MD17G1278700.v1.1

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0017589
Physical Location & Seq
Reverse (-)
33858846 .. 33860395
1550 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1278700.v1.1.491

Sequence Viewer

Length: 1530 bp
ATGCGCAGGTTAGACAAAACCTCGCTCCTAACAAACTACCGCCAGCTTTGTACGCTTCCGGCAGCCAGTCTCCCTGCATCCTATAACATTCTGTCATGTAACAGAAAGATTGCAGAGTGCGTGAGAAATGACCAAACGCCAAGTGCACAGGACCTGTTCGATCAAATGCCCGTGAGAGACGTCGTTTCGTGGAACACCATGTTGTCGGGTTTGCAGAAGGCCAAAAACCCACACGGAGTTAATCGATGTTTCTTGCAAATGACAAGAGATGGATTCAGACCAAACGAGTACACTGTCTCGATAGTACTCAACGCGTTTTTGGGCACAGCGTTTAATGTTTTGGTCTCGCAGGTTCATGCCGTTGTAGTCCGCTTGGCGCTCAACTCGAGTGTGTTTGTTGGGTCAGCGCTGATGAAAGGGTACGCAAATGCGGGCAATCGGGTAGCTTTGAGCGGAGTGTTTGATGAGATTTCAGTGAAGGATGTCTCGTCTTGGAACGCTTTGGTTTCGAGTTACATGGAATTGGGGTGCATCCATGAGGCTCAGACAGTTTTTGATGGGATGTTGGAAAGGAACGTTGTTTCGTGGACTAGTCTGGTGAATGGTTATATCAGCAATAAGAGGGTTAACAAAGCTCGCTCTGTTTTCGACAAGATGAGTGAAAAGAATGTGGTTTCATGGACTGTTATGATCAGTGGGTACGTGAGAAGCCATAAATTTGTGGATGCTTTGGATCTTTTCCTCTTAATGTTGAAATCGGGGACTCGGCCAAACCATTTTACCTTTTCAAGCGTGTTGGATGCATGTGCTGGTTGTTCTTCACTTGTCTTGGGACAGCAAGTTCACTCGAGCATCTTAAAGTTCGGTGTGCCAGAGGACGTCATCATGTCAACCTCACTTGTTGACATGTACGCAAAATGTGGAGACATTGGCGCGGCACTATGCATTTTCAGATCAATGCCAAGGAAAAACCTGGTGACATGGAATTCGATAATAGGAGGTTATGCCAGGCACGGACTCGCTACAAGAGCATTGGAGGAGTTTCAGAGCATGACCGAGTGCGGTTGTAGGCCTGACGAAGTAACGTTTGTAAACCTGTTATCGGCTTGTGGGCATGGCGGGATGGTTGAAAAAGGCAAAATCCTATTTAACTCCATGAAAGCAAAGTTCGGAGTTGAACCAAAGGTCGAGCACTATGCTTGCATGGTTGACCTATATGGGAGAGCAGGTGAGCTAGAGGAAGCCGAGAAGTTGATACAAGGGATGCCATTTCAGCCGGATGTGGTGGTTTGGGTCGCATTGCTTGGTGCATGTGGCTTGCATTCAAGTCTCGAACTTGGCGAGTTGGCTGCTACAGAAATTGACAAACTGGGACATGCCCATCCCGCAGGATATTCGACGCTTTCAAAGATTCACGGCGAAAGAGGAGCATGGAACAGCGTCCAAGAGTTTAGGAAGACGATGCAAGAGAAAGGCATTCGAAAGCAGAACGCCGGTAGCTGGGTCGAATCTCCACAAGGAATGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

510

Amino Acids

55.98

Weight (kDa)

8.56

Isoelectric Point (pI)

44.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 59 - 106 4.6e-11 PPR repeat family
PPR_2 PF13041 191 - 224 8.9e-07 PPR repeat family
PPR PF01535 194 - 224 1.8e-06 PPR repeat
PPR_2 PF13041 222 - 270 3.8e-13 PPR repeat family
PPR PF01535 225 - 254 2.4e-06 PPR repeat
PPR_2 PF13041 324 - 371 1.1e-10 PPR repeat family
E_motif PF20431 441 - 503 1.3e-08 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017589)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g26830 FvH4_1g26830
malus_domestica MD17G1278700.v1.1
prunus_persica Prupe.3G007300_v2.0.a1
rosa_chinensis RchiOBHm_Chr3g0487071
rosa_laevigata RLG00000023035
rosa_multiflora Rmu_sc0005856.1_g000034
rosa_roxburghii Rroxscaffold_6G00395200
rosa_samantha Rh3BG315000 Rh3CG313400 Rh3DG310000
rosa_wichuraiana Rw3G024740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1217
AatII GACGTC 2 cut(s) 183, 882
Acc16I TGCGCA 1 cut(s) 5
Acc36I ACCTGC 2 cut(s) 340, 1217
AccBSI CCGCTC 1 cut(s) 453
AccII CGCG 2 cut(s) 314, 935
AciI CCGC 8 cut(s) 40, 370, 431, 453, 935, 1062, 1119, 1386
AclI AACGTT 2 cut(s) 576, 1085
AclWI GGATC 1 cut(s) 741
AcoI YGGCCR 1 cut(s) 767
AcsI RAATTY 2 cut(s) 716, 985
AcyI GRCGYC 2 cut(s) 180, 879
AfaI GTAC 6 cut(s) 52, 290, 306, 422, 701, 911
AfeI AGCGCT 1 cut(s) 408
AfiI CCNNNNNNNGG 2 cut(s) 1102, 1500
AflIII ACRYGT 2 cut(s) 312, 906
AgsI TTSAA 6 cut(s) 754, 789, 1130, 1178, 1326, 1407
AhlI ACTAGT 1 cut(s) 590
AjnI CCWGG 2 cut(s) 972, 1007
AloI GAACNNNNNNTCC 2 cut(s) 825, 857
AluBI AGCT 5 cut(s) 46, 446, 635, 1234, 1500
AluI AGCT 5 cut(s) 46, 446, 635, 1234, 1500
Alw21I GWGCWC 2 cut(s) 148, 1194
Alw26I GTCTC 7 cut(s) 74, 171, 301, 349, 490, 918, 1334
Alw44I GTGCAC 1 cut(s) 144
AlwI GGATC 1 cut(s) 741
AlwNI CAGNNNCTG 1 cut(s) 154
Ama87I CYCGRG 2 cut(s) 385, 847
Aor51HI AGCGCT 1 cut(s) 408
AoxI GGCC 3 cut(s) 219, 767, 1070
ApaLI GTGCAC 1 cut(s) 144
ApeKI GCWGC 2 cut(s) 62, 1349
ApoI RAATTY 2 cut(s) 716, 985
ArsI GACNNNNNNTTYG 2 cut(s) 970, 1002
AspLEI GCGC 4 cut(s) 6, 379, 409, 935
AspS9I GGNCC 1 cut(s) 151
AsuHPI GGTGA 3 cut(s) 610, 988, 1241
AsuII TTCGAA 1 cut(s) 1480
AvaI CYCGRG 2 cut(s) 385, 847
AvaII GGWCC 1 cut(s) 151
BaeGI GKGCMC 2 cut(s) 148, 326
BbsI GAAGAC 1 cut(s) 1463
Bbv12I GWGCWC 2 cut(s) 148, 1194
BbvI GCAGC 2 cut(s) 74, 1336
BccI CCATC 4 cut(s) 263, 551, 1117, 1389
BceAI ACGGC 2 cut(s) 344, 1432
BcgI CGANNNNNNTGC 6 cut(s) 1178, 1212, 1331, 1365, 1377, 1411
BciT130I CCWGG 2 cut(s) 974, 1009
BclI TGATCA 1 cut(s) 690
BcoDI GTCTC 7 cut(s) 74, 171, 301, 349, 490, 918, 1334
BcuI ACTAGT 1 cut(s) 590
BfaI CTAG 2 cut(s) 591, 1235
BfmI CTRYAG 1 cut(s) 1353
BfoI RGCGCY 2 cut(s) 380, 410
BfuAI ACCTGC 2 cut(s) 340, 1217
BisI GCNGC 3 cut(s) 63, 936, 1350
BlsI GCNGC 3 cut(s) 64, 937, 1351
BmcAI AGTACT 1 cut(s) 306
Bme1390I CCNGG 2 cut(s) 974, 1009
Bme18I GGWCC 1 cut(s) 151
BmeT110I CYCGRG 2 cut(s) 385, 847
BmgT120I GGNCC 1 cut(s) 151
BmrFI CCNGG 2 cut(s) 974, 1009
BmrI ACTGGG 1 cut(s) 1379
BmsI GCATC 7 cut(s) 86, 540, 715, 790, 861, 1254, 1452
BmuI ACTGGG 1 cut(s) 1379
BpiI GAAGAC 1 cut(s) 1463
Bpu14I TTCGAA 1 cut(s) 1480
Bsa29I ATCGAT 1 cut(s) 244
BsaAI YACGTR 1 cut(s) 703
BsaHI GRCGYC 2 cut(s) 180, 879
BsaI GGTCTC 1 cut(s) 349
BsaJI CCNNGG 1 cut(s) 962
BsaXI ACNNNNNCTCC 2 cut(s) 1213, 1243
Bsc4I CCNNNNNNNGG 2 cut(s) 1102, 1500
Bse118I RCCGGY 1 cut(s) 1493
Bse1I ACTGG 2 cut(s) 66, 1374
Bse3DI GCAATG 1 cut(s) 1298
BseBI CCWGG 2 cut(s) 974, 1009
BseCI ATCGAT 1 cut(s) 244
BseDI CCNNGG 1 cut(s) 962
BseLI CCNNNNNNNGG 2 cut(s) 1102, 1500
BseMI GCAATG 1 cut(s) 1298
BseMII CTCAG 1 cut(s) 557
BseNI ACTGG 2 cut(s) 66, 1374
BseRI GAGGAG 2 cut(s) 1052, 1440
BseSI GKGCMC 2 cut(s) 148, 326
BseXI GCAGC 2 cut(s) 74, 1336
BseYI CCCAGC 1 cut(s) 1500
Bsh1236I CGCG 2 cut(s) 314, 935
BshFI GGCC 3 cut(s) 221, 769, 1072
BshVI ATCGAT 1 cut(s) 244
BsiHKAI GWGCWC 2 cut(s) 148, 1194
BsiHKCI CYCGRG 2 cut(s) 385, 847
BsiSI CCGG 3 cut(s) 59, 1277, 1494
BslFI GGGAC 3 cut(s) 775, 846, 1386
BslI CCNNNNNNNGG 2 cut(s) 1102, 1500
BsmAI GTCTC 7 cut(s) 74, 171, 301, 349, 490, 918, 1334
BsmBI CGTCTC 1 cut(s) 171
BsmFI GGGAC 3 cut(s) 775, 846, 1386
BsmI GAATGC 2 cut(s) 1321, 1476
BsnI GGCC 3 cut(s) 221, 769, 1072
Bso31I GGTCTC 1 cut(s) 349
BsoBI CYCGRG 2 cut(s) 385, 847
Bsp119I TTCGAA 1 cut(s) 1480
Bsp1286I GDGCHC 3 cut(s) 148, 326, 1194
Bsp143I GATC 4 cut(s) 160, 690, 733, 953
BspACI CCGC 8 cut(s) 40, 370, 431, 453, 935, 1062, 1119, 1386
BspANI GGCC 3 cut(s) 221, 769, 1072
BspCNI CTCAG 1 cut(s) 556
BspDI ATCGAT 1 cut(s) 244
BspFNI CGCG 2 cut(s) 314, 935
BspMI ACCTGC 2 cut(s) 340, 1217
BspPI GGATC 1 cut(s) 741
BspT104I TTCGAA 1 cut(s) 1480
BspTNI GGTCTC 1 cut(s) 349
BsrBI CCGCTC 1 cut(s) 453
BsrDI GCAATG 1 cut(s) 1298
BsrFI RCCGGY 1 cut(s) 1493
BsrI ACTGG 2 cut(s) 66, 1374
BssAI RCCGGY 1 cut(s) 1493
BssECI CCNNGG 1 cut(s) 962
BssMI GATC 4 cut(s) 160, 690, 733, 953
BssNI GRCGYC 2 cut(s) 180, 879
BssT1I CCWWGG 1 cut(s) 962
Bst2UI CCWGG 2 cut(s) 974, 1009
Bst4CI ACNGT 3 cut(s) 295, 550, 685
BstACI GRCGYC 2 cut(s) 180, 879
BstBAI YACGTR 1 cut(s) 703
BstBI TTCGAA 1 cut(s) 1480
BstC8I GCNNGC 5 cut(s) 44, 433, 637, 1201, 1319
BstDEI CTNAG 1 cut(s) 543
BstFNI CGCG 2 cut(s) 314, 935
BstH2I RGCGCY 2 cut(s) 380, 410
BstHHI GCGC 4 cut(s) 6, 379, 409, 935
BstKTI GATC 4 cut(s) 163, 693, 736, 956
BstMAI GTCTC 7 cut(s) 74, 171, 301, 349, 490, 918, 1334
BstMBI GATC 4 cut(s) 160, 690, 733, 953
BstMWI GCNNNNNNNGC 4 cut(s) 52, 1028, 1273, 1385
BstNI CCWGG 2 cut(s) 974, 1009
BstNSI RCATGY 4 cut(s) 807, 910, 1314, 1379
BstSCI CCNGG 2 cut(s) 972, 1007
BstSFI CTRYAG 1 cut(s) 1353
BstSLI GKGCMC 2 cut(s) 148, 326
BstUI CGCG 2 cut(s) 314, 935
BstV1I GCAGC 2 cut(s) 74, 1336
BstV2I GAAGAC 1 cut(s) 1463
BstX2I RGATCY 1 cut(s) 733
BstYI RGATCY 1 cut(s) 733
Bsu15I ATCGAT 1 cut(s) 244
BsuRI GGCC 3 cut(s) 221, 769, 1072
BsuTUI ATCGAT 1 cut(s) 244
BtsIMutI CAGTG 3 cut(s) 291, 480, 700
BveI ACCTGC 2 cut(s) 340, 1217
Cac8I GCNNGC 5 cut(s) 44, 433, 637, 1201, 1319
CaiI CAGNNNCTG 1 cut(s) 154
CfoI GCGC 4 cut(s) 6, 379, 409, 935
Cfr10I RCCGGY 1 cut(s) 1493
Cfr13I GGNCC 1 cut(s) 151
ClaI ATCGAT 1 cut(s) 244
CseI GACGC 2 cut(s) 1408, 1429
CsiI ACCWGGT 1 cut(s) 972
Csp6I GTAC 6 cut(s) 51, 289, 305, 421, 700, 910
CviQI GTAC 6 cut(s) 51, 289, 305, 421, 700, 910
DdeI CTNAG 1 cut(s) 543
DpnI GATC 4 cut(s) 162, 692, 735, 955
DpnII GATC 4 cut(s) 160, 690, 733, 953
EaeI YGGCCR 1 cut(s) 767
Eco130I CCWWGG 1 cut(s) 962
Eco147I AGGCCT 1 cut(s) 1072
Eco31I GGTCTC 1 cut(s) 349
Eco47I GGWCC 1 cut(s) 151
Eco47III AGCGCT 1 cut(s) 408
Eco88I CYCGRG 2 cut(s) 385, 847
EcoO109I RGGNCCY 1 cut(s) 151
EcoRI GAATTC 1 cut(s) 985
EcoRII CCWGG 2 cut(s) 972, 1007
EcoT14I CCWWGG 1 cut(s) 962
EcoT22I ATGCAT 2 cut(s) 805, 947
ErhI CCWWGG 1 cut(s) 962
Esp3I CGTCTC 1 cut(s) 171
FaqI GGGAC 3 cut(s) 775, 846, 1386
FauI CCCGC 3 cut(s) 424, 1112, 1393
FbaI TGATCA 1 cut(s) 690
Fnu4HI GCNGC 3 cut(s) 63, 936, 1350
Fsp4HI GCNGC 3 cut(s) 63, 936, 1350
FspBI CTAG 2 cut(s) 591, 1235
FspI TGCGCA 1 cut(s) 5
GlaI GCGC 4 cut(s) 5, 378, 408, 934
GluI GCNGC 3 cut(s) 63, 936, 1350
GsaI CCCAGC 1 cut(s) 1504
HaeII RGCGCY 2 cut(s) 380, 410
HaeIII GGCC 3 cut(s) 221, 769, 1072
HapII CCGG 3 cut(s) 59, 1277, 1494
HgaI GACGC 2 cut(s) 1408, 1429
HhaI GCGC 4 cut(s) 6, 379, 409, 935
Hin1I GRCGYC 2 cut(s) 180, 879
Hin6I GCGC 4 cut(s) 4, 377, 407, 933
HinP1I GCGC 4 cut(s) 4, 377, 407, 933
HincII GTYRAC 4 cut(s) 628, 891, 904, 1210
HindII GTYRAC 4 cut(s) 628, 891, 904, 1210
HinfI GANTC 5 cut(s) 273, 763, 1017, 1411, 1508
HpaI GTTAAC 1 cut(s) 628
HpaII CCGG 3 cut(s) 59, 1277, 1494
HphI GGTGA 3 cut(s) 610, 988, 1241
Hpy166II GTNNAC 9 cut(s) 146, 291, 588, 628, 844, 891, 904, 1093, 1210
Hpy188I TCNGA 5 cut(s) 278, 546, 953, 1047, 1172
Hpy188III TCNNGA 2 cut(s) 298, 1331
Hpy8I GTNNAC 9 cut(s) 146, 291, 588, 628, 844, 891, 904, 1093, 1210
Hpy99I CGWCG 2 cut(s) 185, 1402
HpyAV CCTTC 2 cut(s) 211, 472
HpyCH4III ACNGT 3 cut(s) 295, 550, 685
HpyCH4IV ACGT 5 cut(s) 180, 576, 702, 879, 1085
HpyF10VI GCNNNNNNNGC 4 cut(s) 52, 1028, 1273, 1385
HpyF3I CTNAG 1 cut(s) 543
HpySE526I ACGT 5 cut(s) 180, 576, 702, 879, 1085
Hsp92I GRCGYC 2 cut(s) 180, 879
HspAI GCGC 4 cut(s) 4, 377, 407, 933
Ksp22I TGATCA 1 cut(s) 690
KspAI GTTAAC 1 cut(s) 628
Kzo9I GATC 4 cut(s) 160, 690, 733, 953
LmnI GCTCC 2 cut(s) 30, 1427
Lsp1109I GCAGC 2 cut(s) 74, 1336
LweI GCATC 7 cut(s) 86, 540, 715, 790, 861, 1254, 1452
MabI ACCWGGT 1 cut(s) 972
MaeI CTAG 2 cut(s) 591, 1235
MaeII ACGT 5 cut(s) 180, 576, 702, 879, 1085
MaeIII GTNAC 4 cut(s) 98, 512, 976, 1081
MalI GATC 4 cut(s) 162, 692, 735, 955
MbiI CCGCTC 1 cut(s) 453
MboI GATC 4 cut(s) 160, 690, 733, 953
MboII GAAGA 2 cut(s) 810, 1468
MflI RGATCY 1 cut(s) 733
MhlI GDGCHC 3 cut(s) 148, 326, 1194
MluCI AATT 4 cut(s) 521, 716, 985, 1359
MluI ACGCGT 1 cut(s) 312
MlyI GAGTC 2 cut(s) 757, 1011
MmeI TCCRAC 2 cut(s) 546, 777
Mph1103I ATGCAT 2 cut(s) 805, 947
MseI TTAA 6 cut(s) 240, 333, 627, 746, 857, 1149
MspI CCGG 3 cut(s) 59, 1277, 1494
MspR9I CCNGG 2 cut(s) 974, 1009
Mva1269I GAATGC 2 cut(s) 1321, 1476
MvaI CCWGG 2 cut(s) 974, 1009
MvnI CGCG 2 cut(s) 314, 935
MwoI GCNNNNNNNGC 4 cut(s) 52, 1028, 1273, 1385
NdeII GATC 4 cut(s) 160, 690, 733, 953
NmeAIII GCCGAG 2 cut(s) 745, 1270
NmuCI GTSAC 1 cut(s) 976
NsbI TGCGCA 1 cut(s) 5
NsiI ATGCAT 2 cut(s) 805, 947
NspI RCATGY 4 cut(s) 807, 910, 1314, 1379
NspV TTCGAA 1 cut(s) 1480
PaeR7I CTCGAG 2 cut(s) 385, 847
PaqCI CACCTGC 1 cut(s) 1217
PceI AGGCCT 1 cut(s) 1072
PciI ACATGT 1 cut(s) 906
PcsI WCGNNNNNNNCGW 1 cut(s) 1338
PctI GAATGC 2 cut(s) 1321, 1476
PfeI GAWTC 3 cut(s) 273, 1411, 1508
PkrI GCNGC 3 cut(s) 64, 937, 1351
PleI GAGTC 2 cut(s) 757, 1011
PpsI GAGTC 2 cut(s) 757, 1011
Ppu21I YACGTR 1 cut(s) 703
PpuMI RGGWCCY 1 cut(s) 151
PscI ACATGT 1 cut(s) 906
Psp1406I AACGTT 2 cut(s) 576, 1085
Psp5II RGGWCCY 1 cut(s) 151
Psp6I CCWGG 2 cut(s) 972, 1007
PspFI CCCAGC 1 cut(s) 1500
PspGI CCWGG 2 cut(s) 972, 1007
PspPI GGNCC 1 cut(s) 151
PspPPI RGGWCCY 1 cut(s) 151
PspXI VCTCGAGB 2 cut(s) 385, 847
PstNI CAGNNNCTG 1 cut(s) 154
PsuI RGATCY 1 cut(s) 733
RsaI GTAC 6 cut(s) 52, 290, 306, 422, 701, 911
RsaNI GTAC 6 cut(s) 51, 289, 305, 421, 700, 910
SaqAI TTAA 6 cut(s) 240, 333, 627, 746, 857, 1149
SatI GCNGC 3 cut(s) 63, 936, 1350
Sau3AI GATC 4 cut(s) 160, 690, 733, 953
Sau96I GGNCC 1 cut(s) 151
ScaI AGTACT 1 cut(s) 306
SchI GAGTC 2 cut(s) 757, 1011
ScrFI CCNGG 2 cut(s) 974, 1009
SduI GDGCHC 3 cut(s) 148, 326, 1194
SexAI ACCWGGT 1 cut(s) 972
SfaNI GCATC 7 cut(s) 86, 540, 715, 790, 861, 1254, 1452
SfcI CTRYAG 1 cut(s) 1353
Sfr274I CTCGAG 2 cut(s) 385, 847
SfuI TTCGAA 1 cut(s) 1480
SinI GGWCC 1 cut(s) 151
SlaI CTCGAG 2 cut(s) 385, 847
SmlI CTYRAG 2 cut(s) 385, 847
SmoI CTYRAG 2 cut(s) 385, 847
SpeI ACTAGT 1 cut(s) 590
Sse9I AATT 4 cut(s) 521, 716, 985, 1359
SseBI AGGCCT 1 cut(s) 1072
SsiI CCGC 8 cut(s) 40, 370, 431, 453, 935, 1062, 1119, 1386
SspMI CTAG 2 cut(s) 591, 1235
StuI AGGCCT 1 cut(s) 1072
StyD4I CCNGG 2 cut(s) 972, 1007
StyI CCWWGG 1 cut(s) 962
TaaI ACNGT 3 cut(s) 295, 550, 685
TaiI ACGT 5 cut(s) 183, 579, 705, 882, 1088
TaqII GACCGA 1 cut(s) 1070
TasI AATT 4 cut(s) 521, 716, 985, 1359
TatI WGTACW 2 cut(s) 288, 304
TauI GCSGC 1 cut(s) 938
TfiI GAWTC 3 cut(s) 273, 1411, 1508
Tru1I TTAA 6 cut(s) 240, 333, 627, 746, 857, 1149
Tru9I TTAA 6 cut(s) 240, 333, 627, 746, 857, 1149
TscAI CASTG 3 cut(s) 298, 480, 700
TseFI GTSAC 1 cut(s) 976
TseI GCWGC 2 cut(s) 62, 1349
Tsp45I GTSAC 1 cut(s) 976
TspDTI ATGAA 4 cut(s) 344, 428, 666, 1172
TspGWI ACGGA 2 cut(s) 249, 1029
TspRI CASTG 3 cut(s) 298, 480, 700
VneI GTGCAC 1 cut(s) 144
VpaK11BI GGWCC 1 cut(s) 151
XapI RAATTY 2 cut(s) 716, 985
XceI RCATGY 4 cut(s) 807, 910, 1314, 1379
XhoI CTCGAG 2 cut(s) 385, 847
XspI CTAG 2 cut(s) 591, 1235
ZraI GACGTC 2 cut(s) 181, 880
ZrmI AGTACT 1 cut(s) 306
Zsp2I ATGCAT 2 cut(s) 805, 947
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.