Photosystem I reaction center subunit II
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G03130 AT4G02770 |
| fragaria_vesca | FvH4_4g15260 |
| malus_domestica | MD13G1191300.v1.1 MD16G1191400.v1.1 |
| prunus_persica | Prupe.1G011500_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr4g0416571 |
| rosa_laevigata | RLG00000007973 |
| rosa_multiflora | Rmu_sc0003722.1_g000040 |
| rosa_roxburghii | Rroxscaffold_5G00360450 |
| rosa_rugosa | Rorug04G0143000 |
| rosa_samantha | Rh4AG205400 Rh4BG203000 Rh4CG216300 Rh4DG202500 |
| rosa_wichuraiana | Rw0G013510 Rw4G017390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 187, 549 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 257, 518 |
| AclWI | GGATC | 1 cut(s) | 164 |
| AcoI | YGGCCR | 3 cut(s) | 3, 402, 562 |
| AcuI | CTGAAG | 1 cut(s) | 556 |
| AcyI | GRCGYC | 2 cut(s) | 188, 550 |
| AfaI | GTAC | 2 cut(s) | 452, 464 |
| AfeI | AGCGCT | 1 cut(s) | 68 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 257, 359, 375, 490, 518, 535, 604 |
| AgsI | TTSAA | 1 cut(s) | 500 |
| AjnI | CCWGG | 3 cut(s) | 291, 404, 544 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 287, 319 |
| AluBI | AGCT | 1 cut(s) | 130 |
| AluI | AGCT | 1 cut(s) | 130 |
| Alw26I | GTCTC | 1 cut(s) | 330 |
| AlwI | GGATC | 1 cut(s) | 164 |
| Aor51HI | AGCGCT | 1 cut(s) | 68 |
| AoxI | GGCC | 4 cut(s) | 3, 111, 402, 562 |
| ApeKI | GCWGC | 4 cut(s) | 164, 167, 264, 365 |
| AspLEI | GCGC | 3 cut(s) | 69, 190, 552 |
| AspS9I | GGNCC | 2 cut(s) | 112, 383 |
| AsuHPI | GGTGA | 4 cut(s) | 22, 208, 240, 550 |
| AvaII | GGWCC | 1 cut(s) | 383 |
| BalI | TGGCCA | 3 cut(s) | 5, 404, 564 |
| BanI | GGYRCC | 2 cut(s) | 187, 549 |
| BbvCI | CCTCAGC | 2 cut(s) | 43, 440 |
| BbvI | GCAGC | 4 cut(s) | 176, 179, 276, 377 |
| BccI | CCATC | 2 cut(s) | 253, 512 |
| BciT130I | CCWGG | 3 cut(s) | 293, 406, 546 |
| BclI | TGATCA | 1 cut(s) | 312 |
| BcoDI | GTCTC | 1 cut(s) | 330 |
| BfoI | RGCGCY | 3 cut(s) | 70, 191, 553 |
| BisI | GCNGC | 4 cut(s) | 165, 168, 265, 366 |
| BlsI | GCNGC | 4 cut(s) | 166, 169, 266, 367 |
| Bme1390I | CCNGG | 3 cut(s) | 293, 406, 546 |
| Bme18I | GGWCC | 1 cut(s) | 383 |
| BmgT120I | GGNCC | 2 cut(s) | 112, 383 |
| BmiI | GGNNCC | 5 cut(s) | 114, 189, 204, 384, 551 |
| BmrFI | CCNGG | 3 cut(s) | 293, 406, 546 |
| BmsI | GCATC | 1 cut(s) | 339 |
| BpmI | CTGGAG | 2 cut(s) | 189, 378 |
| Bpu10I | CCTNAGC | 2 cut(s) | 43, 440 |
| BpuEI | CTTGAG | 1 cut(s) | 110 |
| BsaHI | GRCGYC | 2 cut(s) | 188, 550 |
| BsaJI | CCNNGG | 6 cut(s) | 6, 80, 291, 544, 545, 553 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 257, 359, 375, 490, 518, 535, 604 |
| Bse1I | ACTGG | 5 cut(s) | 206, 361, 405, 466, 622 |
| BseBI | CCWGG | 3 cut(s) | 293, 406, 546 |
| BseDI | CCNNGG | 6 cut(s) | 6, 80, 291, 544, 545, 553 |
| BseGI | GGATG | 1 cut(s) | 523 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 257, 359, 375, 490, 518, 535, 604 |
| BseMII | CTCAG | 3 cut(s) | 57, 431, 522 |
| BseNI | ACTGG | 5 cut(s) | 206, 361, 405, 466, 622 |
| BseRI | GAGGAG | 3 cut(s) | 91, 124, 375 |
| BseXI | GCAGC | 4 cut(s) | 176, 179, 276, 377 |
| BshFI | GGCC | 4 cut(s) | 5, 113, 404, 564 |
| BshNI | GGYRCC | 2 cut(s) | 187, 549 |
| BslFI | GGGAC | 2 cut(s) | 62, 445 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 257, 359, 375, 490, 518, 535, 604 |
| BsmAI | GTCTC | 1 cut(s) | 330 |
| BsmFI | GGGAC | 2 cut(s) | 62, 445 |
| BsnI | GGCC | 4 cut(s) | 5, 113, 404, 564 |
| Bsp143I | GATC | 3 cut(s) | 156, 312, 456 |
| Bsp19I | CCATGG | 2 cut(s) | 6, 80 |
| BspANI | GGCC | 4 cut(s) | 5, 113, 404, 564 |
| BspCNI | CTCAG | 3 cut(s) | 56, 432, 523 |
| BspLI | GGNNCC | 5 cut(s) | 114, 189, 204, 384, 551 |
| BspPI | GGATC | 1 cut(s) | 164 |
| BspT107I | GGYRCC | 2 cut(s) | 187, 549 |
| BsrI | ACTGG | 5 cut(s) | 206, 361, 405, 466, 622 |
| BssECI | CCNNGG | 6 cut(s) | 6, 80, 291, 544, 545, 553 |
| BssMI | GATC | 3 cut(s) | 156, 312, 456 |
| BssNI | GRCGYC | 2 cut(s) | 188, 550 |
| BssT1I | CCWWGG | 3 cut(s) | 6, 80, 553 |
| Bst2UI | CCWGG | 3 cut(s) | 293, 406, 546 |
| Bst4CI | ACNGT | 2 cut(s) | 76, 184 |
| Bst6I | CTCTTC | 3 cut(s) | 32, 168, 294 |
| BstACI | GRCGYC | 2 cut(s) | 188, 550 |
| BstC8I | GCNNGC | 1 cut(s) | 623 |
| BstDEI | CTNAG | 3 cut(s) | 43, 440, 531 |
| BstDSI | CCRYGG | 2 cut(s) | 6, 80 |
| BstF5I | GGATG | 1 cut(s) | 523 |
| BstH2I | RGCGCY | 3 cut(s) | 70, 191, 553 |
| BstHHI | GCGC | 3 cut(s) | 69, 190, 552 |
| BstKTI | GATC | 3 cut(s) | 159, 315, 459 |
| BstMAI | GTCTC | 1 cut(s) | 330 |
| BstMBI | GATC | 3 cut(s) | 156, 312, 456 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 17, 66, 127 |
| BstNI | CCWGG | 3 cut(s) | 293, 406, 546 |
| BstSCI | CCNGG | 3 cut(s) | 291, 404, 544 |
| BstV1I | GCAGC | 4 cut(s) | 176, 179, 276, 377 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 560 |
| BsuRI | GGCC | 4 cut(s) | 5, 113, 404, 564 |
| BtgI | CCRYGG | 2 cut(s) | 6, 80 |
| BtsCI | GGATG | 1 cut(s) | 523 |
| BtsI | GCAGTG | 1 cut(s) | 422 |
| BtsIMutI | CAGTG | 5 cut(s) | 72, 99, 213, 422, 615 |
| Cac8I | GCNNGC | 1 cut(s) | 623 |
| CfoI | GCGC | 3 cut(s) | 69, 190, 552 |
| Cfr13I | GGNCC | 2 cut(s) | 112, 383 |
| Csp6I | GTAC | 2 cut(s) | 451, 463 |
| CviAII | CATG | 5 cut(s) | 7, 81, 109, 151, 318 |
| CviQI | GTAC | 2 cut(s) | 451, 463 |
| DdeI | CTNAG | 3 cut(s) | 43, 440, 531 |
| DinI | GGCGCC | 2 cut(s) | 189, 551 |
| DpnI | GATC | 3 cut(s) | 158, 314, 458 |
| DpnII | GATC | 3 cut(s) | 156, 312, 456 |
| EaeI | YGGCCR | 3 cut(s) | 3, 402, 562 |
| Eam1104I | CTCTTC | 3 cut(s) | 32, 168, 294 |
| EarI | CTCTTC | 3 cut(s) | 32, 168, 294 |
| Eco130I | CCWWGG | 3 cut(s) | 6, 80, 553 |
| Eco47I | GGWCC | 1 cut(s) | 383 |
| Eco47III | AGCGCT | 1 cut(s) | 68 |
| Eco57I | CTGAAG | 1 cut(s) | 556 |
| EcoO109I | RGGNCCY | 1 cut(s) | 383 |
| EcoRII | CCWGG | 3 cut(s) | 291, 404, 544 |
| EcoT14I | CCWWGG | 3 cut(s) | 6, 80, 553 |
| EgeI | GGCGCC | 2 cut(s) | 189, 551 |
| EheI | GGCGCC | 2 cut(s) | 189, 551 |
| ErhI | CCWWGG | 3 cut(s) | 6, 80, 553 |
| FaeI | CATG | 5 cut(s) | 10, 84, 112, 154, 321 |
| FaqI | GGGAC | 2 cut(s) | 62, 445 |
| FatI | CATG | 5 cut(s) | 6, 80, 108, 150, 317 |
| FbaI | TGATCA | 1 cut(s) | 312 |
| Fnu4HI | GCNGC | 4 cut(s) | 165, 168, 265, 366 |
| FokI | GGATG | 1 cut(s) | 530 |
| Fsp4HI | GCNGC | 4 cut(s) | 165, 168, 265, 366 |
| GlaI | GCGC | 3 cut(s) | 68, 189, 551 |
| GluI | GCNGC | 4 cut(s) | 165, 168, 265, 366 |
| GsuI | CTGGAG | 2 cut(s) | 189, 378 |
| HaeII | RGCGCY | 3 cut(s) | 70, 191, 553 |
| HaeIII | GGCC | 4 cut(s) | 5, 113, 404, 564 |
| HhaI | GCGC | 3 cut(s) | 69, 190, 552 |
| Hin1I | GRCGYC | 2 cut(s) | 188, 550 |
| Hin1II | CATG | 5 cut(s) | 10, 84, 112, 154, 321 |
| Hin6I | GCGC | 3 cut(s) | 67, 188, 550 |
| HinP1I | GCGC | 3 cut(s) | 67, 188, 550 |
| HinfI | GANTC | 1 cut(s) | 323 |
| HphI | GGTGA | 4 cut(s) | 22, 208, 240, 550 |
| Hpy166II | GTNNAC | 4 cut(s) | 526, 541, 595, 615 |
| Hpy8I | GTNNAC | 4 cut(s) | 526, 541, 595, 615 |
| HpyAV | CCTTC | 2 cut(s) | 115, 529 |
| HpyCH4III | ACNGT | 2 cut(s) | 76, 184 |
| HpyCH4V | TGCA | 2 cut(s) | 164, 508 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 17, 66, 127 |
| HpyF3I | CTNAG | 3 cut(s) | 43, 440, 531 |
| Hsp92I | GRCGYC | 2 cut(s) | 188, 550 |
| Hsp92II | CATG | 5 cut(s) | 10, 84, 112, 154, 321 |
| HspAI | GCGC | 3 cut(s) | 67, 188, 550 |
| KasI | GGCGCC | 2 cut(s) | 187, 549 |
| Ksp22I | TGATCA | 1 cut(s) | 312 |
| Kzo9I | GATC | 3 cut(s) | 156, 312, 456 |
| LmnI | GCTCC | 4 cut(s) | 74, 208, 334, 362 |
| Lsp1109I | GCAGC | 4 cut(s) | 176, 179, 276, 377 |
| LweI | GCATC | 1 cut(s) | 339 |
| MalI | GATC | 3 cut(s) | 158, 314, 458 |
| MboI | GATC | 3 cut(s) | 156, 312, 456 |
| MboII | GAAGA | 5 cut(s) | 19, 185, 308, 311, 598 |
| MfeI | CAATTG | 1 cut(s) | 600 |
| MlsI | TGGCCA | 3 cut(s) | 5, 404, 564 |
| MluCI | AATT | 2 cut(s) | 388, 600 |
| MluNI | TGGCCA | 3 cut(s) | 5, 404, 564 |
| Mly113I | GGCGCC | 2 cut(s) | 188, 550 |
| MlyI | GAGTC | 1 cut(s) | 332 |
| Mox20I | TGGCCA | 3 cut(s) | 5, 404, 564 |
| MscI | TGGCCA | 3 cut(s) | 5, 404, 564 |
| Msp20I | TGGCCA | 3 cut(s) | 5, 404, 564 |
| MspR9I | CCNGG | 3 cut(s) | 293, 406, 546 |
| MunI | CAATTG | 1 cut(s) | 600 |
| MvaI | CCWGG | 3 cut(s) | 293, 406, 546 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 17, 66, 127 |
| NarI | GGCGCC | 2 cut(s) | 188, 550 |
| NcoI | CCATGG | 2 cut(s) | 6, 80 |
| NdeII | GATC | 3 cut(s) | 156, 312, 456 |
| NlaIII | CATG | 5 cut(s) | 10, 84, 112, 154, 321 |
| NlaIV | GGNNCC | 5 cut(s) | 114, 189, 204, 384, 551 |
| PasI | CCCWGGG | 1 cut(s) | 545 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 257, 518 |
| PkrI | GCNGC | 4 cut(s) | 166, 169, 266, 367 |
| PleI | GAGTC | 1 cut(s) | 331 |
| PluTI | GGCGCC | 2 cut(s) | 191, 553 |
| PpsI | GAGTC | 1 cut(s) | 331 |
| PpuMI | RGGWCCY | 1 cut(s) | 383 |
| Psp5II | RGGWCCY | 1 cut(s) | 383 |
| Psp6I | CCWGG | 3 cut(s) | 291, 404, 544 |
| PspGI | CCWGG | 3 cut(s) | 291, 404, 544 |
| PspN4I | GGNNCC | 5 cut(s) | 114, 189, 204, 384, 551 |
| PspPI | GGNCC | 2 cut(s) | 112, 383 |
| PspPPI | RGGWCCY | 1 cut(s) | 383 |
| RsaI | GTAC | 2 cut(s) | 452, 464 |
| RsaNI | GTAC | 2 cut(s) | 451, 463 |
| SatI | GCNGC | 4 cut(s) | 165, 168, 265, 366 |
| Sau3AI | GATC | 3 cut(s) | 156, 312, 456 |
| Sau96I | GGNCC | 2 cut(s) | 112, 383 |
| SchI | GAGTC | 1 cut(s) | 332 |
| ScrFI | CCNGG | 3 cut(s) | 293, 406, 546 |
| SetI | ASST | 6 cut(s) | 132, 446, 498, 540, 578, 609 |
| SfaNI | GCATC | 1 cut(s) | 339 |
| SfoI | GGCGCC | 2 cut(s) | 189, 551 |
| SinI | GGWCC | 1 cut(s) | 383 |
| SmlI | CTYRAG | 1 cut(s) | 125 |
| SmoI | CTYRAG | 1 cut(s) | 125 |
| Sse9I | AATT | 2 cut(s) | 388, 600 |
| SspDI | GGCGCC | 2 cut(s) | 187, 549 |
| SspI | AATATT | 1 cut(s) | 503 |
| StyD4I | CCNGG | 3 cut(s) | 291, 404, 544 |
| StyI | CCWWGG | 3 cut(s) | 6, 80, 553 |
| TaaI | ACNGT | 2 cut(s) | 76, 184 |
| TaqI | TCGA | 1 cut(s) | 231 |
| TasI | AATT | 2 cut(s) | 388, 600 |
| TatI | WGTACW | 1 cut(s) | 450 |
| TscAI | CASTG | 5 cut(s) | 79, 99, 213, 422, 622 |
| TseI | GCWGC | 4 cut(s) | 164, 167, 264, 365 |
| TspDTI | ATGAA | 1 cut(s) | 97 |
| TspRI | CASTG | 5 cut(s) | 79, 99, 213, 422, 622 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 257, 518 |
| VpaK11BI | GGWCC | 1 cut(s) | 383 |