1396 |
| BpuMI | CCSGG | 1 cut(s) | 250 |
| Bsa29I | ATCGAT | 1 cut(s) | 275 |
| BsaAI | YACGTR | 1 cut(s) | 40 |
| BsaBI | GATNNNNATC | 2 cut(s) | 180, 845 |
| BsaHI | GRCGYC | 1 cut(s) | 1161 |
| BsaI | GGTCTC | 1 cut(s) | 918 |
| BsaJI | CCNNGG | 7 cut(s) | 249, 461, 663, 785, 813, 1051, 1164 |
| BsaWI | WCCGGW | 1 cut(s) | 796 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 803, 1275, 1401 |
| Bse118I | RCCGGY | 1 cut(s) | 909 |
| Bse1I | ACTGG | 2 cut(s) | 456, 1230 |
| Bse3DI | GCAATG | 2 cut(s) | 984, 1341 |
| Bse8I | GATNNNNATC | 2 cut(s) | 180, 845 |
| BseBI | CCWGG | 1 cut(s) | 463 |
| BseCI | ATCGAT | 1 cut(s) | 275 |
| BseDI | CCNNGG | 7 cut(s) | 249, 461, 663, 785, 813, 1051, 1164 |
| BseGI | GGATG | 1 cut(s) | 795 |
| BseJI | GATNNNNATC | 2 cut(s) | 180, 845 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 803, 1275, 1401 |
| BseMI | GCAATG | 2 cut(s) | 984, 1341 |
| BseMII | CTCAG | 2 cut(s) | 1083, 1480 |
| BseNI | ACTGG | 2 cut(s) | 456, 1230 |
| BseRI | GAGGAG | 2 cut(s) | 906, 1176 |
| BseSI | GKGCMC | 1 cut(s) | 451 |
| BseXI | GCAGC | 1 cut(s) | 685 |
| BseYI | CCCAGC | 2 cut(s) | 287, 1234 |
| Bsh1236I | CGCG | 1 cut(s) | 749 |
| BshFI | GGCC | 2 cut(s) | 460, 909 |
| BshNI | GGYRCC | 1 cut(s) | 649 |
| BshVI | ATCGAT | 1 cut(s) | 275 |
| BsiHKAI | GWGCWC | 1 cut(s) | 451 |
| BsiSI | CCGG | 3 cut(s) | 249, 797, 910 |
| BsiWI | CGTACG | 1 cut(s) | 36 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 803, 1275, 1401 |
| BsmAI | GTCTC | 2 cut(s) | 918, 1469 |
| BsmI | GAATGC | 1 cut(s) | 618 |
| BsnI | GGCC | 2 cut(s) | 460, 909 |
| Bso31I | GGTCTC | 1 cut(s) | 918 |
| Bsp1286I | GDGCHC | 1 cut(s) | 451 |
| Bsp143I | GATC | 8 cut(s) | 276, 480, 577, 604, 942, 966, 1178, 1253 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1069 |
| BspACI | CCGC | 2 cut(s) | 162, 254 |
| BspANI | GGCC | 2 cut(s) | 460, 909 |
| BspCNI | CTCAG | 2 cut(s) | 1082, 1479 |
| BspDI | ATCGAT | 1 cut(s) | 275 |
| BspFNI | CGCG | 1 cut(s) | 749 |
| BspHI | TCATGA | 1 cut(s) | 849 |
| BspLI | GGNNCC | 1 cut(s) | 651 |
| BspMI | ACCTGC | 1 cut(s) | 313 |
| BspPI | GGATC | 4 cut(s) | 612, 950, 1186, 1261 |
| BspT107I | GGYRCC | 1 cut(s) | 649 |
| BspTNI | GGTCTC | 1 cut(s) | 918 |
| BsrDI | GCAATG | 2 cut(s) | 984, 1341 |
| BsrFI | RCCGGY | 1 cut(s) | 909 |
| BsrI | ACTGG | 2 cut(s) | 456, 1230 |
| BssAI | RCCGGY | 1 cut(s) | 909 |
| BssECI | CCNNGG | 7 cut(s) | 249, 461, 663, 785, 813, 1051, 1164 |
| BssMI | GATC | 8 cut(s) | 276, 480, 577, 604, 942, 966, 1178, 1253 |
| BssNI | GRCGYC | 1 cut(s) | 1161 |
| BssT1I | CCWWGG | 5 cut(s) | 663, 785, 813, 1051, 1164 |
| Bst2UI | CCWGG | 1 cut(s) | 463 |
| Bst4CI | ACNGT | 3 cut(s) | 952, 1156, 1261 |
| Bst6I | CTCTTC | 1 cut(s) | 1199 |
| BstACI | GRCGYC | 1 cut(s) | 1161 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1307 |
| BstBAI | YACGTR | 1 cut(s) | 40 |
| BstC8I | GCNNGC | 1 cut(s) | 739 |
| BstDEI | CTNAG | 3 cut(s) | 27, 1069, 1466 |
| BstF5I | GGATG | 1 cut(s) | 795 |
| BstFNI | CGCG | 1 cut(s) | 749 |
| BstHHI | GCGC | 2 cut(s) | 662, 743 |
| BstKTI | GATC | 8 cut(s) | 279, 483, 580, 607, 945, 969, 1181, 1256 |
| BstMAI | GTCTC | 2 cut(s) | 918, 1469 |
| BstMBI | GATC | 8 cut(s) | 276, 480, 577, 604, 942, 966, 1178, 1253 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 305, 707, 1307 |
| BstNI | CCWGG | 1 cut(s) | 463 |
| BstSCI | CCNGG | 2 cut(s) | 248, 461 |
| BstSLI | GKGCMC | 1 cut(s) | 451 |
| BstUI | CGCG | 1 cut(s) | 749 |
| BstV1I | GCAGC | 1 cut(s) | 685 |
| BstV2I | GAAGAC | 1 cut(s) | 1397 |
| BstX2I | RGATCY | 2 cut(s) | 480, 1253 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 566 |
| BstYI | RGATCY | 2 cut(s) | 480, 1253 |
| Bsu15I | ATCGAT | 1 cut(s) | 275 |
| BsuRI | GGCC | 2 cut(s) | 460, 909 |
| BsuTUI | ATCGAT | 1 cut(s) | 275 |
| BtsCI | GGATG | 1 cut(s) | 795 |
| BtsIMutI | CAGTG | 4 cut(s) | 449, 1073, 1161, 1223 |
| BveI | ACCTGC | 1 cut(s) | 313 |
| Cac8I | GCNNGC | 1 cut(s) | 739 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1022 |
| CciI | TCATGA | 1 cut(s) | 849 |
| CfoI | GCGC | 2 cut(s) | 662, 743 |
| Cfr10I | RCCGGY | 1 cut(s) | 909 |
| Cfr13I | GGNCC | 1 cut(s) | 459 |
| ClaI | ATCGAT | 1 cut(s) | 275 |
| CseI | GACGC | 1 cut(s) | 1169 |
| Csp6I | GTAC | 2 cut(s) | 37, 1099 |
| CviAII | CATG | 6 cut(s) | 313, 593, 850, 1192, 1401, 1408 |
| CviQI | GTAC | 2 cut(s) | 37, 1099 |
| DdeI | CTNAG | 3 cut(s) | 27, 1069, 1466 |
| DpnI | GATC | 8 cut(s) | 278, 482, 579, 606, 944, 968, 1180, 1255 |
| DpnII | GATC | 8 cut(s) | 276, 480, 577, 604, 942, 966, 1178, 1253 |
| DraI | TTTAAA | 1 cut(s) | 1350 |
| Eam1104I | CTCTTC | 1 cut(s) | 1199 |
| EarI | CTCTTC | 1 cut(s) | 1199 |
| Eco130I | CCWWGG | 5 cut(s) | 663, 785, 813, 1051, 1164 |
| Eco31I | GGTCTC | 1 cut(s) | 918 |
| Eco32I | GATATC | 1 cut(s) | 995 |
| Eco57I | CTGAAG | 1 cut(s) | 678 |
| EcoO109I | RGGNCCY | 1 cut(s) | 459 |
| EcoRII | CCWGG | 1 cut(s) | 461 |
| EcoRV | GATATC | 1 cut(s) | 995 |
| EcoT14I | CCWWGG | 5 cut(s) | 663, 785, 813, 1051, 1164 |
| ErhI | CCWWGG | 5 cut(s) | 663, 785, 813, 1051, 1164 |
| FaeI | CATG | 6 cut(s) | 316, 596, 853, 1195, 1404, 1411 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 806, 838 |
| FatI | CATG | 6 cut(s) | 312, 592, 849, 1191, 1400, 1407 |
| FblI | GTMKAC | 1 cut(s) | 809 |
| Fnu4HI | GCNGC | 1 cut(s) | 699 |
| FokI | GGATG | 1 cut(s) | 802 |
| Fsp4HI | GCNGC | 1 cut(s) | 699 |
| FspBI | CTAG | 1 cut(s) | 131 |
| GlaI | GCGC | 2 cut(s) | 661, 742 |
| GluI | GCNGC | 1 cut(s) | 699 |
| GsaI | CCCAGC | 2 cut(s) | 291, 1238 |
| GsuI | CTGGAG | 1 cut(s) | 484 |
| HaeIII | GGCC | 2 cut(s) | 460, 909 |
| HapII | CCGG | 3 cut(s) | 249, 797, 910 |
| HgaI | GACGC | 1 cut(s) | 1169 |
| HhaI | GCGC | 2 cut(s) | 662, 743 |
| Hin1I | GRCGYC | 1 cut(s) | 1161 |
| Hin1II | CATG | 6 cut(s) | 316, 596, 853, 1195, 1404, 1411 |
| Hin6I | GCGC | 2 cut(s) | 660, 741 |
| HinP1I | GCGC | 2 cut(s) | 660, 741 |
| HincII | GTYRAC | 1 cut(s) | 810 |
| HindII | GTYRAC | 1 cut(s) | 810 |
| HindIII | AAGCTT | 2 cut(s) | 124, 758 |
| HpaII | CCGG | 3 cut(s) | 249, 797, 910 |
| HphI | GGTGA | 6 cut(s) | 176, 406, 548, 786, 850, 1173 |
| Hpy166II | GTNNAC | 5 cut(s) | 449, 554, 810, 1159, 1293 |
| Hpy188III | TCNNGA | 5 cut(s) | 131, 185, 240, 268, 850 |
| Hpy8I | GTNNAC | 5 cut(s) | 449, 554, 810, 1159, 1293 |
| HpyAV | CCTTC | 6 cut(s) | 310, 761, 899, 933, 1344, 1364 |
| HpyCH4III | ACNGT | 3 cut(s) | 952, 1156, 1261 |
| HpyCH4IV | ACGT | 1 cut(s) | 39 |
| HpyCH4V | TGCA | 7 cut(s) | 49, 449, 486, 503, 716, 960, 989 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 305, 707, 1307 |
| HpyF3I | CTNAG | 3 cut(s) | 27, 1069, 1466 |
| HpySE526I | ACGT | 1 cut(s) | 39 |
| Hsp92I | GRCGYC | 1 cut(s) | 1161 |
| Hsp92II | CATG | 6 cut(s) | 316, 596, 853, 1195, 1404, 1411 |
| HspAI | GCGC | 2 cut(s) | 660, 741 |
| Kzo9I | GATC | 8 cut(s) | 276, 480, 577, 604, 942, 966, 1178, 1253 |
| Lsp1109I | GCAGC | 1 cut(s) | 685 |
| LweI | GCATC | 1 cut(s) | 428 |
| MaeI | CTAG | 1 cut(s) | 131 |
| MaeII | ACGT | 1 cut(s) | 39 |
| MaeIII | GTNAC | 2 cut(s) | 792, 869 |
| MalI | GATC | 8 cut(s) | 278, 482, 579, 606, 944, 968, 1180, 1255 |
| MboI | GATC | 8 cut(s) | 276, 480, 577, 604, 942, 966, 1178, 1253 |
| MboII | GAAGA | 3 cut(s) | 682, 1216, 1402 |
| MflI | RGATCY | 2 cut(s) | 480, 1253 |
| MhlI | GDGCHC | 1 cut(s) | 451 |
| MlyI | GAGTC | 2 cut(s) | 671, 1028 |
| MmeI | TCCRAC | 4 cut(s) | 456, 916, 1340, 1420 |
| MroXI | GAANNNNTTC | 1 cut(s) | 126 |
| MseI | TTAA | 6 cut(s) | 212, 261, 756, 876, 1287, 1349 |
| MslI | CAYNNNNRTG | 1 cut(s) | 876 |
| MspA1I | CMGCKG | 1 cut(s) | 698 |
| MspI | CCGG | 3 cut(s) | 249, 797, 910 |
| MspR9I | CCNGG | 2 cut(s) | 250, 463 |
| Mva1269I | GAATGC | 1 cut(s) | 618 |
| MvaI | CCWGG | 1 cut(s) | 463 |
| MvnI | CGCG | 1 cut(s) | 749 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 305, 707, 1307 |
| NciI | CCSGG | 1 cut(s) | 250 |
| NdeII | GATC | 8 cut(s) | 276, 480, 577, 604, 942, 966, 1178, 1253 |
| NlaIII | CATG | 6 cut(s) | 316, 596, 853, 1195, 1404, 1411 |
| NlaIV | GGNNCC | 1 cut(s) | 651 |
| NmuCI | GTSAC | 2 cut(s) | 792, 869 |
| PagI | TCATGA | 1 cut(s) | 849 |
| PctI | GAATGC | 1 cut(s) | 618 |
| PdmI | GAANNNNTTC | 1 cut(s) | 126 |
| PfeI | GAWTC | 9 cut(s) | 62, 134, 243, 469, 779, 841, 928, 1056, 1264 |
| Pfl23II | CGTACG | 1 cut(s) | 36 |
| PflFI | GACNNNGTC | 1 cut(s) | 1396 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1275 |
| PkrI | GCNGC | 1 cut(s) | 700 |
| PleI | GAGTC | 2 cut(s) | 671, 1027 |
| PpsI | GAGTC | 2 cut(s) | 671, 1027 |
| Ppu21I | YACGTR | 1 cut(s) | 40 |
| Psp6I | CCWGG | 1 cut(s) | 461 |
| PspFI | CCCAGC | 2 cut(s) | 287, 1234 |
| PspGI | CCWGG | 1 cut(s) | 461 |
| PspLI | CGTACG | 1 cut(s) | 36 |
| PspN4I | GGNNCC | 1 cut(s) | 651 |
| PspPI | GGNCC | 1 cut(s) | 459 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1022 |
| PsuI | RGATCY | 2 cut(s) | 480, 1253 |
| PsyI | GACNNNGTC | 1 cut(s) | 1396 |
| PvuII | CAGCTG | 1 cut(s) | 698 |
| RsaI | GTAC | 2 cut(s) | 38, 1100 |
| RsaNI | GTAC | 2 cut(s) | 37, 1099 |
| RseI | CAYNNNNRTG | 1 cut(s) | 876 |
| SalI | GTCGAC | 1 cut(s) | 808 |
| SaqAI | TTAA | 6 cut(s) | 212, 261, 756, 876, 1287, 1349 |
| SatI | GCNGC | 1 cut(s) | 699 |
| Sau3AI | GATC | 8 cut(s) | 276, 480, 577, 604, 942, 966, 1178, 1253 |
| Sau96I | GGNCC | 1 cut(s) | 459 |
| SchI | GAGTC | 2 cut(s) | 671, 1028 |
| ScrFI | CCNGG | 2 cut(s) | 250, 463 |
| SduI | GDGCHC | 1 cut(s) | 451 |
| SfaNI | GCATC | 1 cut(s) | 428 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 876 |
| SmlI | CTYRAG | 3 cut(s) | 682, 1144, 1375 |
| SmoI | CTYRAG | 3 cut(s) | 682, 1144, 1375 |
| SsiI | CCGC | 2 cut(s) | 162, 254 |
| SspI | AATATT | 1 cut(s) | 1456 |
| SspMI | CTAG | 1 cut(s) | 131 |
| StyD4I | CCNGG | 2 cut(s) | 248, 461 |
| StyI | CCWWGG | 5 cut(s) | 663, 785, 813, 1051, 1164 |
| TaaI | ACNGT | 3 cut(s) | 952, 1156, 1261 |
| TaiI | ACGT | 1 cut(s) | 42 |
| TaqI | TCGA | 6 cut(s) | 174, 192, 275, 576, 610, 809 |
| TfiI | GAWTC | 9 cut(s) | 62, 134, 243, 469, 779, 841, 928, 1056, 1264 |
| Tru1I | TTAA | 6 cut(s) | 212, 261, 756, 876, 1287, 1349 |
| Tru9I | TTAA | 6 cut(s) | 212, 261, 756, 876, 1287, 1349 |
| TscAI | CASTG | 4 cut(s) | 456, 1080, 1161, 1230 |
| TseFI | GTSAC | 2 cut(s) | 792, 869 |
| TseI | GCWGC | 1 cut(s) | 698 |
| Tsp45I | GTSAC | 2 cut(s) | 792, 869 |
| TspDTI | ATGAA | 3 cut(s) | 329, 941, 1396 |
| TspGWI | ACGGA | 1 cut(s) | 1049 |
| TspRI | CASTG | 4 cut(s) | 456, 1080, 1161, 1230 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1396 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1275 |
| VneI | GTGCAC | 1 cut(s) | 447 |
| XapI | RAATTY | 1 cut(s) | 142 |
| XbaI | TCTAGA | 1 cut(s) | 130 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 820 |
| XmiI | GTMKAC | 1 cut(s) | 809 |
| XmnI | GAANNNNTTC | 1 cut(s) | 126 |
| XspI | CTAG | 1 cut(s) | 131 |